miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00844;mir-67;AAJJ01001473.1/10807-10747 7070:Tribolium
castaneum (red flour beetle)
Length = 61
Score = 121 bits (61), Expect = 1e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 4 gactcactcaacctgggtgtgatgtgtttgctgtaccatcacaacctccttgagtgagcg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactcactcaacctgggtgtgatgtgtttgctgtaccatcacaacctccttgagtgagcg 60
Query: 64 a 64
|
Sbjct: 61 a 61
>RF00844;mir-67;ABKP02019157.1/49006-49065 377271:Anopheles
gambiae M
Length = 60
Score = 63.9 bits (32), Expect = 2e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 actcactcaacctgggtgtgatgtgtttgctgtaccatcacaacctccttgagtgagcga 64
||||||||||||||||||||||| ||| || | |||||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatgcttttt-tgaatcatcacaacctccttgagtgagcga 60
>RF00844;mir-67;AAPU01010253.1/29382-29448 7230:Drosophila
mojavensis
Length = 67
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 39 ccatcacaacctccttgagtgagcga 64
||||||||||||||||||||||||||
Sbjct: 42 ccatcacaacctccttgagtgagcga 67
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 4 gactcactcaacctgggtgtgatgt 28
|||||||||||||||||||||||||
Sbjct: 1 gactcactcaacctgggtgtgatgt 25
>RF00844;mir-67;AADG05000205.1/41347-41272 7460:Apis mellifera
(honey bee)
Length = 76
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 gactcactcaacctgggtgtgatg 27
||||||||||||||||||||||||
Sbjct: 1 gactcactcaacctgggtgtgatg 24
>RF00844;mir-67;AAZX01010522.1/11245-11164 7425:Nasonia
vitripennis (jewel wasp)
Length = 82
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 actcactcaacctgggtgtgatg 27
|||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatg 24
>RF00844;mir-67;ABJB010869367.1/2416-2352 6945:Ixodes scapularis
(black-legged tick)
Length = 65
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 ccatcacaacctccttgagtgag 61
|||||||||||||||||||||||
Sbjct: 40 ccatcacaacctccttgagtgag 62
>RF00844;mir-67;ABLF01022849.1/7851-7790 7029:Acyrthosiphon pisum
(pea aphid)
Length = 62
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 cacaacctccttgagtgagcga 64
||||||||||||||||||||||
Sbjct: 41 cacaacctccttgagtgagcga 62
>RF00844;mir-67;AAZO01000007.1/12339-12398 121224:Pediculus
humanus corporis (human body louse)
Length = 60
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 cacaacctccttgagtgagcg 63
|||||||||||||||||||||
Sbjct: 39 cacaacctccttgagtgagcg 59
