miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00947;mir-929;AAJJ01001068.1/14929-15025 7070:Tribolium castaneum
(red flour beetle)
Length = 97
Score = 190 bits (96), Expect = 2e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 8 catcttaatcggggtcaaattgactctagtagggagtccgttactttatagcgactccct 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcttaatcggggtcaaattgactctagtagggagtccgttactttatagcgactccct 60
Query: 68 aacggagtcaggttgactccctttgagggaaatcta 103
||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacggagtcaggttgactccctttgagggaaatcta 96
>RF00947;mir-929;AAPU01011179.1/143817-143911 7230:Drosophila
mojavensis
Length = 95
Score = 69.9 bits (35), Expect = 6e-12
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| || ||| || |||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtccttt--tttttaacgactccctaacggagtcagatt 72
Query: 82 ga 83
||
Sbjct: 73 ga 74
>RF00947;mir-929;AAQB01008629.1/27335-27241 7260:Drosophila
willistoni
Length = 95
Score = 67.9 bits (34), Expect = 2e-11
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtccttta-tata-agcgactccctaacggagtcagatt 72
Query: 82 ga 83
||
Sbjct: 73 ga 74
>RF00947;mir-929;AABU01002551.1/121293-121386 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 63.9 bits (32), Expect = 4e-10
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtcctttaat---gagcgactccctaacggagtcagatt 71
Query: 82 ga 83
||
Sbjct: 72 ga 73
>RF00947;mir-929;AAFS01002785.1/3282-3188 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
||||||||||||||||||||||||| || | | |||||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtccttt--tattgagcgactccctaacggagtcagatt 72
Query: 82 ga 83
||
Sbjct: 73 ga 74
>RF00947;mir-929;AAZX01003135.1/832-932 7425:Nasonia vitripennis
(jewel wasp)
Length = 101
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 ggggtcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||||||
Sbjct: 11 ggggtcaaattgactctagtagggagtcc 39
>RF00947;mir-929;AADG05005366.1/7427-7326 7460:Apis mellifera
(honey bee)
Length = 102
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 ggggtcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||||||
Sbjct: 11 ggggtcaaattgactctagtagggagtcc 39
>RF00947;mir-929;AAZO01002930.1/51339-51440 121224:Pediculus
humanus corporis (human body louse)
Length = 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 tcggggtcaaattgactctagtagggagtcc 46
|||| ||||||||||||||||||||||||||
Sbjct: 9 tcggtgtcaaattgactctagtagggagtcc 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 gcgactccctaacggagtcaggttgactcc 87
||||||||||||||||||||| ||||||||
Sbjct: 56 gcgactccctaacggagtcagattgactcc 85
>RF00947;mir-929;BAAB01013302.1/660-751 7091:Bombyx mori (domestic
silkworm)
Length = 92
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccgtt 49
||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccgtt 42
>RF00947;mir-929;ABKP02012769.1/7854-7759 377271:Anopheles gambiae
M
Length = 96
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccgttacttta-tagcgactccctaacggagtcaggttg 82
||||||||||||||||||||||| || | || |||||||||||||||||||||| |||
Sbjct: 17 aaattgactctagtagggagtccttt--tatacgagcgactccctaacggagtcagattg 74
Query: 83 a 83
|
Sbjct: 75 a 75
>RF00947;mir-929;AAAB01008089.1/34548-34645 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccgttacttta-tagcgactccctaacggagtcaggttg 82
||||||||||||||||||||||| || | || |||||||||||||||||||||| |||
Sbjct: 17 aaattgactctagtagggagtccttt--tatacgagcgactccctaacggagtcagattg 74
Query: 83 a 83
|
Sbjct: 75 a 75
>RF00947;mir-929;AANI01014363.1/204913-205006 7244:Drosophila
virilis
Length = 94
Score = 52.0 bits (26), Expect = 1e-06
Identities = 55/63 (87%), Gaps = 5/63 (7%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccgtt-actttatagcgactccctaacggagtcaggt 80
||||||||||||||||||||||||| || || |||||||||||||||||||||| |
Sbjct: 15 tcaaattgactctagtagggagtcctttcac----gagcgactccctaacggagtcagat 70
Query: 81 tga 83
|||
Sbjct: 71 tga 73
>RF00947;mir-929;ABLF01011736.1/10860-10764 7029:Acyrthosiphon
pisum (pea aphid)
Length = 97
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39
>RF00947;mir-929;AAWU01005610.1/5708-5613 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtcc 46
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
>RF00947;mir-929;AAGE02012461.1/76734-76639 7159:Aedes aegypti
(yellow fever mosquito)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtcc 46
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
