miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AAAA02011203.1/5191-5426 39946:Oryza sativa Indica
Group
Length = 236
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa-tatatttgacagttt 82
||||| |||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||
Sbjct: 235 tactcgctccgtccctatatatttaataccgttaaattttttaaatatatttgactgttt 176
Query: 83 atcttatt 90
||||||||
Sbjct: 175 atcttatt 168
>RF01058;MIR806;AAAA02002675.1/17336-17575 39946:Oryza sativa Indica
Group
Length = 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaa-tttttttaatatatttgacagttt 82
|||||||||||| |||| ||||||||| ||||||| |||||| |||||||||||| |||
Sbjct: 239 tactccctccgtccctacatatttaacgccgttaacttttttaaatatatttgaccgttc 180
Query: 83 atcttatt 90
|||||||
Sbjct: 179 gtcttatt 172
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 60.0 bits (30), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttt 64
|||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 2 tactccctccgttcctaaatatttaacaccgttaatttttt 42
>RF01058;MIR806;AP008209.1/757462-757700 39947:Oryza sativa
Japonica Group
Length = 239
Score = 60.0 bits (30), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaatatat 72
|||||||||||| ||| ||||||||| |||||||||||||||| ||||
Sbjct: 2 tactccctccgtttctaaatatttaacgccgttaatttttttaaaatat 50
>RF01058;MIR806;AAAA02026041.1/22149-21912 39946:Oryza sativa
Indica Group
Length = 238
Score = 58.0 bits (29), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| ||| ||||||||| ||||| ||||||||||
Sbjct: 2 tactccctccgtatctaaatatttaacgccgttgatttttttaa 45
>RF01058;MIR806;AP004395.3/128727-128487 39947:Oryza sativa
Japonica Group
Length = 241
Score = 58.0 bits (29), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||| ||||||||||| |||||| || ||||||||||||||||
Sbjct: 2 tactcactccgtacctaaatatttgacgccgttaatttttttaa 45
>RF01058;MIR806;AP008213.1/15904442-15904682 39947:Oryza sativa
Japonica Group
Length = 241
Score = 58.0 bits (29), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||||| |||| |||||| || ||||||||||||||||
Sbjct: 2 tactccctccgtccctaaatatttgacgccgttaatttttttaa 45
>RF01058;MIR806;AAAA02003933.1/34064-34298 39946:Oryza sativa
Indica Group
Length = 235
Score = 56.0 bits (28), Expect = 3e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaatatatttgacagttta 83
||||||||| || | || ||||||||| ||||| ||||||||||||| ||||| ||||
Sbjct: 2 tactccctctgtccttaaatatttaacgccgttgatttttttaatatgtttgatcgtttg 61
Query: 84 tcttatt 90
|||||||
Sbjct: 62 tcttatt 68
>RF01058;MIR806;AC099734.5/27757-27519 39947:Oryza sativa Japonica
Group
Length = 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaatatatttgacagttta 83
|||||||| ||||||||||| ||| || ||||| || |||| ||||| |||||| ||| |
Sbjct: 238 tactcccttcgtacctatatttttgacgccgttgatcttttaaatatgtttgaccgttca 179
Query: 84 tcttatt 90
|||||||
Sbjct: 178 tcttatt 172
>RF01058;MIR806;AAAA02022686.1/1029-1267 39946:Oryza sativa Indica
Group
Length = 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaatatatttgacagttta 83
||||| |||||| |||| ||||||||| ||||| | ||||| |||||||||||| |||||
Sbjct: 238 tactcactccgt-cctaaatatttaacgccgttgagtttttaaatatatttgaccgttta 180
Query: 84 tcttatt 90
| |||||
Sbjct: 179 ttttatt 173
>RF01058;MIR806;AAAA02006986.1/13018-13261 39946:Oryza sativa
Indica Group
Length = 244
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaattttttt-aatatatttgacagttt 82
|||||||||||| |||| |||||| || ||||| |||||||| ||||| |||||| |||
Sbjct: 2 tactccctccgtccctaaatatttgacaccgttgatttttttaaatatgtttgaccgttc 61
Query: 83 atctta 88
||||||
Sbjct: 62 atctta 67
>RF01058;MIR806;AAAA02006155.1/18212-17973 39946:Oryza sativa Indica
Group
Length = 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 27 tccctccgtacctatatatttaacnccgttaattttttt-aatatatttgacagtttatc 85
||||||| | |||| |||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 236 tccctccatccctaaatatttgacaccgttaatttttttaaatatatttgaccgttcgtc 177
Query: 86 ttatt 90
|||||
Sbjct: 176 ttatt 172
>RF01058;MIR806;AP008211.1/6299107-6299336 39947:Oryza sativa
Japonica Group
Length = 230
Score = 52.0 bits (26), Expect = 4e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| |||||| || ||||| ||||||||||
Sbjct: 1 gtactccctccgtccctaaatatttgacgccgttgatttttttaa 45
>RF01058;MIR806;AP008217.1/22458494-22458255 39947:Oryza sativa
Japonica Group
Length = 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaatatat 72
|||||||||||| ||| ||||||||| ||||| |||||||||| ||||
Sbjct: 2 tactccctccgtctctaaatatttaacaccgttgatttttttaaaatat 50
>RF01058;MIR806;AL731762.2/108091-108329 4530:Oryza sativa (rice)
Length = 239
Score = 52.0 bits (26), Expect = 4e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 42 atatttaacnccgttaatttttttaatatatttgacagtttatcttatt 90
||||||||| ||||| ||||||| |||||||||||| ||| || |||||
Sbjct: 220 atatttaacgccgttgattttttaaatatatttgaccgttcattttatt 172
>RF01058;MIR806;AACV01003404.1/46592-46354 39947:Oryza sativa
Japonica Group
Length = 239
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgtt-aatttttttaatatatttgacagttt 82
|||||||||||| |||| |||||| || ||||| | |||||||||||| |||||| ||||
Sbjct: 2 tactccctccgtccctaaatatttgacgccgttgattttttttaatatgtttgacggttt 61
Query: 83 atctt 87
||||
Sbjct: 62 gtctt 66
>RF01058;MIR806;AP008211.1/16823185-16823424 39947:Oryza sativa
Japonica Group
Length = 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| ||||||||| ||||| | ||||||||
Sbjct: 1 gtactccctccgtccctaaatatttaacgccgttgacttttttaa 45
>RF01058;MIR806;AACV01015099.1/921-1159 39947:Oryza sativa
Japonica Group
Length = 239
Score = 50.1 bits (25), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||||| ||| ||||||||| ||||| ||||||||||
Sbjct: 2 tactccctccgtcactaaatatttaacgccgttgatttttttaa 45
>RF01058;MIR806;AC108223.5/85601-85840 39947:Oryza sativa Japonica
Group
Length = 240
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgtt-aatttttttaatatatttgacagttt 82
|||||||||||| |||| |||||| || ||||| | |||||| |||||||||||| |||
Sbjct: 239 tactccctccgtccctaaatatttgacgccgttgacttttttaaatatatttgactgttc 180
Query: 83 atcttatt 90
|||||||
Sbjct: 179 gtcttatt 172
>RF01058;MIR806;AP008217.1/17014058-17013816 39947:Oryza sativa
Japonica Group
Length = 243
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaa-tttttttaatatatttgacagttt 82
|||||||||||| ||| |||||| || ||||||| ||||||| |||| ||||||||||
Sbjct: 2 tactccctccgtttctaaatatttgacgccgttaacttttttttatatgtttgacagttc 61
Query: 83 atcttatt 90
|| |||||
Sbjct: 62 attttatt 69
>RF01058;MIR806;AC137592.2/48121-47884 39947:Oryza sativa Japonica
Group
Length = 238
Score = 50.1 bits (25), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||||| ||| ||||||| | ||||||||||||||||
Sbjct: 2 tactccctccgtttctaaatatttatcgccgttaatttttttaa 45
>RF01058;MIR806;AC123517.2/46025-46260 39947:Oryza sativa Japonica
Group
Length = 236
Score = 50.1 bits (25), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 43 tatttaacnccgttaatttttttaatatatttgacagtttatcttatt 90
|||||||| |||||| ||||| |||||||||||| |||||||||||
Sbjct: 21 tatttaacgtcgttaactttttaaatatatttgaccatttatcttatt 68
>RF01058;MIR806;AACV01006779.1/10575-10331 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||||| ||| |||||| || ||||||||||||||||
Sbjct: 244 tactccctccgtctctaaatatttgacgccgttaatttttttaa 201
>RF01058;MIR806;AAAA02031472.1/28724-28967 39946:Oryza sativa
Indica Group
Length = 244
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgtt-aatttttttaatatatttgac 77
||||||||||||| |||| |||||| || ||||| |||||||| || |||||||||
Sbjct: 1 gtactccctccgtccctaaatatttgacgccgttgaattttttaaacatatttgac 56
>RF01058;MIR806;AAAA02002775.1/12161-12400 39946:Oryza sativa
Indica Group
Length = 240
Score = 50.1 bits (25), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||||| |||| || |||||| ||||| ||||||||||
Sbjct: 2 tactccctccgtccctaaatgtttaacgccgttgatttttttaa 45
>RF01058;MIR806;AAAA02005859.1/41085-40852 39946:Oryza sativa Indica
Group
Length = 234
Score = 50.1 bits (25), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||| | || | ||||||||| ||||||||||||||||
Sbjct: 233 tactccctccttcccaaaatatttaacgccgttaatttttttaa 190
>RF01058;MIR806;AAAA02029566.1/13003-12764 39946:Oryza sativa
Indica Group
Length = 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 25 actccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||| |||| ||||||||| ||||| | ||||||||
Sbjct: 3 actccctccgttcctaaatatttaacgccgttgaattttttaa 45
>RF01058;MIR806;AAAA02000630.1/3059-3265 39946:Oryza sativa Indica
Group
Length = 207
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 59 tttttttaatatatttgacagtttatcttatt 90
|||||| |||||||||||| ||||||||||||
Sbjct: 187 ttttttaaatatatttgaccgtttatcttatt 156
>RF01058;MIR806;AAAA02037639.1/5504-5745 39946:Oryza sativa Indica
Group
Length = 242
Score = 48.1 bits (24), Expect = 6e-05
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaattttttt-aatatatttgac 77
|||||||||||| | || |||||| || ||||| |||||||| ||||||||||||
Sbjct: 2 tactccctccgtccttaaatatttgacgccgttgatttttttaaatatatttgac 56
>RF01058;MIR806;AP003735.4/132242-132007 39947:Oryza sativa
Japonica Group
Length = 236
Score = 48.1 bits (24), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cctatatatttaacnccgttaatttttttaa 67
|||| ||||||||| ||||||||||||||||
Sbjct: 15 cctaaatatttaacaccgttaatttttttaa 45
>RF01058;MIR806;AP003347.3/130964-130726 39947:Oryza sativa Japonica
Group
Length = 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaatatatttgacagttta 83
|||||||||||| ||| ||||||||| |||||||||| | ||||||||| |||||
Sbjct: 238 tactccctccgtttctaaatatttaacattgttaatttttaacacatatttgaccgttta 179
Query: 84 tcttatt 90
|||||||
Sbjct: 178 tcttatt 172
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 59 tttttttaatatatttgacagtttatcttatt 90
|||||| |||||||||||||||| ||||||||
Sbjct: 38 ttttttaaatatatttgacagttcatcttatt 69
>RF01058;MIR806;AACV01013530.1/7026-6788 39947:Oryza sativa
Japonica Group
Length = 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 25 actccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||| ||| ||||||||| | ||||||||||||||
Sbjct: 3 actccctccgtctctaaatatttaacgctgttaatttttttaa 45
>RF01058;MIR806;AP008208.1/24680719-24680483 39947:Oryza sativa
Japonica Group
Length = 237
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 59 tttttttaatatatttgacagtttatcttatt 90
|||||| |||||||||||| ||||||||||||
Sbjct: 38 ttttttaaatatatttgaccgtttatcttatt 69
>RF01058;MIR806;AAAA02007333.1/47340-47102 39946:Oryza sativa
Indica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 42 atatttaacnccgttaatttttttaat-atatttgacagtttatcttatt 90
||||||||| |||| |||||||||| ||||||||| ||||||||||||
Sbjct: 20 atatttaacgtcgttgatttttttaaacatatttgaccgtttatcttatt 69
>RF01058;MIR806;AP008217.1/25855512-25855275 39947:Oryza sativa
Japonica Group
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 atatttaacnccgttaatttttttaa 67
||||||||| ||||||||||||||||
Sbjct: 20 atatttaacgccgttaatttttttaa 45
>RF01058;MIR806;AACV01019786.1/4967-5204 39947:Oryza sativa Japonica
Group
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 23 gtactccctccgtacctatatatttaacnccgtt 56
||||||||||||| |||| ||||||||| |||||
Sbjct: 238 gtactccctccgtccctaaatatttaacgccgtt 205
>RF01058;MIR806;AAAA02035310.1/16097-16335 39946:Oryza sativa
Indica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 27 tccctccgtacctatatatttaacnccgttaatttttt 64
|||||||||||||| |||||| || ||||| |||||||
Sbjct: 5 tccctccgtacctaaatatttgacgccgttgatttttt 42
>RF01058;MIR806;AP005516.5/1179-1421 39947:Oryza sativa Japonica
Group
Length = 243
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaattttttt 65
|||||||||||| |||| |||||| || ||||| ||||||||
Sbjct: 2 tactccctccgtccctaaatatttgacgccgttgattttttt 43
>RF01058;MIR806;AAAA02022467.1/59045-59294 39946:Oryza sativa
Indica Group
Length = 250
Score = 46.1 bits (23), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 atatttaacnccgttaatttttttaa 67
||||||||| ||||||||||||||||
Sbjct: 20 atatttaacgccgttaatttttttaa 45
>RF01058;MIR806;AACV01007388.1/20511-20751 39947:Oryza sativa
Japonica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttt 64
||||||||||||| |||| |||||| || ||||| |||||||
Sbjct: 1 gtactccctccgtccctaaatatttgacgccgttgatttttt 42
>RF01058;MIR806;AP008218.1/15578310-15578550 39947:Oryza sativa
Japonica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaattttttt 65
|||||||||||| |||| |||||||| ||||| ||||||||
Sbjct: 2 tactccctccgtccctaaatatttaatgccgttgattttttt 43
>RF01058;MIR806;AACV01022757.1/3300-3063 39947:Oryza sativa
Japonica Group
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 42 atatttaacnccgtt-aatttttttaatatatttgacagtttatcttatt 90
||||||||| || || |||||||| ||||| ||||||||||| |||||||
Sbjct: 20 atatttaacgcctttgaattttttaaatatgtttgacagtttgtcttatt 69
>RF01058;MIR806;AAAA02007515.1/2211-1999 39946:Oryza sativa Indica
Group
Length = 213
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||| | |||| ||||||||| ||||| | ||||||||
Sbjct: 1 gtactccctccatccctaaatatttaacaccgttcacttttttaa 45
>RF01058;MIR806;AAAA02022079.1/11167-11411 39946:Oryza sativa
Indica Group
Length = 245
Score = 44.1 bits (22), Expect = 0.001
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 27 tccctccgtacctatatatttaacnccgttaatttttttaa-tatatttgacagtttatc 85
||||||||| | || |||||| || ||||| |||||||||| ||| |||||| ||||||
Sbjct: 5 tccctccgtccttaaatatttgacgccgttgatttttttaaatatgtttgaccatttatc 64
Query: 86 ttatt 90
|||||
Sbjct: 65 ttatt 69
>RF01058;MIR806;AP008209.1/13020311-13020550 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgtt 56
||||||||||||| ||| ||||||||| |||||
Sbjct: 2 tactccctccgtaactaaatatttaacgccgtt 34
>RF01058;MIR806;AAAA02033172.1/11051-11289 39946:Oryza sativa
Indica Group
Length = 239
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| ||| |||||| || ||||||| ||||||||
Sbjct: 1 gtactccctccgtttctaaatatttgacgccgttaacttttttaa 45
>RF01058;MIR806;AC097279.5/49473-49713 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
|||||||||| || ||| |||||| || ||||||||||||||||
Sbjct: 241 gtactccctctgtctctaaatatttgacgccgttaatttttttaa 197
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| |||||| || | |||||||||||||
Sbjct: 241 gtactccctccgttcctaaatatttgacgctattaatttttttaa 197
>RF01058;MIR806;AL935070.3/59118-58879 4530:Oryza sativa (rice)
Length = 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 116 ttattattaaatatgtttttat-tatatananagttttac 154
|||||||||||||| ||||||| |||||| | ||||||||
Sbjct: 114 ttattattaaatatatttttatgtatatatatagttttac 153
>RF01058;MIR806;AC136971.3/14967-14725 39947:Oryza sativa Japonica
Group
Length = 243
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| ||| |||||| || ||||||| ||||||||
Sbjct: 1 gtactccctccgtctctaaatatttgacgccgttaacttttttaa 45
>RF01058;MIR806;AACV01000141.1/34089-33853 39947:Oryza sativa
Japonica Group
Length = 237
Score = 44.1 bits (22), Expect = 0.001
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgtt-aatttttttaatatatttgacagtt 81
||||||||||||| |||| |||||| || | ||| | |||||| |||||||||||| |||
Sbjct: 1 gtactccctccgtccctaaatatttgacactgttgacttttttaaatatatttgaccgtt 60
Query: 82 tatcttatt 90
|||||||
Sbjct: 61 cgtcttatt 69
>RF01058;MIR806;AACV01022354.1/38337-38576 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| |||||| || |||||| ||||||||
Sbjct: 1 gtactccctccgtccctaaatatttgacgtcgttaacttttttaa 45
>RF01058;MIR806;AAAA02007577.1/64458-64218 39946:Oryza sativa
Indica Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| |||||| || ||||| | ||||||||
Sbjct: 1 gtactccctccgtccctaaatatttgacaccgttgacttttttaa 45
>RF01058;MIR806;AC133216.2/47954-48182 39947:Oryza sativa Japonica
Group
Length = 229
Score = 44.1 bits (22), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttt 64
|||||||||||| ||| ||||||||| ||||||| |||||
Sbjct: 228 tactccctccgtttctaaatatttaacaccgttaacttttt 188
>RF01058;MIR806;AP002816.1/108160-108400 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttt 64
|||||||||||| |||| |||||| || ||||| |||||||
Sbjct: 2 tactccctccgtccctaaatatttgacgccgttgatttttt 42
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| |||||| || |||| ||||||||||
Sbjct: 1 gtactccctccgttcctaaatatttgacgtcgttgatttttttaa 45
>RF01058;MIR806;AP003917.3/19568-19329 39947:Oryza sativa Japonica
Group
Length = 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttt 64
|||||||||||| ||| |||||| || |||||||||||||
Sbjct: 239 tactccctccgtctctaaatatttgacaccgttaatttttt 199
>RF01058;MIR806;AP008207.1/42694807-42694580 39947:Oryza sativa
Japonica Group
Length = 228
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||| | | || ||||||||| ||||| ||||||||||
Sbjct: 228 gtactccctcctttcttaaatatttaacgccgttgatttttttaa 184
>RF01058;MIR806;AC078977.6/20616-20377 39947:Oryza sativa Japonica
Group
Length = 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttt 64
|||||||||||| |||| |||||| || ||||| |||||||
Sbjct: 239 tactccctccgtccctaaatatttgacgccgttgatttttt 199
>RF01058;MIR806;AP008213.1/364219-364460 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 24 tactccctccgtacctatatatttaacnccgttaatttttttaat 68
|||||||||| | |||| || ||| || |||||||||||||||||
Sbjct: 2 tactccctccatccctaaattttttacgccgttaatttttttaat 46
>RF01058;MIR806;AAAA02016329.1/13946-14186 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 23 gtactccctccgtacctatatatttaacnccgttaatttttttaa 67
||||||||||||| |||| ||||||||| || || | ||||||||
Sbjct: 241 gtactccctccgtccctaaatatttaacaccattgacttttttaa 197
