miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL606455.3/44444-44562 39947:Oryza sativa Japonica
Group
Length = 119
Score = 236 bits (119), Expect = 6e-62
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 10 tgtttacttcctctgtcccaaaatatagcaacctaggactctgtctagatatgttgttct 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtttacttcctctgtcccaaaatatagcaacctaggactctgtctagatatgttgttct 60
Query: 70 aggtggtgtcccatctagtcgttctatgttgctatattctgggacagagggagtaatat 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtggtgtcccatctagtcgttctatgttgctatattctgggacagagggagtaatat 119
>RF00906;MIR1122;AAAA02015954.1/10941-11097 39946:Oryza sativa
Indica Group
Length = 157
Score = 63.9 bits (32), Expect = 5e-10
Identities = 52/58 (89%), Gaps = 3/58 (5%)
Strand = Plus / Minus
Query: 68 ctaggtggtgtcccatctagtcgttctatgttgctatattctgggacagagggagtaa 125
||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||
Sbjct: 58 ctaggtgatgtcccatctaat---tctaggttgctatattctgggacagagggagtaa 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 13 ttacttcctctgtcccaaaatatagcaacctag 45
||||| ||||||||||| |||||||||||||||
Sbjct: 4 ttactccctctgtcccagaatatagcaacctag 36
>RF00906;MIR1122;AACV01007748.1/56916-56769 39947:Oryza sativa
Japonica Group
Length = 148
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 91 ttctatgttgctatattctgggacagagggagta 124
|||||||||||||||||||||||| |||||||||
Sbjct: 38 ttctatgttgctatattctgggacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 91 ttctatgttgctatattctgggacagagggagta 124
||||| |||||||||||||||||| |||||||||
Sbjct: 111 ttctaggttgctatattctgggacggagggagta 144
>RF00906;MIR1122;AACV01011494.1/5583-5447 39947:Oryza sativa
Japonica Group
Length = 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagta 124
||||||||||||||||||||||||||||
Sbjct: 32 gttgctatattctgggacagagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| ||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtcccagaatatagcaacctaggac 39
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 cctctgtcccaaaatatagcaacctaggac 48
|||| |||||| ||||||||||||||||||
Sbjct: 128 cctccgtcccagaatatagcaacctaggac 99
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggag 122
|||||||||||||||||| |||||||
Sbjct: 106 gttgctatattctgggacggagggag 131
>RF00906;MIR1122;AP008208.1/15568785-15568653 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggact 49
||||||||||||||||||||||| |||||||||||
Sbjct: 129 tacttcctctgtcccaaaatataagaacctaggact 94
>RF00906;MIR1122;AACV01011125.1/13959-13873 39947:Oryza sativa
Japonica Group
Length = 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 13 ttacttcctctgtcccaaaatatagcaacctaggac 48
||||| |||| |||||||||||||||||||||||||
Sbjct: 4 ttactccctccgtcccaaaatatagcaacctaggac 39
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 26 cccaaaatatagcaacctaggac 48
|||||||||||||||||||||||
Sbjct: 71 cccaaaatatagcaacctaggac 49
>RF00906;MIR1122;AC136522.3/138087-137951 39947:Oryza sativa
Japonica Group
Length = 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
||||||||||||||||||||||||||||
Sbjct: 106 gttgctatattctgggacagagggagta 133
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| ||||||||||| ||||||||||||||||||
Sbjct: 133 tactccctctgtcccagaatatagcaacctaggac 99
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggag 122
|||||||||||||||||| |||||||
Sbjct: 32 gttgctatattctgggacggagggag 7
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 cctctgtcccaaaatatagcaacctaggac 48
|||| |||||| ||||||||||||||||||
Sbjct: 10 cctccgtcccagaatatagcaacctaggac 39
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggact 49
|||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tactacctctgtcccaaaatatagcaacctaagact 40
>RF00906;MIR1122;AY518220.1/185-29 39946:Oryza sativa Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 91 ttctatgttgctatattctgggacagagggagtaa 125
||||| |||||||||||||||||| ||||||||||
Sbjct: 120 ttctaggttgctatattctgggacggagggagtaa 154
Score = 50.1 bits (25), Expect = 8e-06
Identities = 60/71 (84%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 51 tgtctagatatgttgttctaggtggtgtcccatctagtcgttctatgttgctatattctg 110
|||||||||| | || ||||||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 75 tgtctagatacatcgtactaggtgatgtcccatctagtc---ctaggtttctatattctg 19
Query: 111 ggacagaggga 121
|||| ||||||
Sbjct: 18 ggacggaggga 8
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatatagcaacctaggac 39
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| |||||||||||||||||||||||||
Sbjct: 105 tactccctccgtcccaaaatatagcaacctaggac 71
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| |||||||||||||||||||||||||
Sbjct: 82 tactccctccgtcccaaaatatagcaacctaggac 48
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatatagcaacctagga 38
>RF00906;MIR1122;AC079357.3/123085-123240 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagtaata 127
||||||||||| |||||||||||||||||||
Sbjct: 125 gttgctatattatgggacagagggagtaata 155
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 13 ttacttcctctgtcccaaaatatagcaacctag 45
||||| ||||||||||| |||||||||||||||
Sbjct: 153 ttactccctctgtcccataatatagcaacctag 121
>RF00906;MIR1122;AAAA02010839.1/12518-12371 39946:Oryza sativa
Indica Group
Length = 148
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 91 ttctatgttgctatattctgggacagagggagta 124
||||| |||||||||||||||||| |||||||||
Sbjct: 38 ttctaggttgctatattctgggacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 91 ttctatgttgctatattctgggacagagggagta 124
||||| |||| ||||||||||||| |||||||||
Sbjct: 111 ttctaggttgttatattctgggacggagggagta 144
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 ctctgtcccaaaatatagcaacctag 45
||||||||||||||||||||||||||
Sbjct: 11 ctctgtcccaaaatatagcaacctag 36
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
|||| |||| ||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaatatagcaacctag 78
>RF00906;MIR1122;AC226782.1/54692-54560 63629:Oryza minuta
Length = 133
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 cctctgtcccaaaatatagcaacctaggac 48
|||| |||||||||||||||||||||||||
Sbjct: 124 cctccgtcccaaaatatagcaacctaggac 95
>RF00906;MIR1122;AAAA02027287.1/26708-26551 39946:Oryza sativa
Indica Group
Length = 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ttacttcctctgtcccaaaatatagc 38
||||||||||||||||||||||||||
Sbjct: 4 ttacttcctctgtcccaaaatatagc 29
>RF00906;MIR1122;AACV01024802.1/12019-12139 39947:Oryza sativa
Japonica Group
Length = 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| ||||||||||||||||||||||||
Sbjct: 117 tactccctccgtcccaaaatatagcaacctagga 84
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 cctctgtcccaaaatatagcaacctagga 47
|||| ||||||||||||||||||||||||
Sbjct: 10 cctccgtcccaaaatatagcaacctagga 38
>RF00906;MIR1122;AP008217.1/10919176-10919047 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 gtcccaaaatatagcaacctaggact 49
||||||||||||||||||||||||||
Sbjct: 15 gtcccaaaatatagcaacctaggact 40
>RF00906;MIR1122;AACV01030538.1/1548-1655 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 93 ctatgttgctatattctgggacagagggagta 124
|||| ||||||||||||||||| |||||||||
Sbjct: 36 ctatattgctatattctgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagtaata 127
||||||||||||| |||| ||||||||||||
Sbjct: 77 gttgctatattctaggacggagggagtaata 107
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
|||| |||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtcccaaaatatagcaatctag 36
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
|||| |||| ||||||||||||||||||||||
Sbjct: 158 tactccctccgtcccaaaatatagcaacctag 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 ttgctatattctgggacagagggagta 124
|||||||||| ||||||||||||||||
Sbjct: 31 ttgctatattttgggacagagggagta 5
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 93 ctatgttgctatattctgggacagagggagta 124
||||||||||||||| |||||| |||||||||
Sbjct: 36 ctatgttgctatattatgggacggagggagta 5
>RF00906;MIR1122;AACV01013196.1/2181-2029 39947:Oryza sativa
Japonica Group
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 ctatgttgctatattctgggacagagggagta 124
||||||||||||||| |||||| |||||||||
Sbjct: 118 ctatgttgctatattatgggacggagggagta 149
>RF00906;MIR1122;AACV01024602.1/9476-9344 39947:Oryza sativa
Japonica Group
Length = 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
|||||||||||||||||| |||||||||
Sbjct: 102 gttgctatattctgggacggagggagta 129
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| |||||| |||||||||||||||||
Sbjct: 129 tactccctccgtcccagaatatagcaacctagga 96
>RF00906;MIR1122;AAAA02010965.1/12989-13143 39946:Oryza sativa
Indica Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
|||||||||||||||||| |||||||||
Sbjct: 124 gttgctatattctgggacggagggagta 151
>RF00906;MIR1122;AP008218.1/13540804-13540671 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
|||||||||||||||||| |||||||||
Sbjct: 103 gttgctatattctgggacggagggagta 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| |||||| |||||||||||||||||
Sbjct: 130 tactccctccgtcccagaatatagcaacctagga 97
>RF00906;MIR1122;AAAA02004520.1/22209-22055 39946:Oryza sativa
Indica Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
|||| ||||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtcccataatatagcaacctag 36
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagta 124
||||||||||| ||||||||||||||||
Sbjct: 32 gttgctatattatgggacagagggagta 5
>RF00906;MIR1122;AACV01014487.1/12034-11914 39947:Oryza sativa
Japonica Group
Length = 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
|||||||||||||||||||| |||| ||||||
Sbjct: 5 tacttcctctgtcccaaaatgtagctacctag 36
>RF00906;MIR1122;AL831805.4/14646-14723 4530:Oryza sativa (rice)
Length = 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
||||||||||||||||| ||||||||||
Sbjct: 47 gttgctatattctgggatagagggagta 74
>RF00906;MIR1122;AAAA02010757.1/37415-37572 39946:Oryza sativa
Indica Group
Length = 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagta 124
|||| |||||||||||||||||||||||
Sbjct: 32 gttgttatattctgggacagagggagta 5
>RF00906;MIR1122;AAAA02026539.1/31268-31114 39946:Oryza sativa
Indica Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 ttacttcctctgtcccaaaatatagcaa 40
||||| ||||||||||||||||||||||
Sbjct: 152 ttactccctctgtcccaaaatatagcaa 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 98 ttgctatattctgggacagagggagtaa 125
|||||||||| |||||||||||||||||
Sbjct: 125 ttgctatattttgggacagagggagtaa 152
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa Indica
Group
Length = 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
|||||||||||||||||| |||||||||
Sbjct: 102 gttgctatattctgggacggagggagta 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaaccta 44
||||||||| |||||| ||||||||||||||
Sbjct: 5 tacttcctccgtcccagaatatagcaaccta 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| |||||| ||||||||||||||||||
Sbjct: 129 tactccctccgtcccagaatatagcaacctaggac 95
>RF00906;MIR1122;AC079021.5/107369-107476 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 ctatgttgctatattctgggacagagggagta 124
|||| ||||||||||||||||| |||||||||
Sbjct: 73 ctatattgctatattctgggacggagggagta 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagtaata 127
||||||||||||| |||| ||||||||||||
Sbjct: 32 gttgctatattctaggacggagggagtaata 2
>RF00906;MIR1122;AP008216.1/2906565-2906717 39947:Oryza sativa
Japonica Group
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
||||||||| ||||||||||||||| ||||||
Sbjct: 149 tacttcctccgtcccaaaatatagctacctag 118
>RF00906;MIR1122;AAAA02028867.1/14372-14216 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagta 124
|||||||||||||||||| |||||||||
Sbjct: 32 gttgctatattctgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
|||||||||||||||||| |||||||||
Sbjct: 126 gttgctatattctgggacggagggagta 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| |||||| ||||||||||||||||||
Sbjct: 153 tactccctccgtcccagaatatagcaacctaggac 119
>RF00906;MIR1122;AACV01007837.1/4719-4874 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagta 124
||||||||||| ||||||||||||||||
Sbjct: 125 gttgctatattatgggacagagggagta 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaaccta 44
|||| ||||||||||| ||||||||||||||
Sbjct: 152 tactccctctgtcccataatatagcaaccta 122
>RF00906;MIR1122;BX000499.1/44774-44875 4530:Oryza sativa (rice)
Length = 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 gtcccaaaatatagcaacctagga 47
||||||||||||||||||||||||
Sbjct: 15 gtcccaaaatatagcaacctagga 38
>RF00906;MIR1122;AP008213.1/29571801-29571647 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggact 49
|||| |||| ||||||||||||||||||||| ||||
Sbjct: 151 tactacctccgtcccaaaatatagcaacctaagact 116
>RF00906;MIR1122;AACV01002049.1/12796-12954 39947:Oryza sativa
Japonica Group
Length = 159
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctag 45
||||||||| ||||||||||||||| ||||||
Sbjct: 155 tacttcctccgtcccaaaatatagctacctag 124
>RF00906;MIR1122;AAAA02024403.1/20133-20023 39946:Oryza sativa
Indica Group
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| ||||||| |||||||||||||||||
Sbjct: 107 tactccctccgtcccaatatatagcaacctaggac 73
>RF00906;MIR1122;AAAA02005537.1/4098-4188 39946:Oryza sativa
Indica Group
Length = 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 ttacttcctctgtcccaaaatatagcaacct 43
||||| |||| ||||||||||||||||||||
Sbjct: 88 ttactccctccgtcccaaaatatagcaacct 58
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagtaat 126
||||||||||| |||||| |||||||||||
Sbjct: 60 gttgctatattttgggacggagggagtaat 89
>RF00906;MIR1122;AB107361.1/132-43 39947:Oryza sativa Japonica
Group
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaa 40
|||| ||||||||||||||||||||||
Sbjct: 5 tactacctctgtcccaaaatatagcaa 31
>RF00906;MIR1122;AAAA02030078.1/8056-7936 39946:Oryza sativa Indica
Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 102 tatattctgggacagagggagta 124
|||||||||||||||||||||||
Sbjct: 27 tatattctgggacagagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| ||| ||||||| |||||||||||||||||
Sbjct: 117 tactccctttgtcccataatatagcaacctagga 84
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 95 atgttgctatattctgggacagagggagtaa 125
||||||||||||| |||||| ||||||||||
Sbjct: 103 atgttgctatattttgggacggagggagtaa 133
>RF00906;MIR1122;AACV01010795.1/6042-6149 39947:Oryza sativa
Japonica Group
Length = 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 ttgctatattctgggacagagggagta 124
||||||||||||||||| |||||||||
Sbjct: 31 ttgctatattctgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagtaata 127
||||||||||||| |||| ||||||||||||
Sbjct: 77 gttgctatattctaggacggagggagtaata 107
>RF00906;MIR1122;AP008214.1/11549737-11549627 39947:Oryza sativa
Japonica Group
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| ||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaatatatagcaacctaggac 39
>RF00906;MIR1122;AAAA02026264.1/30762-30856 39946:Oryza sativa
Indica Group
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 ttacttcctctgtcccaaaatatagcaacct 43
||||| |||||||||||||| ||||||||||
Sbjct: 92 ttactccctctgtcccaaaaaatagcaacct 62
>RF00906;MIR1122;AC217198.1/19286-19151 4537:Oryza punctata
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 95 atgttgctatattctgggacagagggagtaa 125
||||||||||||| |||||| ||||||||||
Sbjct: 103 atgttgctatattttgggacggagggagtaa 133
>RF00906;MIR1122;AAAA02035181.1/25-100 39946:Oryza sativa Indica
Group
Length = 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 ttgctatattctgggacagaggg 120
|||||||||||||||||||||||
Sbjct: 46 ttgctatattctgggacagaggg 68
>RF00906;MIR1122;AP008209.1/30325748-30325904 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| ||||||||||| ||||||| ||||||||||
Sbjct: 5 tactccctctgtcccataatatagaaacctaggac 39
>RF00906;MIR1122;AC134256.4/172189-172345 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggac 48
|||| |||| |||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatatagcaacctaggac 39
>RF00906;MIR1122;AL731784.3/41209-41071 4530:Oryza sativa (rice)
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaaccta 44
|||||||||||||| |||||||||| |||||
Sbjct: 5 tacttcctctgtcctaaaatatagctaccta 35
>RF00906;MIR1122;AP008209.1/554501-554366 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 95 atgttgctatattctgggacagagggagtaa 125
||||||||||||| |||||| ||||||||||
Sbjct: 103 atgttgctatattttgggacggagggagtaa 133
>RF00906;MIR1122;AACV01013835.1/10952-10825 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 19 cctctgtcccaaaatatagcaacctag 45
|||| ||||||||||||||||||||||
Sbjct: 10 cctccgtcccaaaatatagcaacctag 36
>RF00906;MIR1122;AP008207.1/298223-298350 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagtaata 127
|||||||||||||||||| || |||||||||
Sbjct: 97 gttgctatattctgggacggatggagtaata 127
>RF00906;MIR1122;AAAA02000357.1/59924-60057 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 90 gttctatgttgctatattctgggacagagggagta 124
|||||||||||||||||| || ||| |||||||||
Sbjct: 96 gttctatgttgctatattatgcgacggagggagta 130
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaaccta 44
|||| |||| |||||||||||||||||||||
Sbjct: 103 tactccctccgtcccaaaatatagcaaccta 73
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacct 43
|||| |||| ||||||||||||||||||||
Sbjct: 127 tactccctccgtcccaaaatatagcaacct 98
>RF00906;MIR1122;AAAA02001787.1/17032-16917 39946:Oryza sativa
Indica Group
Length = 116
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctaggactctgtctagat 59
|||| |||| |||||| |||||||||||||| | |||||||||||
Sbjct: 112 tactccctccgtcccataatatagcaacctacgcatctgtctagat 67
>RF00906;MIR1122;AP008212.1/21312652-21312767 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 gtcccaaaatatagcaacctag 45
||||||||||||||||||||||
Sbjct: 108 gtcccaaaatatagcaacctag 87
>RF00906;MIR1122;AAAA02012587.1/870-973 39946:Oryza sativa Indica
Group
Length = 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaatctagcaacctagga 38
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 gtcccaaaatatagcaacctaggact 49
||||||||||||||||| ||||||||
Sbjct: 15 gtcccaaaatatagcaatctaggact 40
>RF00906;MIR1122;AP008216.1/17249383-17249263 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| ||| ||||||| |||||||||||||||||
Sbjct: 5 tactccctttgtcccataatatagcaacctagga 38
>RF00906;MIR1122;AP008210.1/20410479-20410327 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 102 tatattctgggacagagggagtaata 127
|||||| |||||||||||||||||||
Sbjct: 127 tatattatgggacagagggagtaata 152
>RF00906;MIR1122;CR855226.1/24689-24792 4530:Oryza sativa (rice)
Length = 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagtaat 126
||||||||||||||||| |||||||||||
Sbjct: 32 gttgctatattctgggaaggagggagtaat 3
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacct 43
|||| |||| ||||||||||||||||||||
Sbjct: 127 tactccctccgtcccaaaatatagcaacct 98
>RF00906;MIR1122;AP008210.1/352383-352497 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 97 gttgctatattctgggacagagggagtaat 126
||||||||||||||||| |||||||||||
Sbjct: 32 gttgctatattctgggaaggagggagtaat 3
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 91 ttctatgttgctatattctgggacagagggagta 124
||||| ||||||||||| |||||| |||||||||
Sbjct: 120 ttctaagttgctatattttgggacggagggagta 153
>RF00906;MIR1122;AAAA02017758.1/21324-21484 39946:Oryza sativa
Indica Group
Length = 161
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||||||||||| |||| |||||||||||
Sbjct: 157 tactccctctgtcccaatatattgcaacctagga 124
>RF00906;MIR1122;AL663014.3/90673-90776 39947:Oryza sativa
Japonica Group
Length = 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaatctagcaacctagga 38
>RF00906;MIR1122;AC137623.3/3519-3674 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 97 gttgctatattctgggacagagggagtaat 126
||||||||||| |||||| |||||||||||
Sbjct: 125 gttgctatattatgggacggagggagtaat 154
>RF00906;MIR1122;AC079889.20/103144-103018 39947:Oryza sativa
Japonica Group
Length = 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 91 ttctatgttgctatattctgggacagagggagta 124
||||| |||||||||||||| ||| |||||||||
Sbjct: 38 ttctaggttgctatattctgagacggagggagta 5
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacct 43
|||| |||| ||||||||||||||||||||
Sbjct: 151 tactccctccgtcccaaaatatagcaacct 122
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| || |||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatatagcaacctagga 38
>RF00906;MIR1122;AC137589.2/147211-147089 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| |||||| |||||||||||||||||
Sbjct: 119 tactccctccgtcccataatatagcaacctagga 86
>RF00906;MIR1122;AF229199.1/5910-5994 4530:Oryza sativa (rice)
Length = 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacctagga 47
|||| |||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaatatatagcaacctagga 38
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacct 43
|||| |||| ||||||||||||||||||||
Sbjct: 152 tactccctccgtcccaaaatatagcaacct 123
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tacttcctctgtcccaaaatatagcaacct 43
|||| |||| ||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaatatagcaacct 66
>RF00906;MIR1122;AACV01012521.1/1719-1614 39947:Oryza sativa
Japonica Group
Length = 106
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 tttacttcctctgtcccaaaatatagcaac 41
|||||| |||| ||||||||||||||||||
Sbjct: 104 tttactacctccgtcccaaaatatagcaac 75
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tacttcctctgtcccaaaatatagcaacct 43
||||||||| |||| |||||||||||||||
Sbjct: 5 tacttcctccgtccaaaaatatagcaacct 34
