miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||| ||||| | ||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 5 tactacctccgtgccaaaatatagcaacttttgaacggatgggacacatcctagtactac 64
Query: 67 gaatctaga 75
|||||||||
Sbjct: 65 gaatctaga 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 8 actccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatacg 67
||||||||| ||| ||||| || ||||| |||||||||| ||||||||||||||| ||||
Sbjct: 154 actccctccgtccgaaaatatagcaactcttgaacggataggacacatcctagtactacg 95
Query: 68 aatctagata 77
||||| ||||
Sbjct: 94 aatctggata 85
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 31 caacttttgaacggatgggacacatcctagtaatacgaatct 72
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 108 caacttttgaacggatgggacacatcctagtactacgaatct 67
Score = 61.9 bits (31), Expect = 2e-09
Identities = 89/106 (83%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 31 caacttttgaacggatgggacacatcctagtaatacgaatctagataa-gggcctgcaca 89
||||||||||| |||||||||||||| ||||| ||| ||||| || || ||| ||| ||
Sbjct: 8 caacttttgaatggatgggacacatcatagtactacaaatctggacaaggggtctgtcca 67
Query: 90 gattcttagtactagg--ttgtctcatccattcaaaaattgctata 133
||||| |||||||||| |||| ||||| ||||||| ||||||||
Sbjct: 68 gattcgtagtactaggatgtgtcccatccgttcaaaagttgctata 113
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa
Indica Group
Length = 149
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||| ||
Sbjct: 4 ctactccctccgtcccaaaatatagcaacttttgggtggatgggacatatcctagtacta 63
Query: 66 cgaatcta 73
||||||||
Sbjct: 64 cgaatcta 71
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||| ||
Sbjct: 154 ctactccctccgtcccaaaatataaggagttttggttggatgggacacatcctagtacta 95
Query: 66 cgaatctaga 75
||||||||||
Sbjct: 94 cgaatctaga 85
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||| ||
Sbjct: 154 ctactccctccgtcccaaaatataaggagttttggttggatgggacacatcctagtacta 95
Query: 66 cgaatctaga 75
||||||||||
Sbjct: 94 cgaatctaga 85
>RF00906;MIR1122;AAAA02026539.1/31268-31114 39946:Oryza sativa
Indica Group
Length = 155
Score = 60.0 bits (30), Expect = 9e-09
Identities = 112/137 (81%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 18 tcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatacgaatctagata 77
||||||||| | |||| |||||||||||||||||| ||| ||| | ||||||| | || |
Sbjct: 16 tcccaaaatattacaagttttgaacggatgggacatatcttaggactacgaat-ttgaaa 74
Query: 78 agggcctgcacagattcttagtactagg--ttgtctcatccattcaaaaattgctatact 135
||| ||| ||||||| |||| ||||| |||| |||| ||||||| |||||||| |
Sbjct: 75 ggggtctgtccagattcgtagtcctaggatatgtccaatccgttcaaaacttgctatatt 134
Query: 136 ttgggacagaggtagta 152
|||||||||||| ||||
Sbjct: 135 ttgggacagagggagta 151
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
||||||||| ||||||||| || ||| |||||||||||| ||||| ||||||| | |||
Sbjct: 151 tactccctctgtcccaaaatatagcaagttttgaacggattggacatatcctaggactac 92
Query: 67 gaatct 72
||||||
Sbjct: 91 gaatct 86
>RF00906;MIR1122;AAAA02005537.1/4098-4188 39946:Oryza sativa
Indica Group
Length = 91
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacat 55
|||||||||| ||||||||| || |||| |||||||||||| |||||||
Sbjct: 87 tactccctccgtcccaaaatatagcaacctttgaacggatgtgacacat 39
>RF00906;MIR1122;AL731589.3/62942-62786 39947:Oryza sativa Japonica
Group
Length = 157
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||||||||||||| ||| ||| | || ||||||||||| |||||||| |||
Sbjct: 153 tactccctccatcccaaaatataagaacctaagatcggatgggacatctcctagtactac 94
Query: 67 gaatc 71
|||||
Sbjct: 93 gaatc 89
>RF00906;MIR1122;AAAA02032490.1/12014-11907 39946:Oryza sativa
Indica Group
Length = 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaactttt 38
|||| |||||||||||||||||||||||||||
Sbjct: 104 tactacctccatcccaaaatgtaacaactttt 73
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaa 63
||||||||||||| ||||||||| || || ||||| ||||||||| |||||||||
Sbjct: 160 atctactccctccgtcccaaaatatagtaagttttggttggatgggacgtatcctagtac 101
Query: 64 tacgaatctaga 75
||||||||||||
Sbjct: 100 tacgaatctaga 89
>RF00906;MIR1122;AB107361.1/132-43 39947:Oryza sativa Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 121 aaaaattgctatactttgggacagaggtagta 152
||||||||||||| ||||||||||||||||||
Sbjct: 36 aaaaattgctatattttgggacagaggtagta 5
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa
Indica Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagta 62
|||||||||| ||||||||| |||||||||| | |||||||| |||||||||||
Sbjct: 5 tactccctccgtcccaaaatataacaactttgtactggatgggatacatcctagta 60
>RF00906;MIR1122;AP008210.1/24125321-24125446 39947:Oryza sativa
Japonica Group
Length = 126
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaatgtaacaacttttg 39
||||||||||||||||||||||| || |||||||||
Sbjct: 125 atctactccctccatcccaaaatatagcaacttttg 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgtaacaactttt 38
||||||||||||||||||||| || ||||||||
Sbjct: 4 ctactccctccatcccaaaatatagcaactttt 36
>RF00906;MIR1122;AL731884.4/124412-124271 4530:Oryza sativa (rice)
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 9 ctccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatacga 68
|||||||||||||||||| ||| || ||||| | ||||| ||||| | |||||| |||||
Sbjct: 136 ctccctccatcccaaaatataagaaattttggagggatgtgacactttctagtactacga 77
Query: 69 atct 72
||||
Sbjct: 76 atct 73
>RF00906;MIR1122;AAAA02021292.1/4370-4241 39946:Oryza sativa Indica
Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
|||||| |||||||||||||| ||| | ||||| | ||||| |||||||||||||| ||
Sbjct: 127 ctactctctccatcccaaaatataagagattttggatggatgtgacacatcctagtacta 68
Query: 66 cgaatct 72
||||||
Sbjct: 67 tgaatct 61
>RF00906;MIR1122;AC105262.3/31526-31369 39947:Oryza sativa
Japonica Group
Length = 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 35 ttttgaacggatgggacacatcctagtaatacgaatctagata 77
|||||| |||||||| || ||||||||| ||||||||||||||
Sbjct: 33 ttttgaccggatggggcatatcctagtactacgaatctagata 75
>RF00906;MIR1122;AL713933.6/72988-73123 4530:Oryza sativa (rice)
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagta 62
||||||||||||||||||||||| ||| ||| | || ||||||||||| ||||||||
Sbjct: 135 atctactccctccatcccaaaatataagaacctaggaccggatgggacatttcctagta 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||||||||||||| ||| ||| | || | ||||||||| |||||||| |||
Sbjct: 5 tactccctccatcccaaaatataagaacctaggaccagatgggacatttcctagtactac 64
Query: 67 gaatct 72
||||||
Sbjct: 65 gaatct 70
>RF00906;MIR1122;AC107206.4/43527-43372 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
||||||||||||||||||||| || ||||||||| |||||||| ||||||||| ||
Sbjct: 4 ctactccctccatcccaaaatatagcaacttttgtttggatgggatgtatcctagtacta 63
Query: 66 cgaatct 72
||||||
Sbjct: 64 tgaatct 70
>RF00906;MIR1122;AAAA02021210.1/61042-60904 39946:Oryza sativa
Indica Group
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 31 caacttttgaacggatgggacacatcctagtaatacgaatct 72
|||| ||||| ||||||||||||||||||||| || ||||||
Sbjct: 37 caacctttgagcggatgggacacatcctagtactatgaatct 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagt 61
|||||||| | ||||||||| || ||| || || ||||||||||||||||||||
Sbjct: 135 tactcccttcgtcccaaaatatagcaatcttcgagcggatgggacacatcctagt 81
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 42 cggatgggacacatcctagtaatacgaatctaga 75
|||||| |||||||||||||| ||||||||||||
Sbjct: 40 cggatgtgacacatcctagtactacgaatctaga 73
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 42 cggatgggacacatcctagtaatacgaatctaga 75
|||||| |||||||||||||| ||||||||||||
Sbjct: 83 cggatgtgacacatcctagtactacgaatctaga 50
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttg 39
||||||||||| ||||||||| ||||||||||||
Sbjct: 111 ctactccctccgtcccaaaatataacaacttttg 78
>RF00906;MIR1122;AAAA02004570.1/36950-37061 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttg 39
||||| ||||||||||||||| ||||||||||||
Sbjct: 109 ctactacctccatcccaaaatataacaacttttg 76
>RF00906;MIR1122;AP008209.1/554501-554366 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||| ||||||||| || |||| | || || |||||||||||||||||| ||
Sbjct: 132 tactccctccgtcccaaaatatagcaacatgggaccgcatgggacacatcctagtattaa 73
Query: 67 gaatct 72
||||||
Sbjct: 72 gaatct 67
>RF00906;MIR1122;AAAA02033568.1/5983-6119 39946:Oryza sativa
Indica Group
Length = 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctag 60
|||||||||||||||||||| ||| ||| | || ||||||||||| |||||||
Sbjct: 5 tactccctccatcccaaaatataagaacctaggaccggatgggacatatcctag 58
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaat 26
|||||||||||||||||||||||
Sbjct: 136 atctactccctccatcccaaaat 114
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
|||||||||||||||||||| |||||||||
Sbjct: 41 ggatgggacacatcctagtactacgaatct 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagta 62
|||||||||| ||||||||| ||| ||||| | ||||||||||||||||||||
Sbjct: 136 tactccctccgtcccaaaatataagggattttggatggatgggacacatcctagta 81
>RF00906;MIR1122;AP004672.3/95919-95808 39947:Oryza sativa Japonica
Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaactttt 38
||||| ||||||||||||||| |||||||||||
Sbjct: 109 ctactacctccatcccaaaatataacaactttt 77
>RF00906;MIR1122;AAAA02015795.1/16369-16480 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgtaa 30
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccatcccaaaatgtaa 28
>RF00906;MIR1122;AC108498.2/94665-94556 39947:Oryza sativa
Japonica Group
Length = 110
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgtaa 30
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccatcccaaaatgtaa 28
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||| ||||| ||||||||| ||| | ||||| | ||||| |||||||||||||| |||
Sbjct: 151 tacttcctccgtcccaaaatataagagattttggagggatgtgacacatcctagtactac 92
Query: 67 gaatc 71
|||||
Sbjct: 91 gaatc 87
>RF00906;MIR1122;AP008218.1/6871224-6871113 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 121 aaaaattgctatactttgggacagaggtagtac 153
||||||||||||| |||||||| ||||||||||
Sbjct: 36 aaaaattgctatattttgggacggaggtagtac 4
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttg 39
|||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataacaacttttg 37
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttg 39
|||| ||||||||||||||| ||||||||||||
Sbjct: 108 tactacctccatcccaaaatataacaacttttg 76
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||| || ||||| || |||| |||||| |||||| |||||||||||| ||
Sbjct: 5 tactccctccgtcttaaaatatagcaacctttgaatagatggggcacatcctagtactat 64
Query: 67 gaatctaga 75
|||||||||
Sbjct: 65 gaatctaga 73
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttg 39
|||| ||||| ||||||||||||||||||||||
Sbjct: 5 tactacctccgtcccaaaatgtaacaacttttg 37
>RF00906;MIR1122;AK243439.1/1155-1266 39947:Oryza sativa Japonica
Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 121 aaaaattgctatactttgggacagaggtagtac 153
||||||||||||| |||||||| ||||||||||
Sbjct: 77 aaaaattgctatattttgggacggaggtagtac 109
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatctaga 75
||||| ||||||||||||||| |||||||||||
Sbjct: 115 ggatgtgacacatcctagtaaaacgaatctaga 83
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||| ||||||||| ||| ||||| | ||||| |||||||||||||||||
Sbjct: 122 tactccctccgtcccaaaatataaggtattttggagggatgtgacacatcctagtaatat 63
Query: 67 gaatc 71
|||||
Sbjct: 62 gaatc 58
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaa 41
||||||||||| ||||||||| |||||| |||||||
Sbjct: 116 ctactccctccgtcccaaaatataacaatttttgaa 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 115 ccattcaaaaattgctatactttgggacagaggtagta 152
|||||||||||||| |||| |||||||| |||| ||||
Sbjct: 78 ccattcaaaaattgttatattttgggacggagggagta 115
>RF00906;MIR1122;AAAA02027999.1/6846-6708 39946:Oryza sativa Indica
Group
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaactttt 38
|||||| ||||||||||||| |||||||||||
Sbjct: 135 tactccttccatcccaaaatataacaactttt 104
>RF00906;MIR1122;AP008217.1/6570444-6570554 39947:Oryza sativa
Japonica Group
Length = 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 121 aaaaattgctatactttgggacagaggtagta 152
||||||||||||| |||||||| |||||||||
Sbjct: 76 aaaaattgctatattttgggacggaggtagta 107
>RF00906;MIR1122;AP008216.1/16113535-16113433 39947:Oryza sativa
Japonica Group
Length = 103
Score = 48.1 bits (24), Expect = 4e-05
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaac-ggatgggacacatcctagt 61
|||||||||||||||||||| || ||| | ||| || |||||||||||||||||||
Sbjct: 99 tactccctccatcccaaaatatagcaa-tcttgtactggatgggacacatcctagt 45
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 112 catccattcaaaaattgctatactttgggacagaggtagtacat 155
||||||| ||||||||||||| |||||||| |||| |||||||
Sbjct: 45 catccatctaaaaattgctatattttgggacggagggagtacat 2
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 4 atctactccctccatcccaaaatgtaacaacttttg 39
||||||||||||| ||||||||| || |||||||||
Sbjct: 2 atctactccctccgtcccaaaatatagcaacttttg 37
>RF00906;MIR1122;AACV01000380.1/14892-14782 39947:Oryza sativa
Japonica Group
Length = 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 121 aaaaattgctatactttgggacagaggtagta 152
|||||||| |||| ||||||||||||||||||
Sbjct: 36 aaaaattgttatattttgggacagaggtagta 5
>RF00906;MIR1122;CR855160.1/7113-7006 4530:Oryza sativa (rice)
Length = 108
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 88 cagattcttagtactaggtt--gtctcatccattcaaaaattgctatactttgggacaga 145
||||||| |||||||||| | ||| |||||| |||||||||||||| |||||||| ||
Sbjct: 71 cagattcgtagtactaggatacgtcccatccaaacaaaaattgctatattttgggacgga 12
Query: 146 ggtagta 152
|| ||||
Sbjct: 11 gggagta 5
>RF01058;MIR806;AP004314.3/57744-57514 39947:Oryza sativa Japonica
Group
Length = 231
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgt 28
|||||||||||||||||||||||
Sbjct: 1 ctactccctccatcccaaaatgt 23
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaat 26
|||||||||||||||||||||||
Sbjct: 104 atctactccctccatcccaaaat 82
>RF00906;MIR1122;AP008213.1/14562972-14563105 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatctagata 77
||||| ||||||| |||||| ||||||||||||||
Sbjct: 92 ggatgtgacacattctagtactacgaatctagata 58
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 ctccatcccaaaatgtaacaacttttg 39
|||| ||||||||||||||||||||||
Sbjct: 11 ctccgtcccaaaatgtaacaacttttg 37
>RF00906;MIR1122;AAAA02027850.1/6458-6302 39946:Oryza sativa Indica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 59 agtaatacgaatctagataaggg 81
|||||||||||||||||||||||
Sbjct: 101 agtaatacgaatctagataaggg 79
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 42 cggatgggacacatcctagtaatacgaatct 72
|||||| |||||||||||||| |||||||||
Sbjct: 116 cggatgtgacacatcctagtactacgaatct 86
>RF00906;MIR1122;AACV01012717.1/1860-1772 39947:Oryza sativa
Japonica Group
Length = 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgta 29
|||||||||||||||||||||||
Sbjct: 85 tactccctccatcccaaaatgta 63
>RF00906;MIR1122;AAAA02021800.1/3616-3483 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 43 ggatgggacacatcctagtaatacgaatctagata 77
||||| ||||||| |||||| ||||||||||||||
Sbjct: 43 ggatgtgacacattctagtactacgaatctagata 77
>RF00906;MIR1122;AC097277.6/29364-29210 39947:Oryza sativa
Japonica Group
Length = 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 42 cggatgggacacatcctagtaatacgaatct 72
|||||||||||||||||| || |||||||||
Sbjct: 40 cggatgggacacatcctattactacgaatct 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
|||||||||||||| ||||| |||||||||
Sbjct: 115 ggatgggacacatcgtagtactacgaatct 86
>RF00906;MIR1122;AP003913.3/29133-29264 39947:Oryza sativa Japonica
Group
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaat 26
|||||||||||||||||||||||
Sbjct: 131 atctactccctccatcccaaaat 109
>RF00906;MIR1122;AP005098.4/61806-61935 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
|||||| |||||||||||||| ||| ||||| | ||||| |||||||||||||| ||
Sbjct: 4 ctactctctccatcccaaaatataagggattttggatggatgtgacacatcctagtacta 63
Query: 66 cgaatct 72
||||||
Sbjct: 64 tgaatct 70
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 126 ttgctatactttgggacagaggtagta 152
|||||||| ||||||||||||||||||
Sbjct: 31 ttgctatattttgggacagaggtagta 5
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaatgtaa 30
||||||||||||| |||||||||||||
Sbjct: 104 atctactccctccgtcccaaaatgtaa 78
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 107 tgtctcatccattcaaaaattgctatactttgggacagaggtagtac 153
|||| |||||| |||||||||||||| |||||||| |||| |||||
Sbjct: 80 tgtcccatccacccaaaaattgctatattttgggacggagggagtac 126
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
||||||||||| ||||||||| || |||| || | |||||| ||||||||||| || |
Sbjct: 152 ctactccctccgtcccaaaatatagcaaccttgtaccggatgagacacatcctaatacaa 93
Query: 66 cgaatct 72
|||||||
Sbjct: 92 cgaatct 86
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaatgtaa 30
||||||||||||| |||||||||||||
Sbjct: 104 atctactccctccgtcccaaaatgtaa 78
>RF01058;MIR806;AACV01003083.1/6367-6128 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AAAA02012201.1/13112-12871 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AACV01014204.1/8063-7817 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AC091122.10/95035-95291 39947:Oryza sativa
Japonica Group
Length = 257
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AP008208.1/4546428-4546184 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AAAA02017994.1/11105-11327 39946:Oryza sativa
Indica Group
Length = 223
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AACV01009470.1/31639-31872 39947:Oryza sativa
Japonica Group
Length = 234
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AP008216.1/11024005-11024231 39947:Oryza sativa
Japonica Group
Length = 227
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF01058;MIR806;AACV01004668.1/17266-17495 39947:Oryza sativa
Japonica Group
Length = 230
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgt 28
||||||||||||||||||||||
Sbjct: 2 tactccctccatcccaaaatgt 23
>RF00906;MIR1122;AC127019.29/109198-109062 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 tctactccctccatcccaaaatgtaa 30
|||||||| |||||||||||||||||
Sbjct: 135 tctactccatccatcccaaaatgtaa 110
>RF00906;MIR1122;AAAA02030656.1/4636-4541 39946:Oryza sativa
Indica Group
Length = 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttg 39
||||||||||| | ||||||| ||||||||||||
Sbjct: 93 ctactccctccgttccaaaatataacaacttttg 60
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tctactccctccatcccaaaatgtaa 30
|||||||||||| |||||||||||||
Sbjct: 3 tctactccctccgtcccaaaatgtaa 28
>RF00906;MIR1122;AAAA02007712.1/608-473 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||| ||| ||||| || |||| | || || |||||||||||||||||| ||
Sbjct: 132 tactccctccgtcctaaaatatagcaacatgggaccgtatgggacacatcctagtattaa 73
Query: 67 gaatct 72
||||||
Sbjct: 72 gaatct 67
>RF00906;MIR1122;AAAA02016710.1/2442-2572 39946:Oryza sativa Indica
Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||||||| ||||| || |||| || | |||||||||| ||||||||| ||
Sbjct: 127 tactccctccatcctaaaatatagcaaccttgtactggatgggacatatcctagtacaac 68
Query: 67 gaatct 72
||||||
Sbjct: 67 gaatct 62
>RF00906;MIR1122;AC124836.2/101751-101630 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| ||||||| ||||||||||||||||
Sbjct: 41 ggatgtgacacatactagtaatacgaatct 70
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||| ||||||||| || |||| | || || |||||| ||||||||||| ||
Sbjct: 132 tactccctccgtcccaaaatatagcaacatgggaccgcatgggatacatcctagtattaa 73
Query: 67 gaatct 72
||||||
Sbjct: 72 gaatct 67
>RF00906;MIR1122;AAAA02022081.1/28856-28717 39946:Oryza sativa
Indica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccatcccaaaat 26
||||||||||||||||||||||
Sbjct: 138 tctactccctccatcccaaaat 117
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatccta 59
||||||||||| ||||||||| |||||| || || |||||||||| ||||||
Sbjct: 121 ctactccctccgtcccaaaatataacaatttcggattggatgggacatatccta 68
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| ||||||| ||||||||||||||||
Sbjct: 82 ggatgtgacacatactagtaatacgaatct 53
>RF00906;MIR1122;AP005830.4/102931-103039 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 123 aaattgctatactttgggacagaggtagta 152
||||||||||| |||||||| |||||||||
Sbjct: 76 aaattgctatattttgggacggaggtagta 105
>RF00906;MIR1122;AACV01007649.1/5705-5795 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaa 25
||||||||||||||||||||||
Sbjct: 90 atctactccctccatcccaaaa 69
>RF00906;MIR1122;AP008215.1/8288002-8287875 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccatcccaaaat 26
||||||||||||||||||||||
Sbjct: 126 tctactccctccatcccaaaat 105
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa Indica
Group
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaata 65
||||||||||| ||||| ||| || |||| | || ||||| |||| ||||||||| ||
Sbjct: 130 ctactccctccgtcccagaatatagcaacctaggaccggattagacatatcctagtacta 71
Query: 66 cgaatctaga 75
||||||||||
Sbjct: 70 cgaatctaga 61
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| |||||||||||||| |||||||||
Sbjct: 37 ggatgtgacacatcctagtactacgaatct 66
>RF00906;MIR1122;AAAA02012208.1/21065-20931 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggaca 52
|||||||||||||||||||| ||| ||| | || |||||||||||
Sbjct: 5 tactccctccatcccaaaatataagaacctaagatcggatgggaca 50
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| |||||||||||||| |||||||||
Sbjct: 41 ggatgtgacacatcctagtactacgaatct 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| |||||||||||||| |||||||||
Sbjct: 115 ggatgtgacacatcctagtactacgaatct 86
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| |||||||||||||| |||||||||
Sbjct: 94 ggatgtgacacatcctagtactacgaatct 65
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
||||| |||||||||||||| |||||||||
Sbjct: 116 ggatgtgacacatcctagtactacgaatct 87
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa Japonica
Group
Length = 161
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccatcccaaaat 26
||||||||||||||||||||||
Sbjct: 159 tctactccctccatcccaaaat 138
>RF00906;MIR1122;AP008210.1/14859890-14859756 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
|||||||||||||||||||| ||||||||
Sbjct: 95 ggatgggacacatcctagtacaacgaatct 66
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||| ||||||||| || ||| | ||| ||||||||||| ||||| || |||
Sbjct: 151 tactccctccgtcccaaaatagaagaacctatgatcggatgggacatttcctactactac 92
Query: 67 gaatct 72
||||||
Sbjct: 91 gaatct 86
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 7 tactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaatac 66
|||||||||||| ||||||| || |||| || | ||||||||||||| |||||| ||
Sbjct: 5 tactccctccattccaaaatatagcaaccttgtactggatgggacacattctagtacaac 64
Query: 67 gaatct 72
||||||
Sbjct: 65 gaatct 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 4 atctactccctccatcccaaaatgtaacaacttttgaacggatgggacacatcctagtaa 63
||||||||||||| ||||||||| || |||| || | ||||| ||||| ||||||||
Sbjct: 155 atctactccctccgtcccaaaatatagcaaccttgtactggatgagacacttcctagtac 96
Query: 64 tacgaatctagata 77
|||||||| ||||
Sbjct: 95 aacgaatctggata 82
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttg 39
||||| ||||| ||||||||| ||||||||||||
Sbjct: 109 ctactacctccgtcccaaaatataacaacttttg 76
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 ctactccctccatcccaaaatgtaacaacttttg 39
||||||||||| ||||||||| |||||| |||||
Sbjct: 116 ctactccctccgtcccaaaatataacaatttttg 83
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 ggatgggacacatcctagtaatacgaatct 72
|||||||||||||||||||| ||||||||
Sbjct: 41 ggatgggacacatcctagtacaacgaatct 70
