miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 115 bits (58), Expect = 1e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 112 ttcatattgatgttaatgaatctagacatatatatctatctagattcattaatatcaata 53
Query: 79 tgaatatgggaaaa 92
||||| ||||||||
Sbjct: 52 tgaatgtgggaaaa 39
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||||| | |||||| | |||||||||||||||||||||
Sbjct: 49 ttcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaata 108
Query: 79 tgaat 83
|||||
Sbjct: 109 tgaat 113
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 1e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 113 ttcatattaatgttaatgaatctagacatatatatccaactagattcattaacatccata 54
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 53 tgaatatggg 44
Score = 50.1 bits (25), Expect = 5e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||| |||||| | |||||||||||||||| ||||
Sbjct: 50 ttcatatggatgttaatgaatctagttggatatatatgtctagattcattaacattaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 113 bits (57), Expect = 4e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 87 ttcatattgatgttaatgaatctagacatatatatctatctagattcattaacatcaata 28
Query: 79 tgaat 83
|||||
Sbjct: 27 tgaat 23
Score = 89.7 bits (45), Expect = 6e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||| | |||||| | |||||||||||||||||||||
Sbjct: 24 ttcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaata 83
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 84 tgaatgtgggaaa 96
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 113 ttcatattgatgttaatgaatgtagacatatatatctatctagattcattaacatcaata 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||| | |||||| | ||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagatagatatatatgtctacattcattaacatcaata 109
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 110 tgaatgtgggaaa 122
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 50 ttcatattgatgttaatgaatctagacatatatatctatctagattcattaacattaata 109
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 110 tgaatgtgggaaa 122
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||||||||||||||||||||| | |||||| | |||||||||||||||||||||
Sbjct: 113 ttcatattaatgttaatgaatctagatagatatatatgtctagattcattaacatcaata 54
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 53 tgaatgtggg 44
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 113 ttcatattaatgttaatgaatctagacatatatatctatctagattcattaacactaata 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||||| |||||||||||||||| | |||||| | |||||||||||||||| ||||
Sbjct: 50 ttcatattagtgttaatgaatctagatagatatatatgtctagattcattaacattaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 113 bits (57), Expect = 4e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 24 ttcatattgatgttaatgaatctagacatatatatctatttagattcattaacatcaata 83
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 84 tgaatgtgggaaa 96
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||| | | |||||| | |||||||||||||||||||||
Sbjct: 87 ttcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaata 28
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 27 tgaatgtgggaaa 15
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagacatatatatctatctagattcattaatatcaatatga 112
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 113 atgtgggaaa 122
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||||| | |||||| | |||||||||||||||||||||
Sbjct: 113 ttcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaata 54
Query: 79 tgaatatgggaaa 91
| ||| |||||||
Sbjct: 53 taaatgtgggaaa 41
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 113 ttcatattgatggtaatgaatctagacatatatatctatctagattcattaacaacaata 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||||||| | |||||| | |||||||||||| ||||||||
Sbjct: 50 ttcatattgttgttaatgaatctagatagatatatatgtctagattcattaccatcaata 109
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 110 tgaatgtgggaaa 122
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctatacatatatatttatctagattcattaacatcaata 109
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 110 tgaatgtgggaaa 122
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||| | |||||| | ||||||||||||||||||||
Sbjct: 113 ttcatattgatgttaatgaatctagataaatatatatgtatagattcattaacatcaata 54
Query: 79 tgaatatgg 87
|||||||||
Sbjct: 53 tgaatatgg 45
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct: 113 ttcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaata 54
Query: 79 tgaatatgggaaa 91
||||||| |||||
Sbjct: 53 tgaatataggaaa 41
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||| | ||||| | ||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagatagatatagatgtctatattcattaacatcaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 7e-21
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 31 ttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgggaa 90
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 101 ttaatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaa 42
Query: 91 aatgtagaat 100
| |||||||
Sbjct: 41 atggtagaat 32
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||| | |||||| | ||||||||||||| ||||| |
Sbjct: 50 ttcatattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaaca 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 99.6 bits (50), Expect = 7e-21
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 110 atattgatgataatgaatctagacatatatatctatctagattcattaacataaatatga 51
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 50 atgtgggaaa 41
Score = 65.9 bits (33), Expect = 9e-11
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||| | |||||| | |||||||||||| ||||||||
Sbjct: 50 ttcatatttatgttaatgaatctagatagatatatatgtctagattcattatcatcaata 109
Query: 79 t 79
|
Sbjct: 110 t 110
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 7e-21
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 113 ttcatattgttgttaatgaatctagacatatatatctatctagattcattaacatcaata 54
Query: 79 tg 80
||
Sbjct: 53 tg 52
Score = 77.8 bits (39), Expect = 2e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 21 catattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
|||||| ||||||||||||||||| | |||||| | ||||||||||||||| |||||||
Sbjct: 52 catattgatgttaatgaatctagatagatatatatgtctagattcattaacaacaatatg 111
Query: 81 aatatgggaaa 91
||| |||||||
Sbjct: 112 aatgtgggaaa 122
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||||||||||||||||||||| | |||||| || ||||||||||||| |||||||
Sbjct: 50 ttcatattaatgttaatgaatctagataaatatatatatctagattcattaatatcaata 109
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 110 tgaatgtgggaaa 122
Score = 83.8 bits (42), Expect = 4e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||||| |||||||| || |||||||||||||||| ||||
Sbjct: 113 ttcatattgatattaatgaatctagatatatatatttatctagattcattaacattaata 54
Query: 79 tgaatatgggaaaa 92
||||| ||| ||||
Sbjct: 53 tgaatgtggaaaaa 40
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 113 ttcatattgatattaatgaatctagacatatatatctatctagattcattaacatcaata 54
Query: 79 t 79
|
Sbjct: 53 t 53
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| ||||||||||||||||| | |||||| | ||||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 113 atgtgggaaa 122
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 50 ttcatattgatattaatgaatctagacatatatatctatctagattcattaaaatcaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||||| | |||||| | ||||||||||||| |||||||
Sbjct: 113 ttcatattgattttaatgaatctagatagatatatatgtctagattcattaatatcaata 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| ||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 110 atattgatggtaatgaatctagaaatatatatctatctagattcattaacgtcaatatga 51
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 50 atgtgggaaa 41
Score = 65.9 bits (33), Expect = 9e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| | ||||||||||||||| | |||||| | |||||||||||| ||||||||
Sbjct: 50 ttcatattgacgttaatgaatctagatagatatatatttctagattcattaccatcaata 109
Query: 79 tgaatatgggaaa 91
| ||| |||||||
Sbjct: 110 ttaatgtgggaaa 122
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 117 ttcatagtgatgttaatgaatctagacatatatatctatctagattcattaacatcacta 58
Query: 79 tg 80
||
Sbjct: 57 tg 56
Score = 71.9 bits (36), Expect = 1e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
||||||||||||||||| | |||||| | |||||||||||||||||| ||||||| |||
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgg 122
Query: 88 gaaa 91
||||
Sbjct: 123 gaaa 126
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatgtagacatatatatgt--ctagattcattaacatcaata 107
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 108 tgaatgtgggaaa 120
Score = 83.8 bits (42), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 111 ttcatattgatgttaatgaatctagacatatatatgt--ctacattcattaacatcaata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||| |
Sbjct: 53 atattgatgtttatgaatctagacatatatttctatctagattcattaacatcaatataa 112
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 113 atgtgggaaa 122
Score = 60.0 bits (30), Expect = 6e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| ||||||||||||||||| | | |||| | |||||||||| ||||||||||| |
Sbjct: 110 atattgatgttaatgaatctagatagaaatatatgtctagattcataaacatcaatataa 51
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 50 atgtgggaaa 41
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 89.7 bits (45), Expect = 6e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||
Sbjct: 112 ttcatattgatgttaatgaatctaaacatatgtatgt-gctagattcattaacatcaata 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
Score = 69.9 bits (35), Expect = 6e-12
Identities = 66/74 (89%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctag-acatatatatctagctagattcattaacatcaat 77
|||||||| |||||||||||||||| ||||| |||| | |||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagcacatacatatgtt--tagattcattaacatcaat 107
Query: 78 atgaatatgggaaa 91
|||||| |||||||
Sbjct: 108 atgaatgtgggaaa 121
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 6e-18
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagacatatatatctatatagatttattaacatcaata 109
Query: 79 t 79
|
Sbjct: 110 t 110
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| |||||||| |||||| | | |||||| | ||||||||||||||||||||||||
Sbjct: 110 atattgatgttaataaatctatatagatatatatgtctagattcattaacatcaatatga 51
Query: 82 atatgggaaa 91
||||||||||
Sbjct: 50 atatgggaaa 41
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| ||||||||||| ||||||||||||| ||| |||||||| ||||||||
Sbjct: 113 ttcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatcaata 54
Query: 79 tgaatatgg 87
|||||||||
Sbjct: 53 tgaatatgg 45
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| |||||||| |||| | |||||| | ||||||||||| ||||||||
Sbjct: 50 ttcatattgatgctaatgaatttagatagatatatatgtttagattcattagcatcaata 109
Query: 79 tgaatatgggaaa 91
|||||||| ||||
Sbjct: 110 tgaatatgagaaa 122
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 113 ttcatattgatgctaatgaatctagacatatatatctatctagagtcattaacatcaata 54
Query: 79 tgaat 83
||||
Sbjct: 53 cgaat 49
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 23 tattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaa 82
|||| |||||||||| |||||| | |||||| | |||||||||||| ||||||||||||
Sbjct: 54 tattgatgttaatgactctagatagatatatatgtctagattcattagcatcaatatgaa 113
Query: 83 tat 85
|||
Sbjct: 114 tat 116
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 6e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 111 ttcatattgatgttaatgaatctagacatatatatctatatagatttattaacatcaata 52
Query: 79 t 79
|
Sbjct: 51 t 51
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| |||||||| |||||| | | |||||| | ||||||||||||||||||||||||
Sbjct: 51 atattgatgttaataaatctatatagatatatatgtctagattcattaacatcaatatga 110
Query: 82 atatgggaaa 91
||||||||||
Sbjct: 111 atatgggaaa 120
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 113 ttcatattgatgctaatgaatctagacatatatatctatctagattcattagtatcaata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || ||||||||||||| | |||||| | |||||||||||| ||||||||
Sbjct: 50 ttcatattgatactaatgaatctagatagatatatatgtctagattcattagcatcaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 6e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||| | ||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 50 ttcatagtgatgttaatgaatctagacatatatatctatttagattcattaatatcaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
Score = 65.9 bits (33), Expect = 9e-11
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||| | | |||||| | |||||||||||||||||| ||
Sbjct: 113 ttcatattgatattaatgaatctaaatagatatatatgtctagattcattaacatcacta 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacatatatatgtgtctagattcattaacatctata 109
Query: 79 tgaatatg 86
||||||||
Sbjct: 110 tgaatatg 117
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| |||||| | ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagacacatatatatgtctagattcattaacatctata 54
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 53 tgaatgtggg 44
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 29 tgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 60 tgttaatgaatctagacatatatatctatttagattcattaatatcaatatgaat 114
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| || |||||||||||| | | |||||| | ||||||||||||||| |||||
Sbjct: 113 ttcatattgatattaatgaatctaaatagatatatatgtctagattcattaacaccaata 54
Query: 79 tgaatatgggaaa 91
| ||| |||||||
Sbjct: 53 taaatgtgggaaa 41
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 4e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||| ||| || |||| |||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctata 54
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 53 tgaatatggg 44
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||| ||||| ||||| || | ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 83.8 bits (42), Expect = 4e-16
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||||||||||||||||||||| |||||| |||| |||||||||||| |||||||||||
Sbjct: 109 atattaatgttaatgaatctagatatatat-tctatctagattcattaccatcaatatga 51
Query: 82 at 83
||
Sbjct: 50 at 49
Score = 65.9 bits (33), Expect = 9e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| ||||||||||||| | | |||| || |||||||||||||||| ||||
Sbjct: 50 ttcatattgatggtaatgaatctagataga-atatatatctagattcattaacattaata 108
Query: 79 tgaatatgggaaa 91
| |||||||||||
Sbjct: 109 taaatatgggaaa 121
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 4e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||| ||| || |||| |||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctata 109
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 110 tgaatatggg 119
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||| ||||| ||||| || | ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaac 71
|||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 50 ttcatattgatattaatgaatctagacatatatatctatctagattcattaac 102
Score = 67.9 bits (34), Expect = 2e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 30 gttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggga 89
||||||||||||||| | |||||| | ||||||||||||| |||||||||||| |||||
Sbjct: 102 gttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtggga 43
Query: 90 aa 91
||
Sbjct: 42 aa 41
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||||||||||||||||| |||||| ||| ||||| || ||||
Sbjct: 113 ttcatattgatgttaatgaatctagacatatatatttagctaaatttattaatataaata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 89 ctagattcattaacatcaatatgaatgtgggaaa 122
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/64 (92%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||
Sbjct: 52 atgttaatgaatctagatagatatatgt--ctagattcattaacatcaatatgaatatgg 109
Query: 88 gaaa 91
||||
Sbjct: 110 gaaa 113
Score = 79.8 bits (40), Expect = 6e-15
Identities = 55/59 (93%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaat 77
|||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 104 ttcatattgatgttaatgaatctagacat--atatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 33 aatgaatctagacatatatatctagctagattcattaacatcaatatg 80
|||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattagcatcaatatg 111
Score = 46.1 bits (23), Expect = 8e-05
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 21 catattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
|||||| ||| ||||||||||||| | |||||| | ||||||||||| |||| |||||
Sbjct: 111 catattgatgctaatgaatctagatagatatatatgtctagattcattggcatcgatatg 52
Query: 81 aat 83
|||
Sbjct: 51 aat 49
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 29 tgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
||||||||||||||||||| ||||| || ||||||||||||||| | |||||||| ||||
Sbjct: 103 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 44
Query: 89 aaa 91
|||
Sbjct: 43 aaa 41
Score = 54.0 bits (27), Expect = 3e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 29 tgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||||||||||| ||||||| | ||||||||||||||| | ||||||||
Sbjct: 60 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaat 114
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 77.8 bits (39), Expect = 2e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 29 tgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
||||||||||||||||||| ||||| || ||||||||||||||| | |||||||| ||||
Sbjct: 30 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 89
Query: 89 aaa 91
|||
Sbjct: 90 aaa 92
Score = 54.0 bits (27), Expect = 3e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 29 tgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||||||||||| ||||||| | ||||||||||||||| | ||||||||
Sbjct: 73 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaat 19
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 75.8 bits (38), Expect = 9e-14
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagatt 64
|||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 50 ttcatattgatgttaatgaatctagacatatatatctatctagatt 95
Score = 61.9 bits (31), Expect = 1e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 37 aatctagacatatatatctagctagattcattaacatcaatatgaatatgggaaa 91
|||||||| | |||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaa 41
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| |||||||| | ||||||||||||||||| |||
Sbjct: 26 ttcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctata 85
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 86 tgaatgtggg 95
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||| || |||||| || |||||||||||||||| |||
Sbjct: 89 ttcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatatata 30
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 29 tgaatgtggg 20
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 9e-14
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||| ||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 89 ttcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctata 30
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 29 tgaatgtggg 20
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| |||||| | ||||||||||| ||||| |||
Sbjct: 26 ttcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctata 85
Query: 79 tgaat 83
|||||
Sbjct: 86 tgaat 90
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| |||||||||||||||||| ||||||| | |||||||||||| |||| |||
Sbjct: 113 ttcatattgatgttaatgaatctagacttatatatatgcctagattcattagcatctata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 50 ttcatatagatgctaatgaatctaggcatatatataagtctagattcattaacatcaata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||| ||||| || ||||||||| |||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatctata 109
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 110 tgaatgtgggaaa 122
Score = 50.1 bits (25), Expect = 5e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||| ||||||||| | ||||||| | ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttgatgaatctaaatatatatagatgtctagattcattaacatctata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||||| | || || ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacatagacatatatctagattcattaacatccata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
Score = 61.9 bits (31), Expect = 1e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| |||| | | | ||||||||||||||||| |||
Sbjct: 113 ttcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatctata 54
Query: 79 tgaatat 85
|||||||
Sbjct: 53 tgaatat 47
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 71.9 bits (36), Expect = 1e-12
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 111 ttcatataaatgttaatgaatctagacacgcatat--acctagattcattaacatcaata 54
Query: 79 tgaatat 85
|||||||
Sbjct: 53 tgaatat 47
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 21 catattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
|||||| ||| ||||||||||||||||||||||| ||||||||||||| || | ||||
Sbjct: 111 catattgatgctaatgaatctagacatatatatccgtctagattcattaatataagtatg 52
Query: 81 aatatgggaaa 91
||| |||||||
Sbjct: 51 aatgtgggaaa 41
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 31 ttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
||||||||||||||| |||||| | |||||||||||| ||||||||||
Sbjct: 62 ttaatgaatctagacggatatatatgtctagattcattagcatcaatatg 111
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| |||| | | || ||||||||||||||||| |||
Sbjct: 50 ttcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatctata 109
Query: 79 tgaatat 85
|||||||
Sbjct: 110 tgaatat 116
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| ||| | || || ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagatatagacatatatctagattcattaacatccata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 22 atattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatga 81
||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 108 atattgatgttaatgaatctggacatatgc--ctatctagattcattaacatcaatatga 51
Query: 82 atatgggaaa 91
|| |||||||
Sbjct: 50 atgtgggaaa 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||||||||||||
Sbjct: 70 ctagattcattaacatcaatatgaatatgggaaa 103
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagaca 46
|||||||| |||||||||||||||||||
Sbjct: 94 ttcatattgatgttaatgaatctagaca 67
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 50 atatctagctagattcattaacatcaatatgaatatgggaaa 91
||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaa 42
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 51 ttcatattgatgttaatgaatctaga 76
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 30 gttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggga 89
|||| |||||||||||||||||||||| |||||||| |||| || |||||||||| |||
Sbjct: 102 gttagtgaatctagacatatatatctatatagattcactaacctctatatgaatatagga 43
Query: 90 aa 91
||
Sbjct: 42 aa 41
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctata 54
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 53 tgaatatggg 44
Score = 60.0 bits (30), Expect = 6e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||| |||||| |||| | ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctata 109
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 110 tgaatatggg 119
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctata 54
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 53 tgaatatggg 44
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||| |||||| |||| | ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctata 109
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 110 tgaatgtggg 119
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatatgggaaa 41
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagaca 46
|||||||| |||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagaca 77
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||| ||| | | ||||||||||||||||| |||
Sbjct: 26 ttcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatctata 85
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 86 tgaatgtggg 95
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | |||| || ||||||||||||||||| ||
Sbjct: 50 ttcatatagatgttaatgaatctagacacacatatatatctagattcattaacatctatg 109
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 110 tgaatgtggg 119
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
||||||||||||||||| |||||| | | ||||||||||||||||| ||||||||
Sbjct: 104 atgttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||| ||||||| | | |||||||||||||||| |||
Sbjct: 89 ttcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaacatatata 30
Query: 79 tgaatatggg 88
||||||||||
Sbjct: 29 tgaatatggg 20
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||| |||| |||| | ||||||||||||||||| |||
Sbjct: 26 ttcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatctata 85
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 86 tgaatgtggg 95
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 67.9 bits (34), Expect = 2e-11
Identities = 63/73 (86%), Gaps = 6/73 (8%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 107 ttcatattgatgctaatgaatctagacatatat------ctagattcattagcatcaata 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
|||||||||||| |||||||||||||
Sbjct: 83 ctagattcattagcatcaatatgaat 108
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | |||| | ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacacacatatatttctagattcattaacatctata 109
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 110 tgaatgtggg 119
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| |||||| | | ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatatgggaaa 41
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||||||||||||
Sbjct: 71 ctagattcattaacatcaatatgaatatgggaaa 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 95 ttcatattgatgttaatgaatctaga 70
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | |||| | ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagacacacatatatttctagattcattaacatctata 54
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 53 tgaatgtggg 44
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| |||||| | | ||||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 50 atatctagctagattcattaacatcaatatgaatatgggaaa 91
||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaa 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 91 ttcatattgatgttaatgaatctaga 66
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 9e-11
Identities = 61/70 (87%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 16 ttcatatatatgttaatgaatctagacatatatat----ctagattcattaacatatata 71
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 72 tgaatgtggg 81
Score = 50.1 bits (25), Expect = 5e-06
Identities = 59/70 (84%), Gaps = 4/70 (5%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||| |||||| | |||||||||||||||| |||
Sbjct: 75 ttcatatatatgttaatgaatctagatatatatgt----ctagattcattaacatatata 20
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 19 tgaatgtggg 10
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||||||||||||| | | |||||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatctata 109
Query: 79 tgaat 83
|||||
Sbjct: 110 tgaat 114
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||| ||| | |||| | ||||||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctata 54
Query: 79 tgaat 83
|||||
Sbjct: 53 tgaat 49
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
|||||||||||||||||||||| ||| || |||||||||||||||| |||||
Sbjct: 59 atgttaatgaatctagacatatgtatgtatttagattcattaacatccatatg 111
Score = 50.1 bits (25), Expect = 5e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
||||||||||||||| | | ||| || | ||||||||||||||||| | ||||||||||
Sbjct: 104 atgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgg 45
Query: 88 g 88
|
Sbjct: 44 g 44
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
|||||||||||||||||||||||||| | |||||||||||||||| | |||||| |||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgg 45
Query: 88 g 88
|
Sbjct: 44 g 44
Score = 54.0 bits (27), Expect = 3e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatc 74
||||||||||||||| ||| |||||| | |||||||||||||||||
Sbjct: 59 atgttaatgaatctaaacacatatatatgtctagattcattaacatc 105
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 48 atatatctagctagattcattaacatcaatatgaatatgggaaa 91
||||||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaa 109
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||| ||||||||||||||||||| |||||||
Sbjct: 48 ctagatacattaacatcaatatgaatgtgggaaa 15
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 63.9 bits (32), Expect = 4e-10
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 18 gttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaat 77
||||||||| || |||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 77 gttcatattgatattaatgaatctagat---tatatctatctagattcattaatatcaat 21
Query: 78 atgaatatgggaaa 91
||||| |||||||
Sbjct: 20 atgaacgtgggaaa 7
Score = 56.0 bits (28), Expect = 9e-08
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 18 gttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaat 77
||||||||| || |||||||||||||| | ||||| | ||||||||||||| ||||||
Sbjct: 15 gttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaat 71
Query: 78 atgaatatgggaaa 91
||||| |||||||
Sbjct: 72 atgaacgtgggaaa 85
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 33 aatgaatctagacatatatatctagctagattcattaacatcaatatg 80
||||||||||||||||||||| || |||||||||||| |||| |||||
Sbjct: 64 aatgaatctagacatatatatttatctagattcattagcatcgatatg 111
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 44 acatatatatctagctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||| |||||||||||| ||||||||| |||||| ||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaa 41
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 22 atattaatgttaatgaatctagacatatatat 53
||||||||||||||||||||||||||||||||
Sbjct: 53 atattaatgttaatgaatctagacatatatat 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||| ||||| ||| |||||||
Sbjct: 74 ctagattcattaacattaatataaatgtgggaaa 41
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 29 tgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
||||||||||||||||||| | ||| || |||||||||||||||| ||||| ||||||
Sbjct: 60 tgttaatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatgg 118
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgg 87
||||||||||||||||||||||||||||||
Sbjct: 76 ctagattcattaacatcaatatgaatatgg 105
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagac 45
|||||||| ||||||||||||||||||
Sbjct: 100 ttcatattgatgttaatgaatctagac 74
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 6e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||| | ||||||||||||||||| |||||||| | ||| |||||||||||| | ||
Sbjct: 111 ttcatactcatgttaatgaatctagatatatatatgt--ctaaattcattaacatgagta 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
Score = 60.0 bits (30), Expect = 6e-09
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||| | |||||||||||| |||||||||||| || |||||||||||||||| | ||
Sbjct: 50 ttcatactcatgttaatgaatttagacatatata--tatctagattcattaacatgagta 107
Query: 79 tgaat 83
|||||
Sbjct: 108 tgaat 112
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 6e-09
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
|||||||||||||||||||||| | | | ||||||||||||||||| |||||||| |||
Sbjct: 102 atgttaatgaatctagacatatgtgtgt--ctagattcattaacatctatatgaatgtgg 45
Query: 88 g 88
|
Sbjct: 44 g 44
Score = 56.0 bits (28), Expect = 9e-08
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | |||| | ||||||||||||||||| | |
Sbjct: 50 ttcatatagatgttaatgaatctagacacacatatgt--ctagattcattaacatctaga 107
Query: 79 tgaatat 85
|||||||
Sbjct: 108 tgaatat 114
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaa 41
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatat 85
||||||||||||||||||||||||||||
Sbjct: 77 ctagattcattaacatcaatatgaatat 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 101 ttcatattgatgttaatgaatctaga 76
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||| ||||||||||| |||||| | | || ||||||||||||||||| |||
Sbjct: 113 ttcatatagatggtaatgaatctaaacatatgtctatatctagattcattaacatctata 54
Query: 79 tgaatatggg 88
|| |||||||
Sbjct: 53 tgcatatggg 44
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||| |||||||||||||||||||||
Sbjct: 67 ctagattcattagcatcaatatgaatatgggaaa 100
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaa 41
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatata 50
|||||||| |||||||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagacatata 81
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaa 41
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 80 ctagattcattaacatcaatatgaatgtgggaaa 113
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaa 41
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatata 52
|||||||| |||||||||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctagacatatata 83
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 77 ctagattcattaacatcaatatgaatgtgggaaa 110
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatat 85
||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatat 47
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 101 ttcatattgatgttaatgaatctaga 76
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 38 atctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||||||| |||||| ||| | ||||||||||||||||||||
Sbjct: 63 atctagacatatgtatctatctaaactcattaacatcaatatgaat 108
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||| ||||||||||||||||| | | |||||||||||||| |||
Sbjct: 50 ttcatatatatgttaataaatctagacatatatatgtgccaagattcattaacatatata 109
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 110 tgaatgtggg 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||||||||||||| | || |||||| | ||||||| |||||||| |||
Sbjct: 113 ttcatatatatgttaatgaatcttggcacatatatatgtctagatttattaacatatata 54
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 53 tgaatgtggg 44
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||||||||||||| |||||||
Sbjct: 66 ctagattcattaacatcaatatgaatgtgggaaa 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 90 ttcatattgatgttaatgaatctaga 65
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||| ||||||||||||||||||||||||||
Sbjct: 67 ctagatttattaacatcaatatgaatatgggaaa 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatata 52
|||||||| |||||||| ||||||||||| ||||
Sbjct: 91 ttcatattgatgttaataaatctagacatttata 58
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 50 atatctagctagattcattaacatcaatatgaat 83
||||||| ||||||||||||||||||||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaat 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 85 ttcatattgatgttaatgaatctaga 60
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 55 tagctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||| ||||||||||||| |||||||
Sbjct: 77 tagctagattcattagcatcaatatgaatgtgggaaa 41
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
|||||||||||| |||| ||| || | | ||||||||||||||||| ||||||||||||
Sbjct: 59 atgttaatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgg 118
Query: 88 g 88
|
Sbjct: 119 g 119
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | || | || ||| ||||||||||||| |||
Sbjct: 113 ttcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctata 54
Query: 79 tg 80
||
Sbjct: 53 tg 52
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 acatatatatctagctagattcattaacatcaatatg 80
|||| |||||||| |||||||||||||||||||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatg 83
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||| ||||||||||||||||||||| | |||||||||| ||||| |||
Sbjct: 50 ttcatatatatgtcaatgaatctagacatatatatgtgtttagattcattgacatctata 109
Query: 79 tgaatatgg 87
|||| ||||
Sbjct: 110 tgaagatgg 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| |||| |||||||||| ||| |||||| | ||||||||||| |||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 53 tgaatgtggg 44
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
||||||||||||| |||||||||||| | |||||||||||||||| ||||||||
Sbjct: 59 atgttaatgaatcaagacatatatatgca--tagattcattaacatctatatgaat 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||| ||||||||| | || |||||||||||||| | |
Sbjct: 111 ttcatatagatgttaatgaatctatgcatatatatgt--cttgattcattaacatctaca 54
Query: 79 tgaatatgggaaa 91
||||| |||||||
Sbjct: 53 tgaatgtgggaaa 41
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 35 tgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||||||||| |||| | ||||||||||| ||||||||||||||
Sbjct: 66 tgaatctagacatacatatatgtctagattcattgacatcaatatgaat 114
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatat 51
|||||||| |||| |||||||||||||||||||
Sbjct: 113 ttcatattgatgtcaatgaatctagacatatat 81
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 55 tagctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||| ||||||||||||| |||||||
Sbjct: 71 tagctagattcattagcatcaatatgaatgtgggaaa 107
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaa 41
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/64 (84%), Gaps = 8/64 (12%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
|||||||| ||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaaacatat--------ctagattcattaacatcaata 101
Query: 79 tgaa 82
||||
Sbjct: 102 tgaa 105
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaa 94
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaa 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatat 49
|||||||| ||||||||||||||| ||||||
Sbjct: 95 ttcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 9e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
|||||| |||||||||||||||||| || |||||||| ||||||| |||| ||||||
Sbjct: 104 atgttagtgaatctagacatatatacatacttagattcactaacatctatatcaatatga 45
Query: 88 gaaa 91
||||
Sbjct: 44 gaaa 41
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 56.0 bits (28), Expect = 9e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 32 taatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
||||||||||||||| ||||| || |||||||||||||||| ||||||||
Sbjct: 63 taatgaatctagacacatataagtatatagattcattaacatctatatgaat 114
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatat 85
||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatat 47
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatata 50
|||||||| |||||||||||||||||||||||
Sbjct: 94 ttcatattgatgttaatgaatctagacatata 63
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 70 ctagattcattaacatcaatatgaat 95
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 61 gattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||| |||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaa 41
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 gattcattaacatcaatatgaat 83
|||||||||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaat 97
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 21 catattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
|||||| || || ||| |||||||||||| |||||| ||| | ||||||||||| |||||
Sbjct: 111 catattcatattgatgtatctagacatatgtatctatctaaactcattaacatcgatatg 52
Query: 81 aat 83
|||
Sbjct: 51 aat 49
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
||||||| ||||||||||||||||||||||||||
Sbjct: 87 ttcatatagatgttaatgaatctagacatatatat 53
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||| ||||||||
Sbjct: 63 ctagattcattaacatctatatgaat 88
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||| |||||||||||||||||||||| | ||| |||||||||||| |||
Sbjct: 113 ttcatatagatgctaatgaatctagacatatatatgtgtataggttcattaacatctata 54
Query: 79 tga 81
|||
Sbjct: 53 tga 51
Score = 50.1 bits (25), Expect = 5e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 87
||||||||||| ||| ||| |||||| | |||||||||||| |||| |||||||| |||
Sbjct: 59 atgttaatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgg 118
Query: 88 g 88
|
Sbjct: 119 g 119
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatg 86
|||||||||||||||||||||| ||| | ||||||||||||| || ||||| |||||
Sbjct: 104 atgttaatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatg 46
Score = 54.0 bits (27), Expect = 3e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 30 gttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
||||||||||||| ||| ||| || | ||||||||||||||||| | |||||||||||
Sbjct: 61 gttaatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatggg 119
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
|||||||| ||| ||||||||||||||||||||||
Sbjct: 87 ttcatattgatgataatgaatctagacatatatat 53
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaata 84
|||||||||||| ||||||||||||||
Sbjct: 63 ctagattcattatcatcaatatgaata 89
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 49 tatatctagctagattcattaacatcaatatgaatatgggaaa 91
|||||||| |||||||||||| |||||||||||| |||||||
Sbjct: 83 tatatctatctagattcattagtatcaatatgaatgtgggaaa 41
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatggga 89
||||||||||||||||||||||||| |||||
Sbjct: 64 tagattcattaacatcaatatgaatgtggga 94
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
||||||| ||||||||||||||||||||||||||
Sbjct: 87 ttcatatatatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 gattcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||||| |||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaa 98
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 45 catatatatctagctagattcattaacatcaatatgaatatgg 87
||||||||| | |||||||||||||||| |||||||||||||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatgg 94
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
||||||||||||||||||||||||||
Sbjct: 89 ttcatattaatgttaatgaatctaga 64
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||| ||||||||||||||||||| |||||||
Sbjct: 60 ctagatccattaacatcaatatgaatgtgggaaa 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatat 51
|||||||| ||||||||| ||||||||||||||
Sbjct: 84 ttcatattgatgttaatggatctagacatatat 52
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 62 attcattaacatcaatatgaatatgg 87
||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgg 45
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 54 ctagattcattaacatcaatatgaat 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 78 ttcatattgatgttaatgaatctaga 53
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||| |||||||||||||| |||||||
Sbjct: 40 ctagattcattgacatcaatatgaatgtgggaaa 7
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||| |||||||||||||| |||||||
Sbjct: 49 ctagattcattgacatcaatatgaatgtgggaaa 82
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||| ||||||||||||||||||||| |||||||
Sbjct: 77 ctagtttcattaacatcaatatgaatgtgggaaa 110
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatatgaat 83
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacata 48
|||||||| ||||||||||| |||||||||
Sbjct: 101 ttcatattgatgttaatgaaactagacata 72
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatat 53
||||||||||||||||||||||||||
Sbjct: 59 atgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||| |||||||||||||| |||||||
Sbjct: 74 ctagattcattgacatcaatatgaatgtgggaaa 41
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 61 ctagattcattaacatcaatatgaat 86
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatat 51
|||||||| ||||||||||||||||| ||||||
Sbjct: 85 ttcatattgatgttaatgaatctagatatatat 53
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 62 attcattaacatcaatatgaatatgg 87
||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgg 45
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||| |||||||||||| |||||||
Sbjct: 46 ctagattcattaatatcaatatgaatgtgggaaa 79
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatat 51
|||||||| ||||||||||||||||||| ||||
Sbjct: 50 ttcatattgatgttaatgaatctagacaaatat 82
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||| |||||||||||||| |||||||
Sbjct: 74 ctagattcattgacatcaatatgaatgtgggaaa 41
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||| |||||||||||||| |||||||
Sbjct: 83 ctagattcattgacatcaatatgaatgtgggaaa 116
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 atatctagctagattcattaacatcaatat 79
||||||| ||||||||||||||||||||||
Sbjct: 53 atatctatctagattcattaacatcaatat 82
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 50 ttcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||| ||||||||| |||||||||||
Sbjct: 74 ctagattcattagcatcaatataaatatgggaaa 41
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatata 52
|||||||| || ||||||||||||||||||||||
Sbjct: 90 ttcatatttatattaatgaatctagacatatata 57
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||||||||| || ||||||||| |||||||
Sbjct: 66 ctagattcattaatataaatatgaatgtgggaaa 99
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 78 ctagattcattaacatcaatatgaat 103
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagaca 46
|||||||| |||||||||||||||||||
Sbjct: 102 ttcatattgatgttaatgaatctagaca 75
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||||||||||||
Sbjct: 58 ctagattcattaacatcaatatgaat 83
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||| |||||||||||||||||
Sbjct: 82 ttcatattgatgttaatgaatctaga 57
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatg 86
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatctatatgaatatg 46
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatggg 88
|||||||||||| |||| |||||||||||||
Sbjct: 71 ctagattcattagcatctatatgaatatggg 101
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaat 83
|||||||||||||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaat 96
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatat 49
|||||||| ||||||||||||||| ||||||
Sbjct: 95 ttcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatatgaat 83
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 50.1 bits (25), Expect = 5e-06
Identities = 46/52 (88%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 40 ctagacatatatatctagctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||| | ||||||| |||| ||||||||||||| |||||||
Sbjct: 61 ctagacatatatatgt--ctagatttattagcatcaatatgaatgtgggaaa 110
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
|||||||| ||| ||||||| ||||||||||||||
Sbjct: 16 ttcatattgatgctaatgaaactagacatatatat 50
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
|||||||| ||| |||| |||||||||||||||||
Sbjct: 101 ttcatattgatgctaataaatctagacatatatat 67
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||| ||||||| ||||||||||||| |||||||
Sbjct: 40 ctagtttcattagcatcaatatgaatgtgggaaa 7
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 32 taatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
|||||||||||||||||||| | | |||||||||||| ||| |||||||| ||||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtggg 119
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatat 51
|||||||| ||| ||||||||||||||||||||
Sbjct: 80 ttcatattgatgctaatgaatctagacatatat 48
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
|||||||||||| |||||||||||||
Sbjct: 56 ctagattcattagcatcaatatgaat 81
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatgggaaa 91
|||||||||||| ||||||||||||||| ||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaa 90
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatgggaaa 91
||||| ||||||||||||||||||| |||||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaa 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
|||||| |||||||||||||||||||
Sbjct: 74 ctagatacattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | || | || ||| ||||||||||||| |||
Sbjct: 50 ttcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctata 109
Query: 79 t 79
|
Sbjct: 110 t 110
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||||||| |||| ||| || | | ||||||||||||||||| ||||||||
Sbjct: 104 atgttaatgaatttagatatagatgtgtgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatatgaatatgggaaa 91
|||||||||||||||| |||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaa 41
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 ttcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||| |||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaa 41
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 5e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 31 ttaatgaatctagacatatatatctagctagattcattaacatcaatat 79
|||||||||||||| |||| ||| | ||||||||||||||||| ||||
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacatctatat 51
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaa 70
||||||||||||||||| | ||| || || |||||||||||||
Sbjct: 57 atgttaatgaatctagaaacatacatatatctagattcattaa 99
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 ttcattaacatcaatatgaatatgggaaa 91
||||||||||||||||||||| |||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaa 41
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaat 83
|||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaat 86
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatata 50
|||||||| |||| ||||||||||||||||||
Sbjct: 93 ttcatatttatgtcaatgaatctagacatata 62
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 64/76 (84%), Gaps = 6/76 (7%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatat--atatc----tagctagattcattaaca 72
||||||| ||||||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 91 ttcatatggatgttaatgaatctagacacattaatatccatatatctagattcattaaca 32
Query: 73 tcaatatgaatatggg 88
|| |||||||| ||||
Sbjct: 31 tccatatgaatgtggg 16
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatggg 88
||||||||||||||||| |||||||| ||||
Sbjct: 67 ctagattcattaacatccatatgaatgtggg 97
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 21 catattaatgttaatgaatctagacatatatatctagctagattcattaacatcaatatg 80
||||| |||||||||||||||| ||| ||| || | |||||||||||| |||| | |||
Sbjct: 52 catataaatgttaatgaatctaaacacatacatatgtctagattcattagcatctaaatg 111
Query: 81 aatatggg 88
||| ||||
Sbjct: 112 aatttggg 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 32 taatgaatctagacatatatatctagctagattcattaacat 73
|||||||||||||||||| ||| | |||||||||||||||
Sbjct: 100 taatgaatctagacatatgtatgtgtttagattcattaacat 59
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 60 agattcattaacatcaatatgaatatgggaaa 91
|||||||||| ||||||||||||| |||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaa 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 attaacatcaatatgaatatgggaaa 91
|||||||||||||||||| |||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaa 101
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 attaatgttaatgaatctagacatatat 51
||||||||||||||||||||||| ||||
Sbjct: 55 attaatgttaatgaatctagacagatat 82
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatata 50
||||||| |||||||||||||||||||||||
Sbjct: 50 ttcatatagatgttaatgaatctagacatata 81
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatggg 88
||||||||||||||||| |||||||| ||||
Sbjct: 74 ctagattcattaacatctatatgaatgtggg 44
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 33 aatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
||||||||||||||||||| | | |||||||||||| ||| |||||||| ||||
Sbjct: 78 aatgaatctagacatatatgtgtgcctagattcattagcatagatatgaatgtggg 23
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 52 atctagctagattcattaacatcaatatgaatatgggaaa 91
||||| ||||||| |||||||||||||| |||||| ||||
Sbjct: 70 atctatctagatttattaacatcaatataaatatgagaaa 109
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 33 aatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
|||||||||| |||||||| | | |||||||||||||||| |||||||| ||||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 78
||||||| ||||||||||||||||||| | |||| | |||||||||| | ||| |||
Sbjct: 50 ttcatatatatgttaatgaatctagacacacatatatgtttagattcattgatatctata 109
Query: 79 tgaatatggg 88
||||| ||||
Sbjct: 110 tgaatgtggg 119
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 37 aatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
|||||||||| || || || ||||||||||||||||| |||||||| ||||
Sbjct: 69 aatctagacacctacatatatctagattcattaacatctatatgaatgtggg 120
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaat 83
|||||||| |||||||||||||| || | |||||||||||||||| | ||||||
Sbjct: 104 atgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaat 49
Score = 46.1 bits (23), Expect = 8e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacatc 74
||||||||||||||| |||||| ||| | ||||||| |||||||||
Sbjct: 59 atgttaatgaatctaaacatatgtatatgtctagatttattaacatc 105
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
||||||| ||| ||||||||||||||||||||||
Sbjct: 93 ttcatatagatgctaatgaatctagacatatatat 59
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 49 tatatctagctagattcattaacatcaatat 79
|||||||| |||||||||||||||||||||
Sbjct: 83 tatatctatatagattcattaacatcaatat 53
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 61 gattcattaacatcaatatgaatatgggaaa 91
||||||||| ||||||||||||| |||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaa 41
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 61 gattcattaacatcaatatgaatatgggaaa 91
||||||||| ||||||||||||| |||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaa 102
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctagacatatatat 53
||||||| |||||||||||||||||||| |||||
Sbjct: 87 ttcatatagatgttaatgaatctagacatctatat 53
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||||||| ||||||||
Sbjct: 63 ctagattcattaacatctatatgaat 88
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 61 gattcattaacatcaatatgaatatgggaaa 91
||||||||| ||||||||||||| |||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaa 15
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 61 gattcattaacatcaatatgaatatgggaaa 91
||||||||| ||||||||||||| |||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaa 76
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 70 acatcaatatgaatatgggaaaa 92
|||||||||||||||||||||||
Sbjct: 86 acatcaatatgaatatgggaaaa 64
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatggg 88
||||||||||||||||| |||||||| ||||
Sbjct: 57 ctagattcattaacatctatatgaatgtggg 87
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 cattaacatcaatatgaatatgggaaa 91
|||| ||||||||||||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaa 106
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaatatcaatatgaat 49
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatggg 88
|||||||||||||||| |||||||| ||||
Sbjct: 64 tagattcattaacatctatatgaatgtggg 93
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgg 87
||||||||||||||||| |||| |||||||
Sbjct: 68 ctagattcattaacatctatataaatatgg 97
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||| ||||||||| |||||| ||||
Sbjct: 74 ctagattcattagcatcaatataaatatgagaaa 41
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaat 83
|||||||||||| |||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaat 49
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||||||| |||||||||||||
Sbjct: 87 ttcatattaatgctaatgaatctaga 62
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||| ||| ||||||||| |||||||
Sbjct: 63 ctagattcattagcattaatatgaatgtgggaaa 96
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatatatatctagctagattcattaacat 73
||||||||||||||| |||||| ||| | |||||||||||||||
Sbjct: 59 atgttaatgaatctaaacatatgtatgtgtttagattcattaacat 104
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 29 tgttaatgaatctagacatata 50
||||||||||||||||||||||
Sbjct: 84 tgttaatgaatctagacatata 63
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatggg 88
|||||||||||||||| |||||||| ||||
Sbjct: 64 tagattcattaacatctatatgaatgtggg 93
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 attcattaacatcaatatgaat 83
||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaat 70
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 62 attcattaacatcaatatgaatatgggaaa 91
|||||| ||||||||||||||| |||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaa 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
||||||| || ||||||||||||||| |||||||
Sbjct: 75 ctagatttatgaacatcaatatgaatgtgggaaa 108
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgg 87
|||||||| |||||||| ||||||||||||
Sbjct: 74 ctagattcgttaacatctatatgaatatgg 45
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 58 ctagattcattaacatcaatatgaatatgggaaa 91
|||||||||||| ||| ||||||||| |||||||
Sbjct: 74 ctagattcattagcattaatatgaatgtgggaaa 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ttcatattaatgttaatgaatctaga 44
|||||||||||| |||||||||||||
Sbjct: 50 ttcatattaatgctaatgaatctaga 75
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatatgaatatggg 88
|||||||||||||||| |||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatggg 88
|||||||||||||||| |||||||| ||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 attcattaacatcaatatgaatatgggaaa 91
|||||||| ||||||||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaa 78
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tagattcattaacatcaatatgaatatggg 88
|||||||||||||||| |||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatggg 88
|||||||||||||||| |||||||| ||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 atgttaatgaatctagacatat 49
||||||||||||||||||||||
Sbjct: 59 atgttaatgaatctagacatat 80
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tagattcattaacatcaatatgaatatggg 88
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Sbjct: 72 tagattcattaacatctatatgaatgtggg 101
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 44.1 bits (22), Expect = 3e-04
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 32 taatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 88
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Sbjct: 98 taatgaatctagccacatatatgt--ccagattcattaacatctatatgaatgtggg 44
