miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||| | ||||||||||||||||||||||| | ||| ||||||||||||||| | |||
Sbjct: 64 aatgactctagatagatatatatgtctagat-tcattagcatcaatatgaatatagaaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||||||||| ||||||||||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggagggag 156
Score = 115 bits (58), Expect = 2e-25
Identities = 128/150 (85%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | |||||| | |||||||||||| |||| ||| ||||
Sbjct: 98 atgaatctagacatatatatctatctaga-gtcattaacatcaatacgaatgtggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 140/153 (91%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| |||||||||| ||||| | ||||||||||||||||||||| ||||
Sbjct: 98 atgaatctagataaatatatatgtatagat-tcattaacatcaatatgaatatggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggag 7
Score = 147 bits (74), Expect = 5e-35
Identities = 132/150 (88%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | |||||| | ||||||| | ||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctatacatatatatttatctagat-tcattaacatcaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 139/153 (90%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | |||||| |||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagat-tcattaacaacaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||||| ||||||||||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggag 156
Score = 133 bits (67), Expect = 8e-31
Identities = 131/151 (86%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| ||| |||| |||||||||||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||| | |||||||||||||| || ||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagat-tcattaacatcaatatggatgtggaaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagg 154
|||||| |||||||| ||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 138/153 (90%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | ||||||||||||||||| ||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagat-tcattaacatcaatatgaatgtgggtaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctataatgacttacattgtgaaacggagggag 7
Score = 139 bits (70), Expect = 1e-32
Identities = 131/150 (87%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | ||||||| ||||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagat-tcattaacattaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| |||||||||||||| |||||||||
Sbjct: 124 gctaaaatgacttatattgtgaaacggagg 153
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 138/153 (90%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | ||||||| ||||||||| ||| |||
Sbjct: 65 atgaatctagatagatatatatgtctagat-tcattaacattaatatgaatgtggagaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggag 156
Score = 123 bits (62), Expect = 8e-28
Identities = 129/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||| |||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | |||||| ||||||||| ||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagat-tcattaacactaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| |||||||| ||||| |||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| |||||||||||||||||||||| || ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||| ||||||| || |||||||||||||||| | ||||||||||||||||| ||| |||
Sbjct: 64 aataaatttagctaaatatatatgtctagat-tcattaacatcaatatgaatgtgggaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||||| ||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggag 156
Score = 129 bits (65), Expect = 1e-29
Identities = 132/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||| || || |||| || ||||||||| ||| ||||
Sbjct: 98 atgaatctagacatatatatttagctaaattta-ttaatataaatatgaatgtggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctataatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 137/153 (89%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| || |||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || |||||||||||||||||||| | ||||||||| ||||||| ||| ||||
Sbjct: 98 atgaatctaaatagatatatatgtctagat-tcattaacatcactatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggag 7
Score = 129 bits (65), Expect = 1e-29
Identities = 132/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | | ||||| | |||| |||||||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagat-tcattaatatcaatatgaatgtggaaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
| ||| |||||||| ||||| ||||||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 167 bits (84), Expect = 6e-41
Identities = 133/150 (88%), Gaps = 7/150 (4%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||| |||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 65 atgagtttagatagatacatatgtctagat-------acatcaatatgaatatggaaaat 117
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagg 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 140/158 (88%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| || | ||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| |||||||| ||||||| | |||| |||||||||||| ||| ||||
Sbjct: 65 atgaatctagataaatatatatatctagat-tcattaatatcaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggaggacat 162
||||| |||||||||||||| |||||||||||| ||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagtacat 161
Score = 131 bits (66), Expect = 3e-30
Identities = 130/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| |||||| | ||||||| | ||||||| ||||||||| ||| |||
Sbjct: 98 atgaatctagatatatatatttatctagat-tcattaacattaatatgaatgtggaaaaa 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
| ||| |||||||||||||| |||||||||
Sbjct: 39 gttagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 134/150 (89%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||||||||||||||||| || | ||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacat-tcattaacatcaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||| |||||||| ||||| |||||||||
Sbjct: 124 attagaatgacttacattgtgaaacggagg 153
Score = 153 bits (77), Expect = 9e-37
Identities = 135/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | ||||||||||||||||| ||| ||||
Sbjct: 98 atgaatgtagacatatatatctatctagat-tcattaacatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 136/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||| ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | |||| |||||||||||| ||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagat-tcattaatatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
| ||| |||||||| ||||| ||||||||||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggag 7
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| || ||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | |||| |||||||||||| || ||||
Sbjct: 65 atgaatctagacatatatatctatctagat-tcattaaaatcaatatgaatgtgaaaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||||| ||||||||||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 136/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | ||| ||||||||| ||| || ||||
Sbjct: 65 atgaatctagatagatatatatgtctagat-tcattatcatcaatataaatgtgaaaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| ||| |||||||||| ||||||||||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagggag 156
Score = 117 bits (59), Expect = 5e-26
Identities = 129/151 (85%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||||||| ||| |||| ||||||||| |||||| ||||||||| |
Sbjct: 159 atactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgat 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||| | ||||||| ||||||||| ||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagat-tcattaacataaatatgaatgtgggaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagg 154
||||| |||||||||||||| |||||||||
Sbjct: 40 tgctacaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 159 bits (80), Expect = 1e-38
Identities = 132/150 (88%), Gaps = 7/150 (4%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||| |||||||||||| |||||||||||| |||||||||||||| ||| ||||
Sbjct: 92 atgagtttagatagatacatatgtctagat-------acatcaatatgaatgtggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 159 bits (80), Expect = 1e-38
Identities = 141/159 (88%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||| ||||||| |||||||| |||||||||| |||||||||||||||||
Sbjct: 4 atacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| ||| | |||||||||||||||| | ||||||||||||||||| ||| |||
Sbjct: 64 aatgaatgtag--acatatatatgtctagat-tcattaacatcaatatgaatgtgggaaa 120
Query: 124 tgctagcatgacttatattgtaaaacggagggaggacat 162
|||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 121 tgctagaatgacttacattgtggaacggagggagtacat 159
Score = 125 bits (63), Expect = 2e-28
Identities = 130/150 (86%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||| ||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| | ||||||||||||| || | ||||||||||||||||| | | ||||
Sbjct: 96 atgaatctag--acatatatatgtctacat-tcattaacatcaatatgaatgtagaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| ||||||||
Sbjct: 39 gctagaatgacttacattgtggaacggagg 10
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 155 bits (78), Expect = 2e-37
Identities = 136/153 (88%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| |||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|| ||| || |||||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 98 ataaatctatatagatatatatgtctagattca-ttaacatcaatatgaatatgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||| | |||||||| ||||| ||||||||||||
Sbjct: 39 gcttgaatgacttacattgtgaaacggagggag 7
Score = 123 bits (62), Expect = 8e-28
Identities = 132/153 (86%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | | ||||| || ||||||||||||| ||| || ||||
Sbjct: 65 atgaatctagacatatatatctatatagattta-ttaacatcaatataaatgtg--aaat 121
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 122 gctagaatgacttacattgtgaaacggagggag 154
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 155 bits (78), Expect = 2e-37
Identities = 136/153 (88%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|| ||| || |||||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 63 ataaatctatatagatatatatgtctagattca-ttaacatcaatatgaatatgggaaat 121
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||| | |||||||| ||||| ||||||||||||
Sbjct: 122 gcttgaatgacttacattgtgaaacggagggag 154
Score = 123 bits (62), Expect = 8e-28
Identities = 132/153 (86%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | | ||||| || ||||||||||||| ||| || ||||
Sbjct: 96 atgaatctagacatatatatctatatagattta-ttaacatcaatataaatgtg--aaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 153 bits (77), Expect = 9e-37
Identities = 136/153 (88%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| | ||| |||||| ||||| | ||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctag-cacatacatatgtttagat-tcattaacatcaatatgaatgtgggaaat 122
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 123 gctagaatgacttacattgtgaaacggagggag 155
Score = 131 bits (66), Expect = 3e-30
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | || ||| || |||||| | ||||||||||||||||| ||| ||||
Sbjct: 97 atgaatctaaacatatgtatgtg-ctagat-tcattaacatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 135/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||| ||||||| | ||| ||||||||| ||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatttctagat-tcattaccatcaatattaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||| |||||||| ||||| ||||||||||||
Sbjct: 124 tctaaaatgacttagattgtgaaacggagggag 156
Score = 123 bits (62), Expect = 8e-28
Identities = 129/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | ||||| ||||||||||| ||| ||||
Sbjct: 98 atgaatctagaaatatatatctatctagat-tcattaacgtcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 135/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| | | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||||||||| ||||||| || | ||||||||||||||||| || | ||
Sbjct: 65 atgaatctagatagatatagatgtctatat-tcattaacatcaatatgaatgcggaatat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggag 156
Score = 141 bits (71), Expect = 3e-33
Identities = 132/151 (87%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| |||||| |||| ||||||||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | ||||| | ||||||| | ||||||||||||||||||| | |||
Sbjct: 99 aatgaatatagacatctatatctatctagat-tcattaacatcaatatgaatataggaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagg 154
|||||| |||||||| ||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 135/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagat-tcattagcatcaatatgaatgtggtaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
| ||| |||||||| ||||| ||||||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggag 156
Score = 123 bits (62), Expect = 8e-28
Identities = 129/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| || ||||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | ||| |||||||||||| || ||||
Sbjct: 98 atgaatctagacatatatatctatctagat-tcattagtatcaatatgaatgtgagaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||||||||| |||||||||
Sbjct: 39 gctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 132/150 (88%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||| |||||||| |||||||| |||||||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | ||||||||||||| ||| ||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagat-tcattaacatcaatataaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|| | |||||||| ||||| |||||||||
Sbjct: 39 gcaaaaatgacttacattgtgaaacggagg 10
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | |||| |||||||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagat-tcattaatatcaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| | ||||||||||
Sbjct: 124 gctagaatgacttacattgtgatacggagggag 156
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| ||||||||||||||||||||||| | |||| |||||||||||| ||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagat-tcattaatatcaatatgaatgtgggaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|| ||| |||||||| ||||| ||||||||||||
Sbjct: 40 tgatagaatgacttacattgtgaaacggagggag 7
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/150 (84%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| || ||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | ||||||| | ||||| |||||||| || ||||
Sbjct: 65 atgaatctagacatatatatctatctagat-tcattaactaatatatgaatgtgagaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagat-tcattaccatcaatatgaatgtgggaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|| | | |||||||| ||| | ||||||| ||||
Sbjct: 123 tggtggaatgacttacattatgaaacggaaggag 156
Score = 115 bits (58), Expect = 2e-25
Identities = 125/146 (85%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 12 tccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaatt 71
||||||||| |||| |||||||| | ||||| ||||||||||||||||| ||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 72 tagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagca 131
|||| | |||||| | ||||||| | |||||| |||||||||| ||| ||||||||| |
Sbjct: 91 tagacatatatatctatctagattca-ttaacaacaatatgaatgtgggaaatgctagaa 33
Query: 132 tgacttatattgtaaaacggagggag 157
||||||| ||||| ||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 129/146 (88%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaatt 71
|||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 72 tagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagca 131
||||||||||||||||||||||| | |||| ||||| |||||| | | ||||||||| |
Sbjct: 72 tagatagatatatatgtctagat-tcattaatatcaacatgaatttagaaaatgctagaa 130
Query: 132 tgacttatattgtaaaacggagggag 157
||||||| ||||| ||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
Score = 115 bits (58), Expect = 2e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| |||||||||| | |||||| ||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||| | ||||||||||||||||| || |||
Sbjct: 99 aatgaatctagacatatatatctatctagat-tcattaacatcaatatgaatgtgagaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|| ||| |||||||| ||||| ||||||| ||||
Sbjct: 40 tggtagaatgacttacattgtgaaacggaaggag 7
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||| |||| | |||||||| ||| |||||||| ||||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||||||||||||||||||||| ||||| | ||| |||||||||||||||| ||||
Sbjct: 65 atgaatttagatagatatatatgtttagat-tcattagcatcaatatgaatatgagaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
| ||| |||||||||||||| |||||||||||
Sbjct: 124 gttagaatgacttatattgtggaacggagggag 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 123/150 (82%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||| |||||| |||||||| || ||||| || ||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | |||||| | |||| || | ||| ||||||||||||||||| ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattca-ttagcatcaatatgaatatggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| |||||||||| ||| ||||||||
Sbjct: 39 actagaatgacttatactgtggaacggagg 10
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||| |||||| |||||||| ||||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || |||||||||||||||||||| | |||||| |||||| ||| ||| ||||
Sbjct: 98 atgaatctaaatagatatatatgtctagat-tcattaacaccaatataaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggag 7
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| | | ||||| | |||| |||||||||||| || ||||
Sbjct: 65 atgaatctagacatatatatctatttagat-tcattaatatcaatatgaatgtgaaaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||||||||| |||||||||||
Sbjct: 124 gctagaatgacttatattgtggaacggagggag 156
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| ||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| | ||||||||||||||||| | ||||||| ||||||||| || ||||
Sbjct: 65 atgaatctagttggatatatatgtctagat-tcattaacattaatatgaatgtgagaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggag 156
Score = 115 bits (58), Expect = 2e-25
Identities = 128/150 (85%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| |||||| | |||||||| |||||||||||| |||
Sbjct: 98 atgaatctagacatatatatccaactagat-tcattaacatccatatgaatatgggtaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| | |||||| ||||||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| | ||||||| |||||||| | ||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctaggcatatatataagtctagat-tcattaacatcaatatgaatgtggaaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggag 156
Score = 131 bits (66), Expect = 3e-30
Identities = 130/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| ||||||||| |||||| | ||| |||| |||||||| ||| |||
Sbjct: 98 atgaatctagacttatatatatgcctagat-tcattagcatctatatgaatgtggacaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| ||||| || ||||| |||||||||
Sbjct: 39 gctagaatgacatacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||||| |||||||||||||| | | ||||||||||| ||| ||| ||||
Sbjct: 98 atgaatctagatagaaatatatgtctagat-tcataaacatcaatataaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|| | |||||||| |||| ||||||||||||
Sbjct: 39 gcaaaaatgacttactttgtgaaacggagggag 7
Score = 101 bits (51), Expect = 3e-21
Identities = 127/151 (84%), Gaps = 1/151 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||| | |||||||||| |||||| ||||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
|||||| |||| | |||| | | ||||||| | ||||||||||||| ||| ||| |||
Sbjct: 64 tatgaatctagacatatatttctatctagat-tcattaacatcaatataaatgtgggaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagg 154
||||| |||||||| |||| |||||||||
Sbjct: 123 tgctaaaatgacttactttgtgaaacggagg 153
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 143 bits (72), Expect = 8e-34
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 agatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
|||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 2 agatacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatg 61
Query: 62 ttaatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggca 121
|||||||| |||||||| |||||| ||||||| | ||||||| ||||| ||||||| |
Sbjct: 62 gtaatgaatctagataga-atatatatctagat-tcattaacattaatataaatatggga 119
Query: 122 aatgctagcatgacttatattgtaaaacggagggag 157
|||| ||| |||||||| ||||| ||||||||||||
Sbjct: 120 aatgttagaatgacttacattgtgaaacggagggag 155
Score = 91.7 bits (46), Expect = 3e-18
Identities = 126/150 (84%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| || ||||| ||| ||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| |||| | | ||||||| | ||| ||||||||||||| || ||||
Sbjct: 97 atgaatctagatatatat-tctatctagat-tcattaccatcaatatgaatgtgagaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| |||| |||||||||
Sbjct: 39 gctagaatgacttacattgcgaaacggagg 10
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 143 bits (72), Expect = 8e-34
Identities = 137/157 (87%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat----tgat 60
||||||||||||||||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 61 gttaatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggc 120
|||||||||| ||||||||||||||||||||||| | ||||||||| ||||||| |||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagat-tcattaacatcactatgaatgtggg 123
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||||||| ||||| ||||||||||||
Sbjct: 124 aaatgctagaatgacttacattgtgaaacggagggag 160
Score = 113 bits (57), Expect = 8e-25
Identities = 131/154 (85%), Gaps = 5/154 (3%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatca----atatgaatatggc 120
|||||| |||| | |||||| | ||||||| | ||||||||| ||||||||||
Sbjct: 102 atgaatctagacatatatatctatctagat-tcattaacatcactatgtatgaatatgcg 44
Query: 121 aaatgctagcatgacttatattgtaaaacggagg 154
||||||||| |||||||| ||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| |||||||||||||| | ||| ||||||||||||| | | ||||
Sbjct: 65 atgaatctag------atatatgtctagat-tcattagcatcaatatgaatgtaggaaat 117
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||||||||| ||||||||||||
Sbjct: 118 gctagaatgacttatattgtgaaacggagggag 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/150 (83%), Gaps = 7/150 (4%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||| | ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| | |||| ||||||| | ||| ||||||||||||| ||| ||||
Sbjct: 92 atgaatctag------acatatatctagat-tcattagcatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 135 bits (68), Expect = 2e-31
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 agatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||||| ||||||||| |||||| |||| ||| ||| ||| ||||||||||||||||
Sbjct: 2 agatactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgata 60
Query: 62 ttaatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggca 121
||||||||| ||||||||||||||||||||||| | ||||||||||||||||| ||| |
Sbjct: 61 ttaatgaatctagatagatatatatgtctagat-tcattaacatcaatatgaatgtggaa 119
Query: 122 aatgctagcatgacttatattgtaaaacggagggag 157
||| ||| |||||||| ||||| ||||||||||||
Sbjct: 120 aatattagaatgacttacattgtgaaacggagggag 155
Score = 123 bits (62), Expect = 8e-28
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 158 atactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||| | |||| |||||||||||| ||| |||
Sbjct: 98 aatgaatctagacatatatatctatctagat-tcattaatatcaatatgaatgtgggaaa 40
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||| || ||||| ||||||||||||||||||
Sbjct: 39 -actagaataacttacattgtaaaacggagggag 7
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 133 bits (67), Expect = 8e-31
Identities = 101/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttagatagatatatat 86
|||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 87 gtctagatatacttaacatcaatatgaatatggcaaatgctagcatgactt 137
|||||||| | ||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 61 gtctagat-tcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 101 bits (51), Expect = 3e-21
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttagatagatatatat 86
|||||||| |||||||| |||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 87 gtctagatatacttaacatcaatatgaatatggcaaatgctagcatgactt 137
||||||| | ||||||||||||||||| || ||||||||| |||||||
Sbjct: 50 atctagat-tcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 131/150 (87%), Gaps = 3/150 (2%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||| ||||||| |||| | ||||||||||||| || ||| ||||
Sbjct: 65 atgaatctagatag--gcatatgtccagat-tcattaacatcaatataaacgtgggaaat 121
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||||||||| |||||||||
Sbjct: 122 gctagaatgacttatattgtgaaacggagg 151
Score = 109 bits (55), Expect = 1e-23
Identities = 131/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||||||| |||||||| |||||||| |||| || |||||||||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| | | | |||| | ||||||| | ||||||||||||||||| ||| |||
Sbjct: 97 aatgaatctgg--acatatgcctatctagat-tcattaacatcaatatgaatgtgggaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||||| ||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 133 bits (67), Expect = 8e-31
Identities = 101/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttagatagatatatat 86
|||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 87 gtctagatatacttaacatcaatatgaatatggcaaatgctagcatgactt 137
|||||||| | ||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 50 gtctagat-tcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 101 bits (51), Expect = 3e-21
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttagatagatatatat 86
|||||||| |||||||| |||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 87 gtctagatatacttaacatcaatatgaatatggcaaatgctagcatgactt 137
| ||||| | ||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 61 atttagat-tcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| ||||||||||| | || ||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| ||||||||||||||||| | ||| |||||||||| || || |||
Sbjct: 64 aatgaatctagacggatatatatgtctagat-tcattagcatcaatatggatgtgagaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 123 tgctaaaatgacttacattgtgaaacggagggag 156
Score = 115 bits (58), Expect = 2e-25
Identities = 128/150 (85%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| |||||||| | |||| || | ||||||| ||| ||||
Sbjct: 98 atgaatctagacatatatatccgtctagat-tcattaatataagtatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| ||||||| |||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
||||||||||||| | || | ||||||||| | |||||||| |||||||||||| |||
Sbjct: 65 atgaatttagatatagatgtgtgtctagat-tcattaacatctatatgaatatgggtaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggag 156
Score = 77.8 bits (39), Expect = 4e-14
Identities = 124/151 (82%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| |||||||| ||||||| ||| |||||||| ||||||
Sbjct: 159 atactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | | || ||| |||| || | |||||||| ||||| || ||| ||
Sbjct: 99 aatgaatctagacacacatctatatctaaat-tcattaacatctatatgtatgtgggcaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagg 154
|||||| |||||||| ||| | |||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 130/150 (86%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||||| |||||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||| ||||||||||||| || | ||||||| | ||||||| ||| ||||
Sbjct: 96 atgaatctagat--atatatatgtctaaat-tcattaacatgagtatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|| || |||||||||||||| |||||||||
Sbjct: 39 gccagaatgacttatattgtgaaacggagg 10
Score = 117 bits (59), Expect = 5e-26
Identities = 132/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||||||| |||||||| | |||||| ||||||||||| | |||||
Sbjct: 4 atacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||||||| | |||||||| ||||||| | ||||||| | ||||||| || |||
Sbjct: 64 aatgaatttag--acatatatatatctagat-tcattaacatgagtatgaatgtgaaaaa 120
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||||| ||||||||||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggagggag 154
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 3 gatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 160 gatactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgc 101
Query: 63 taatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaa 122
||||||||||| | | |||||| || ||||| | ||| |||| |||||||||| | ||
Sbjct: 100 taatgaatttaaacatatatatgcgtatagat-tcattagcatctatatgaatatagaaa 42
Query: 123 atgctagcatgacttatattgtaaaacggagggag 157
||| ||| |||||||| ||||| ||||||||||||
Sbjct: 41 atgttagaatgacttacattgtgaaacggagggag 7
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| || ||||||| | |||||||| |||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| || | |||||||||| || || | ||| |||| |||||||| ||| |||
Sbjct: 64 aatgaatctatacgcatatatatgtttaaat-tcattagcatctatatgaatgtggaaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||||| ||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 123 bits (62), Expect = 8e-28
Identities = 128/150 (85%), Gaps = 10/150 (6%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| |||||||||| | ||||||||||||||||| ||| ||||
Sbjct: 89 atgaatctaga---------atgtctagat-tcattaacatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
Score = 121 bits (61), Expect = 3e-27
Identities = 130/153 (84%), Gaps = 10/153 (6%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | ||||||| | ||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctagaca---------ttctagat-tcattaacatcaatatgaatgtgggaaat 114
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 115 gctagaatgacttacattgtgaaacggagggag 147
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||| |||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | |||| |||||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagat-tcattaatatcaatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| ||| |||| ||||| ||||||||||||
Sbjct: 124 actagaatgtcttacattgtgaaacggagggag 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| ||| |||| ||| |||| |||||||||||||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||| | ||||||||||||| || | |||
Sbjct: 99 aatgaatctagacatatatatctatctagat-tcattaacatcaatatttctagtgaaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
| |||| |||||||| ||||| ||||||||||||
Sbjct: 40 tactagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 134/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 1 aagatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||||||| |||||||||||||||| |||||||| |||||||| |||||||||||| |||
Sbjct: 162 aagatactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagat 103
Query: 61 gttaatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggc 120
||| |||||| || ||| ||||| |||||||||| | |||||||| |||||||| ||
Sbjct: 102 gttgatgaatctaaatatatatagatgtctagat-tcattaacatctatatgaatgtgag 44
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||| || |||||||| | ||| ||||||||||||
Sbjct: 43 aaatgataaaatgacttacaatgtgaaacggagggag 7
Score = 113 bits (57), Expect = 8e-25
Identities = 130/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | ||||||| | ||||| | | |||||| |||||||| ||| ||||
Sbjct: 65 atgaatctagacatctatatatatttagat-tcatcaacatctatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 119 bits (60), Expect = 1e-26
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 65 atgaatttagatagatatatatgt 88
|||||| |||||||||||| ||||
Sbjct: 70 atgaatctagatagatataaatgt 47
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||| ||||||||| |||||| |||||||||||| |||| ||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 117 bits (59), Expect = 5e-26
Identities = 132/153 (86%), Gaps = 10/153 (6%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||| ||||||||||| ||||| || |||||||| ||||||| |||||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgtta 57
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||| |||||||| | ||||||||||||||||||||| ||||
Sbjct: 58 atgaatctagatagatatat--gtctagattca-ttaacatcaatatgaatatgggaaat 114
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||||||||| ||||||||||||
Sbjct: 115 gctaaaatgacttatattgtgaaacggagggag 147
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 89 atgaatctaga 79
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 115 bits (58), Expect = 2e-25
Identities = 130/153 (84%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||||||| |||||| ||||||| | ||| ||||||||| ||| ||| ||||
Sbjct: 65 atgaatttag------atatatctctagat-tcattagcatcaatataaatgtggaaaat 117
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||||||||| ||||||||||||
Sbjct: 118 gctaaaatgacttatattgtgaaacggagggag 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 93 aatgaatctaga 82
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 125/146 (85%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaatt 71
|||||| || |||| |||||||| || ||||| |||||||||||| | |||||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 72 tagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagca 131
|||||| ||||| |||||||||| | |||||| | |||||||| ||| ||||||||| |
Sbjct: 72 tagatatatatagatgtctagat-tcattaacacctatatgaatgtggaaaatgctagaa 130
Query: 132 tgacttatattgtaaaacggagggag 157
||||||| ||||| ||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
Score = 107 bits (54), Expect = 5e-23
Identities = 115/134 (85%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| ||||||||||||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | ||||||| ||||||| | |||||| | |||||||| ||| ||||
Sbjct: 98 atgaatctagacatctatatatatctagat-tcattaacacctatatgaatgtgggaaat 40
Query: 125 gctagcatgactta 138
| ||| ||||||||
Sbjct: 39 gttagaatgactta 26
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 65 atgaat 70
||||||
Sbjct: 74 atgaat 69
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| |||||||| |||||||| ||||| |||||||||
Sbjct: 74 ttaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||| ||| |||||| | |||||||| ||||| ||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggag 7
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 130/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| |||||||| | | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
||||| || |||||||||||||||||||| || |||| || |||||||| ||| ||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcac-taacctccatatgaatgtgggaaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggag 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 124/148 (83%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
||||||||||| |||| |||||||| |||||||| |||||||||||| || |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 70 tttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctag 129
| |||| | |||||| | | ||||| || |||| || |||||||||| | |||||||||
Sbjct: 93 tctagacatatatatctatatagattcac-taacctctatatgaatataggaaatgctag 35
Query: 130 catgacttatattgtaaaacggagggag 157
|||||||| ||| | ||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 113 bits (57), Expect = 8e-25
Identities = 129/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 147 atacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
|||| ||| ||| |||||||| | ||||||||||||||||| ||| |||
Sbjct: 87 aatg------------tatctatatctagataca-ttaacatcaatatgaatgtggaaaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||||| ||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggag 7
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 64 aatgaatttagata 77
|||| || ||||||
Sbjct: 64 aatgtatctagata 77
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 130/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| || ||| | ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||||||||||||||||||||||| | || |||| |||||||| ||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagat-tcattggcatcgatatgaatgtggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 64 aatgaatttagatagatatatatgtctagat 94
||||||| |||| | |||||| | |||||||
Sbjct: 64 aatgaatctagacatatatatctatctagat 94
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 130/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| ||| ||||| ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| |||||||||||||||| | || |||| |||||||| ||| ||||
Sbjct: 98 atgaatctagataaatatatatgtctagat-tcattggcatcgatatgaatgtggaaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||| | ||| |||| ||||| || || |||
Sbjct: 64 aatgaatctagacatatatatttatctagat-tcattagcatcgatatggatgtgaaaaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
| |||| |||||||| ||| | ||||||||||||
Sbjct: 123 tactagaatgacttacattatgaaacggagggag 156
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 65 atgaattta 73
|| ||||||
Sbjct: 65 ataaattta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| |||| ||| |||||||| ||||| |||||||||
Sbjct: 65 ttaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 130/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| ||||| | ||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| || | ||||||||||| | |||||||| |||||||||| | |||
Sbjct: 98 atgaatctagatatatgtctatgtctagat-tcattaacatctatatgaatataggcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 122/150 (81%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| ||||||| | | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | | | |||| ||||||| | |||||||| |||||||| || | |
Sbjct: 65 atgaatctagacatagacatatatctagat-tcattaacatccatatgaatgtgagcatt 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||| | |||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 65 atga 68
||||
Sbjct: 65 atga 68
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| ||| |||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 100 taacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||||| ||| |||||||| || | ||| ||||| ||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggag 126
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| || ||||||||| |||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtt 63
Query: 64 aatgaatttagatag 78
||||||| |||||||
Sbjct: 64 aatgaatgtagatag 78
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||||||| ||||| ||| |||||||| ||||| |||||||||
Sbjct: 65 ttaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
|||| ||||||||||| |||| |||||||||||| ||||| || |||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||||| |||| ||| |||||||| ||| | ||||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggag 134
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 128/150 (85%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| | || |||||||||||| ||| | |||||||| | |||||| ||| ||||
Sbjct: 96 atgaatct--atgcatatatatgtcttgat-tcattaacatctacatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| |||||||| ||||| |||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggagg 10
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 82 tatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatat 141
||||||||||||| | ||||||||||||||||| ||| ||||||||| |||||||| ||
Sbjct: 81 tatatgtctagattca-ttaacatcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 142 tgtaaaacggagg 154
||| |||||||||
Sbjct: 22 tgtgaaacggagg 10
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 65 atgaatt 71
|||||||
Sbjct: 65 atgaatt 71
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 65 ttaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 10
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||||||||| |||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggag 153
|||||||||||||||||| ||||||||| |||||||| ||| | ||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtc 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| ||| | || ||||||||| | || |||||||||||||| ||| |||
Sbjct: 64 aatgaatctag------acatctgtctagat-tcattgacatcaatatgaatgtgggaaa 116
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||| | ||||||||||||
Sbjct: 117 tgctagaatgacttacattatgaaacggagggag 150
Score = 101 bits (51), Expect = 3e-21
Identities = 126/150 (84%), Gaps = 7/150 (4%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| |||||||| |||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| || |||||||||| | || |||||||||||||| ||| ||||
Sbjct: 92 atgaatctagacag------atgtctagat-tcattgacatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
| ||| |||||||| ||||| |||||||||
Sbjct: 39 gatagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacatt 51
|||||||||||||||| ||||||||||||| || ||||| |||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| || ||||| |||||||| |||||||||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 65 atgaat 70
||||||
Sbjct: 81 atgaat 76
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 65 ttaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggagg 158
||||||||||||||||| || ||||||||| |||| ||| ||||| ||||||||||||
Sbjct: 81 ttaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacggagggagt 140
Query: 159 acat 162
||||
Sbjct: 141 acat 144
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| ||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 65 atgaa 69
|||||
Sbjct: 89 atgaa 85
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| ||||||||| |||||||| ||| | |||||||||
Sbjct: 65 ttaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcat-tttagcattttccacattcatattgatgtt 63
|||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 64 aatg 67
||||
Sbjct: 83 aatg 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| ||| |||||||| |||||||| ||||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 65 atgaa 69
|||||
Sbjct: 86 atgaa 82
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 65 atgaat 70
||||||
Sbjct: 83 atgaat 78
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcat-tttagcattttccacattcatattgatgtt 63
|||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 64 aatg 67
||||
Sbjct: 65 aatg 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| ||| |||||||| |||||||| ||||| |||||||||
Sbjct: 87 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 138
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 65 atgaat 70
||||||
Sbjct: 70 atgaat 65
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||| |||||||||||||||| |||||||||| | |||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| |||| ||| |||||||||||||| |||||||||
Sbjct: 70 ttaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggagg 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||| ||| |||| | | |||||||| ||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| || ||||| ||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 65 atgaatttagatagatat 82
|||||| |||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| ||| ||||| ||| |||||||| ||||| ||||||||||||
Sbjct: 76 ttaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagggag 134
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 127/153 (83%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat---- 60
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||||| || | ||||||| || ||||||||||||| |||||| ||||
Sbjct: 61 ---------gatagatagatctatctagattta-ttaacatcaatataaatatgagaaat 110
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||||| ||||||||||||
Sbjct: 111 gctagaatgacttacattgtgaaacggagggag 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 65 atgaatttagatagat 80
|| ||| |||||||||
Sbjct: 85 ataaatctagatagat 70
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 129/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| ||||||| |||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
||||||||||||| | || | ||||||||| | |||||||| |||||||| | | |||
Sbjct: 98 atgaatttagatatagatgtgtgtctagat-tcattaacatctatatgaatgttggtaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| ||||||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 129/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| ||||| | ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| || | ||| ||||||| | |||||||| |||||||||| | |||
Sbjct: 65 atgaatctagatatatgtctatatctagattca-ttaacatctatatgaatataggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggag 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 123/150 (82%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| ||||||| | | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| | | |||| ||||||| | |||||||| |||||||| || | |
Sbjct: 98 atgaatctagatatagacatatatctagat-tcattaacatccatatgaatgtgagcatt 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||| | |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| ||||||||| ||||||| ||||| |||||||||
Sbjct: 65 ttaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 65 atga 68
||||
Sbjct: 65 atga 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||| |||| ||||||||||| |||||||| ||||| || ||||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| || |||||| |||||||| ||||| |||| |||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggag 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| || ||||| |||||||| ||| | |||||||||
Sbjct: 65 ttaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtc 63
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||| ||||||||||| |||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||| ||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 101 aacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||| ||| ||||||||| |||||||| ||| | ||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggag 133
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 103 bits (52), Expect = 7e-22
Identities = 127/154 (82%), Gaps = 11/154 (7%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| ||||||| ||||| |||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | |||||| | ||||||||||||||||| ||| |||
Sbjct: 64 aatgaatctagacatatatat-----------tcattaacatcaatatgaatgtgggaaa 112
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
|||||| |||||||| ||||| |||||| |||||
Sbjct: 113 tgctagaatgacttacattgtgaaacggggggag 146
Score = 101 bits (51), Expect = 3e-21
Identities = 119/142 (83%), Gaps = 11/142 (7%)
Strand = Plus / Minus
Query: 13 ccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaattt 72
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga---- 85
Query: 73 agatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcat 132
|||||||||||||||| | ||||||| ||||| ||| ||| ||||||||| ||
Sbjct: 84 ------atatatatgtctagat-tcattaacattaatataaatgtgggaaatgctagaat 32
Query: 133 gacttatattgtaaaacggagg 154
|||||| ||||| |||||||||
Sbjct: 31 gacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 64 aatgaatttaga 75
||| ||| ||||
Sbjct: 77 aataaatctaga 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 80 tatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttat 139
|||| |||||||||| || ||||||||||||||||||||| |||||||| |||||||
Sbjct: 58 tataaatgtctagattta-ttaacatcaatatgaatatgggaaatgctaaaatgacttgc 116
Query: 140 attgtaaaacggagg 154
||||| |||||||||
Sbjct: 117 attgtgaaacggagg 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattca 53
||||||||||||||||||||| |||| ||| ||| |||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 85 atgaatctaga 75
Score = 87.7 bits (44), Expect = 4e-17
Identities = 124/152 (81%), Gaps = 14/152 (9%)
Strand = Plus / Plus
Query: 6 acttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaa 65
||||||||||||||| |||| |||||||| |||||||| |||||| |||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 66 tgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatg 125
| ||| ||| ||||||| | ||||||||||||||||||||| |||||
Sbjct: 66 taaatctag-------------tctagattca-ttaacatcaatatgaatatggaaaatg 111
Query: 126 ctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||||| ||||||||||||
Sbjct: 112 ctagaatgacttacattgtgaaacggagggag 143
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 80 tatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttat 139
||||||||||||||| | ||||||||||||||||| ||| ||||||||| ||||||||
Sbjct: 83 tatatatgtctagattca-ttaacatcaatatgaatgtgggaaatgctagaatgacttac 25
Query: 140 attgtaaaacggagg 154
||||| |||||||||
Sbjct: 24 attgtgaaacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcattttgtacatacatattgatgt 83
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 101 bits (51), Expect = 3e-21
Identities = 129/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| ||| |||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||||||||| |||||||| | || ||||||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatata---gtctagatcca-ttggcatcaatatgaatgtgggaaat 120
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
| | | |||||||| ||| | ||||||||||||
Sbjct: 121 ggtggaatgacttacattatgaaacggagggag 153
Score = 71.9 bits (36), Expect = 3e-12
Identities = 123/150 (82%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| | ||||| ||||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
||| || |||| ||||| | ||||||| | ||| |||||||||||| ||| ||||
Sbjct: 95 atggatctagac---tatatctatctagattca-ttagtatcaatatgaatgtgggaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| |||||||||||||| |||||||||
Sbjct: 39 actagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||||| || |||||||||||| ||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 65 atgaatttagatagatatatatg 87
|||||| ||||| |||||||||
Sbjct: 74 atgaatctagatgaatatatatg 52
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||| ||||||||||| |||| |||||||| || ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||| ||||||||||||| ||||||||| | |||||| ||||| |||||||||
Sbjct: 74 ttaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacggagg 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| ||| ||||| ||| |||||||| ||| | ||||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 65 atgaat 70
||||||
Sbjct: 80 atgaat 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 65 at 66
||
Sbjct: 65 at 66
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggagg 158
||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 80 ttaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagggagt 139
Query: 159 acat 162
||||
Sbjct: 140 acat 143
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||| | |||||||| |||||||| ||||||||||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 65 at 66
||
Sbjct: 77 at 76
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggagg 158
||||||||||||||||| ||| ||||||||| |||||||| |||| ||||||||||||
Sbjct: 77 ttaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggagt 136
Query: 159 acat 162
||||
Sbjct: 137 acat 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| ||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| ||| | |||||| ||| ||||||||||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | || ||||| ||||| | | |||||||| |||||||||||| ||
Sbjct: 99 aatgaatctagacatatgtatatatctaggt-tcattaacatctatatgaatatgggcaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
| |||| | | |||||||| | ||||||||||||
Sbjct: 40 tactagaaagtcttatattatgaaacggagggag 7
Score = 58.0 bits (29), Expect = 4e-08
Identities = 90/109 (82%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatttagatagatatatatgtctagatatacttaacatcaa 108
|||||||| |||||||||||| |||||| ||| |||||||||||| | |||||||| |
Sbjct: 49 attcatatagatgttaatgaacctagatatatacatatgtctagat-tcattaacatcta 107
Query: 109 tatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||| ||| ||| ||| | | |||| ||||| ||||||||||||
Sbjct: 108 tatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 65 atgaatttagatagatat 82
|| |||||||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 65 atgaat 70
||||||
Sbjct: 54 atgaat 49
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcat 54
|||| |||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| | | ||||||||| |||||||| ||||| |||||||||
Sbjct: 54 ttaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggagg 109
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 110 atgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||| ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 64 aatgaatttagata 77
||||||| ||||||
Sbjct: 56 aatgaatctagata 43
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||| |||||||||||| ||| ||||||||| |||||||| ||| | |||||||||
Sbjct: 55 ttaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagg 110
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcat 41
|||| |||||||||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 123 atgctagcatgacttatattgtaaaacggagggag 157
||||||| |||||||| ||||| ||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| ||||||||| ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 65 atgaatttagatagatat 82
|||||| |||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||| ||||||||| |||||| |||||||| ||| |||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggaggacat 162
|||||||| || |||| |||| |||||||| ||||| |||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagtacat 2
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| ||| | |||||| ||| ||||||||||||| ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| |||| | || ||||| ||||| | | |||||||| |||||||||||| ||
Sbjct: 64 aatgaatctagacatatgtatatatctaggt-tcattaacatctatatgaatatgggcaa 122
Query: 124 tgctagcatgacttatattgtaaaacggagggag 157
| |||| | | |||||||| | ||||||||||||
Sbjct: 123 tactagaaagtcttatattatgaaacggagggag 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 90/109 (82%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatttagatagatatatatgtctagatatacttaacatcaa 108
|||||||| |||||||||||| |||||| ||| |||||||||||| | |||||||| |
Sbjct: 114 attcatatagatgttaatgaacctagatatatacatatgtctagat-tcattaacatcta 56
Query: 109 tatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||| ||| ||| ||| | | |||| ||||| ||||||||||||
Sbjct: 55 tatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/158 (82%), Gaps = 14/158 (8%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||| |||||| |||||||| |||||||| |||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata--------- 95
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|| ||||||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 94 ----atctagatagatatatatgtctagattca-ttaacatcaatatgaatatgagaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggaggacat 162
||||| |||||||| ||| | |||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagtacat 2
Score = 83.8 bits (42), Expect = 7e-16
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| |||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| |||| | |||||| | |||||||
Sbjct: 65 atgaatctagacatatatatctatctagat 94
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 65 atgaatttagatag 78
|||||| |||||||
Sbjct: 67 atgaatctagatag 54
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| || ||||||||| |||||||||||||| |||||||||
Sbjct: 67 ttaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggagg 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattt 43
||||||||||||||||||||| |||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||| |||| || |||||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 65 atgaatttagatagatat 82
|||||| |||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggag 7
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||| ||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 4 atacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 63
Query: 64 aatgaatttagat 76
||||||| |||||
Sbjct: 64 aatgaatctagat 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| |||||||||||| ||| |||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatt 88
Query: 64 aatgaat 70
|||||||
Sbjct: 87 aatgaat 81
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/150 (82%), Gaps = 13/150 (8%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| ||||||| | ||||||||||||||||||| | ||||
Sbjct: 65 atgaatctaga------------tctagat-tcattaacatcaatatgaatatagtaaat 111
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||||||||| ||||||||
Sbjct: 112 gctagaatgacttatattgtggaacggagg 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||| |||||| |||||||| |||||||| | | ||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 65 atgaatttagat 76
|||||| |||||
Sbjct: 86 atgaatctagat 75
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 123/147 (83%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
|||||||||||||||| |||||||| |||||| | |||||||||||||| | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 70 tttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctag 129
| |||| | | |||||||||||||| | || |||||||||||||| || |||||||||
Sbjct: 70 tctagacatacatatatgtctagattca-ttgacatcaatatgaatgtgagaaatgctag 128
Query: 130 catgacttatattgtaaaacggaggga 156
|||||||| ||||| |||||||||||
Sbjct: 129 aatgacttacattgtgaaacggaggga 155
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
|||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 70 tttagatagatatatatgtctagat 94
| |||| | |||| |||||||||||
Sbjct: 93 tctagacatatatgtatgtctagat 69
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 4 atacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 63
Query: 64 aatgaatttagat 76
||||||| |||||
Sbjct: 64 aatgaatctagat 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| |||||||||||| ||| |||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatt 88
Query: 64 aatgaat 70
|||||||
Sbjct: 87 aatgaat 81
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/150 (82%), Gaps = 13/150 (8%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| ||||||| | ||||||||||||||||||| | ||||
Sbjct: 86 atgaatctaga------------tctagat-tcattaacatcaatatgaatatagtaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||||||||| ||||||||
Sbjct: 39 gctagaatgacttatattgtggaacggagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||| |||||| |||||||| |||||||| | | ||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 65 atgaatttagat 76
|||||| |||||
Sbjct: 65 atgaatctagat 76
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| |||| |||||||| |||||||| ||| |||||||||||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 64 aatgaatttagat 76
||||||| |||||
Sbjct: 81 aatgaatctagat 69
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 65 atgaatttagat 76
|||||| |||||
Sbjct: 65 atgaatctagat 76
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||||||| ||||||||| |||||||| ||| | |||||||||
Sbjct: 80 ttaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacggagg 135
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 64 aatga 68
|||||
Sbjct: 71 aatga 67
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 65 a 65
|
Sbjct: 65 a 65
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggagg 158
|||||||| |||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 159 acat 162
||||
Sbjct: 5 acat 2
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 65 atgaatttagata 77
|||||| ||||||
Sbjct: 65 atgaatctagata 77
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||||| | ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||||||| |||||||| || |||| | |||||||||||||||||
Sbjct: 139 atacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtt 80
Query: 64 aat 66
|||
Sbjct: 79 aat 77
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 128/153 (83%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||||| || ||| ||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| ||||||||| | |||||||| ||||||||||| |||
Sbjct: 65 atgaatctagacatatatatgtgtctagat-tcattaacatctatatgaatatgagcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||| | ||||||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggagggag 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 123/150 (82%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | || ||||||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||||||||||||| | |||||||| |||||||| ||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagat-tcattaacatctatatgaatgtgggcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| | |||||| ||| | |||||||||
Sbjct: 39 actagaaagacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| || |||||||||||||||| ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 65 atgaatttagat 76
||||||||||||
Sbjct: 86 atgaatttagat 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||| ||| ||||||||| |||||||||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgct 63
Query: 64 aatgaatttagat 76
||||||| |||||
Sbjct: 64 aatgaatctagat 76
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| || ||||| |||||||||| ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 65 atgaatttagat 76
||||||||||||
Sbjct: 86 atgaatttagat 75
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| ||| ||||| || ||| ||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgct 63
Query: 64 aatgaatttagat 76
||||||| |||||
Sbjct: 64 aatgaatctagat 76
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| | | ||||||||| |||| ||| ||||| ||||||||||||
Sbjct: 90 catcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacggagggag 144
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||
Sbjct: 136 atactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtt 77
Query: 64 aatgaatttagata 77
||||||| ||||||
Sbjct: 76 aatgaatctagata 63
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 100 taacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| ||| ||||| ||| |||||||||||||| ||||||||||||
Sbjct: 75 ttaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggagggag 133
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| ||||||||| ||| || |||||||||||
Sbjct: 132 atacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtt 73
Query: 64 aatgaatt 71
||||||||
Sbjct: 72 aatgaatt 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttc 45
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttc 45
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| || || ||||||||| |||||||| ||||| |||||||||
Sbjct: 71 ttaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggagg 126
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||| || ||
Sbjct: 136 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatt 77
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 76 aatgaatctaga 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
||||| ||||| |||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 4 atactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 80 tatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttat 139
||||||||||||||| | |||| || ||||||||| ||| ||||||||| ||||||||
Sbjct: 57 tatatatgtctagat-tcattaatataaatatgaatgtgggaaatgctagaatgacttac 115
Query: 140 attgtaaaacggagg 154
||||| |||||||||
Sbjct: 116 attgtgaaacggagg 130
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 79 atgaatctaga 69
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 79 ttaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggag 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcat 54
||||||||||||||||| |||| |||||||| |||||||| ||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 65 atg 67
|||
Sbjct: 69 atg 67
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 81 atatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttata 140
|||||||||||||| | ||||||||||||||||| ||| ||||||||| |||||||| |
Sbjct: 52 atatatgtctagatcca-ttaacatcaatatgaatgtgggaaatgctagaatgacttaca 110
Query: 141 ttgtaaaacggagg 154
|| | |||||||||
Sbjct: 111 ttatgaaacggagg 124
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 1 aagatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||
Sbjct: 1 aagatacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Query: 61 gttaatgaatttaga 75
| |||||||| ||||
Sbjct: 61 gctaatgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 140 atactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggag 137
Score = 50.1 bits (25), Expect = 9e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 82 tatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatat 141
||||||||||||| | ||| ||||||||| |||||| |||||||| |||||||| ||
Sbjct: 81 tatatgtctagat-tcattagcatcaatataaatatgagaaatgctaaaatgacttacat 23
Query: 142 tgtaaaacggagg 154
||| |||||||||
Sbjct: 22 tgtgaaacggagg 10
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||| ||| |||||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 65 atgaatttagatagatata 83
|||||| || |||||||||
Sbjct: 65 atgaatctatatagatata 83
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| | | ||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| |||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 65 atgaattt 72
||||||||
Sbjct: 65 atgaattt 72
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 6 acttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaa 65
||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 66 tgaatttagatagatatat 84
||||| |||| | ||||||
Sbjct: 71 tgaatctagacatatatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 79 atatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgactta 138
|||||||||||||||| | ||| |||||||||||||| || |||||||| ||||||||
Sbjct: 53 atatatatgtctagattca-ttatcatcaatatgaatacggaaaatgctaaaatgactta 111
Query: 139 tattgtaaaacggagg 154
|||||| |||||||||
Sbjct: 112 tattgtgaaacggagg 127
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||||| ||| ||||||||||| |||||||| |||||||| || |||||||||
Sbjct: 4 atactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcat 54
||||||||||||||||| |||| |||||||| |||||||| ||| ||||||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 65 atgaat 70
||||||
Sbjct: 72 atgaat 67
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 101 aacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| | ||||||| |||||||||||||| |||||||||
Sbjct: 72 ttaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggagg 127
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt 63
Query: 64 a 64
|
Sbjct: 64 a 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 101 aacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 100 taacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||||| ||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 87 atgaatctaga 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| ||||||||||| |||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 65 at 66
||
Sbjct: 65 at 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| || |||| ||| |||||||| ||||| ||||||||||||
Sbjct: 87 ttaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggag 145
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 79 atgaatctaga 69
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 82 tatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatat 141
||||||||||||| | ||||||||||||||||| ||| ||||| ||| |||||||||||
Sbjct: 63 tatatgtctagattca-ttaacatcaatatgaatgtggaaaatgttagaatgacttatat 121
Query: 142 tgtaaaacggagg 154
| | |||||||||
Sbjct: 122 tatgaaacggagg 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| ||||||||| |||||| || |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| | |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 65 atgaat 70
||||||
Sbjct: 66 atgaat 61
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||| |||||||||||||||| |||||||| |||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||| |||||||||||| | | ||||||||| |||||||| ||||| |||||||||
Sbjct: 66 ttaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggagg 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 65 atgaat 70
||||||
Sbjct: 78 atgaat 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| ||| ||||||||| |||||||| ||| | ||||||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggag 136
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||| ||| |||||| | || ||||||||||||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 65 atgaatttagatagatat 82
|||||| |||||| ||||
Sbjct: 70 atgaatctagatatatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
||||| |||||||||||||||| |||||| |||||||||| || ||||||||
Sbjct: 4 atactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| ||| ||||| ||| ||||||| || || ||||||||||||
Sbjct: 70 ttaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagggag 128
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| |||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 122
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgtta 63
Query: 65 atgaat 70
||||||
Sbjct: 64 atgaat 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcat 54
|||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcatttt-cacattcat 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||| || | | ||||||||| |||||||| ||||| |||||||||
Sbjct: 64 ttaacatcaatatggatgt-gaaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 65 atgaatttagatagatat 82
|| |||||||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 2 agatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||||||||||||||||| |||| |||||||| ||| |||| ||||||||||||||||
Sbjct: 2 agatacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatg 61
Query: 62 ttaatgaatttaga 75
||||||||| ||||
Sbjct: 62 ttaatgaatctaga 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
|||| ||||| ||||| |||| |||||||| |||||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| || |||| |||| |||||||| ||| | |||||||||
Sbjct: 65 ttaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
||||| |||||||||||||||| |||||||| |||||||||||| ||||||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggag 128
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 65 at 66
||
Sbjct: 61 at 62
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 65 atgaat 70
||||||
Sbjct: 70 atgaat 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| ||| ||||||||| |||||||| ||||| |||| |||||||
Sbjct: 70 ttaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagggag 128
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||||||| ||| |||||||| |||||||||||||| |||| ||||
Sbjct: 61 ttaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagagg 6
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa
Japonica Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 65 at 66
||
Sbjct: 65 at 66
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 65 atgaat 70
||||||
Sbjct: 80 atgaat 75
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggagg 158
||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 80 ttaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagt 139
Query: 159 acat 162
||||
Sbjct: 140 acat 143
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| |||||||| | ||||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 65 atgaatttagata 77
|||||| ||||||
Sbjct: 63 atgaatctagata 51
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttcca 47
|||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttcca 47
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| | | ||||||||| |||||||| ||| | ||||||||||||
Sbjct: 63 ttaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggag 121
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||| ||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 65 atgaatttagata 77
|||||| ||||||
Sbjct: 72 atgaatctagata 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 107 aatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggag 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||| ||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||||||||| | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 65 atgaatttagatagata 81
|| ||| || |||||||
Sbjct: 79 ataaatctatatagata 63
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||| ||||| |||||||||| |||||||||||||||||| |||| | ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| | | ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 79 ttaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggag 137
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 133 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 65 atgaatttagata 77
|||||| ||||||
Sbjct: 65 atgaatctagata 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 107 aatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||| ||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 127
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/153 (83%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | ||||| |||| ||||||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| |||| | ||||||||| | |||||||| |||||||| || |||
Sbjct: 98 atgaatctagatatatatgtgtgtctagat-tcattaacatctatatgaatgtgagcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||||| ||||||||||||
Sbjct: 39 gctaggaagtcttacattgtgaaacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | | ||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| |||| | | |||||| |||||||
Sbjct: 65 atgaatctagacacacatatatatctagat 94
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 65 atgaa 69
|||||
Sbjct: 91 atgaa 87
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||||||| |||||||| || |||| |||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtt 63
Query: 64 aatgaa 69
||||||
Sbjct: 64 aatgaa 69
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| ||| ||| |||| |||| |||||||| ||||| |||||||||
Sbjct: 91 ttaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||||||| |||||||| |||||||| ||||||| ||| |||||||
Sbjct: 122 atactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 64 aatgaa 69
||||||
Sbjct: 62 aatgaa 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| ||| ||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 61 ttaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggag 119
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 65 atgaatttagata 77
|||||| ||||||
Sbjct: 65 atgaatctagata 77
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtc 84
Query: 64 aatg 67
||||
Sbjct: 83 aatg 80
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 85 acatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 137
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 11 ctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaat 70
||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 115/143 (80%), Gaps = 16/143 (11%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaat 70
||||||||||||||| |||||||| |||||||||| ||||||||||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattttc-------atattgatgttaatgaat 85
Query: 71 ttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaatgctagc 130
|||||| ||| ||||| | ||||||||||||||||| ||| ||||| |||
Sbjct: 84 ctagata--------tgtttagattca-ttaacatcaatatgaatgtgggaaatgttaga 34
Query: 131 atgacttatattgtaaaacggag 153
|||||||| ||||| ||||||||
Sbjct: 33 atgacttacattgtgaaacggag 11
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| ||| |||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 65 atgaatttagatagatatatatgt 88
|||||| |||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgt 88
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||| |||||| |||| |||| |||||||||||||| |||||||||
Sbjct: 61 catcaatataaatatgagaaatactagaatgacttatattgtgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattt 43
|||| ||||||||||| |||| |||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggaggga 156
|||| |||||||| ||||| ||||||||| |||||||||||||| |||||||||||
Sbjct: 65 ttaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 100 taacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||| |||||| || |||||||| |||||||||||||| |||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggagg 132
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
||||||||||||||| |||||||| |||||||| || || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 70 t 70
|
Sbjct: 70 t 70
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||| |||||| ||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 4 atacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgct 63
Query: 64 aatgaatttagatag 78
||||||| |||||||
Sbjct: 64 aatgaatctagatag 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||| ||||||||||| |||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||| ||| |||||||| |||||||| ||| | ||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggag 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatatt 142
||||| ||||||| ||| ||||||||| ||||||||||||
Sbjct: 61 catcagtatgaatgtggaaaatgctagaatgacttatatt 22
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1 aagatacttcctccgtttcacaatggaagtcattttagcattttccacattcata 55
||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 1 aagatacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattt 43
|||||||||||||||||||| |||||||| ||| ||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggattt 101
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 121 aaatgctagcatgacttatattgtaaaacggagg 154
|||| |||| |||||||||||||| |||||||||
Sbjct: 101 aaatcctagaatgacttatattgtgaaacggagg 134
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 115 atacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgatgct 56
Query: 64 aatgaat 70
|||||||
Sbjct: 55 aatgaat 49
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcat 54
|||| |||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 65 atgaat 70
||||||
Sbjct: 75 atgaat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| ||||||| ||| |||||||| |||||||| |||||||||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 65 atga 68
||||
Sbjct: 65 atga 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| || ||||||||| |||||||||||||| |||||||||
Sbjct: 79 catcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggagg 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| || ||||||||| |||||||| || || |||| |||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggag 7
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 124/150 (82%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||||||||||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | || | ||| ||||||| | |||||||| ||||| |||||| ||
Sbjct: 98 atgaatctaaacatatgtctatatctagat-tcattaacatctatatgcatatgggtaag 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||| ||| | |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagg 10
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/153 (82%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| |||| || ||| || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||||| | | |||||| ||||| | ||| |||| |||||||| ||| |||
Sbjct: 65 atgaatctagatatagacatatgtttagat-tcattaccatctatatgaatgtgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| |||||||| ||| | ||||||||||||
Sbjct: 124 gctaaaatgacttacattatgaaacggagggag 156
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttagatagatatat 84
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttagat 76
|||||||| |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| |||||||| ||||||||| |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 65 at 66
||
Sbjct: 65 at 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| |||||| |||| |||||||| ||| |||| ||||||||||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 65 atgaatttagatagatatat 84
|| ||| |||||| ||||||
Sbjct: 84 ataaatctagatatatatat 65
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
||||||||||||||||||||| |||| ||| |||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||||||| |||||||| |||||||| ||||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 65 atgaat 70
||||||
Sbjct: 75 atgaat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| |||||||| |||||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 65 atga 68
||||
Sbjct: 65 atga 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||| |||||| ||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 75 ttaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||| |||||| ||||| || ||||||||| |||||||||||||| ||||||||||||
Sbjct: 65 ttaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggag 7
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||| || ||||||||| |||||||| ||||| |||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||| ||| ||||||||| ||| |||| ||||| |||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggagg 127
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| ||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 61 catcaatataaatatgggaaatgctataatgacttacattgtggaacggagggag 7
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 123
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| ||| | || ||||||| ||||||||||| | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtt 63
Query: 64 aatgaatttagatagatatat 84
||||||| |||| | ||||||
Sbjct: 64 aatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
||||||||||||||||||||| |||||||||||| |||| |||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcatttta 37
|||| |||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttta 37
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 73.8 bits (37), Expect = 7e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggag 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 77.8 bits (39), Expect = 4e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattt-tagcattttccacattcatattgatgtt 63
|||| |||||||||||||||| ||||| | || ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 64 aatgaatttagatagatat 82
||||||| |||||||||||
Sbjct: 65 aatgaatctagatagatat 83
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 132
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| |||| ||| | || ||||||| |||||||||||| ||||||
Sbjct: 159 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaat 115
||||||| |||| | |||| | ||||||||| | |||||||| ||||||||
Sbjct: 99 aatgaatctagaaatatatgtgtgtctagat-tcattaacatctatatgaat 49
Score = 75.8 bits (38), Expect = 2e-13
Identities = 123/150 (82%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | |||||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | | |||||| ||||||| | |||||||| |||||||| ||| |||
Sbjct: 65 atgaatctagacacacatatatttctagat-tcattaacatctatatgaatgtgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| | | |||| ||| | |||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| |||| ||| | || ||||||| |||||||||||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaat 115
||||||| |||| | |||| | ||||||||| | |||||||| ||||||||
Sbjct: 64 aatgaatctagaaatatatgtgtgtctagat-tcattaacatctatatgaat 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 123/150 (82%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | |||||||||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | | |||||| ||||||| | |||||||| |||||||| ||| |||
Sbjct: 98 atgaatctagacacacatatatttctagat-tcattaacatctatatgaatgtgggcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| | | |||| ||| | |||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| |||||||| ||| ||||| |||||| |||||||| ||
Sbjct: 109 atacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatt 50
Query: 64 aat 66
|||
Sbjct: 49 aat 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcatt 34
|||| |||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||| ||||||||||||| |||||||||||||||||| || ||| | ||| |||||
Sbjct: 4 atacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtt 63
Query: 64 aatgaatttagatagatat 82
||||||| |||| ||||||
Sbjct: 64 aatgaatctagacagatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatat 56
||||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacgga 152
||||||| ||| | |||||| |||||||| |||||||||||||| |||||||
Sbjct: 65 ttaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||||| || ||||||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||||| || ||||||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| |||||||| || |||||| ||| |||||||||||| |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 64 aatgaat 70
|||||||
Sbjct: 72 aatgaat 66
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggaggga 156
|||||||| || ||||| ||| |||||||||||||| |||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| || ||||| ||| |||||||| ||||| ||||||||||||
Sbjct: 75 catcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagggag 129
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 124/151 (82%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| ||| | || ||| ||| |||| | ||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 64 aatgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaa 123
||||||| || ||| ||| |||||||||||| | |||||||| | |||||||||| ||
Sbjct: 99 aatgaatctaaatacatacatatgtctagat-tcattaacatctaaatgaatatgggcaa 41
Query: 124 tgctagcatgacttatattgtaaaacggagg 154
|||||| | | |||| ||||| |||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||||||| ||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcata 55
||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattt 43
|||| |||| ||||||||||| |||||||| ||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| |||||||| |||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 65 atg 67
|||
Sbjct: 65 atg 67
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattga 59
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 105 tcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 109
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
|||||||||||||||| |||||||| |||||||| |||||||||||| |||| ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 70 tttaga 75
| ||||
Sbjct: 73 tctaga 68
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggaggga 156
|||||||||||||| || ||||||||| |||||||| ||||| |||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggaggga 156
|||| ||||||||| || ||||||||| |||||||| ||||| |||||||||||
Sbjct: 81 acataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 135
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||||
Sbjct: 123 atacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtt 64
Query: 64 aa 65
||
Sbjct: 63 aa 62
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||||||||||||||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 65 a 65
|
Sbjct: 65 a 65
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggagg 158
||||||||||||| |||||| |||||||| |||||||| ||||| ||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 159 acat 162
||||
Sbjct: 5 acat 2
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||||||| |||||| |||||||| |||||||||||||| |||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggagg 117
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||| |||||||||||||||| |||||||| ||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattga 59
|||| ||||| ||||| |||| |||||||| ||| ||||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||||| || |||| ||| |||||||| ||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccaca 49
|||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcat 54
|||| |||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggaggacat 162
|||||||| |||||||| ||||| |||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagtacat 2
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacgga 152
||||||||||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
|||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 107 aatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||||||||||| |||||||| |||||||| ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagatatatatgtctagata 95
||||||| |||||||||||| ||||||||||||| |||||| || || |||||||||
Sbjct: 128 tagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctagatt 69
Query: 96 tacttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggaggg 155
| |||||||| |||||||| ||| |||||||| | | |||||| | | ||||||||||
Sbjct: 68 aatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggaggg 9
Query: 156 ag 157
||
Sbjct: 8 ag 7
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | |||||||||| |||||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| |||||| || ||| | |||||||
Sbjct: 96 atgaatctagatatatgtatgtttctagat 67
Score = 48.1 bits (24), Expect = 4e-05
Identities = 75/91 (82%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| ||| | || || |||| ||||||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtt 61
Query: 64 aatgaatttagatagatatatatgtctagat 94
||||||| |||| | ||| |||| |||||||
Sbjct: 62 aatgaatctagaaacatacatatatctagat 92
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||| | || ||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| || | | ||||||||||||||||
Sbjct: 65 atgaatctaaacacatatatatgtctagat 94
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 104 atcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggag 7
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 5 tacttcctccgttt-cacaatggaagtcattttagcattttccacattcatattga 59
|||||||||||||| |||||| |||||||| |||||||| |||||||||||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 105 tcaatatgaatatggcaaatgctagcatgacttatattgt-aaaacggagg 154
||||||||||| ||| ||||||||| |||||||||||||| ||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggagg 111
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | ||| |||||||||||| | ||| |||| | |||||| ||| |||
Sbjct: 65 atgaatctaaacacatacatatgtctagat-tcattagcatctaaatgaatttgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||||| ||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggag 156
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 3 gatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||||| |||||||||||||||| ||| | || ||||||| ||| |||||| | ||||
Sbjct: 160 gatactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgc 101
Query: 63 taatgaatttaga 75
|||||||| ||||
Sbjct: 100 taatgaatctaga 88
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||| ||||| |||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 133 atacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtt 74
Query: 64 aatgaatttagatagatatat 84
||||||| |||| | ||||||
Sbjct: 73 aatgaatctagacatatatat 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcatt 42
||||| ||||||||||| |||| |||||||| |||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||| | |||||||| |||||||| ||| | ||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
|||||||||||||||||||| |||||||| |||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| |||||||| || |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 65 atgaat 70
||||||
Sbjct: 66 atgaat 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||| ||||||||||||||| ||||||||| |||||||| ||| | ||||||||||||
Sbjct: 66 ttaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 107 aatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
||||| ||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| |||||||||||| || || ||||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 65 atgaattta 73
|||||||||
Sbjct: 77 atgaattta 69
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
|||| |||||||||||||||| |||||||| |||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||| ||| ||||||||||||||||||
Sbjct: 69 aaatgctagaatgatttacattgtaaaacggagggag 105
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 92/109 (84%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatttagatagatatatatgtctagatatacttaacatcaa 108
|||||||| |||||||||||||||||| | |||||||||||||| | |||||||| |
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagat-tcattaacatcta 107
Query: 109 tatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||| ||| |||| | | |||| ||||| ||||||||||||
Sbjct: 108 tatgaatatgggcaatactagaaagtcttacattgtgaaacggagggag 156
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||| ||| ||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||||||| |||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | | ||||| | ||||| | |||||||| ||||| |||||| |||
Sbjct: 65 atgaatctagacatgtgtatatatttagat-tcattaacatctatatgtatatggacaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||||| ||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggag 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||||||| |||| || ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| || ||| ||| | ||||||||||
Sbjct: 98 atgaatctaaatatatacacatgtctagat 69
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||| | | ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
||||||||||| | |||||||||||||| | |||||||| |||||||| ||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagat-tcattaacatctatatgaatgtgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| | | |||| ||||| ||||||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggag 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 124/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||| ||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||| |||||| || | |||||||| |||||||||||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaat-tcattaacatctatatgaatatgggcagt 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
|||| | | |||| ||||| ||||||||||||
Sbjct: 39 actagaaagtcttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | |||||||||| ||| |||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | || ||| ||| ||||| | ||||| || ||||| ||||| |||
Sbjct: 98 atgaatctagacatatgtatgtgtttagat-tcattaacgtctatatgtatatgagcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||||| ||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 120/150 (80%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||||||| || || ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | ||| |||||||||||| | |||||||| | |||||||||| |||
Sbjct: 65 atgaatctaaacacatacatatgtctagat-tcattaacatctaaatgaatatgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagg 154
|||| | | |||| ||||| |||||||||
Sbjct: 124 gctaaaaagtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| |||||| |||| |||||||| ||||||||| |||||||| | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
||||| |||| | ||||| || ||||| ||| |||||| |||| |||||| ||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcact-aacatctatatcaatatgagaaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| |||||||| ||| | ||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 1 aagatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgat 60
|||||||| ||||||||||| |||| |||||||| |||||||| || ||| |||| |||
Sbjct: 1 aagatactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagat 60
Query: 61 gttaatgaatttagatagatatatatgtctagat 94
|||| ||||| || || |||||||||||||||
Sbjct: 61 gttagtgaatctaagtatgtatatatgtctagat 94
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| |||||||||||| || || ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 65 atgaattta 73
|||||||||
Sbjct: 65 atgaattta 73
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| || | |||||||||| |||||||||||| ||||||
Sbjct: 143 atactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtt 84
Query: 64 aatgaatttaga 75
||||||||||||
Sbjct: 83 aatgaatttaga 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||| ||||||||||| |||| ||| | || ||||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| |||| ||| ||||||| ||||||||||||| ||||||
Sbjct: 138 atactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtt 79
Query: 64 aatgaatttaga 75
||| ||| ||||
Sbjct: 78 aataaatctaga 67
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 84 tatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatattg 143
||||||||||| || |||||||| |||||||| ||| |||||||| || ||||| |||
Sbjct: 63 tatgtctagattta-ttaacatctatatgaatgtggacaatgctagaataacttacatta 121
Query: 144 taaaacggagggag 157
| ||||||||||||
Sbjct: 122 tgaaacggagggag 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattca 53
|||||||||||||||| |||| |||| ||| ||||||| |||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||||||||| |||| ||| | || ||||||| |||||||||||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 64 aatgaatttaga 75
||||||||||||
Sbjct: 64 aatgaatttaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||| ||||||||||| |||| ||| | || ||||||| |||||||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattc 52
||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| |||| ||| | || ||||||| || |||||||||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | || ||| || ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaat 115
|||||| || | | | |||||||||||||| | |||||||| ||||||||
Sbjct: 98 atgaatctaaacacacatatatgtctagat-tcattaacatctatatgaat 49
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacatt 51
|||| |||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattc 52
|||| |||||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 112 gaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| ||||||||| ||||||| ||||| ||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggaggacat 162
||||||||| |||||||| ||||| |||||||||||| ||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagtacat 119
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||| | || ||||||| ||||||||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 96 atgaatctaga 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | || ||||||| | | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| |||||||| ||| |||| ||| ||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 76 atgaatctaga 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||||||| |||| |||| |||||||| ||| | ||||||||||||
Sbjct: 80 catcaatatgaatatgggaaatactagaatgacttacattatgaaacggagggag 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||||||||||||||||||| |||| ||| ||| |||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||||||||| |||| |||| || ||||| ||||| |||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||||||| ||||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 65 atgaatttaga 75
|| ||| ||||
Sbjct: 80 ataaatctaga 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||| |||||||||||||||| ||| | |||||||||| |||| |||||||| |||||
Sbjct: 4 atactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 86 tgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatattgta 145
||||||||| || |||||||| |||||||| ||| |||||||| | | |||| |||||
Sbjct: 68 tgtctagattta-ttaacatctatatgaatgtggacaatgctagaaagtcttacattgtg 126
Query: 146 aaacggagggag 157
||||||||||||
Sbjct: 127 aaacggagggag 138
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||||||| |||||||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 65 atgaatttaga 75
|| ||| ||||
Sbjct: 74 ataaatctaga 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 83 atatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatatt 142
|||||||||||| || |||||||| |||||||| ||| |||||||| | | |||| |||
Sbjct: 59 atatgtctagattta-ttaacatctatatgaatgtgggcaatgctagaaagtcttacatt 117
Query: 143 gtaaaacggagg 154
|| |||||||||
Sbjct: 118 gtgaaacggagg 129
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 69.9 bits (35), Expect = 1e-11
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 39 cattttccacattcatattgatgttaatgaatttagatagatatatatgtctagatatac 98
||||| |||||||||||| | ||||||||||| |||||| ||||| |||||||||| |
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagat-tca 36
Query: 99 ttaacatcaatatgaatatggcaaatgctag 129
|||||| | |||||||| ||| |||||||||
Sbjct: 35 ttaacacctatatgaatgtggaaaatgctag 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 31 cattttagcattttccacattcatattgatgttaatgaatttagatagatatatatgtct 90
|||| ||||||||||||||||||||| | ||||||||||| |||| | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 91 agat 94
||||
Sbjct: 61 agat 64
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 8 ttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatg 67
||||||||||||| ||| |||||||| ||||||| |||||||||||| ||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 68 aat 70
|||
Sbjct: 68 aat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 122/150 (81%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||||||| ||| ||| |||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| ||| | |||||| ||| |||| | |||||||| |||||||| ||| |||
Sbjct: 96 atgaatctagccacatatat--gtccagattca-ttaacatctatatgaatgtgggcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagg 154
||||| |||||||||||| | |||||||||
Sbjct: 39 gctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 100 taacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||||| ||||| ||| ||||||||| || ||||||||||| ||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggag 7
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| |||| ||| |||||||| ||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattt 43
|||||||||||||||||||||| |||||||| ||||||||
Sbjct: 127 atacttcctccgtttcacaatgtaagtcattctagcattt 88
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||||||| || ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| || ||| ||||| |||||||||
Sbjct: 98 atgaatctatatacttatatgtgtctagat 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 123/153 (80%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||| | || ||||||| ||||||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | ||||| | | ||||| | |||||||| |||||||| || |||
Sbjct: 65 atgaatctagacacatataagtatatagat-tcattaacatctatatgaatgcgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||||| ||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||| |||||||||||||||| |||||||| ||| |||| ||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||| |||| |||||| |||| ||||||||||| |||||| |||||| |||||||||
Sbjct: 144 atactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||||||| || |||| |||| |||||||| ||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 45 ccacattcatattgatgttaatgaatttagatagatatatatgtctagat 94
|||||||||||| ||||||||||||| |||| | ||||||||||||||||
Sbjct: 21 ccacattcatatagatgttaatgaatctagacacatatatatgtctagat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatttagatagatatatatgtctagatatacttaacat 105
||||||||||| ||||| ||||||| |||| | |||||| ||||||||| | |||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagat-tcattaacat 35
Query: 106 caatatgaat 115
| ||||||||
Sbjct: 34 ctatatgaat 25
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||| |||||||||| || ||||||||||||||| || ||| |||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 65 atgaatttagata 77
|||||| ||||||
Sbjct: 46 atgaatctagata 34
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcatt 34
|||||||||||||||||||||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
||||||||||||||||||||| |||| ||| ||| |||| |||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatatt 57
||||||||||||||||||||| |||| ||| || |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||| ||||| |||||||| |||||||| |||||| ||||||||||
Sbjct: 94 atacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgta 35
Query: 64 aatga 68
|||||
Sbjct: 34 aatga 30
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagg 154
|||||||||| ||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 36 acatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagg 88
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacatt 51
||||| |||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 13 ccgtttcacaatggaagtcattttagcattttccacattcatat 56
||||||||||||| |||||||| |||||||| ||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 108 atatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||| ||| ||| ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||||||| ||||| ||||||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggag 147
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 124/153 (81%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||| ||| | ||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| || | | || ||||||||||||| || |||||||| | ||| || ||| |||
Sbjct: 65 atgaatctaaacatatgtatatgtctagattta-ttaacatctaaatgtatgtgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||| ||||| ||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggag 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||||||||||||||| ||| | || ||||||| |||||| ||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 65 atgaatttagatagatatatatgtctagat 94
|| ||| |||| | ||| |||||| |||||
Sbjct: 98 ataaatctagacatatacatatgtttagat 69
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||| |||||||||||||| ||| | || ||||||| |||||||||||| ||| |
Sbjct: 127 atacttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatact 68
Query: 64 aatgaatttaga 75
||||||||||||
Sbjct: 67 aatgaatttaga 56
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaat 70
|||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaat 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 30 tcattttagcattttccacattcatattgatgttaatgaat 70
||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaat 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 103 catcaatatgaatatggcaaatgctagcatgactt 137
||||||||||||| ||| ||||||||| |||||||
Sbjct: 35 catcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagatata 83
|||||||| |||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 2 tagcatttcccacgttcatattgatattaatgaatctagatagatata 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagat 76
|||||||| |||| ||||||||||| ||||||||| |||||
Sbjct: 90 tagcatttcccacgttcatattgatattaatgaatctagat 50
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatat 56
|||||||||||||||| |||| |||||||| ||||||| || ||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| ||| | || |||| || |||||||||| | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| ||| | |||||||| | |||||| |||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 65 atgaat 70
||||||
Sbjct: 94 atgaat 89
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattga 59
|||| |||||||||||||||| |||||||| |||||||| |||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||||||| ||||| ||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 122 aatgctagcatgacttatattgtaaaacgga 152
|||||||| |||||||||||||| |||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcatt 42
|||||| ||||||||||||| |||||||| |||||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| |||||| |||| ||| | || ||||||| ||||||||||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 72 atgaatctaga 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||||||||| ||||| |||| ||| | || ||||||| ||||||||||||| |||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattt 43
||||||||||||||||||||| |||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacat 50
|||||||||||||| ||||||| |||||||| |||||||| ||||||
Sbjct: 4 atacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagc 39
|||| |||||||||||||||| |||||||| ||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 61.9 bits (31), Expect = 2e-09
Identities = 125/155 (80%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| | | ||| | || ||||||| |||||||||||| ||||||
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagatatac-ttaacatcaatatgaatatggcaa 122
||||||| || ||| |||| | ||| || | || | |||||||| |||||||| ||| |
Sbjct: 64 aatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggca 123
Query: 123 atgctagcatgacttatattgtaaaacggagggag 157
||||||| | | |||||| | | ||||||||||||
Sbjct: 124 atgctagaaagtcttataatatgaaacggagggag 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 36 tagcattttccacattcatattgatgttaatgaat 70
||||||| |||||||||||| |||||||||||||
Sbjct: 129 tagcattgcccacattcatatagatgttaatgaat 95
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| ||||||| ||||||||| |||||||||||| | ||| ||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggag 137
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 2 agatacttcctccgtttcacaatggaagtcattttagcattttccacat 50
||||||| ||||||||||| |||| |||||||| ||| |||||||||||
Sbjct: 2 agatactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||| ||||| ||||| ||| |||||||| |||||||||||| ||| |||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||| | |||| |||||||| || |||||||||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 65 atgaatttaga 75
||||| ||||
Sbjct: 78 gtgaatctaga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 82 tatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttatat 141
||||||||||||| ||| |||||| ||| |||| ||| ||||| ||| |||||||| ||
Sbjct: 62 tatatgtctagattcact-aacatccatacgaatgtggaaaatgttagaatgacttacat 120
Query: 142 tgtaaaacggagggag 157
| ||||||||||||||
Sbjct: 121 tataaaacggagggag 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
|||| ||||||||||| |||| |||||||| || ||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacat 50
|||| |||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||||||| ||||| ||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcatt 42
||||| |||||||||||||||| || ||||| |||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||||||| ||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 65 atgaat 70
||||||
Sbjct: 98 atgaat 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||| |||||| ||| | ||||| ||| | |||||||| | |||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatataga 75
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
||||||||||| |||| ||| | || ||||||| ||||||||||||| |||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 70 tttaga 75
| ||||
Sbjct: 43 tctaga 38
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 79/94 (84%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagatatatatgtctagata 95
||||||| |||||||||||| |||||||||||| |||||| |||||| || ||||||
Sbjct: 12 tagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctagat- 70
Query: 96 tacttaacatcaatatgaatatggcaaatgctag 129
| |||||||| |||||||| ||| ||||||||
Sbjct: 71 tcattaacatctatatgaatgtgggcaatgctag 104
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagatatatatgtctagat 94
||||||| |||||||||||| ||||||||||||| ||| | |||||||| |||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctagat 45
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| ||||| ||||| |||| ||| | || ||||||| ||||||||||||| ||||||
Sbjct: 4 atactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtt 63
Query: 64 aatgaatttagata 77
||| ||| ||||||
Sbjct: 64 aataaatctagata 77
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | || ||||||| |||||||||||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 65 atgaat 70
||||||
Sbjct: 80 atgaat 75
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagat 80
|||||||| |||||||||||||||||| ||||||| |||| ||||
Sbjct: 87 tagcatttcccacattcatattgatgtcaatgaatctagacagat 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 39 cattttccacattcatattgatgttaatgaatttaga 75
||||| |||||||||||||||||| ||||||| ||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctaga 41
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 aatggaagtcattttagcattttccacattcatattgatgttaatgaat 70
|||| |||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 27 aagtcattttagcattttccacattcatattgatgttaatgaatttaga 75
|||||||| |||||||| |||||||||||||||| |||||||| ||||
Sbjct: 103 aagtcattctagcatttctcacattcatattgatgctaatgaatctaga 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 81 atatatgtctagatatacttaacatcaatatgaatatggcaaatgctagcatgacttata 140
|||||||||||||| | ||| ||||||||||||| || ||||||||| ||||||||||
Sbjct: 48 atatatgtctagattca-ttagcatcaatatgaatgtgagaaatgctagaatgacttata 106
Query: 141 tt 142
||
Sbjct: 107 tt 108
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 2 agatacttcctccgtttcacaatggaagtcatt 34
|||||||||||||||||||||||| ||||||||
Sbjct: 2 agatacttcctccgtttcacaatgtaagtcatt 34
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattt 43
||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcattt 51
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 123/153 (80%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| |||| ||| | || ||||||| |||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|| ||| || ||| ||| |||||||||| | ||| |||| |||||||| ||| |||
Sbjct: 65 ataaatctatatatataataatgtctagat-tcattagcatctatatgaatgtgggcaat 123
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
| ||| | | |||| ||||| ||||||||||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggag 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||||||||||||||| ||| | || || |||| |||||||||||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgct 100
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||| |||| |||||| |||| || ||||| ||||||| |||||| ||||| ||||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 73 aatgaatctaga 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcatt 42
|||||||||||||||| |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
||||||||||||||||| | | ||| | || ||||||| |||||||||||| ||||||
Sbjct: 127 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 68
Query: 64 aatgaatttaga 75
||||||| ||||
Sbjct: 67 aatgaatctaga 56
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 2 agatacttcctccgtttcacaatggaagtcattttagcat 41
||||||||||||||||||||| || |||||||| ||||||
Sbjct: 2 agatacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttc 45
||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctagcattttc 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 121 aaatgctagcatgacttatattgtaaaacggag 153
||||||||| |||||||||||||| ||||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggag 83
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||||||||||||||| ||| | || ||||| || |||||||||| | ||||||
Sbjct: 140 atacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgtt 82
Query: 64 aatgaat 70
| |||||
Sbjct: 81 attgaat 75
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgt 62
||||| |||||||||||||||| || ||||| ||||||||| || ||| |||||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||||| ||||||||| |||| ||| ||||| ||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggag 102
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtt 63
|||||||||| |||||| |||| ||| | || |||| || |||||||||||| |||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtt 63
Query: 64 aatgaatttagatagatatatatgtctagat 94
||||||| |||| | | |||||||| |||||
Sbjct: 64 aatgaatctagacacacatatatgtttagat 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| |||||| |||| ||| | |||||||||| |||||||||||| ||| | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 65 atgaat 70
||||||
Sbjct: 98 atgaat 93
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||||||||||||||| ||| | || ||||||| |||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 65 atgaatttaga 75
|||||| ||||
Sbjct: 65 atgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | || ||||||| |||||| ||||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 65 atgaat 70
||||||
Sbjct: 87 atgaat 82
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagata 77
||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 8 tagcattgcccacattcatatggatgttaatgaatctagata 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 45 ccacattcatattgatgttaatgaatttaga 75
|||||||||||| ||||||||||||| ||||
Sbjct: 96 ccacattcatatggatgttaatgaatctaga 66
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||| |||| ||| | || ||||||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 65 atgaatttagatagatatatatgtctagat 94
|||||| ||| | | ||||||||||||||
Sbjct: 98 atgaatctaggcacacatatatgtctagat 69
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacat 50
|||| ||||||||||| |||| |||||||| |||||||| ||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| |||| ||||||||||| ||| | || ||||||| |||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcatt 42
|||| |||||||||||||||| ||| | ||||||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcatt 123
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
||||||||| ||||||||||| ||| | || |||| || |||||||||||| ||| |||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 65 atgaat 70
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 2 agatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||||||||||||||||| | | ||| | || ||||||| ||||||||||||| ||||
Sbjct: 140 agatacttcctccgtttcatattataagactttctagcattgtccacattcatatagatg 81
Query: 62 tt 63
||
Sbjct: 80 tt 79
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| ||| | || ||||||| |||||| ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 65 atgaat 70
||||||
Sbjct: 76 atgaat 71
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacatt 51
||||||||||||||||||||| ||| | |||| ||||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatataagactttttggcattgtccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| ||||| || ||| |||||||| | | |||||||||| ||||||||||||
Sbjct: 76 ttaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggag 134
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||| ||||||||||||||| ||| | || ||||||| |||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 65 atgaat 70
||||||
Sbjct: 65 atgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccacatt 51
||||||||||||||||||||| ||| | |||| ||||| ||||||||
Sbjct: 137 atacttcctccgtttcacaatataagactttttggcattgtccacatt 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||||| ||||| || ||| |||||||| | | |||||||||| ||||||||||||
Sbjct: 65 ttaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggag 7
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 78/94 (82%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagatatatatgtctagata 95
||||||| |||||||||||| ||||||||||||| ||| | |||| |||| ||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctagat- 45
Query: 96 tacttaacatcaatatgaatatggcaaatgctag 129
| ||||||| |||||||||||| ||||||||
Sbjct: 44 tcattaacatatatatgaatatgggcaatgctag 11
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaat 70
|||||||||| |||| ||| | || ||||||| |||| ||| |||| |||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 71 ttaga 75
||||
Sbjct: 71 ctaga 67
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 122/153 (79%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
|||||||||||||||| | | ||| | || ||||||| |||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 65 atgaatttagatagatatatatgtctagatatacttaacatcaatatgaatatggcaaat 124
|||||| |||| | |||||| ||| ||| | | |||||||| |||||| | ||| |||
Sbjct: 98 atgaatctagacatatatatgtgtataggt-tcattaacatctatatgattgtgggcaat 40
Query: 125 gctagcatgacttatattgtaaaacggagggag 157
||||| | | |||||| | | ||||||||||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 36 tagcattttccacattcatattgatgttaatgaatttagatagatatatatgtctagat 94
||||||| ||||| |||||| |||||||||||| || | | ||||||||||||||||
Sbjct: 36 tagcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctagat 94
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaa 69
|||||||||||||||| ||| | || ||| ||| |||||||| || | ||||||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54
Query: 70 t 70
|
Sbjct: 53 t 53
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 4 atacttcctccgtttcacaatggaagtcattttagcattttccac 48
||||| ||||||||||| ||| |||||||| |||||||||||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcattttccac 48
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 121 aaatgctagcatgacttatattgtaaaacggagggag 157
||||||||| |||||||||||| | ||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatg 61
||||||||||||||||||||| ||| | || |||| || |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 101 aacatcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggag 157
|||||| ||||||||||| |||||||| | | |||| ||||||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggag 106
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 5 tacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgtta 64
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Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 65 atgaatttagat 76
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Sbjct: 65 atgaatctagat 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 103 catcaatatgaatatggcaaatgctagcatgacttatattgtaaaacggagggaggacat 162
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Sbjct: 84 catctatatgaatatgggtaatgctagaaagtcttatattatgaaacggagggagtacat 143
