miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 200 bits (101), Expect = 5e-51
Identities = 144/157 (91%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||| |||
Sbjct: 160 attactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgt 101
Query: 73 taacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaa 132
||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||
Sbjct: 100 taatgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaa 41
Query: 133 tgttagaatgacttacattgtgaaactggaggaagta 169
|| ||||||||||||||||||||||| ||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 151 bits (76), Expect = 4e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||| | ||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||| |||||| ||||||||||||||||||||||||||| || ||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 5e-48
Identities = 142/156 (91%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
||||||||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac-ggaggaagtag 159
Score = 167 bits (84), Expect = 7e-41
Identities = 129/144 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| | ||||||||||||||| ||||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 141/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||| | |||||||||| || |||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||||||| |||||||||||||| || | ||||||| |||||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 121 bits (61), Expect = 4e-27
Identities = 134/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||| |||||| ||||||||||||| ||| |||||| || || ||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
|| |||||||||||||||||||| ||||| ||||||
Sbjct: 125 ctaaaatgacttacattgtgaaac-ggagggagtagc 160
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 182 bits (92), Expect = 1e-45
Identities = 132/144 (91%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | | |||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 135 ttagaatgacttacattgtgaaac 158
||||||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaac 147
Score = 141 bits (71), Expect = 4e-33
Identities = 136/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| |||||| ||||| ||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||||| || |||||||||||||| ||| ||||||||| || ||||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||| ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaac-ggaggaagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 131/144 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||| || ||||||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| |||||||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac 15
Score = 168 bits (85), Expect = 2e-41
Identities = 140/157 (89%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| |
Sbjct: 4 ttactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| | |||||| |||| |||||||||||| ||||||||| ||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaat 123
Query: 134 gttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||||||||||||||| |||||||||||
Sbjct: 124 attagaatgacttacattgtgaaac-ggaggaagtag 159
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 141/156 (90%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||| | ||||| | || ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|| ||||||||| |||||||||| |||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaac-ggaggaagtag 159
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||| | ||||||| || ||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||||||| ||||||||| |||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaac 15
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 142/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | ||||||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagca 172
|||||||||||||||||||| || ||||| |||||||
Sbjct: 125 ctagaatgacttacattgtgatac-ggagggagtagca 161
Score = 133 bits (67), Expect = 9e-31
Identities = 134/155 (86%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||| | ||||||||||||||||| ||||||| || |||||||||||| ||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
| |||||||||||||||||||| ||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 130/144 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||| ||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| || |||||||||||| || ||||||||| ||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaac 148
Score = 133 bits (67), Expect = 9e-31
Identities = 137/159 (86%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||||||||||| ||||| || |||||||||||| |
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatt 100
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||| | | |||||| ||||||||||||||||| | ||||||| ||||||||
Sbjct: 99 aatgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaat 40
Query: 134 gttagaatgacttacattgtgaaactggaggaagtagca 172
| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 39 gctagaatgacttacattgtgaaac-ggagggagtagca 2
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| ||||||| |||||||||| |||| |||| ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 127 bits (64), Expect = 6e-29
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| || |||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| || |||||| | |||||| ||||||||||||| ||| ||||||||||| | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||| ||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaac 148
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||| || ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|| |||||||||||||||||||| ||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaac-ggaggaagta 5
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | ||||||| || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| | ||||| || |||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||||||| |||||| || ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| || || |||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| |||||||||||||||| ||||||||| ||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 141/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||| ||| ||||||||| ||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagca 172
|||||||||||||||||||||||| ||||| |||||||
Sbjct: 125 ttagaatgacttacattgtgaaac-ggagggagtagca 161
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||| || ||||||||| || ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|||||||||||| |||||||||| ||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 167 bits (84), Expect = 7e-41
Identities = 139/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| ||||||| || |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
||||||||||||| |||||||||| |||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaac-ggaggaagtag 4
Score = 127 bits (64), Expect = 6e-29
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| | ||| || ||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||||| || ||||||||| |||||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||| ||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaac 148
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 167 bits (84), Expect = 7e-41
Identities = 139/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| |||| |||||| |||||| ||| ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|| ||||||||| |||||||||| |||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaac-ggaggaagtag 4
Score = 103 bits (52), Expect = 8e-22
Identities = 121/144 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||| | ||||||| || ||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||| ||| ||||| ||| || |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||||| |||| ||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaac 148
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||| | | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 137 bits (69), Expect = 6e-32
Identities = 126/145 (86%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| | ||||| |||| |||||||||||| ||||||||| || | ||
Sbjct: 64 aatgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatat 123
Query: 134 gttagaatgacttacattgtgaaac 158
| |||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 163 bits (82), Expect = 1e-39
Identities = 141/159 (88%), Gaps = 5/159 (3%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||| ||||| ||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 75 acgaatctagacatatatatccatctagattcattaacatta----atatgaatatggga 130
| ||||||||||||||||||| |||||||||||||||||| | |||||||||| ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 131 aatgttagaatgacttacattgtgaaactggaggaagta 169
|||| ||||||||||||||||||||||| ||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 129/148 (87%), Gaps = 4/148 (2%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat----tgat 70
|||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 71 gctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatggga 130
| ||| ||||||||| | |||||| ||||||||||||||||| | ||||||| |||||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 131 aatgttagaatgacttacattgtgaaac 158
|||| |||||||||||||||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaac 152
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 161 bits (81), Expect = 4e-39
Identities = 133/148 (89%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 12 aattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 2 aattacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 72 ctaacgaatctag-acatatatatccatctagattcattaacattaatatgaatatggga 130
||| |||||||| ||||| |||| | ||||||||||||||| ||||||||| |||||
Sbjct: 62 ttaatgaatctagcacatacatat--gtttagattcattaacatcaatatgaatgtggga 119
Query: 131 aatgttagaatgacttacattgtgaaac 158
|||| |||||||||||||||||||||||
Sbjct: 120 aatgctagaatgacttacattgtgaaac 147
Score = 157 bits (79), Expect = 6e-38
Identities = 138/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| |||||| ||| |||||||||||||||| ||||||||| |||||||||
Sbjct: 97 atgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 123/137 (89%)
Strand = Plus / Minus
Query: 22 tccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaatc 81
||||||| | |||||||||||||| |||||| || ||||||||||||| ||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 82 tagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttagaat 141
|||||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 142 gacttacattgtgaaac 158
|||||||||||||||||
Sbjct: 31 gacttacattgtgaaac 15
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || |||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||| ||| ||||||||| |||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
| |||||||||||||| ||||||
Sbjct: 125 gtggaatgacttacattatgaaac 148
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| | |||||| ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaac 15
Score = 129 bits (65), Expect = 1e-29
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 22 tccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaatc 81
||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 82 tagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttagaat 141
|||| | |||||| |||||||||||||| || || |||||| | | ||||| ||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 142 gacttacattgtgaaac 158
|||||||||||||||||
Sbjct: 132 gacttacattgtgaaac 148
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 131/148 (88%)
Strand = Plus / Minus
Query: 11 taattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||| ||||||||| ||||||||||||||||| | |||| ||| ||||||||||||
Sbjct: 162 taattactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgat 103
Query: 71 gctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatggga 130
||| ||||||||| | |||||| |||||||||||||| || ||||||||| |||||
Sbjct: 102 tttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtggga 43
Query: 131 aatgttagaatgacttacattgtgaaac 158
||||||||||||||||||||||||||||
Sbjct: 42 aatgttagaatgacttacattgtgaaac 15
Score = 151 bits (76), Expect = 4e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| || |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| ||||||||||||||| || ||||||||| || ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| || |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||||| |||||||| || ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac-ggaggaagta 158
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||||||| |||||||| | ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| |||||||||||||| || ||||||||| |||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||| | | ||||| || ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||||||||| |||||||||||||||| | ||||||||| |||||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 127 bits (64), Expect = 6e-29
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||| | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||| ||| ||||| ||| ||||||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||| ||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaac 148
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 155 bits (78), Expect = 3e-37
Identities = 139/157 (88%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||||||||| ||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| || |||||| |||||||| ||||| | ||| ||||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatat--aaatgtgaaatg 122
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
||||||||||||||||||||||| ||||| ||||||
Sbjct: 123 ctagaatgacttacattgtgaaac-ggagggagtagc 158
Score = 129 bits (65), Expect = 1e-29
Identities = 125/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| ||| | ||||||||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttcacattt--atattgatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||| | | |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
| |||||||||||||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaac 15
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 155 bits (78), Expect = 3e-37
Identities = 139/157 (88%), Gaps = 3/157 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||||||||| ||||||| |||||||||||||||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| || |||||| |||||||| ||||| | ||| ||||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatat--aaatgtgaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
||||||||||||||||||||||| ||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggagggagtagc 3
Score = 129 bits (65), Expect = 1e-29
Identities = 125/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| ||| | ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcacattt--atattgatgtta 62
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||| | | |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 135 ttagaatgacttacattgtgaaac 158
| |||||||||||||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaac 146
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 137/156 (87%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||||||||||| ||||| |||||||| ||| ||||||||||||| ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||| | |||| ||| |||||||||||
Sbjct: 38 ctagaatgacttatactgtggaac-ggaggaagtag 4
Score = 121 bits (61), Expect = 4e-27
Identities = 134/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||||||| ||| | ||||||||||| | |||| |||||||||||||||||||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| |||| | |||||| | ||||||||||| ||| |||||||||||| ||||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 125 ttagaatgacttatattgtggaac-ggagggagtagc 160
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 151 bits (76), Expect = 4e-36
Identities = 126/144 (87%), Gaps = 9/144 (6%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaac 139
Score = 133 bits (67), Expect = 9e-31
Identities = 135/156 (86%), Gaps = 10/156 (6%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| || ||||||||||||||||| ||||||||| |||||||||
Sbjct: 89 atgaatctaga-------atg--tctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
||||||||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagtag 4
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||| ||||||||| ||||||||||||||||| ||||||||| ||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
Score = 127 bits (64), Expect = 6e-29
Identities = 134/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| |
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 100
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| |||||||||| ||||||| |||||||||||| ||| |||||||| ||| |||
Sbjct: 99 aatgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaat 40
Query: 134 gttagaatgacttacattgtgaaactggaggaagta 169
| ||||||||| ||||||||||||| ||||||||||
Sbjct: 39 gctagaatgacatacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 151 bits (76), Expect = 4e-36
Identities = 136/155 (87%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||| |||||||||||| ||| ||||||||| |||||||||
Sbjct: 92 atgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 137 bits (69), Expect = 6e-32
Identities = 125/144 (86%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||| ||||||||||||| ||| ||||||||| | |||||||
Sbjct: 65 atgaatctagatatat------gtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||| ||||||||||
Sbjct: 119 ctagaatgacttatattgtgaaac 142
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 127/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||||||||||| || ||||||| | ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| ||||||||||||| |||||||||||||||||| | ||||||| || |||||
Sbjct: 65 atgaatttagacatatatat--atctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaac 146
Score = 127 bits (64), Expect = 6e-29
Identities = 134/155 (86%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| ||| ||||||| | ||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||||||| |||| |||||||||||| | ||||||| |||||||||
Sbjct: 96 atgaatctagatatatatat--gtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||| |||||||||| ||||||||||
Sbjct: 38 ccagaatgacttatattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 124/140 (88%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||||||| ||||||||||||||||| |||||| | ||||||||||||| ||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatgtagacatatatatg--tctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 135 ttagaatgacttacattgtg 154
|||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtg 142
Score = 143 bits (72), Expect = 1e-33
Identities = 136/155 (87%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||||| |||| |||||||||||| ||||||||| | | |||||
Sbjct: 96 atgaatctagacatatatat--gtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||| ||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtggaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| || |||||||||| | | ||||||||||| ||| |||||||||| | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
||||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaac 15
Score = 103 bits (52), Expect = 8e-22
Identities = 121/144 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| || |||||| | || |||||||| ||| |||||||| ||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||||| | ||| ||| ||||| || ||||||||| ||| |||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaac 15
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||| | |||||| || ||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||| ||| | |||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 1e-33
Identities = 123/140 (87%)
Strand = Plus / Minus
Query: 12 aattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||| ||||||||| ||||||||||||||||| |||||| || |||||||| | ||
Sbjct: 161 aattactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtg 102
Query: 72 ctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaa 131
||| |||||||||||| ||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 101 ttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaa 42
Query: 132 atgttagaatgacttacatt 151
||||||||||||||||||||
Sbjct: 41 atgttagaatgacttacatt 22
Score = 101 bits (51), Expect = 3e-21
Identities = 108/127 (85%)
Strand = Plus / Plus
Query: 32 aatgtaagtcattctggcatttctcatattcatattgatgctaacgaatctagacatata 91
||||||||||||||| |||||| || |||||||| | || ||| ||||||||| |||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 92 tatccatctagattcattaacattaatatgaatatgggaaatgttagaatgacttacatt 151
|| |||||||||||||||| |||||||| ||| ||||| ||||||||||||||||
Sbjct: 82 tagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Query: 152 gtgaaac 158
|||||||
Sbjct: 142 gtgaaac 148
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||| |||||||||| | ||||||| || ||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||| || |||||||||||||||||| ||||| ||| |||||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|| |||||||||| ||||||||| ||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaac-ggaggaagta 158
Score = 103 bits (52), Expect = 8e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||| |||||||||| | ||||||| || ||| ||||||||| ||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | | |||| ||||||||||| ||||| ||||| ||| |||||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
| |||||||||| |||||||||
Sbjct: 38 caaaaatgacttactttgtgaaac 15
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 139 bits (70), Expect = 1e-32
Identities = 100/110 (90%)
Strand = Plus / Minus
Query: 37 aagtcattctggcatttctcatattcatattgatgctaacgaatctagacatatatatcc 96
|||||||||| ||||||| || ||||||||||||| ||| |||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgactt 146
|||||||||||||||||| ||||||||| || |||||| |||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 123 bits (62), Expect = 9e-28
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 37 aagtcattctggcatttctcatattcatattgatgctaacgaatctagacatatatatcc 96
|||||||||| |||||||||| ||||||||||||| ||| ||||||||| | ||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgactt 146
||||||||||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 139 bits (70), Expect = 1e-32
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 37 aagtcattctggcatttctcatattcatattgatgctaacgaatctagacatatatatcc 96
|||||||||| ||||||| || ||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgactt 146
|| ||||||||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 37 aagtcattctggcatttctcatattcatattgatgctaacgaatctagacatatatatcc 96
|||||||||| ||||||| || ||||||||||||| ||| ||||||| | | ||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgactt 146
||||||||||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 137 bits (69), Expect = 6e-32
Identities = 126/144 (87%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| ||||||| || || ||||||||| ||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||| ||||||| | |||||||||||||||||| ||||||||| |||||||||
Sbjct: 96 atgaatctggacatatgcct--atctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac 15
Score = 119 bits (60), Expect = 1e-26
Identities = 133/155 (85%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||| || |||||||||||||| ||||| || |||||||||
Sbjct: 65 atgaatctagataggcatat--gtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|||||||||||| |||||||||| ||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaac-ggaggaagta 156
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 122/140 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||| |||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| || |||||||||||| || ||||||||| || |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 135 ttagaatgacttacattgtg 154
|||||||||||| ||||||
Sbjct: 125 ctagaatgacttatattgtg 144
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||||||| ||||| ||||||||||| |||||| ||| |||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| | | |||||| |||||||||||||||| ||||| ||| |||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||| ||||||||||| | ||||||||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||| ||||| || ||||||||| ||||| |||||||| |||||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaac 148
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || |||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| | ||||||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||||| ||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaac 15
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 133 bits (67), Expect = 9e-31
Identities = 136/158 (86%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
|||||||||||| |||| ||||| | |||||||||| |||||||| ||| |||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagca 172
||||||||||||||||||||||| ||||| |||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggagggagtagca 2
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| || |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| || | |||| | ||| || ||||||| |||| ||||||||||||| |||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaac-ggaggaagta 152
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 135/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| |||||| | ||||| || |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||||||| ||||| || | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaata 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
||||||||||||||||||||||| ||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggagggagtagc 3
Score = 97.6 bits (49), Expect = 5e-20
Identities = 123/145 (84%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctca-tattcatattgatgct 73
|||| ||||||||| ||||||||||||||||| | |||| ||| || ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt-tcactagaaatattgatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| | |||||| |||||||||||||| || ||||||||| ||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 134 gttagaatgacttacattgtgaaac 158
||||||| |||||||||||||||
Sbjct: 124 actagaatgtcttacattgtgaaac 148
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 129 bits (65), Expect = 1e-29
Identities = 123/144 (85%), Gaps = 10/144 (6%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 115 ctagaatgacttacattgtgaaac 138
Score = 117 bits (59), Expect = 5e-26
Identities = 126/147 (85%), Gaps = 11/147 (7%)
Strand = Plus / Minus
Query: 23 ccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaatct 82
|||||| ||||||||||||||||| ||||||| || ||||||||||||| ||| ||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 83 agacatatatatccatctagattcattaacattaatatgaatatgggaaatgttagaatg 142
|||||| ||||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 82 ------atatatg--tctagattcattaacattaatataaatgtgggaaatgctagaatg 31
Query: 143 acttacattgtgaaactggaggaagta 169
|||||||||||||||| ||||||||||
Sbjct: 30 acttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 127 bits (64), Expect = 6e-29
Identities = 125/144 (86%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||||||||||||||| ||||| | |||| || |||||||||||| ||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| | |||||| ||||||||||||||||| ||||||||| ||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 135 ttagaatgacttacattgtgaaac 158
||||||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaac 147
Score = 127 bits (64), Expect = 6e-29
Identities = 125/144 (86%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||| || ||||||||||||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||| ||||||||||| ||||
Sbjct: 38 ctagaataacttacattgtaaaac 15
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| ||| | |||| |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||| | | |||||||||||||||||| |||||||||| || ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaac 148
Score = 111 bits (56), Expect = 3e-24
Identities = 132/156 (84%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||| | |||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||| | || |||||||||||||||||| |||||||| || | | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||||||| |||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaac-ggaggaagtag 4
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 127 bits (64), Expect = 6e-29
Identities = 133/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||||| || ||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| || | ||||||||||| |||| ||||||||| |||||||||
Sbjct: 92 atgaatctagacagatgt------ctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 atagaatgacttacattgtgaaac-ggaggaagta 5
Score = 121 bits (61), Expect = 4e-27
Identities = 123/144 (85%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| || ||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||| ||| |||||||||||| |||| ||||||||| |||||||||
Sbjct: 65 atgaatctagac------atctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 119 ctagaatgacttacattatgaaac 142
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 120/139 (86%)
Strand = Plus / Minus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| | ||||||||||||||| ||||||| || |||||||| || | || |||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 80 tctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttaga 139
|||||||||||||||| || |||||||| |||| | |||||||||| ||||||| ||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 140 atgacttacattgtgaaac 158
|||||||||||| ||||||
Sbjct: 33 atgacttacattatgaaac 15
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/145 (83%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| | ||||||||||||||| ||||||| |||||||||| || | |
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
| ||||||| | | |||||| |||||||||| |||| | |||||||| ||||||||
Sbjct: 64 agtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaat 123
Query: 134 gttagaatgacttacattgtgaaac 158
| |||||||||||||||| ||||||
Sbjct: 124 gctagaatgacttacattatgaaac 148
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 135/158 (85%), Gaps = 7/158 (4%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
|||||||||||| |||| ||||| | |||||||||| ||||||||| ||| ||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagca 172
||||||||||||||||||||||| ||||| |||||||
Sbjct: 119 ctagaatgacttacattgtgaaac-ggagggagtagca 155
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| || ||| || ||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| || | |||| | ||| || ||||||| |||| ||||||||| ||| |||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 125 bits (63), Expect = 2e-28
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagatt 105
| ||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatctagatt 95
Score = 103 bits (52), Expect = 8e-22
Identities = 119/144 (82%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata--------- 95
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
||||||| | |||||| ||||||||||||||||| |||||||||||| ||||||
Sbjct: 94 ----atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaac 15
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 4e-27
Identities = 119/139 (85%)
Strand = Plus / Plus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| ||||||||||||||||| |||| ||||| ||||||||||| |||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 80 tctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttaga 139
|||||||||| |||| |||||||||||| |||| ||||||||| || |||||| ||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 140 atgacttacattgtgaaac 158
|||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaac 148
Score = 121 bits (61), Expect = 4e-27
Identities = 119/139 (85%)
Strand = Plus / Minus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| ||||||||||||||||| |||||||||| ||||||||||||| || |||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 80 tctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttaga 139
||||||||||||| | |||||||||| | | ||||||||| || || ||| ||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 140 atgacttacattgtgaaac 158
|||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||| | ||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| | || | ||||| |||||||||||| ||||| || |||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||||||| |||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaac-ggaggaagtag 4
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| ||||| | || || ||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| |||| ||| || | ||||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaac 148
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| |||||| || |||||||| ||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||||||||| |||||||||||||| ||| |||||| || || |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 125 gtagaatgacttacattatgaaac 148
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| | ||||||||||||||| ||| ||| || ||||||||||||
Sbjct: 159 ttactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgct 100
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| | |||||| |||||||||||| ||| |||||||| ||| ||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaat 40
Query: 134 gttagaatgacttacattgtgaaac 158
| |||||||||||||||| ||||||
Sbjct: 39 gctagaatgacttacattatgaaac 15
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||| | |||||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||||| | || |||||||||||||||||| |||||||| || | | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||||||| |||||| |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaac-ggaggaagtag 159
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| ||| | |||| |||||||| |||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||| | | ||||||||||||||||| |||||||||| || ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaac 15
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 119 bits (60), Expect = 1e-26
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 86 catatatatccatctagattcattaacattaatatgaatatgggaaatgttagaatgact 145
||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 146 tacattgtgaaactggaggaagta 169
||||||||||||| ||||||||||
Sbjct: 112 tacattgtgaaac-ggaggaagta 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||||| |||| |||||| |||||||||||| ||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 74 atgaatctaga 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| ||| ||||| |||||||||||||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaac 15
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||||||| | |||| ||||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| |||||| ||||||||||||||||| |||||||| |||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||| |||||||||| |||||| ||||||||||
Sbjct: 38 ctagaaagacttacattatgaaac-ggaggaagta 5
Score = 113 bits (57), Expect = 9e-25
Identities = 123/145 (84%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| | |||||||||| |||| | ||| | || |||||||| |||| |
Sbjct: 4 ttacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| |||||||||||||||||| ||||||||||||||||| ||||||||||| | |||
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaat 123
Query: 134 gttagaatgacttacattgtgaaac 158
| ||||| | |||||||| ||||||
Sbjct: 124 gctagaaagtcttacattatgaaac 148
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 127/148 (85%), Gaps = 9/148 (6%)
Strand = Plus / Minus
Query: 11 taattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||| ||||||||| ||||| ||||||||| | ||||||| |||||||||||||||
Sbjct: 153 taattactccctccgtttcacaatataagtcattttagcatttcccatattcatattgat 94
Query: 71 gctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatggga 130
| ||| |||||||||||| ||||| |||||||||||||||| || ||| |||||
Sbjct: 93 gttaatgaatctagacat--atatctatctagattcattaac------atcaatgtggga 42
Query: 131 aatgttagaatgacttacattgtgaaac 158
|||| ||||| |||||||||||||||||
Sbjct: 41 aatgctagaa-gacttacattgtgaaac 15
Score = 93.7 bits (47), Expect = 8e-19
Identities = 83/94 (88%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 65 attgatgctaacgaatctagacatatatatccatctagattcattaacattaatatgaat 124
||||||| ||| ||||||||| | |||||| ||||||||||||||||| |||||||||
Sbjct: 48 attgatgttaatgaatctagatagatatatg--tctagattcattaacatcaatatgaat 105
Query: 125 atgggaaatgttagaatgacttacattgtgaaac 158
|||||||||| || ||||||||| ||||||||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaac 139
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 113 bits (57), Expect = 9e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 75 acgaatctagacatata 91
| |||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||| ||| ||||| |||||| |||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||| | |||||| || ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 113 bits (57), Expect = 9e-25
Identities = 132/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||||||||||||| |||||| || |||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| | |||||||| |||||| |||||||||||||| || ||||||||| ||||||||
Sbjct: 95 atggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|||||||||||| |||||||||| ||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaac-ggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 123/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||| ||||||||||| | ||||| || |||||||||||| ||
Sbjct: 4 ttacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatact 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| | ||||| ||||||| |||| ||| ||||||||| ||||||||
Sbjct: 64 aatgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaat 120
Query: 134 gttagaatgacttacattgtgaaac 158
| | |||||||||||||| ||||||
Sbjct: 121 ggtggaatgacttacattatgaaac 145
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 132/156 (84%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | |||| ||||| | || |||||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||| ||| | |||||||||||||||| ||||| || |||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
||||| | ||||||||||||||| |||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaac-ggaggaagtag 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| | |||| ||||| | || || ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||| ||| || ||||||||||||| ||| | |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaac 148
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 132/156 (84%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||| | ||||| | || |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| |||||| | | |||||||||||||||||| ||||| ||||||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||||||| |||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaac-ggaggaagtag 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| || || | ||||| ||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||| | || | ||||||||||| ||| |||||||| |||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||||||| ||||||
Sbjct: 125 ctaaaatgacttacattatgaaac 148
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| |||||| || |||||||| ||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||||| |||||||||||||| ||| ||||| || || ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaac 148
Score = 105 bits (53), Expect = 2e-22
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| | ||||||||||||||| | |||| ||| || ||||| ||||||
Sbjct: 159 ttactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgct 100
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| | |||||| |||||||||||| ||| |||||||| ||| ||||
Sbjct: 99 aatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaat 40
Query: 134 gttagaatgacttacattgtgaaac 158
| |||||||||||||||| ||||||
Sbjct: 39 gctagaatgacttacattatgaaac 15
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 91 atatccatctagattcattaacattaatatgaatatgggaaatgttagaatgacttacat 150
||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 151 tgtgaaac 158
||||||||
Sbjct: 119 tgtgaaac 126
Score = 83.8 bits (42), Expect = 8e-16
Identities = 52/54 (96%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 57 aatatgaatatgggaaatgctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| |
Sbjct: 137 ttactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 78
Query: 74 aacgaatctaga 85
|| |||||||||
Sbjct: 77 aatgaatctaga 66
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 109 bits (55), Expect = 1e-23
Identities = 119/143 (83%), Gaps = 13/143 (9%)
Strand = Plus / Plus
Query: 16 acttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaa 75
||||||||||||| | ||||||||||||||| |||||||||| ||| ||||||||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 76 cgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgt 135
||||||| ||||||||||||||||| ||||||||||||| |||||
Sbjct: 66 taaatctag-------------tctagattcattaacatcaatatgaatatggaaaatgc 112
Query: 136 tagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 113 tagaatgacttacattgtgaaac 135
Score = 93.7 bits (47), Expect = 8e-19
Identities = 127/155 (81%), Gaps = 14/155 (9%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |
Sbjct: 146 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 87
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| ||||||||| ||||||| |||||||| ||||| ||| || |||||
Sbjct: 86 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 40
Query: 134 gttagaatgacttacattgtgaaactggaggaagt 168
| |||||||||||||||| |||||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaac-ggaggaagt 6
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 109 bits (55), Expect = 1e-23
Identities = 120/144 (83%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||| || |||||||||||| || ||||| ||||||| |||||
Sbjct: 65 atgaatctag------------atgtagattcattaatatcaatataaatatggaaaatg 112
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 113 ctagaatgacttacattgtgaaac 136
Score = 101 bits (51), Expect = 3e-21
Identities = 119/144 (82%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| |||||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||||||||||||||||||| ||||||||| || ||||||
Sbjct: 86 atgaatcta------------catctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 107 bits (54), Expect = 5e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 105 bits (53), Expect = 2e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 69 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaa 128
Query: 157 actggaggaagta 169
|| ||||||||||
Sbjct: 129 ac-ggaggaagta 140
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 158 c 158
|
Sbjct: 129 c 129
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||| ||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 75 acgaatctagaca 87
| |||||||||||
Sbjct: 79 atgaatctagaca 67
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 76 atctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaa 17
Query: 157 actggaggaagta 169
|| ||||||||||
Sbjct: 16 ac-ggaggaagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 75 acgaatctaga 85
| |||| ||||
Sbjct: 65 atgaatgtaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| | ||||||||||||| | | |||| |||||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 132/156 (84%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||| |||||||| | |||||| ||| |||||||| |||| ||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||||||||| ||| ||||||||||||| | |||||| |||||||||
Sbjct: 96 atgaatctatgcatatatatg--tcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|| |||||||||||||||||||| |||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaac-ggaggaagtag 4
Score = 105 bits (53), Expect = 2e-22
Identities = 122/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | ||||||| || |||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||| |||||||||||| || ||||||||||||||| |||||||| || |||||
Sbjct: 65 atgaatcaagacatatatatgca--tagattcattaacatctatatgaatgtgaaaaatg 122
Query: 135 ttagaatgacttacattgtgaaac 158
|| |||||||| |||| ||||||
Sbjct: 123 ctaaaatgacttgcattatgaaac 146
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 acgaatctagacatata 91
| |||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 75 acgaatctagaca 87
| |||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 130/157 (82%), Gaps = 13/157 (8%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||| |||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||| ||||||||| ||||||||||||| ||||||||| ||| |||||
Sbjct: 86 atgaaactagacata------------gattcattaacatcaatatgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
|||||||||||||||| |||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaac-ggaggaagtagc 3
Score = 93.7 bits (47), Expect = 8e-19
Identities = 118/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| |||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||||| ||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatctatg------------tctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 113 ctagaatgacttacattgtgaaac 136
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 8e-22
Identities = 122/144 (84%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | |||||||||| ||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| |||| |||||| ||||||||||||| ||| ||||| ||| ||| |||||
Sbjct: 65 atgaatttaga----tatatc--tctagattcattagcatcaatataaatgtggaaaatg 118
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||| ||||||||||
Sbjct: 119 ctaaaatgacttatattgtgaaac 142
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||| | |||||| || ||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||| ||||| |||||||| ||| ||| | ||| || ||||||
Sbjct: 92 atgaatctagagatat------atctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|| |||||||||||||||||||| ||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 121/144 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | | || ||||| |||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| | |||| |||||||||||||||||| || ||||| |||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
||| || | |||||||||||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaac 148
Score = 63.9 bits (32), Expect = 7e-10
Identities = 116/144 (80%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | || | |||| | || ||||| || |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||||| | ||||||||||||||||| |||||||| || | ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
||| | | |||||||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaac 15
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 119/144 (82%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||| || |||||||||||| || ||||| ||||||| |||||
Sbjct: 65 atgaatctag------------atgtagattcattaatatcaatataaatatggaaaatg 112
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||||||||||||||
Sbjct: 113 ctataatgacttacattgtgaaac 136
Score = 93.7 bits (47), Expect = 8e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 96 catctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtga 155
||||||||||||||||||| ||||||||| || |||||| ||||||||||||||||||||
Sbjct: 77 catctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtga 18
Query: 156 aac 158
|||
Sbjct: 17 aac 15
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 75 acgaatctagacatatata 93
| |||||||||||||||||
Sbjct: 65 atgaatctagacatatata 83
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaac 15
Score = 85.7 bits (43), Expect = 2e-16
Identities = 113/138 (81%), Gaps = 15/138 (10%)
Strand = Plus / Plus
Query: 21 ctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaat 80
|||||||| ||||||||||||||||| |||||| || ||||||||||||| ||| ||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 81 ctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttagaa 140
||| |||| |||||||||||||||||| ||||||| ||||| |||||
Sbjct: 71 ctaaacat--------atctagattcattaacatcaatatga-------aaatgctagaa 115
Query: 141 tgacttacattgtgaaac 158
||||||||||||||||||
Sbjct: 116 tgacttacattgtgaaac 133
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 64 atctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaa 123
Query: 157 ac 158
||
Sbjct: 124 ac 125
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||||| ||||| ||||||||||| |||||| || |||||||||||||
Sbjct: 3 attacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatg 61
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| |||||| || ||||||||||||| ||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 75 atgaatctaga 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 109 taacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagt 168
|||||| ||||||||| ||| ||||| |||||||||||| |||||||||| |||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaac-ggaggaagt 6
Query: 169 a 169
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 136 ttacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgct 77
Query: 74 aacgaatct 82
|| ||||||
Sbjct: 76 aatgaatct 68
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||| |||| || |||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 75 a 75
|
Sbjct: 65 a 65
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 101 agattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactg 160
|||||||||| ||| ||||||||| || |||||| |||||||||||| |||||||||| |
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaac-g 126
Query: 161 gaggaagta 169
|||||||||
Sbjct: 127 gaggaagta 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 105 tcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||| ||| ||||||||| || |||||| ||||||||||||||| |||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaac 15
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/145 (83%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| |||||||||| | |||| ||||| | ||||||||| | |||| |
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| |||||||||||||| ||| || ||||||||||||||| ||||| | |||| |||
Sbjct: 64 aatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaat 123
Query: 134 gttagaatgacttacattgtgaaac 158
||||| | |||||||||||||||
Sbjct: 124 actagaaagtcttacattgtgaaac 148
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| | ||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 97.6 bits (49), Expect = 5e-20
Identities = 128/155 (82%), Gaps = 17/155 (10%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||||||| | |||| |||||||||||||||||||
Sbjct: 65 atgaatctaga------tatccat----------tgacatcaatatgaatatgggaaatg 108
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 109 ctagaatgacttacattgtgaaac-ggaggaagta 142
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 86
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 95.6 bits (48), Expect = 2e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 102 gattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgg 161
||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| ||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac-gg 13
Query: 162 aggaagta 169
||||||||
Sbjct: 12 aggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 3 attacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 73 taacgaatc 81
||| |||||
Sbjct: 63 taatgaatc 71
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 131/157 (83%), Gaps = 10/157 (6%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||| |||| ||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||| ||| | || | ||||||||||||||| ||||||||| ||| |||||
Sbjct: 89 atgaaacta--------tgtc-acatagattcattaacatcaatatgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
|||||||||||||||| |||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaac-ggaggaagtagc 3
Score = 79.8 bits (40), Expect = 1e-14
Identities = 119/147 (80%), Gaps = 15/147 (10%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| |||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 acgaatcta---gacatatatatccatctagattcattaacattaatatgaatatgggaa 131
| ||||||| |||||| | ||||||||||| ||||||||| || |||
Sbjct: 65 atgaatctatgtgacata------------gtttcattaacatcaatatgaatgtgagaa 112
Query: 132 atgttagaatgacttacattgtgaaac 158
||| |||||||||||||||||||||||
Sbjct: 113 atgctagaatgacttacattgtgaaac 139
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 75 acgaatctagaca 87
| |||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 110 aacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||| ||||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| | ||||||||||||||| ||||||| || |||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 79
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/157 (82%), Gaps = 13/157 (8%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||| ||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
|| ||||||||||||| |||||| ||||| ||||||
Sbjct: 38 gtaaaatgacttacattatgaaac-ggagggagtagc 3
Score = 83.8 bits (42), Expect = 8e-16
Identities = 126/155 (81%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||| | |||||| || ||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||||||||||||||||| ||||||||||| | |||||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatatagtaaatg 112
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|||||||||||| |||||| ||| ||||||||||
Sbjct: 113 ctagaatgacttatattgtggaac-ggaggaagta 146
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | |||| ||||| ||||||| ||||| || | ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||| ||| || ||||||||||||||||| | ||||||||||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
|| || | ||||||||||||||| |||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaac-ggaggaagtag 159
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| | || | ||||| | ||||||||| | |||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||| ||| | ||||||||||||| | ||||| ||||| | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaac 15
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
|||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaac-gga 12
Query: 163 ggaagtag 170
||||||||
Sbjct: 11 ggaagtag 4
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 75 acgaat 80
| ||||
Sbjct: 65 atgaat 70
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 111 acattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||| ||||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaac 119
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 21 ctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||| | ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatg 73
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/157 (82%), Gaps = 13/157 (8%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 112
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagc 171
|| ||||||||||||| |||||| ||||| ||||||
Sbjct: 113 gtaaaatgacttacattatgaaac-ggagggagtagc 148
Score = 83.8 bits (42), Expect = 8e-16
Identities = 126/155 (81%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||| | |||||| || ||||||||||||| ||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| ||||||||||||||||| ||||||||||| | |||||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatatagtaaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|||||||||||| |||||| ||| ||||||||||
Sbjct: 38 ctagaatgacttatattgtggaac-ggaggaagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||| | |||| ||||| | || ||||| || |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| ||||| || ||||||||||||||| |||||||| ||| ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaac 148
Score = 67.9 bits (34), Expect = 5e-11
Identities = 128/158 (81%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||| ||||||||| |||||||||| | |||| ||||| | | |||||||| ||||
Sbjct: 160 attactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgt 101
Query: 73 taacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaa 132
||| ||||||| | | ||||| ||||||||||||| ||| || ||||| |||| ||
Sbjct: 100 taatgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaa 41
Query: 133 tgttagaatgacttacattgtgaaactggaggaagtag 170
|| ||||| | |||||||| |||||| |||||||||||
Sbjct: 40 tgctagaaagtcttacattatgaaac-ggaggaagtag 4
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||||||||| || ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 125 c-ggaggaagta 135
Score = 93.7 bits (47), Expect = 8e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||| || ||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 75 acgaatctagacatatata 93
| |||||||||||||||||
Sbjct: 75 atgaatctagacatatata 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 115 taatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 58 taatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||| ||||| ||| ||||||||||||||||| ||||||| || |||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 8e-19
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 107 attaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaa 166
|||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggaggaa 8
Query: 167 gta 169
|||
Sbjct: 7 gta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| ||||||||| ||| ||||| |||||||||||| ||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaac 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||||||||||||| ||||||||||||||||| ||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 63
Query: 74 aacgaatctag 84
|| ||||||||
Sbjct: 64 aatgaatctag 74
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 99 ctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||||| ||| ||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 159 tggaggaagta 169
||||||||||
Sbjct: 14 -ggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 118/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| | ||||| | ||||||| ||||||||| ||||||||| ||| |||||
Sbjct: 86 atgtatctata------------tctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaac 15
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/155 (81%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| | ||||||| ||| ||| ||||||||| ||||||||| |||||||||
Sbjct: 65 atgtatctagatatagata------------cattaacatcaatatgaatgtgggaaatg 112
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||| ||| ||||||||||
Sbjct: 113 ctagaatgacttacattgtggaac-ggaggaagta 146
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||| | | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| | || | ||||| |||||||||||| |||| || |||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|||||||||||||||| |||||| ||||||||||
Sbjct: 125 ctagaatgacttacattatgaaac-ggaggaagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 120/145 (82%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| | ||||||||||||||| ||||| | || || |||| |||| |
Sbjct: 159 ttacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtt 100
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| |||| |||| ||| || | ||||||||||||||||| |||||||| | || |||
Sbjct: 99 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaat 40
Query: 134 gttagaatgacttacattgtgaaac 158
| |||||||||||||||| ||||||
Sbjct: 39 gctagaatgacttacattatgaaac 15
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 144 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 85
Query: 74 aacgaatctag 84
|| ||||||||
Sbjct: 84 aatgaatctag 74
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 99 ctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||||| ||| ||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 159 tggaggaagta 169
||||||||||
Sbjct: 134 -ggaggaagta 143
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||| |||| ||||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 75 acgaatcta 83
| |||||||
Sbjct: 70 atgaatcta 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||||| |||| ||||| ||||||||| | |||||| || |||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatg 57
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 93.7 bits (47), Expect = 8e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||| ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 63 atcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 122
Query: 157 actggaggaagtagc 171
|| ||||||||||||
Sbjct: 123 ac-ggaggaagtagc 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | ||||||| || ||||||||||||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 75 acgaatc 81
| |||||
Sbjct: 74 atgaatc 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 22 tccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||| ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 111 acattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||| ||||||||| ||| ||||| | ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||||||| | || | ||||| |||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| | |||| ||||||||||||||||| |||||||| |||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||| | |||||||| |||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaac-ggaggaagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||| | |||| ||||| | || |||||||| |||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||||| | ||||||||||||||||| |||||||| || | ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|| || | |||||||| ||||||
Sbjct: 38 ctaaaaagtcttacattatgaaac 15
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||||||| | || | ||||| |||| |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| | |||| ||||||||||||||||| |||||||| |||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||| | |||||||| |||||| ||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaac-ggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||| | |||| ||||| | || |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||| |||||| | ||||||||||||||||| |||||||| || | ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|| || | |||||||| ||||||
Sbjct: 125 ctaaaaagtcttacattatgaaac 148
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 8e-19
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 107 attaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaa 166
|||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggaggaa 8
Query: 167 gta 169
|||
Sbjct: 7 gta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| ||||||||| ||||||||| |||||||||||| ||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||||||||||||| ||||||||||||||||| ||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 67 atgaatctaga 57
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||| || |||||| |||||||||||| ||||||||
Sbjct: 56 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaa 115
Query: 157 actggaggaagta 169
|| ||||||||||
Sbjct: 116 ac-ggaggaagta 127
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||||||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 129 gaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| ||||||| || ||||||||||||| ||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 75 acgaatctagacatatat 92
| | ||||||||||||||
Sbjct: 69 atggatctagacatatat 52
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||| ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 158 ctggaggaagtag 170
| |||||||||||
Sbjct: 119 c-ggaggaagtag 130
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 3 attacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgg 62
Query: 73 taacgaatct 82
||| ||||||
Sbjct: 63 taatgaatct 72
Score = 89.7 bits (45), Expect = 1e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 101 agattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactg 160
|||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac-g 14
Query: 161 gaggaagta 169
|||||||||
Sbjct: 13 gaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 107 attaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| ||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaac 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| |||| |||||||||||| ||||||| || |||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatg 81
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 61 atctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaa 120
Query: 157 ac 158
||
Sbjct: 121 ac 122
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| ||||||| || ||||||||| ||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 72 atgaatctaga 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||||||||||||| |||||||||| | |||| ||||| | || |||||| | | ||
Sbjct: 3 attacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgt 62
Query: 73 taacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaa 132
||| |||||||||||| | ||| || ||||||||||||||| ||||| |||||| ||
Sbjct: 63 taatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaa 122
Query: 133 tgttagaatgacttacattgtgaaac 158
|| ||||| | |||||||||||||||
Sbjct: 123 tgctagaaagtcttacattgtgaaac 148
Score = 69.9 bits (35), Expect = 1e-11
Identities = 126/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | |||| ||||| ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| | ||||| | |||||||||||||||| | |||||| |||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||| | ||||||||||||||| ||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||| | |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 75 acgaatctagacatatat 92
| ||||||||||||||||
Sbjct: 70 atgaatctagacatatat 53
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||| | |||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 120 c-ggaggaagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||||||||||||| ||||||||||| ||||| |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||||| || |||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 76 atctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| ||||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggaggaagta 132
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaact 159
||||||||||||||| ||||||||| ||||| ||| |||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaac- 122
Query: 160 ggaggaagtagcaa 173
||||||||||||||
Sbjct: 123 ggaggaagtagcaa 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| |||| || || ||||||||||||| ||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 75 acgaatctagacat 88
| ||||||| ||||
Sbjct: 72 atgaatctaaacat 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 110 aacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||| ||||||||| ||| ||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac-ggagggagta 5
Query: 170 gcaa 173
||||
Sbjct: 4 gcaa 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||||||||||||||| |||||| || |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| | |||||||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 75 acgaatctagacatatat 92
| ||||||||||| ||||
Sbjct: 65 atgaatctagacaaatat 82
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||| || ||||| |||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||| ||||| ||| | ||||||||||||||| |||||||||| |||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 54.0 bits (27), Expect = 7e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||||||| || |||||| |||||||||||||||| ||||| |||||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaa-tggagggagtag 131
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 107 attaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaa 166
|||||||| ||||||||| | |||||| |||||||||||| |||||||||| |||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaac-ggaggaa 135
Query: 167 gta 169
|||
Sbjct: 136 gta 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||| ||||||||||| ||||| | |||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatg 82
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 138 ttacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 83.8 bits (42), Expect = 8e-16
Identities = 52/54 (96%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 85 aatatgaatatgggaaatgctagaatgacttacattgtgaaac-ggaggaagta 137
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 91 atatccatctagattcattaacattaatatgaatatgggaaatgttaga-atgacttaca 149
||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttaca 24
Query: 150 ttgtgaaac 158
|||||||||
Sbjct: 23 ttgtgaaac 15
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcat-tctggcatttctcatattcatattgatgc 72
||||| ||||||||| |||||||||||| ||| |||||| || |||||||||||||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgt 63
Query: 73 taacgaatctaga 85
||| |||||||||
Sbjct: 64 taatgaatctaga 76
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 36 taagtcattctggcatttctcatattcatattgatgctaacgaatctagacatatat 92
||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 32 aatgtaagtcattctggcatttctcatattcatattgatgctaacgaat 80
||||||||||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||| || ||||| ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 74 tctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 133
Query: 158 ctggaggaagtag 170
| |||||||||||
Sbjct: 134 c-ggaggaagtag 145
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 88
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
||||||||||||||| || ||||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 44 atctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaa 103
Query: 157 actggaggaagta 169
|| ||||||||||
Sbjct: 104 ac-ggaggaagta 115
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||||||||| ||||||| || |||||||||||| ||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 75 acgaatctagacatat 90
| ||||||||| ||||
Sbjct: 55 atgaatctagatatat 40
Score = 50.1 bits (25), Expect = 1e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 136 tagaatgacttacattgtgaaactggaggaagtagca 172
||||||||||||||||||||||| ||||| |||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggagggagtagca 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcat 51
|||| ||||||||| ||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 85 acatatatatccatctagattcattaacattaatatgaatatgggaaatgttagaatgac 144
||||||||||| |||||||||||||| ||| ||||| |||||| ||||| |||||||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 145 ttacattgtgaaactggaggaagta 169
||| |||||||||| ||||||||||
Sbjct: 28 ttatattgtgaaac-ggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 75 acgaatctagacatatatat 94
| ||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatat 60
|||| ||||||||| | ||||||||||||| | ||||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttcacatat 83
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 111 acattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
|||| ||||||||| || |||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac-ggaggaagtag 4
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 126 tgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||||||||||||||||||| |||| |||||| |||||||||||
Sbjct: 92 tgggaaatgttagaatgacttccattatgaaac-ggaggaagtag 135
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 158 ctggaggaagtag 170
| |||||||||||
Sbjct: 129 c-ggaggaagtag 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||| ||||||||||| ||||| || ||||||||||||| ||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 75 acgaatctagacatata 91
| |||||||||||||||
Sbjct: 79 atgaatctagacatata 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| | ||||||||||||||| |||||| ||| ||| || ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatg 61
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| ||||||||||||||||| |||||||||| ||||||||| ||| || |||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 80 tctagacatata 91
||||||||||||
Sbjct: 73 tctagacatata 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||||||| |||| ||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 158 c 158
|
Sbjct: 128 c 128
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||||| ||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 111 acattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||| ||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 129/155 (83%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||||||| | || | ||||| || |||||||| | |||| ||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||| | | ||||||||||||||||| |||||||| |||| ||||
Sbjct: 96 atgaatctagacatatgtgtg--tctagattcattaacatctatatgaatgtgggcaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
||||| |||||||||| |||||| ||||||||||
Sbjct: 38 ctagaaagacttacattatgaaac-ggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||||| |||| ||||| | || |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacat 114
| ||||||||||| | |||| |||||||||||||||||
Sbjct: 65 atgaatctagacacacatat--gtctagattcattaacat 102
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 87.7 bits (44), Expect = 5e-17
Identities = 117/144 (81%), Gaps = 13/144 (9%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||| | ||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
||| ||| ||||||||| |||||||| ||||| |||||| ||||||
Sbjct: 65 g-------------atagatctatctagatttattaacatcaatataaatatgagaaatg 111
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 112 ctagaatgacttacattgtgaaac 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct: 146 ttactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtt 87
Query: 74 aacgaatctaga 85
|| ||||||||
Sbjct: 86 aataaatctaga 75
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa
Japonica Group
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatgcta 64
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 75 acgaatctagac 86
| ||||||||||
Sbjct: 76 atgaatctagac 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||| ||| |||||||||||||||||| |||||||||||||||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 158 c 158
|
Sbjct: 126 c 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
|||||||||||| ||||| |||||| |||||||||||||||| |||||||||||
Sbjct: 57 aatatgaatatgagaaatactagaattacttacattgtgaaac-ggaggaagtag 4
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaact 159
||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaac- 15
Query: 160 ggaggaagtagc 171
||||| ||||||
Sbjct: 14 ggagggagtagc 3
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 75 acgaatcta 83
| |||||||
Sbjct: 65 atgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtagc 171
|||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggagggagtagc 126
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 122/148 (82%)
Strand = Plus / Minus
Query: 11 taattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||| ||||||||| |||||||||| | |||| | ||| | || |||||||| |||
Sbjct: 162 taattactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagat 103
Query: 71 gctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatggga 130
| ||| |||||||||||||||| |||| |||||||||||| |||||||||||||
Sbjct: 102 gttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggc 43
Query: 131 aatgttagaatgacttacattgtgaaac 158
| | ||||| | |||||||||||||||
Sbjct: 42 agtactagaaagtcttacattgtgaaac 15
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | |||| | | | | ||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| |||||| |||| ||||||||||||||||| |||||||| |||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaac 148
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
|||||||||||| ||||||||| | ||||||| ||||||||||||||||||||||| |||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaac-gga 107
Query: 163 ggaagtag 170
||||||||
Sbjct: 108 ggaagtag 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||| ||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 75 acgaat 80
| ||||
Sbjct: 54 atgaat 49
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 119 atgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||| ||||||||| |||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcat 64
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||| |||||||| ||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 126 c-ggaggaagta 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||| |||||||| | ||||||| |||||||||||||||| ||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 75 acgaatctagacatatata 93
| ||||||||||| ||||
Sbjct: 76 ataaatctagacatttata 58
Score = 52.0 bits (26), Expect = 3e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 120 tgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||| |||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaac-ggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattca 63
|||||||||||||| ||||||||||| ||||| | ||||| || |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||| ||||| |||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||| ||| ||||||||| || ||||| |||||| ||||||||||||||
Sbjct: 76 atctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 75 acgaatc 81
| |||||
Sbjct: 65 atgaatc 71
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 102 gattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| | ||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 139 ttactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgct 80
Query: 74 aacgaatc 81
|| |||||
Sbjct: 79 aatgaatc 72
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 102 gattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||| ||||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 128
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 16 acttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaa 75
||||||||||||| ||||| ||||||||| | |||||| | |||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 76 cgaatctagacatatatat 94
||||||||||||||||||
Sbjct: 71 tgaatctagacatatatat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||| ||| |||||||||| || ||||| || ||||||||| |||||||||
Sbjct: 62 tctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaa 121
Query: 158 ctggaggaagt 168
| |||||||||
Sbjct: 122 c-ggaggaagt 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| |||||||| |||||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
||||| ||| |||| ||||||||||||||||| |||||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| | |||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 71.9 bits (36), Expect = 3e-12
Identities = 116/145 (80%), Gaps = 12/145 (8%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| ||||||||| ||||||| |||||| | |||||||||||||||
Sbjct: 147 ttactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgct 88
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| |||| |||| ||||||||||||| ||| ||||| |||||| ||||
Sbjct: 87 aatgaatttaga------------tctagattcattagcatcaatataaatatgaaaaat 40
Query: 134 gttagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 39 actagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 104 ttcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggag 163
||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaac-ggag 11
Query: 164 gaagtag 170
|||||||
Sbjct: 10 gaagtag 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| |||||| |||||||||| ||||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatg 61
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||| | ||||||| |||||||||||||||| ||||
Sbjct: 52 atctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaa 111
Query: 157 ac 158
||
Sbjct: 112 ac 113
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||||| | ||||||||||||| ||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 63 atgaatctaga 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 122 aatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaac-ggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcattt 53
|||||||||||||| ||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||| ||| |||||||||| |||||||||| |||||
Sbjct: 59 atctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaa 118
Query: 157 ac 158
||
Sbjct: 119 ac 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| || |||||||||| ||| ||||| || ||||||||||||| ||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 75 acgaatctagacatatat 92
| ||||||||| ||||||
Sbjct: 70 atgaatctagatatatat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||| ||||||||| |||||| |||||| | | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||| |||||| || | |||||| |||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaac 15
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattg 68
|||||||||||||| ||||||||||||||||| |||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattg 58
Score = 77.8 bits (39), Expect = 5e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
||||||||||| ||||||||| || |||||| ||||||||||||||||||||||| |||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac-gga 12
Query: 163 ggaagta 169
|||||||
Sbjct: 11 ggaagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaac 120
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||| ||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 83.8 bits (42), Expect = 8e-16
Identities = 118/144 (81%), Gaps = 7/144 (4%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| | ||||| || ||| ||||||||| ||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||| || || || || ||| ||||||||||| ||||||||| ||||||||
Sbjct: 91 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||| ||||||||||
Sbjct: 38 atagaatgacttatattgtgaaac 15
Score = 77.8 bits (39), Expect = 5e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 104 ttcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggag 163
||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||| ||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaac-ggag 145
Query: 164 gaagtag 170
|||||||
Sbjct: 146 gaagtag 152
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 83.8 bits (42), Expect = 8e-16
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 41 cattctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatct 100
|||||| |||||| || |||||||| | || ||| |||||||||||| ||||| ||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 101 agattcattaacattaatatgaatatgggaaatgttagaatg 142
||||||||||||| |||||||| |||||||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 52.0 bits (26), Expect = 3e-06
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 49 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 108
|||||| || |||||||| | || ||| ||||||||| ||||||| |||||||||||
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 35
Query: 109 taacattaatatgaatatgggaaatgttagaatg 142
||||| |||||||| ||| ||||| |||||||
Sbjct: 34 taacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 8e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||||||| ||||||||||||||| | ||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 75 acgaatctagacat 88
| ||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtg 154
||||||||||||| ||| ||||| ||||||||||||| || ||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| |||||||||| |||||| ||||||| || |||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatg 76
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 111 acattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
|||| ||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaac-ggaggaagtag 133
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 75 acgaatcta 83
| |||||||
Sbjct: 66 atgaatcta 58
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaact 159
|||||||||||| || |||||||||||| |||||| |||||||||||||||| ||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaac- 116
Query: 160 ggaggaagtagc 171
||||| ||||||
Sbjct: 117 ggagggagtagc 128
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtagc 171
||||| ||| ||| ||||| |||||||||||| |||||||||| ||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaac-ggaggaagtagc 3
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcattt 53
|||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 119/145 (82%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| |||||||||| | |||| | ||| | ||||||||||| |||| |
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtt 100
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
|| |||||||||||||||| |||| |||||||||||| ||||||||||||| | |
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagt 40
Query: 134 gttagaatgacttacattgtgaaac 158
||||| | ||||||| |||||||
Sbjct: 39 actagaaagtcttacatggtgaaac 15
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| || ||||||| | |||| | | | | ||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaac 148
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatg 37
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 105 tcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggagg 164
||||| |||| ||||| ||| || |||||| |||||||||||| ||||| |||| |||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaac-ggagg 88
Query: 165 aagta 169
|||||
Sbjct: 89 aagta 93
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 110 aacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaac-ggaggaagta 131
Query: 170 g 170
|
Sbjct: 132 g 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 75
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||||| ||||||||| ||| ||||| |||||| ||||||||||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||||||||| ||||| |||||| || |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 106 cattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggagga 165
||||||||||||||| ||| || |||||| ||||||||||||||||||||||| ||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaac-ggagga 9
Query: 166 agtag 170
|||||
Sbjct: 8 agtag 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||||||||||||| ||||||||||||||||| |||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatatt 57
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||| | | |||||||| ||||||||||||| ||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 75 acgaatctagaca 87
| |||||||||||
Sbjct: 87 atgaatctagaca 75
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||||||| || ||||| || |||||||||||||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 158 c 158
|
Sbjct: 137 c 137
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 105 tcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggagg 164
|||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggagg 125
Query: 165 aagta 169
|||||
Sbjct: 126 aagta 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||||||||||||||| ||||||| || |||||||| ||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 74
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 108 ttaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||| |||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||||| || |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 75 ac 76
||
Sbjct: 65 ac 66
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 119/144 (82%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||| ||||||||||| | ||| | || |||| ||| ||| |||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||| || |||||| || |||||||||||||| |||||||| |||| ||||
Sbjct: 96 atgaatctagccacatatatg--tccagattcattaacatctatatgaatgtgggcaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||| ||| ||||||
Sbjct: 38 ctagaatgacttatattatgaaac 15
Score = 77.8 bits (39), Expect = 5e-14
Identities = 133/162 (82%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 12 aattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||| ||||||||||| | ||| ||||||||||| ||||| | || |||||||| ||||
Sbjct: 2 aattatttcctccgtttcataatataagtcattctagcattgcccacattcatatagatg 61
Query: 72 ctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaa 131
||| |||||| ||||||||| | |||||||||||| || ||| |||| |||| |
Sbjct: 62 ttaatgaatctggacatatatgtgg--ctagattcattagtatctataagaatgtgggca 119
Query: 132 atgttagaatgacttacattgtgaaactggaggaagtagcaa 173
|| |||||||||||| |||||||||| ||||| ||||||||
Sbjct: 120 atcctagaatgacttatattgtgaaac-ggagggagtagcaa 160
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||| ||| | ||||||||||||||| ||||| | || |||||||| |||| ||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 75 acgaatctagacatatatat 94
| ||||||||||||||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| |||||||| || | |||| |||||||||||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Query: 158 ctggaggaagta 169
|||||||||||
Sbjct: 122 -tggaggaagta 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||| || |||| |||||||||||||||| ||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaac 15
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||| ||||||||| | ||||||||||||||| ||||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
||||||||| || ||||||||| | ||||||| ||||||||||||||||||||||| |||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaac-gga 119
Query: 163 ggaagtag 170
||||||||
Sbjct: 120 ggaagtag 127
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgat 71
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||| |||| | ||||||||||||| | |||||| ||| ||||| | |||| ||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
||||||||||||||||| | |||||||| |||||| |||| |||||| ||||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaac 15
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| |||||||||||||| |||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
||||||| || ||||| |||||||||| |||||| | ||||| || |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|| ||||||||||||| ||||||
Sbjct: 125 ctacaatgacttacattatgaaac 148
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 101 agattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactg 160
||||||||||| || ||| ||||| ||||||||| |||||||||||| |||||||||| |
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaac-g 126
Query: 161 gaggaagtagca 172
||||||||||||
Sbjct: 127 gaggaagtagca 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| ||||| ||||||||||| ||||||| || ||||| ||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgat 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||| ||||||||||| ||||||| || ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgat 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 105 tcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||| || ||| ||||| || |||||| |||||||||||| ||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 91 atatccatctagattcattaacattaatatgaatatgggaaatgttagaatgacttacat 150
||||| |||||||||||||||||| ||||||||| || ||||| ||||||| |||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 151 tgtgaaactggaggaagtag 170
| |||||| |||||||||||
Sbjct: 113 tatgaaac-ggaggaagtag 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||| |||||| ||||| ||| ||||||||||||| ||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 70 atgaatctaga 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||||| ||||||||| ||||| ||||||||||| ||||||| || ||||||||
Sbjct: 3 attactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| ||||||||| |||||||||||| ||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||| | |||||||||||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 75 ac 76
||
Sbjct: 65 ac 66
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||| | |||||||||||||| ||||||||| ||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 75 ac 76
||
Sbjct: 62 ac 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 108 ttaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||| ||||| |||||| |||||| || ||||||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 75 acgaatctag 84
| ||||||||
Sbjct: 71 atgaatctag 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 99 ctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||||| ||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
||||||||| ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| || |||||| |||||||||||| ||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 89 atatatccatctagattcattaacattaatatgaatatgggaaatgttagaatgactt 146
||||||| |||||||| ||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 95 ccatctagattcattaacattaatatgaatatgggaaatgttagaatgactt 146
|||||||||| ||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 52 ccatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||||| |||| ||||| | || |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 75 acgaatctagacatata 91
| |||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| |||||||| |||| |||| ||||| |||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 85 acatatatatccatctagattcattaacattaatatgaatatgggaaatgttagaatgac 144
|||| |||||| |||||||||||||||||| |||||| | || ||||| || ||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 145 ttacattgtgaaactggaggaagta 169
|||||||||||||| ||||||||||
Sbjct: 107 ttacattgtgaaac-ggaggaagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||||||||||||| | |||||| ||| | |||||||||| |
Sbjct: 131 ttacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtt 72
Query: 74 aacgaatctaga 85
|| |||||||||
Sbjct: 71 aatgaatctaga 60
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcatt 44
|||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 128/156 (82%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | |||||||| | |||| ||||| | ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||| |||| | |||||||||||||||||| |||||||| ||| ||||
Sbjct: 65 atgaatctaggtatatgcgtg--tctagattcattaacatttatatgaatgtggacaatg 122
Query: 135 ttagaatgacttacattgtgaaactggaggaagtag 170
||||| | |||||||| |||||| |||||||||||
Sbjct: 123 ctagaaagtcttacattatgaaac-ggaggaagtag 157
Score = 73.8 bits (37), Expect = 7e-13
Identities = 118/144 (81%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||| | |||| ||||| || |||||||| ||| ||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||||||| |||| | |||||||||||||||| ||||||||||| || ||||
Sbjct: 96 atgaatctagacacgcatatac--ctagattcattaacatcaatatgaatataggcaatg 39
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaac 15
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 73.8 bits (37), Expect = 7e-13
Identities = 117/145 (80%), Gaps = 14/145 (9%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| | ||||||||||||||| |||||| ||| ||||||| ||||| |
Sbjct: 4 ttacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaat 133
| |||||||| ||||||||| |||||||| | ||||||| ||||||||
Sbjct: 64 a------------atatatat--atctagatttattaacatcactatgaatgtgggaaat 109
Query: 134 gttagaatgacttacattgtgaaac 158
|||||||||||||||| ||||||
Sbjct: 110 actagaatgacttacattatgaaac 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| |||| |||| | ||||||||||||||| | ||||| || ||||||| ||||| ||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 75 acgaatctagacatatatat 94
| |||||||| ||||||||
Sbjct: 84 ataaatctagatatatatat 65
Score = 54.0 bits (27), Expect = 7e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 107 attaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaa 166
|||||||| | ||||||| || ||||| |||||||||||||||| |||||| |||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaac-ggaggaa 8
Query: 167 gta 169
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||||||||||||||| | |||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaatactagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 73.8 bits (37), Expect = 7e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 118 tatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||||| ||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaac-ggaggaagtag 96
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcata 65
|||||||||||||| ||||||||||||||||| ||||||| || |||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 129 gaaatgttagaatgacttacattgtgaaac 158
|||||| |||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac 15
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttct 55
|||| |||| |||| ||||||||||||||||| ||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttct 45
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| ||| |||||||||||||| ||| |||||| ||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 55
Query: 119 atgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||| ||| ||||| | |||| ||| ||||||
Sbjct: 54 atgaatatgggcaatactagaaagtcttatattatgaaac 15
Score = 56.0 bits (28), Expect = 2e-07
Identities = 115/144 (79%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||| |||| | |||| | ||| | ||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||| ||||| ||||| || ||||||||||||||||| |||||||| ||| |||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 135 ttagaatgacttacattgtgaaac 158
|| || | |||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaac 148
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| ||||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 67.9 bits (34), Expect = 5e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct: 84 aatatgaatgtgggaaatgctagaatgacttatattgtgaaac-ggaggaagta 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
||||| ||| ||||| || ||||| ||| ||| ||||| |||||||||||||||||||||
Sbjct: 76 atctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
||||| ||||||||| ||||||||||||||||| |||||| || ||| ||||||||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgat 60
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||||||| | || | ||||| | || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||| | ||||| ||||||||||||| ||| |||||||| |||| ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
|||||| | |||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaac 148
Score = 69.9 bits (35), Expect = 1e-11
Identities = 126/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | |||| |||| | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||| ||| || |||||| |||| ||| |||||||| |||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 135 ttagaatgacttacattgtgaaactggaggaagta 169
|| || | |||||||| |||||| ||||||||||
Sbjct: 38 ctataaagtcttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| ||||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
||||| ||| ||||| || ||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 76 atctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 67.9 bits (34), Expect = 5e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct: 84 aatatgaatgtgggaaatgctagaatgacttatattgtgaaac-ggaggaagta 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
||||| ||||||||| ||||||||||||||||| ||||||| || ||| ||||||||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgat 60
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||||||||||||| ||||||||||||||||| |||||| ||| | ||||||||| |
Sbjct: 131 ttacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtt 72
Query: 74 aacgaatctaga 85
|| |||||||||
Sbjct: 71 aatgaatctaga 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 91 atatccatctagattcattaacattaatatgaatatgggaaatgttagaatgacttacat 150
||||| |||||||||||||||||| ||||| | || ||||| |||||||||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 151 tgtgaaactggaggaagta 169
|||||||| ||||||||||
Sbjct: 113 tgtgaaac-ggaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||| ||||||||| ||||||||||||||||| | |||||||| ||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaac 15
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| ||| |||||||||||||| ||| |||||| ||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 108
Query: 119 atgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||| ||| ||||| | |||| ||| ||||||
Sbjct: 109 atgaatatgggcaatactagaaagtcttatattatgaaac 148
Score = 56.0 bits (28), Expect = 2e-07
Identities = 115/144 (79%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||| |||| | |||| | ||| | ||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||| ||||| ||||| || ||||||||||||||||| |||||||| ||| |||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 135 ttagaatgacttacattgtgaaac 158
|| || | |||||||||||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaac 15
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
|||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatgct 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 57 aatatgaacgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttc 54
||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 108 ttactccctccgttttacaatgtaaatcattctagcatttc 68
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 57 aatatgaatatgggaaatgctagaatgacttatattgtgaaac 15
Score = 69.9 bits (35), Expect = 1e-11
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 115 taatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct: 66 taatatgaatgtgggaaatgctagaatgacttatattgtgaaac-ggaggaagta 119
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 22 tccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||| ||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||||||||||||| ||||| ||||||||||| ||||||| || |||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctca 57
|||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctca 84
Score = 58.0 bits (29), Expect = 4e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 129 gaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaac-ggaggaagta 126
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 129/159 (81%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | |||| ||| | |||| ||||| | || |||||| | |||| ||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| ||||||| ||| |||||| ||||||||||||||||| || | | || || ||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatg 124
Query: 135 ttagaatgacttacattgtgaaactggaggaagtagcaa 173
|||||| | ||||||||||||||| ||||| ||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaac-ggagggagtagcaa 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 68 gatgctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatg 127
|||| ||| |||||||||||||||||| | ||||||||||||||| | |||||| ||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 128 ggaaatgttagaatgacttacattgtgaaactggaggaagta 169
|| |||| ||||| | ||| |||| |||||| ||||||||||
Sbjct: 45 ggtaatgctagaaagtcttgcattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagtag 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 15 tacttcctccgtttt-acaatgtaagtcattctggcatttctcatattcatattga 69
||||||||||||||| ||||| ||||||||||| ||||||| || |||||||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||||||||| |||||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattga 69
|||||||||||||| ||||| ||||||||||| ||||||| || |||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||
Sbjct: 62 aatatgaatgtgggaaatgctagaatgacttatattgtgaaac-ggaggaagtag 115
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc-cacattcatattgat 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 128 ggaaatgttagaatgacttacattgtgaaac 158
||||||| |||||||||||| ||||||||||
Sbjct: 45 ggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 103/126 (81%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | | | |||| | |||| ||||| | || |||||||| |||||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||||| | ||| ||||||||||| |||||| | |||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 135 ttagaa 140
|||||
Sbjct: 38 ctagaa 33
Score = 48.1 bits (24), Expect = 4e-05
Identities = 91/112 (81%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 61 tcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaatat 120
|||||| |||| ||| ||| ||| ||| |||||| ||||||||||||| ||| ||||
Sbjct: 51 tcatatagatgttaatgaacctatacacatatatatgtctagattcattagcatctatat 110
Query: 121 gaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtagca 172
|||| |||| |||| ||||| | |||| | | |||||| |||||||||||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttataatatgaaac-ggaggaagtagca 161
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 67.9 bits (34), Expect = 5e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| ||| || |||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 75 acgaat 80
| ||||
Sbjct: 64 atgaat 69
Score = 61.9 bits (31), Expect = 3e-09
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
|||||||||||| |||||| || || ||||| ||||||||||||||||||||||| |||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaac-gga 12
Query: 163 ggaagta 169
|||||||
Sbjct: 11 ggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 20 cctccgttttacaatgtaagtcattctggcattt 53
||||||||| ||||||||||||||||| ||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattt 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 130 aaatgttagaatgacttacattgtgaaac 158
||||| |||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaac 102
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 105 tcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||| ||||||||| ||| ||||| || ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||||||||||||| | |||||| || |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 7e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 109 taacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||| ||||||||| ||| ||||| || ||| | ||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaac 118
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 67.9 bits (34), Expect = 5e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| ||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaac-ggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||||||||||||| ||||||||||||||| | ||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 104 ttcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||| | ||| ||| ||||||||| |||||||||||| ||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaac 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||| ||||||||||| ||||||| || ||| ||| |||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatg 65
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||||||||||||||| |||||| ||| || ||||||||| ||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 75 acgaat 80
| ||||
Sbjct: 71 atgaat 66
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
|||||||||||| ||||| || || ||||| ||||||||||||||||||||||| |||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaac-gga 124
Query: 163 ggaagta 169
|||||||
Sbjct: 125 ggaagta 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcattt 53
|||| ||||||||| ||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| ||| |||||||| || |||||| |||||||||||||||||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatatat 31
Query: 119 atgaatatgggaaatgttagaa 140
|||||| |||| |||| |||||
Sbjct: 30 atgaatgtgggcaatgctagaa 9
Score = 52.0 bits (26), Expect = 3e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| ||| ||| ||||||||| |||||||| |||||||||||||||| ||
Sbjct: 25 attcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat 84
Query: 119 atgaatatgggaaatgttagaa 140
|||||| |||| |||| |||||
Sbjct: 85 atgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaact 159
||||||||||||||| ||||||||| ||| |||| || ||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaac- 120
Query: 160 ggaggaagta 169
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||||||||||||| ||||| ||||||||| | | |||| || |||||||||||||
Sbjct: 132 attacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgt 73
Query: 73 taacgaatcta 83
||| |||||||
Sbjct: 72 taatgaatcta 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||||||||||||| | | |||| || |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 127/157 (80%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||||||||||||| |||||||||| | |||| ||||| |||| || ||||| ||||
Sbjct: 160 attacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgt 101
Query: 73 taacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaa 132
||| ||||||| ||| || || |||| |||||||||||| | |||||| | || ||
Sbjct: 100 taatgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaa 41
Query: 133 tgttagaatgacttacattgtgaaactggaggaagta 169
| ||| || | |||||||||| |||| ||||||||||
Sbjct: 40 tattaaaaagtcttacattgtaaaac-ggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 127/158 (80%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 12 aattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||||||||||||||||| | || | ||| | | |||||| | ||||
Sbjct: 2 aattacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatg 61
Query: 72 ctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaa 131
||| |||| ||||||||| || | ||||||||||||||| ||||| || || | |
Sbjct: 62 ttaatgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagca 121
Query: 132 atgttagaatgacttacattgtgaaactggaggaagta 169
||| ||||| | ||||||||||||||| ||||||||||
Sbjct: 122 atgctagaaagtcttacattgtgaaac-ggaggaagta 158
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||||||| | |||||| ||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||| ||||||| ||||| ||||||||| | |||||| ||||||| | ||| ||| ||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtta 64
Query: 75 acgaatctagacatatat 92
| ||||||||||| ||||
Sbjct: 65 atgaatctagacagatat 82
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 90 tatatccatctagattcattaacattaatatgaatatgggaaatgttagaatgacttaca 149
|||||| || ||||||||||||||| ||||| | | ||| ||||| |||||| |||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 150 ttgtgaaac 158
|||||||||
Sbjct: 23 ttgtgaaac 15
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| ||||||||||| ||||| |||||| || | | ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 75 acgaatcta 83
| |||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||||||||| || ||||| ||||||| ||| ||||||||||||||||| |||||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatt 52
|||||||||||||| | ||||||||||||||| |||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcatt 99
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 131 aatgttagaatgacttacattgtgaaactggaggaagta 169
|||| |||||||||||||||| |||||| ||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaac-ggaggaagta 136
Score = 44.1 bits (22), Expect = 7e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||||||||| ||| | ||||| ||||| ||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 75 acgaatctagacatatat 92
| |||||||||| |||||
Sbjct: 65 atgaatctagacttatat 82
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||| |||||||| |||||||| |||| |||| ||||| | ||||||||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 158 ctggaggaagtag 170
| |||||||||||
Sbjct: 124 c-ggaggaagtag 135
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| | |||| ||||| | || |||||||| |||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 75 acgaatctagacatat 90
| |||||||||||||
Sbjct: 74 ataaatctagacatat 59
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| |||||||||||||||||||| | |||| ||||| ||||||||||||| ||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatg 52
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||||| ||||||||||||||| ||||| || |||| ||| |||| |
Sbjct: 139 ttactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtt 80
Query: 74 aacgaatctagacatatatatccat 98
| ||||||||||||||| ||||||
Sbjct: 79 agtgaatctagacatatacatccat 55
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||| ||||||||| | ||||||||||||||| ||||||||| |||||||| ||||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaac 15
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacatt 151
|||||||||| |||||| ||| |||| ||| ||||||||||||||||||||||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 116/144 (80%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||| |||| | |||||||| | |||| || || | || ||| |||| ||| |||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 75 acgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatg 134
| |||||||||||||||| | |||||||||||| ||| |||||||| |||| ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 135 ttagaatgacttacattgtgaaac 158
||||| | |||||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaac 148
Score = 50.1 bits (25), Expect = 1e-05
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
||||| ||||||||| | |||||||| | |||| ||||| | || |||||||| |||||
Sbjct: 159 ttactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgct 100
Query: 74 aacgaatctagacatatatatccatctagattcatta 110
|| |||||||| || | |||| |||||||||||||
Sbjct: 99 aatgaatctaggcacacatatatgtctagattcatta 63
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 taattacttcctccgttttacaatgtaagtcattctggcatttc 54
||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 93 taattacttactccgtttcacaatgtaagtcattctagcatttc 50
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattct 46
|||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattct 36
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 128 ggaaatgttagaatgacttacattgtgaaac 158
||||||| |||||||||||||||||||||||
Sbjct: 49 ggaaatgctagaatgacttacattgtgaaac 79
Score = 52.0 bits (26), Expect = 3e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 136 tagaatgacttacattgtgaaactggaggaagta 169
||||||||||||||||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| | |||| ||||| || |||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 75 acgaatctagacatatatat 94
| ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| | |||||| ||| |||| ||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 114 ttaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||||| |||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 55 ttaatatgaatgtgggaaatactaaaatgacttacattgtgaaac-ggaggaagta 109
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
||||||||||||||| ||||||||||||||| | | ||||| || |||||||||
Sbjct: 110 ttacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcatt 44
|||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||||||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 129 gaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| ||||| ||||||||||| ||||||||||||| |||||||| ||| |||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 80 tcta 83
||||
Sbjct: 70 tcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||||||| || ||||| ||||| |||||| |||||||||||| ||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||| ||||| ||||||||| | |||||| ||| |||||| ||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatg 81
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 71 aatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 105 tcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggagg 164
|||||||||| ||||||||| ||| || || || ||||||||||||| |||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaac-ggagg 10
Query: 165 aagta 169
|||||
Sbjct: 9 aagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| |||| |||| ||||||||||||||||| ||| ||| || ||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
||||||||||||||| | ||||||||||||| | ||| || || |||||||||||||
Sbjct: 4 ttacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||| |||| | ||| |||||| |||| ||||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||||||| ||||||||||| | |||| ||||| |||||| ||| ||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||| |||| | |||| ||||| | ||||||||||| |||||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 80 atgaatctaga 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||| ||| ||||||||||||| |||| ||||| | |||| ||| ||||
Sbjct: 69 atctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaa 128
Query: 157 ac 158
||
Sbjct: 129 ac 130
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
||||||||| |||| | ||| ||||||||||| |||||| || ||||||| ||||||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 75 acgaatctaga 85
| |||||||||
Sbjct: 65 atgaatctaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||| ||| | ||||||| ||| ||||| |||||||||||| ||| ||||
Sbjct: 76 atctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaa 17
Query: 157 ac 158
||
Sbjct: 16 ac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| | ||||||||||||| | ||||||| || |||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatg 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 111 acattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||| ||||||||| ||||||||| || ||||||||||||| ||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaac 128
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcattt 53
|||||||||||||| ||||||||||||||||| ||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 130 aaatgttagaatgacttacattgtgaaactggaggaagta 169
||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaac-ggaggaagta 108
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| ||||||||||||||| | |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttc 44
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 127 gggaaatgttagaatgacttacattgtgaaac 158
|||||||| || ||||||||||||||||||||
Sbjct: 46 gggaaatgctaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||| |||||||| ||||| | | ||| ||||| |||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaac 129
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcattt 53
|||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattt 101
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 93/111 (83%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatt-tctcatattcatattgatgct 73
|||||||||||||| | |||||||| | |||| ||||| ||| | |||||||| |||| |
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtct-acattcatatagatgtt 63
Query: 74 aacgaatctagacatatatatccatctagattcattaacattaatatgaat 124
|| |||||||||||||||| | | ||||||||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaat 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 91/111 (81%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| ||| ||||||| ||| | |||| ||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctat 55
Query: 119 atgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||| | | |||| ||||| | |||||||| |||||| ||||||||||
Sbjct: 54 atgaatgtagacaatgctagaaagtcttacattatgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||||||||||||||| ||||||||||||||| | | |||| || |||||||||||||
Sbjct: 3 attacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatg 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 107 attaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaa 166
|||||||| ||||||||| ||| |||| || |||||||||||||||||||| |||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaac-ggaggaa 8
Query: 167 gta 169
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| || |||||||||||||||||| ||||||||||||||||| ||
Sbjct: 90 attcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctat 31
Query: 119 atgaatatggg 129
|||||| ||||
Sbjct: 30 atgaatgtggg 20
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| ||| ||||||||||| |||||| |||||||||||| |||| ||
Sbjct: 25 attcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctat 84
Query: 119 atgaat 124
||||||
Sbjct: 85 atgaat 90
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 49 catttctcatattcatattgatgctaacgaatctagacatatatat 94
|||||| || ||||||||||||||||| ||| ||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 49 catttctcatattcatattgatgctaacgaatctagacatatatat 94
|||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 81 ctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttag 138
|||||||||||||| |||||||| |||| ||| ||||||||| |||||||||||||
Sbjct: 61 ctagacatatatatg--tctagatttattagcatcaatatgaatgtgggaaatgttag 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttag 138
||||| ||||||| ||| ||||||||| |||||||||||||
Sbjct: 41 tctagtttcattagcatcaatatgaatgtgggaaatgttag 1
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| |||| | ||||| ||||||| ||||| |||| ||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 75 acgaat 80
| ||||
Sbjct: 77 atgaat 72
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
|||||||||||| ||||| ||||| | |||| || |||| ||||||||||||||| |||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaac-gga 130
Query: 163 ggaagta 169
|||||||
Sbjct: 131 ggaagta 137
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 60.0 bits (30), Expect = 1e-08
Identities = 37/38 (97%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 136 tagaatgacttacattgtgaaactggaggaagtagcaa 173
||||||||||||||||||||||| ||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac-ggaggaagtagcaa 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattct 46
|||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattct 36
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||| ||||||| |||| |||||||||||||||| |||||| |||||||||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaac-ggaggaagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||||| || |||| |||| |||||||| ||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 158 c 158
|
Sbjct: 122 c 122
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatat 66
|||||||||||||| | ||||||||||||||| ||||| | ||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| |||| | ||||| ||||||| ||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 75 acgaat 80
| ||||
Sbjct: 65 atgaat 70
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 103 attcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaactgga 162
|||||||||||| ||||| ||||| | |||| || |||| ||||||||||||||| |||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaac-gga 12
Query: 163 ggaagta 169
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| |||| ||| |||||||| ||||||| | |||||||||||||||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaacatatat 31
Query: 119 atgaatatgggaaatgttagaa 140
||||||||||| |||| |||||
Sbjct: 30 atgaatatgggcaatgctagaa 9
Score = 52.0 bits (26), Expect = 3e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 43 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 102
|||| ||||| | ||||||||||| ||| ||| |||||||| |||| |||| ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 103 attcattaacattaatatgaatatgggaaatgttagaa 140
|||||||||||| |||||||| |||| |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||| ||| ||||||||| |||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||| ||| ||||||||| |||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaac 96
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 126 tgggaaatgttagaatgacttacattgtgaaac 158
||||||||| |||||||||||||||||||||||
Sbjct: 107 tgggaaatgctagaatgacttacattgtgaaac 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttc 110
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 23 ccgttttacaatgtaagtcattctggcatttc 54
|||||| ||||||||||||||||| |||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttc 67
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 126 tgggaaatgttagaatgacttacattgtgaaac 158
||||||||| |||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaac 15
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatg 71
|||| ||||||||| ||||||||||||||| | | |||| ||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatg 61
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 11 taattacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattga 69
|||||||| ||||| ||| | ||||||||||||||| | |||| ||| |||||||||||
Sbjct: 120 taattactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 139 aatgacttacattgtgaaactggaggaagtagcaa 173
|||||||||||||||||||| ||||| ||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggagggagtagcaa 1
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 126 tgggaaatgttagaatgacttacattgtgaaac 158
||||||||| |||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaac 15
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatt 52
|||||| ||||||| ||||| ||||||||||| |||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| ||||| || |||||||||||||||| | |||||||||||| ||| ||
Sbjct: 93 attcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcatagat 34
Query: 119 atgaatatgggaaatgttagaatgacttacatt 151
|||||| |||| |||| ||||| | ||||||||
Sbjct: 33 atgaatgtgggcaatgctagaaagtcttacatt 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 97/120 (80%)
Strand = Plus / Plus
Query: 32 aatgtaagtcattctggcatttctcatattcatattgatgctaacgaatctagacatata 91
|||||||| | |||| ||||| | || |||||||| ||||||| |||||||| || | |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 92 tatccatctagattcattaacattaatatgaatatgggaaatgttagaatgacttacatt 151
||| |||||||||||| ||| |||||||| |||| |||||||||| | ||||||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| ||||| ||||||||||| | ||||||| || ||||| || ||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 75 acgaatctagacatata 91
| |||||||||||||||
Sbjct: 79 atgaatctagacatata 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||||||||||| | ||||| || | ||||| |||||||||||| |||||||||
Sbjct: 69 tctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaa 128
Query: 158 ctggaggaagtag 170
| |||||||||||
Sbjct: 129 c-ggaggaagtag 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 118 tatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||| ||| |||| ||||||||||||||||||||||| ||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaac-ggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattct 46
|||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattct 36
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 102 gattcattaacattaatatgaatatgggaaatgttagaatgactt 146
||||||||| ||| ||||||||| ||||||||| |||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 37 aagtcattctggcatttctcatattcatattgatgctaacgaatc 81
|||||||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 40 tcattctggcatttctcatattcatattgatgctaacgaatc 81
||||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||||||||| ||||| |||||| || ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||||||||| ||||| |||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||| ||||| |||||| ||||||||||||||||
Sbjct: 73 aatatgaatgtggnaaatgctagaataacttacattgtgaaac 115
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||| ||||| |||||| ||||||||||||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaac 15
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| | |||| ||||| |||| ||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 75 acgaatctagaca 87
| |||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| | ||||| || | |||| ||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaa 16
Query: 158 ctggaggaagtag 170
| |||||||||||
Sbjct: 15 c-ggaggaagtag 4
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 attcatattgatgctaacgaatctagacatatatat 94
|||||||| |||||||| ||||||||||||||||||
Sbjct: 94 attcatatagatgctaatgaatctagacatatatat 59
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||||||||||||| |||||| |||||||||| | |||| ||| ||| ||||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgat 53
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattct 46
||||| ||||||||| |||||||||||||||||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcattct 36
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 136 tagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaac 15
Score = 44.1 bits (22), Expect = 7e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 136 tagaatgacttacattgtgaaactggaggaagta 169
||||||||||| ||||||||||| ||||||||||
Sbjct: 76 tagaatgacttgcattgtgaaac-ggaggaagta 108
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||||||||| ||||| |||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgat 70
|||| ||||||||| ||||||||||| ||||| |||||| || ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||| ||||| |||||| ||||||||||||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||| ||| ||||| |||||| ||||||||||||||||
Sbjct: 73 aatatgaatgtggaaaatgctagaataacttacattgtgaaac 115
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 126 tgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| ||||||||||||||||||| ||| ||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtggaac-ggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
||||||||||||| ||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttc 44
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattct 46
|||| ||||||||| |||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattct 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 136 tagaatgacttacattgtgaaac 158
|||||||||||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaac 84
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| | |||||||| | |||| ||||| ||||||||||| |||| |||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 80 tctagaca 87
||||||||
Sbjct: 70 tctagaca 77
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||| ||||||| |||||||||||| |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaa 140
||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 66 tctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaa 140
|||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 7e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 115 taatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
|||||||||| |||||||| || ||| |||||||||||||||| ||||||||||
Sbjct: 87 taatatgaatgtgggaaattctacaataacttacattgtgaaac-ggaggaagta 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 14 ttacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
||||||||||||||| ||||||||||| ||| | |||||||| |||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatatt 67
|||||||||||||| ||||||||||| ||| | | ||||| || |||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 44.1 bits (22), Expect = 7e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||||||| || ||||| || ||| |||||||||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcattt 53
|||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattt 78
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 121 gaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||||| ||||| ||||||||||| |||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaac 15
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 130 aaatgttagaatgacttacattgtgaaac 158
||||| |||||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaac 106
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| | |||||| |||| |||| ||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaac 15
Score = 52.0 bits (26), Expect = 3e-06
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||| |||| |||| |||||||||| | |||| ||||| | || |||||| | ||||
Sbjct: 3 attactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgt 62
Query: 73 taacgaatctagacatatatatccatctagattcattaacat 114
||| ||||||| |||||| ||| | |||||||||||||||
Sbjct: 63 taatgaatctaaacatatgtatgtgtttagattcattaacat 104
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 7e-07
Identities = 64/76 (84%), Gaps = 4/76 (5%)
Strand = Plus / Plus
Query: 59 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 118
|||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| ||
Sbjct: 15 attcatatatatgttaatgaatctagacatatatatc----tagattcattaacatatat 70
Query: 119 atgaatatgggaaatg 134
|||||| |||| ||||
Sbjct: 71 atgaatgtgggcaatg 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgtta 137
||||||||||||||||| |||||||| |||| |||||||
Sbjct: 41 tctagattcattaacatatatatgaatgtgggcaatgtta 2
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 30 acaatgtaagtcattctggcatttctcatattcatattgatgctaacgaat 80
|||||| |||||||| | ||||||| || ||||||||||||||||| ||||
Sbjct: 99 acaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 119 atgaatatgggaaatgttagaatgacttacattgtgaaac 158
|||||| || |||||| |||||||| ||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaac 15
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| |||||||| |||| |||| ||||| | |||||||| ||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaac 130
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 taattacttcctccgttttacaatgtaagtcattctggcattt 53
||||||||| |||||||| ||||| ||||||||||| ||||||
Sbjct: 93 taattacttactccgtttcacaatataagtcattctagcattt 51
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcat 51
|||||||||||||| ||| ||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 44.1 bits (22), Expect = 7e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 136 tagaatgacttacattgtgaaactggaggaagta 169
|||||||||||||| |||||||| ||||||||||
Sbjct: 37 tagaatgacttacactgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcatt 44
|||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaa 156
|||||||||||||| || ||||| |||||| ||||| || ||||| ||||||||||||
Sbjct: 35 atctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaa 94
Query: 157 a 157
|
Sbjct: 95 a 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 139 aatgacttacattgtgaaactggaggaagta 169
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaac-ggaggaagta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 90/110 (81%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 60 ttcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaata 119
||||||| |||| || ||||||| ||| |||||| |||||||||||| |||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 120 tgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagta 169
||||| |||| |||||||||| | |||| | | |||||| ||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaaagtcttataatatgaaac-ggaggaagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 77 gaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgtt 136
||||||| |||||||| | ||||||||||||||||| |||||||| |||| || | |
Sbjct: 96 gaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaaggct 37
Query: 137 agaatgacttacattgtgaaac 158
|||| | |||||||| ||||||
Sbjct: 36 agaaagtcttacattatgaaac 15
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 43 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 102
|||||||||| | || |||||||| ||| ||| ||||||||||||||||| | ||
Sbjct: 33 ttctggcattgcccacattcatatatatgttaataaatctagacatatatatgtgccaag 92
Query: 103 attcattaacattaatatgaatatgggaaatgttagaa 140
|||||||||||| |||||||| |||| |||| |||||
Sbjct: 93 attcattaacatatatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 116/146 (79%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
|||||||||||||||| |||||||||| | || | | ||| | |||||| | ||||
Sbjct: 3 attacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgt 62
Query: 73 taacgaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaa 132
||| ||||||| |||||| ||| |||||||| |||||||| | ||| || |||| ||
Sbjct: 63 taatgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaa 122
Query: 133 tgttagaatgacttacattgtgaaac 158
|| ||||| | |||||||||||||||
Sbjct: 123 tgctagaaagtcttacattgtgaaac 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| |||||||||| | |||| ||||| | || || ||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 75 acgaatctagacatatatatccatctagattcattaacat 114
| |||||||||||||| || | |||||||||||||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacat 59
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| |||| ||||||| |||| ||||| | |||||||| |||||
Sbjct: 67 tctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaa 126
Query: 158 c 158
|
Sbjct: 127 c 127
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatg 134
|||||||||||| |||| ||||||||| |||||||||
Sbjct: 41 tctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatg 134
|||||||||||| |||| ||||||||| |||||||||
Sbjct: 48 tctagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||| |||||||||||| |||||||| |||| |||| ||||| | |||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 158 c 158
|
Sbjct: 15 c 15
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 126 tgggaaatgttagaatgacttacattgtgaaac 158
||||||||| |||||||||||||||| ||||||
Sbjct: 86 tgggaaatgctagaatgacttacattatgaaac 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttc 54
|||| ||||||||| | ||||||||||||||| |||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttc 89
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 129 gaaatgttagaatgacttacattgtgaaac 158
||||||||||||||||||| ||| ||||||
Sbjct: 44 gaaatgttagaatgacttatattatgaaac 15
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
|||||||| |||||||| |||||||| ||| |||| ||||| | ||||||||||||||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 158 c 158
|
Sbjct: 130 c 130
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 13 attacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgc 72
||||||| |||||||| | |||||||| | |||| ||||| | ||||||||||| |||||
Sbjct: 3 attactttctccgtttcataatgtaagactttctagcattgcccatattcatatagatgc 62
Query: 73 t 73
|
Sbjct: 63 t 63
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 117 atatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||| |||| ||||| | |||||||| ||||||
Sbjct: 56 atatgaatatgggcaatgctagaaagtcttacattatgaaac 15
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| |||||||| ||| |||| ||||| | |||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 158 c 158
|
Sbjct: 122 c 122
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 90 tatatccatctagattcattaacattaatatgaatatgggaaatg 134
|||||| ||||||||||||||| || |||||||| |||||||||
Sbjct: 49 tatatctatctagattcattaatatcaatatgaacgtgggaaatg 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 60 ttcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaata 119
||||||||||| ||| ||||||||| | ||||| ||||||||||||||| || ||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaata 72
Query: 120 tgaatatgggaaatg 134
|||| |||||||||
Sbjct: 73 tgaacgtgggaaatg 87
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | ||||||||| ||||| ||||| | || ||||| || |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattcacatagatgcta 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 120 tgaatatgggaaatgttagaatgacttacattgtgaaactggaggaagtag 170
||||| |||| |||| |||||| ||||||||| |||||| |||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaac-ggaggaagtag 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||| ||||||||| | ||||||||| ||||| ||||| || |||||||| |||| ||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 75 acgaatctagacata 89
| ||||||||||||
Sbjct: 77 ataaatctagacata 63
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | | | |||| | |||| ||||| | || |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 75 acgaatctagacatatatat 94
|||||||||| |||| ||||
Sbjct: 65 acgaatctaggcatacatat 84
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 20 cctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgctaacgaa 79
||||||||| | |||||||| | |||| ||||| || |||||||| |||| |||||||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 80 tctagaca 87
||||||||
Sbjct: 43 tctagaca 36
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 97 atctagattcattaacattaatatgaatatgggaaatgttagaa 140
|||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 88 atctagattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| |||||||| |||| |||| ||||| | |||| | | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 116 c-ggaggaagta 126
Score = 44.1 bits (22), Expect = 7e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| | | | |||| | |||| ||||| | || |||||||| |||| ||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 75 acgaatctagacat 88
| ||||||||||||
Sbjct: 66 atgaatctagacat 53
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgcta 74
|||||||||||||| |||||||||| | || | || || | || |||||| | |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 75 acgaatctagacatat 90
| ||||||||||||||
Sbjct: 65 atgaatctagacatat 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| | |||||| |||| || | || || | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaa 16
Query: 158 ctggaggaagta 169
| ||||||||||
Sbjct: 15 c-ggaggaagta 5
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| ||||| || |||| |||| ||||| | |||| ||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaac 126
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 100 tagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaac 158
||||||||||||||| ||||| || |||| |||| ||||| | |||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaac 15
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatatt 61
|||||||||||||||| ||| |||| | |||| ||||| ||||||||
Sbjct: 5 tacttcctccgttttataatataagactttctagcattgctcatatt 51
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaa 140
||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 62 tctagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 98 tctagattcattaacattaatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||||||||||||||| ||| ||| |||| |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 158 ctg 160
|||
Sbjct: 15 ctg 13
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 15 tacttcctccgttttacaatgtaagtcattctggcatttctcatattcatattgatgct 73
|||| ||||| ||| | ||| ||||||||||| |||||| |||||| |||||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatgct 81
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 116 aatatgaatatgggaaatgttagaatgacttacattgtgaaa 157
||||| ||||||| ||||| |||||||||||| ||| |||||
Sbjct: 87 aatataaatatggaaaatgctagaatgacttatattatgaaa 128
