miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 140/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 159 ttactccctccgtttcacaatgta--agtcattctagtatttttcacattcatattgatt 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 101 ttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaa 42
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
||| || |||||||||||||||||| || |||||
Sbjct: 41 atgttagaatgacttacattgtgaaacggaggga 8
Score = 115 bits (58), Expect = 2e-25
Identities = 130/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctaacatttcccacattcatattgatat 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | |||||||||||||| |||||||||||| | |||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
| ||| |||||||||||||||||| || |||||
Sbjct: 123 tactagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 140/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| ||||| |||||||||||||||
Sbjct: 159 ttactccctccgtttcacaatgta--agtcattctaacattttccacattcatattgata 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||
Sbjct: 101 ttaatgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaa 42
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| |||||||||||||||||| || |||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggga 8
Score = 115 bits (58), Expect = 2e-25
Identities = 130/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatagtgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | | |||||||||||| |||||||||||| | | |||
Sbjct: 63 taatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| || |||||||||||||||||| || |||||
Sbjct: 123 tgttagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 6e-47
Identities = 139/153 (90%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||| ||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct: 158 tactccctccgttccacaatata--agtcattctagcatttttcacattcatattgatat 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||
Sbjct: 100 taatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggga 8
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacatttatattggtgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | | |||||||||||| |||||||||||| | |||
Sbjct: 63 taatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaa 122
Query: 123 tgctaaaatgacttacattgtg 144
||||| ||||||||| ||||||
Sbjct: 123 tgctagaatgacttatattgtg 144
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 133/146 (91%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaatgaa 69
||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgta--agtcattctaccatttctcacattcatattgatgttaatgaa 69
Query: 70 tctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaatgctaaa 129
|||| ||||||||||||||||||||||||||| ||||| |||||| ||| |||||||| |
Sbjct: 70 tctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctaga 129
Query: 130 atgacttacattgtgaatcgaaggga 155
||||||||||||||||| || |||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
Score = 113 bits (57), Expect = 8e-25
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| | |||||| ||||| |
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagcattttctaaattcatgttgatat 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||||||||||||||||| | ||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
|| || ||||||||||||||||||
Sbjct: 40 tggtagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/153 (90%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| ||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcattttccacattcgtattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 63 taatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||||||| |||||||| || |||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggaggga 155
Score = 121 bits (61), Expect = 3e-27
Identities = 124/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| ||||| | |||||||||||||
Sbjct: 158 tactccctccgtttcacaatata--agtcattctagcattttctatattcatattgatgc 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | |||||| ||||||||||||||| |||| | | |||
Sbjct: 100 taatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/153 (90%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| | |||
Sbjct: 100 taatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggga 8
Score = 153 bits (77), Expect = 9e-37
Identities = 128/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattttccatattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||||||||||||||||| | |||||
Sbjct: 63 taatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaa 146
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/153 (90%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| ||||||| || |||| |||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatata--agtcattttagcatttcccacattcatattaatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct: 100 taatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctataatgacttacattgtgaaacggaggga 8
Score = 129 bits (65), Expect = 1e-29
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
|||||||||||||||||||||||||||| | | |||||| | |||||||||||||||||
Sbjct: 46 cacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacatt 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| | |||||||||||||||||||| ||||||||
Sbjct: 106 aatatgaatgtgggaaatgctaaaatgacttatattgtgaa 146
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/153 (90%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcattttccacatccatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
| ||| |||||||||||||||||| || |||||
Sbjct: 123 tactagaatgacttacattgtgaaacggaggga 155
Score = 137 bits (69), Expect = 5e-32
Identities = 126/144 (87%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagtatttcccacattcatattgttgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | |||||||||||||||||||||||| || | | |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/153 (89%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatat--aagtcattctagcatttctcacattcatattgatac 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||||||||||||||||||||||||| ||||||||||||| | | |||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| || |||||||||||||||||| || |||||
Sbjct: 123 tgttagaatgacttacattgtgaaacggaggga 155
Score = 113 bits (57), Expect = 8e-25
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctaacatttaccacattcatattgatgc 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||| |||||||||||| | ||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||| ||||||||
Sbjct: 40 tgctagaatgacttatattgtgaa 17
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 141/159 (88%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatat--aagtcattctaactttttccacattcatattaatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| |||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 63 taatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaagggaatacat 161
||||| ||||||||| |||||||| || ||||| |||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggagggagtacat 161
Score = 121 bits (61), Expect = 3e-27
Identities = 124/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| |||| ||||||||||||||| |
Sbjct: 158 tactccctccgtttcacaatata--agtcattctagcatttcccacattcatattgatat 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| |||||| | ||||||||||||||||| ||||||||| | | |||
Sbjct: 100 taatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
| || ||||||||| ||||||||
Sbjct: 40 agttagaatgacttatattgtgaa 17
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 165 bits (83), Expect = 2e-40
Identities = 137/153 (89%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||| ||||||||||
Sbjct: 156 tactccctccgtttcacaatgta--agtcattctagcattt--cacatttatattgatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 100 taataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|||| |||||||||||||||||| || |||||
Sbjct: 40 tgcttgaatgacttacattgtgaaacggaggga 8
Score = 101 bits (51), Expect = 3e-21
Identities = 129/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||| | |||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattcaagcatttcccatattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | | |||||| |||||||||||||| ||| | ||||
Sbjct: 63 taatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaa 120
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggaggga 153
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 165 bits (83), Expect = 2e-40
Identities = 137/153 (89%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattt--cacatttatattgatgt 60
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 taataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaa 120
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|||| |||||||||||||||||| || |||||
Sbjct: 121 tgcttgaatgacttacattgtgaaacggaggga 153
Score = 101 bits (51), Expect = 3e-21
Identities = 129/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||| | |||| || ||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgta--agtcattcaagcatttcccatattcatattgatgt 99
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | | |||||| |||||||||||||| ||| | ||||
Sbjct: 98 taatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 163 bits (82), Expect = 9e-40
Identities = 103/110 (93%)
Strand = Plus / Plus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatatat 86
||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgactt 136
|||||||||||||||||||||||||||| | |||||||||| ||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatatat 86
||||||||||| |||| |||||||||||||||||||||||||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgactt 136
||||||||||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 130/145 (89%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 4 ttactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatg 61
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| ||||||||||||||||| |||||||||||||||||||||| | ||||
Sbjct: 62 ttaatgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaa 121
Query: 122 atgctaaaatgacttacattgtgaa 146
|| || ||||||||||||||||||
Sbjct: 122 atattagaatgacttacattgtgaa 146
Score = 163 bits (82), Expect = 9e-40
Identities = 136/153 (88%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgta--agtcattctaatatttcccacattcatattgatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || | | |||||| | ||||||||||||||||||||||||||| | |||||
Sbjct: 100 taatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 163 bits (82), Expect = 9e-40
Identities = 103/110 (93%)
Strand = Plus / Minus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatatat 86
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgactt 136
|||||||||||||||||||||||||||| | |||||||||| ||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Plus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatatat 86
||||||||||| |||| |||||||||||||||||||||||||||| | | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgactt 136
| ||||||||||||||||||||||||| | |||||||||| ||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 111/121 (91%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||||||||||||||| |||||||||||| |||||||||||
Sbjct: 137 taagtcattctagcatttcccacattcatattgatattaatgaatctagatagatatata 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtga 18
Query: 146 a 146
|
Sbjct: 17 a 17
Score = 127 bits (64), Expect = 5e-29
Identities = 124/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || ||||||| | |||| |||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcatttttgcatttcccacatttatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | |||||||||||||| |||||||||||| | |||||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtga 145
||||| |||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtga 145
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/153 (88%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgta--agtcattctagcatttctcacattcatatattagt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 100 taatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| || |||||||||||||||||| || |||||
Sbjct: 40 tgatagaatgacttacattgtgaaacggaggga 8
Score = 105 bits (53), Expect = 2e-22
Identities = 122/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctatcatttcccacattcatattgatat 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||||| |||||||| | ||||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaa 122
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaa 146
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/153 (88%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgacgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||||||||||| ||||||||||||| ||||||||| ||| | |||||
Sbjct: 63 taatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
| ||||||||||||| |||||||| || |||||
Sbjct: 123 ttctaaaatgacttagattgtgaaacggaggga 155
Score = 121 bits (61), Expect = 3e-27
Identities = 124/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| || |||| |||||| |||||||||
Sbjct: 158 tactccctccgtttcacaatcta--agtcattttagaatttcccacattaatattgatgg 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||||| ||||||||||| | |||||
Sbjct: 100 taatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 149 bits (75), Expect = 1e-35
Identities = 136/154 (88%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatg 61
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| | ||| |||||| ||||||||||||||||||||||||| | ||||
Sbjct: 62 ttaatgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaa 120
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| |||||||||||||||||| || |||||
Sbjct: 121 atgctagaatgacttacattgtgaaacggaggga 154
Score = 145 bits (73), Expect = 2e-34
Identities = 128/144 (88%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 100
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||||| | || ||| || |||||||||||||||||||||||||| | |||||
Sbjct: 99 taatgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||| ||| || ||||||||||||||| ||||||| ||||||||||
Sbjct: 159 ttactccctccgtttcataatgta--agtcattctactattgttcacatccatattgatg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
||||||||||| ||||||||||||||||||||||||| |||| |||||||| | | ||
Sbjct: 101 ctaatgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaa 42
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| ||||||||||||| |||| || |||||
Sbjct: 41 atgctagaatgacttacattatgaaacggaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| ||||| ||||||||||| |||| |||||||||| | | ||||||
Sbjct: 26 taagtcattctagcattttccacattcatatcgatgccaatgaatctagacatatatatc 85
Query: 86 tgtctagattcattaacatcaatatg 111
| ||||||||||||| ||||||||||
Sbjct: 86 tatctagattcattagcatcaatatg 111
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 147 bits (74), Expect = 5e-35
Identities = 135/153 (88%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||| |||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcgcaatgta--agtcattctagcatttctcacattcatattgatgg 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||||| |||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 63 taatgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaa 121
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| || |||||||||||||||||| || |||||
Sbjct: 122 tgttagaatgacttacattgtgaaacggaggga 154
Score = 97.6 bits (49), Expect = 4e-20
Identities = 119/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| || ||| ||||| ||||
Sbjct: 157 tactccctccgtttcacaatgta--agtcattctaacatttcccatatttatattaatgt 100
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| |||| | | ||||||||||||| ||||||||||||| | ||||
Sbjct: 99 taatgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaa 41
Query: 123 tgctaaaatgacttacattg 142
||||| ||||||||||||||
Sbjct: 40 tgctagaatgacttacattg 21
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 134/153 (87%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || ||||||| || |||| |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattttagcatttcccacattcatattagtgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||||||||||||||||||||||||||||| ||||||||| | | ||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggga 155
Score = 137 bits (69), Expect = 5e-32
Identities = 126/144 (87%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||| | |||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagcattctccacattcatattaatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | |||||||||||||||| ||||||||| | |||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||
Sbjct: 40 tgctaaaatgacttacattgtgaa 17
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 127/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgttgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtgaa 146
|| | ||||||||||||| ||||
Sbjct: 123 tggtggaatgacttacattatgaa 146
Score = 131 bits (66), Expect = 3e-30
Identities = 114/130 (87%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||| || |||| |||||||||||||||| ||||||||||| | | ||||||
Sbjct: 137 taagtcattccaccatttcccacattcatattgatggtaatgaatctagacatatatatc 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
| |||||||||||||||| |||||||||| | |||||||||| |||||||||||||||||
Sbjct: 77 tatctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 145 bits (73), Expect = 2e-34
Identities = 137/157 (87%), Gaps = 6/157 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatat----tg 58
|||||||||||||||||||| || |||||||||| |||| || ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcgcatattcatacatagtg 62
Query: 59 atgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatatag 118
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgg 122
Query: 119 gaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||| |||||||||||||||||| || |||||
Sbjct: 123 gaaatgctagaatgacttacattgtgaaacggaggga 159
Score = 111 bits (56), Expect = 3e-24
Identities = 126/148 (85%), Gaps = 6/148 (4%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||| ||||||
Sbjct: 162 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatagtgatgt 105
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatca----atatgaatatag 118
||||||||||| | | |||||| | ||||||||||||||||||| |||||||||
Sbjct: 104 taatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgc 45
Query: 119 gaaatgctaaaatgacttacattgtgaa 146
||||||||| ||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 127/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| || || | |||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagcatattccgcattcatattgatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || | | ||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 100 taatgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || |||||||||| |||| | |||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgta--agtcattctagcatttcctatattcatattgatg 61
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| ||||||||| ||||||| |||||||||||||||||||||| | |
Sbjct: 62 ttaatgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaat 121
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| |||||||||||||||||| || |||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 139/159 (87%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||| |||||| || |||||||||| ||||| ||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgta--agtcattctagcattttctacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || | | ||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 63 taatgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaa 120
Query: 123 tgctaaaatgacttacattgtgaatcgaagggaatacat 161
||||| |||||||||||||||| | || ||||| |||||
Sbjct: 121 tgctagaatgacttacattgtggaacggagggagtacat 159
Score = 135 bits (68), Expect = 2e-31
Identities = 107/119 (89%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| |||||||||||||||||||||||||||| | | ||||||
Sbjct: 135 taagtcattctagcatttcccacattcatattgatgttaatgaatctagaca--tatata 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 77 tgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtg 19
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 125/142 (88%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||| |||| |||| |||||||||| |||||| || |||||||||||||
Sbjct: 5 tacttcctccgttccacagtata--agtcattctagtattttccatattcatattgatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || |||||||||||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 63 taatgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaa 122
Query: 123 tgctaaaatgacttacattgtg 144
|| || ||||||||| ||||||
Sbjct: 123 tgttagaatgacttatattgtg 144
Score = 111 bits (56), Expect = 3e-24
Identities = 116/135 (85%), Gaps = 2/135 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||| ||||||||| |||||||||| |||| ||| |||||||||||||
Sbjct: 158 tactccctccgttccacaatata--agtcattctaacatttctcatattcatattgatgc 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||||| | |||||| | |||| |||||||| ||||||||||||||| | |||
Sbjct: 100 taatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaa 41
Query: 123 tgctaaaatgactta 137
| ||| |||||||||
Sbjct: 40 tactagaatgactta 26
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||| | || |
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatacttatat 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | ||||||||||||||||||||||| |||||||||| || | ||||
Sbjct: 63 taatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||||||||||||||| || |||||
Sbjct: 123 tgctaaaatgacttacattgtgaaacggaggga 155
Score = 113 bits (57), Expect = 8e-25
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| || |||| |||||| ||||||||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattttagcatttctcacatccatattgatgc 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| ||||||||||||||| || | ||||||| | |||||
Sbjct: 100 taatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| || ||||| |||||||||||| || |
Sbjct: 5 tactccctccgtttcacaatgta--agtcattatagcattttccacattcatatttatat 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||| ||| || || |||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 63 taataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggga 155
Score = 107 bits (54), Expect = 5e-23
Identities = 129/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||| ||| ||||| || ||||||||| | | |||
Sbjct: 100 taatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctataatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 139 bits (70), Expect = 1e-32
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 45 cacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacatc 104
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||| | | |||| || |||||||||||||||||| || |||||
Sbjct: 105 aatatgaatgtggaaaatattagaatgacttacattgtgaaacggaggga 154
Score = 123 bits (62), Expect = 8e-28
Identities = 123/141 (87%), Gaps = 3/141 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||||| |||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgta--agtcattctaatattttccacattcatattgatgt 100
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | |||||||||||||| |||||||||||| | |||||
Sbjct: 99 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Query: 123 tgctaaaatgacttacattgt 143
||| ||| |||||||||||
Sbjct: 39 -actagaataacttacattgt 20
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||| || |||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcattacccatattcatatggatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | ||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct: 63 taatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggga 155
Score = 131 bits (66), Expect = 3e-30
Identities = 126/145 (86%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| |||| ||||||||||||| |||
Sbjct: 159 ttactccctccgtttcacaatgta--agtcattctagcatttctcacattcatattaatg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| | | |||||| ||||||||||||||||| |||||||||| || |
Sbjct: 101 ttaatgaatctagacatatatatccaactagattcattaacatccatatgaatatgggta 42
Query: 122 atgctaaaatgacttacattgtgaa 146
|||||| ||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| ||| ||||||||| ||| | ||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtat--gtcattctagcattgtccacattcatatagatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | ||||||| |||||||||||||||||||||||||||| | | |||
Sbjct: 63 taatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggga 155
Score = 123 bits (62), Expect = 8e-28
Identities = 125/145 (86%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| ||||| ||||||||||||||||
Sbjct: 159 ttactccctccgtttcacaatgta--agtcattctagcattttccacattcatattgatg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| | ||||||||| |||||||||||| |||| |||||||| | | |
Sbjct: 101 ttaatgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggaca 42
Query: 122 atgctaaaatgacttacattgtgaa 146
|||||| |||||| |||||||||||
Sbjct: 41 atgctagaatgacatacattgtgaa 17
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 139 bits (70), Expect = 1e-32
Identities = 94/101 (93%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 55 attgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaat 114
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatat--atgtctagattcattaacatcaatatgaat 105
Query: 115 ataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|| |||||||||||||||||||| |||||||| || |||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaacggaggga 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/107 (85%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| |||||||||||||||||| ||||||| || |||| || |||||||||||||
Sbjct: 150 ttactccctccgtttcacaatata--agtcattttagcatttcccatattcatattgatg 93
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
||||||||||| | | |||||| | |||||||||||||||||||||
Sbjct: 92 ttaatgaatct--agacatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatatagatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
| ||||||||||||| ||||| ||||||||||||||||||||| |||||||| | ||||
Sbjct: 100 tgatgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| |||||||||||||| |||||| || |||||
Sbjct: 40 tgataaaatgacttacaatgtgaaacggaggga 8
Score = 115 bits (58), Expect = 2e-25
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
||||||||| || |||| |||||||||||| |||||||||||||||| | | ||||||
Sbjct: 26 taagtcattttatcatttctcacattcatatagatgttaatgaatctagacatctatata 85
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
| | ||||||||| |||||| |||||||| | |||||||||| |||||||||||||||||
Sbjct: 86 tatttagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtga 145
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 146 aacggaggga 155
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| | | |||||||||||| |||||
Sbjct: 158 tacttcctccgtttcataatgta--agtcattctagcaatgctcacattcatatggatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| || | |||||||||||||||||||||| ||||||||||||| ||
Sbjct: 100 taatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||||||||||| |||| || |||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| |||||||||||||||| | | | | |||| |||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatagacatatatctagattcattaacatccat 108
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||| | | | ||||| ||||||||||||| ||||
Sbjct: 109 atgaatgtgagcattgctagaatgacttacattatgaa 146
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||||| |||||||| || |||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatat--aagtcattgtagcatttcccacattcatatttatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||||||||||||||||||||||||| ||||||||| ||| | |||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||| |||| |||||||| || |||||
Sbjct: 123 tgctagaatggcttatattgtgaaacggaggga 155
Score = 137 bits (69), Expect = 5e-32
Identities = 126/144 (87%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| || ||||||| |||||||||||| |||||||||
Sbjct: 158 tactccctccgtttcacaatata--agccattctagcatttttcacatttatattgatga 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||||||| ||||||||| | |||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||| ||||||||
Sbjct: 40 tgctacaatgacttatattgtgaa 17
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||| || ||||||| || |||| |||||| ||||||||||
Sbjct: 158 tacttcctccgtttcacaaagta--agtcattttagcatttcccacatttatattgatgt 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||||| |||||||||||||||||| ||||||||||| ||| | |||||
Sbjct: 100 taatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||| |||||||||||| ||||||| || |||||
Sbjct: 40 tgcaaaaatgacttactttgtgaaacggaggga 8
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
|||||| ||||||||||| ||||||||| | | |||| | | ||||||||||||||||||
Sbjct: 46 cacatttatattgatgtttatgaatctagacatatatttctatctagattcattaacatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||| ||| | ||||||||||||||||||||| |||||||
Sbjct: 106 aatataaatgtgggaaatgctaaaatgacttactttgtgaa 146
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 53 atattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatga 112
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 113 atataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|| | |||||| ||| |||| ||||||||||||| || |||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggaggga 155
Score = 107 bits (54), Expect = 5e-23
Identities = 129/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || || ||||||| ||||| ||||||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgta--agacattctagtatttcccacattcatattgatat 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||| | ||||||||||||||||||||||| || | |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
| ||| |||||||||||||||||| || |||||
Sbjct: 40 tactagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||| ||| || |||||||||| |||||||||||| ||||| ||||
Sbjct: 159 ttactccctccgtttcataatgta--agtcattctagtatttttcacatccatatcgatg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
||||||||||| ||| ||||||||||||||||||||| |||| |||||||| | | ||
Sbjct: 101 ctaatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaa 42
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| ||||||||||||| |||| || |||||
Sbjct: 41 atgctagaatgacttacattatgaaacggaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 107/130 (82%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| ||||| ||||||||||| |||| |||||||||| | | ||||||
Sbjct: 26 taagtcattctagcattttccacattcatatcgatgccaatgaatctagacatatatatt 85
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
| ||||||||||||| |||| ||||| || | |||| ||| ||||||||||||| |||
Sbjct: 86 tatctagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatga 145
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 146 aacggaggga 155
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 133 bits (67), Expect = 8e-31
Identities = 132/153 (86%), Gaps = 8/153 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||||| | |||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 63 taatgaatct------agatatatgtctagattcattagcatcaatatgaatgtaggaaa 116
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||||||| |||||||| || |||||
Sbjct: 117 tgctagaatgacttatattgtgaaacggaggga 149
Score = 113 bits (57), Expect = 8e-25
Identities = 124/144 (86%), Gaps = 8/144 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| |||| |||||||||||||||
Sbjct: 152 tactccctccgtttcacaatata--agtcattctagcatttcctacattcatattgatgc 95
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| || |||||| |||||||||||| ||||||||||||| | |||||
Sbjct: 94 taatgaatcta----gacatatat--ctagattcattagcatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| | | |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgta--agtcattctagcaatgctcacattcatatggatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| || | ||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 63 taatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||||||||||| |||| || |||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggga 155
Score = 83.8 bits (42), Expect = 7e-16
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| |||||||||||||||| ||| | | |||| |||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagatatagacatatatctagattcattaacatccat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||| | | | ||||| ||||||||||||| ||||
Sbjct: 54 atgaatgtgagcattgctagaatgacttacattatgaa 17
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 107/120 (89%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatatat 86
|||||||| || ||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 134 aagtcattttagcatttttcacattcatatagatgttaatgaatcta--tgcatatatat 77
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||| |||||||||||||| | |||||| | |||||||||||||||||||||||||||||
Sbjct: 76 gtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaa 17
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/153 (83%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || ||||||| || |||| ||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattttagcatttcccacattcatgtagatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||| || | ||||||||| |||||||||||||||| |||||||| | |||
Sbjct: 63 taatgaatc--aagacatatatatgcatagattcattaacatctatatgaatgtgaaaaa 120
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||||| |||| |||| || |||||
Sbjct: 121 tgctaaaatgacttgcattatgaaacggaggga 153
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 123 bits (62), Expect = 8e-28
Identities = 125/144 (86%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||||||||||||||| | ||||
Sbjct: 156 tactccctccgtttcacaatgta--agtcattctagcatttttcacattcatactcatgt 99
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||| |||||||||||| |||||||||||| | ||||||| | |||||
Sbjct: 98 taatgaatctagata--tatatatgtctaaattcattaacatgagtatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||| | ||||||||| ||||||||
Sbjct: 40 tgccagaatgacttatattgtgaa 17
Score = 103 bits (52), Expect = 7e-22
Identities = 133/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| ||||||||| |||| |||||||||| | ||||
Sbjct: 5 tacttcctccgtttcacaatata--agtcattctggcatttcccacattcatactcatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || | | |||||||| |||||||||||||||| | ||||||| | |||
Sbjct: 63 taatgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaa 120
Query: 123 tgctaaaatgacttacattgtgaatcgaagggaataca 160
||||| |||||||||||||||||| || ||||| ||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggagggagtaca 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 131/153 (85%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| ||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgta--agtcattctagcattttccacattcatatagatgc 101
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| |||| | |||||| || ||||||||||| |||| |||||||||||| |||
Sbjct: 100 taatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| || |||||||||||||||||| || |||||
Sbjct: 40 tgttagaatgacttacattgtgaaacggaggga 8
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/153 (83%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| | |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctaacattttctatattcatatagatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | |||||||||| || |||||||| |||| |||||||| | | |||
Sbjct: 63 taatgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||||||||||| | |||||||||||||| ||| ||||| |
Sbjct: 26 taagtcattctaacatttcccacattcatataggtgttaatgaatctagatatatataga 85
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||||||||||||||| | |||||||| | | |||||||| |||||||||||||||||
Sbjct: 86 tgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtga 145
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 146 aacggaggga 155
Score = 113 bits (57), Expect = 8e-25
Identities = 120/140 (85%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| ||||| ||||||||||| | ||
Sbjct: 159 ttactccctccgtttcacaatgta--agtcattctagcattttccacattcatataggtg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| | | ||||||| |||||||||||||||| | |||||||| | ||||
Sbjct: 101 ttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaa 42
Query: 122 atgctaaaatgacttacatt 141
||| || |||||||||||||
Sbjct: 41 atgttagaatgacttacatt 22
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 123 bits (62), Expect = 8e-28
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 68 aatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaatgcta 127
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 128 aaatgacttacattgtgaatcgaagggaatacat 161
||||||||||||| |||| || ||||| |||||
Sbjct: 35 gaatgacttacattatgaaacggagggagtacat 2
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||| ||||||||||||||||||||||||| | | ||||||
Sbjct: 26 taagtcattctagcatttctcatattcatattgatgttaatgaatctagacatatatatc 85
Query: 86 tgtctagatt 95
| ||||||||
Sbjct: 86 tatctagatt 95
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 11/153 (7%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| || || ||||||||||||||||||||||||||| | |||||
Sbjct: 63 taatgaatcta----gacat-----tctagattcattaacatcaatatgaatgtgggaaa 113
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 114 tgctagaatgacttacattgtgaaacggaggga 146
Score = 121 bits (61), Expect = 3e-27
Identities = 123/144 (85%), Gaps = 11/144 (7%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 92
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | |||||||||||||||||||||||||||||| | |||||
Sbjct: 91 taatgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 121 bits (61), Expect = 3e-27
Identities = 132/154 (85%), Gaps = 5/154 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatat--aagtcattctagtatttcccacattcatattgata 61
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
||||||||||| ||||||||| |||||||| |||| ||||||||||||| | ||||
Sbjct: 62 ctaatgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaa 118
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
||| | ||||||||||||| |||| || |||||
Sbjct: 119 atggtggaatgacttacattatgaaacggaggga 152
Score = 69.9 bits (35), Expect = 1e-11
Identities = 100/121 (82%), Gaps = 3/121 (2%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||| || |||| |||||||||||||||| |||| ||||| | |||||
Sbjct: 134 taagtcattccaccatttcccacattcatattgatgccaatggatctagac---tatatc 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
| ||||||||||||| |||||||||||| | |||||| ||| ||||||||| |||||||
Sbjct: 77 tatctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtga 18
Query: 146 a 146
|
Sbjct: 17 a 17
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 135/158 (85%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| |||||||||| |||| ||| || ||||||||||
Sbjct: 156 tacttcctccgtttcacaatata--agtcattctagcatttcccacgtttatattgatgt 99
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||||| | | || ||| |||||||||||||||||||||||||| | |||||
Sbjct: 98 taatgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaagggaataca 160
||||| |||||||||||||||||| || ||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagtaca 3
Score = 115 bits (58), Expect = 2e-25
Identities = 124/144 (86%), Gaps = 4/144 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| |||| |||| ||| |||||||||||||||||||| || | |||||
Sbjct: 63 taatgaatctagataggcatat--gtccagattcattaacatcaatataaacgtgggaaa 120
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||| ||||||||
Sbjct: 121 tgctagaatgacttatattgtgaa 144
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 115 bits (58), Expect = 2e-25
Identities = 123/144 (85%), Gaps = 8/144 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattttccacattcatatcgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||| | || ||||||| |||||||||||| |||||||||||||||| | |||
Sbjct: 63 taatgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaa 116
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 117 tgctagaatgacttacattgtgaa 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 125/153 (81%), Gaps = 8/153 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| || ||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgta--agtcattctagcattttccatattcatattgatgt 95
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||| | | || ||| | |||| | ||||||||||| |||||||| | | |||
Sbjct: 94 ------atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 128/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaatg 67
||||||||||||||| || |||||||||| |||| |||||||||||||||||| ||||
Sbjct: 153 cctccgtttcacaatgta--agtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 68 aatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaatgcta 127
|||||| | | |||| |||||||||||||| | ||||||||||| | || ||||||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 128 aaatgacttacattgtgaatcgaagggaata 158
|||||||||||||||||| || ||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggaata 5
Score = 109 bits (55), Expect = 1e-23
Identities = 125/148 (84%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaatg 67
||||||||||||||| || |||||||||| || | ||||||||||||||| | ||
Sbjct: 10 cctccgtttcacaatgta--agtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 68 aatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaatgcta 127
|||||| | | | ||||||||||||||||||| |||||||||||||| | |||||||||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 128 aaatgacttacattgtgaatcgaaggga 155
|||||||||||||||||| || |||||
Sbjct: 128 gaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 121/144 (84%), Gaps = 14/144 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgta--agtcattctagcattttccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| ||||||| ||||||||||||||||||||| | |||||
Sbjct: 63 taatgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaa 110
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 111 tgctagaatgacttacattgtgaa 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||| | | |||||||| ||||||||||||| ||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaa 17
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||| ||||||||||| ||| || |||||||||| |||| | |||||||| ||
Sbjct: 3 cttactccctccgtttcataatgta--agtcattctagcatttcctatattcatatagag 60
Query: 61 gttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatatagga 120
|||| |||||||| ||||||||||||||||||||||| |||| || |||||||| | |||
Sbjct: 61 gttagtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtggga 120
Query: 121 aatgctaaaatgacttacattgtgaatcgaaggga 155
||||||| ||||||||||||| |||| || |||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggaggga 155
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/130 (84%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||||||||||| || |||| |||||||| | | ||||||
Sbjct: 137 taagtcattctagcatttcccacattcatatggaggttagtgaatctagacatatatatc 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
| | |||||||| |||| || ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 77 tatatagattcactaacctctatatgaatataggaaatgctagaatgacttacattatga 18
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||| ||| || |||| ||||| |||| ||||||||||| |||
Sbjct: 3 cttacttcctccgtttcataatgta--agtctttctagtattgcccacattcatatagat 60
Query: 61 gttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatatagga 120
||||||||||||| | | |||||| |||||||||||||||||||| |||||||||| |
Sbjct: 61 gttaatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagc 120
Query: 121 aatgctaaaatgacttacattgtgaatcgaaggga 155
||||||| || | |||||||| |||| || |||||
Sbjct: 121 aatgctagaaagtcttacattatgaaacggaggga 155
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| |||||||||||||||| | | ||||||||||||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacatatatatgtctagattcattaacatctat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||| | || ||| ||| || |||||||||| ||||
Sbjct: 54 atgaatgtgggcaatactagaaagacttacattatgaa 17
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 80 tatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttaca 139
||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 140 ttgtgaa 146
|||||||
Sbjct: 23 ttgtgaa 17
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||| || || |||||||| ||||||||||||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaa 128
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 52 catattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatg 111
||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| | |||
Sbjct: 111 catatggatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatg 52
Query: 112 aatataggaaatgctaaaatgacttacattgtgaa 146
||||| || ||||||| || | |||||||||||||
Sbjct: 51 aatatgggcaatgctagaaagtcttacattgtgaa 17
Score = 48.1 bits (24), Expect = 4e-05
Identities = 90/111 (81%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||||||| || || | ||||| ||| || |||||| | |||
Sbjct: 3 cttacttcctccgtttcacaatgta--agactttctagcattgcccatattcatttagat 60
Query: 61 gttaatgaatctaaatagatatatatgtctagattcattaacatcaatatg 111
||||||||||||| | | || ||| | | |||||||||||||||| |||||
Sbjct: 61 gttaatgaatctagacatatgtatgtatttagattcattaacatccatatg 111
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 129/153 (84%), Gaps = 8/153 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctatcatttcccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||||| | | | |||||||||||||| |||||||||||||| | |||||
Sbjct: 63 caatgaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaa 116
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||||||||||| |||| || |||||
Sbjct: 117 tgctagaatgacttacattatgaaacggaggga 149
Score = 99.6 bits (50), Expect = 1e-20
Identities = 103/121 (85%), Gaps = 6/121 (4%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||||||||||||||||| |||||||||| | ||||
Sbjct: 131 taagtcattctagcatttcccacattcatattgatgtcaatgaatctagacagat----- 77
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||||| |||||||||||||| | ||||||| || |||||||||||||||||
Sbjct: 76 -gtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtga 18
Query: 146 a 146
|
Sbjct: 17 a 17
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 127 aacggaggga 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| || ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgta--agtcattctagcatttcccatattcatattgatgt 82
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 81 taatgaatcta 71
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||| |||||||||| ||||||||||||| ||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaa 17
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 129/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| ||| ||||| ||||| |||||
Sbjct: 5 tacttcctccgtttcataatgta--agtcattctagcattgcccacatacatatagatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || ||| | || | |||||||||||||||||||| |||||||||| || ||
Sbjct: 63 taatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaa 122
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||||||||||| |||| || |||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggga 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| |||||||||||||||| | | | || ||| |||| ||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
||| || | || ||||||| ||||||||||||| ||||
Sbjct: 54 atgtatgtgggcaatgctagaatgacttacattatgaa 17
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 17 aacggaggga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccatattcatattgatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||| |||||||||| ||||||||||||| ||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaa 127
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 107 bits (54), Expect = 5e-23
Identities = 122/144 (84%), Gaps = 8/144 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgta--agtcattctagccttttccacattcatattgatgt 95
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||| | || ||||||| |||||||||||| |||||||||||||| | | |||
Sbjct: 94 taatgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaa 17
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/153 (82%), Gaps = 8/153 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcattttccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||| | | || ||| | |||| | |||||||||||||||||||| | | |||
Sbjct: 63 ------atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaa 116
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|||| |||||||||||||||||| || |||||
Sbjct: 117 ggctagaatgacttacattgtgaaacggaggga 149
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 82 tatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacatt 141
||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 142 gtgaa 146
|||||
Sbjct: 21 gtgaa 17
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatc 58
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||| ||| ||||||| || | |||||||| ||||
Sbjct: 57 tatatgaatgtagacaatgctagaaagtcttacattatgaa 17
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 47 acattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatca 106
|||||||||| |||||||||||||||| | | |||| | ||| ||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatct 106
Query: 107 atatgaat 114
||||||||
Sbjct: 107 atatgaat 114
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaa 128
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| | ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattttctatattcatattgatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||| |||||||| || ||||||||| ||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaa 126
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 52 catattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatg 111
||||| || ||||||||||||||| | ||| ||||||||||||||||||||||| | |||
Sbjct: 52 catatagacgttaatgaatctaaacacatacatatgtctagattcattaacatctaaatg 111
Query: 112 aatataggaaatgctaaaatgacttacattgtgaa 146
||||| || |||||||||| | |||||||||||||
Sbjct: 112 aatatgggcaatgctaaaaagtcttacattgtgaa 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||| | |||||||||||||||| | | || ||| ||| ||||||||||||| || ||
Sbjct: 114 attcatttagatgttaatgaatctagacatatgtatgtgtttagattcattaacgtctat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||| |||| | ||||||| || | ||||||||||||| || |||||
Sbjct: 54 atgtatatgagcaatgctagaaagtcttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 101 bits (51), Expect = 3e-21
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||||| ||||||||||| ||||| ||| ||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatat--aagtcattctagtatttctcatatttatattgatga 62
Query: 63 taatgaatctaaatagatatatatgt 88
||||||||||| ||||||||||||||
Sbjct: 63 taatgaatctagatagatatatatgt 88
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttac 138
|||||| | ||||||||||||| ||||||||| ||||| ||||| ||| |||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 139 attgtgaa 146
||||||||
Sbjct: 24 attgtgaa 17
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 119 gaaatgctaaaatgacttacattgtgaatcgaagggaatacat 161
||||||||| ||||||||||||| |||| || ||||| |||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagtacat 131
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 80 tatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttaca 139
|||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 140 ttgtgaa 146
|||||||
Sbjct: 118 ttgtgaa 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| | ||||||| || |||| || ||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgca--agtcattttagcatttcccatattcatattgatgt 79
Query: 63 taatgaatcta 73
|||| ||||||
Sbjct: 78 taataaatcta 68
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 99.6 bits (50), Expect = 1e-20
Identities = 102/121 (84%), Gaps = 10/121 (8%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||||||||||||||||||||||||| |||||
Sbjct: 127 taagtcattctagcatttcccacattcatattgatgttaatgaat----------atata 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||
Sbjct: 77 tgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtga 18
Query: 146 a 146
|
Sbjct: 17 a 17
Score = 97.6 bits (49), Expect = 4e-20
Identities = 121/144 (84%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||| ||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacatttatattaatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| || |||||| |||||||||||||||||||||| | |||||
Sbjct: 63 taatgaatcta----gacatatat------attcattaacatcaatatgaatgtgggaaa 112
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 113 tgctagaatgacttacattgtgaa 136
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 147 tcgaaggga 155
|| |||||
Sbjct: 134 acggaggga 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| ||||| || |||||||||||||
Sbjct: 146 ttactccctccgtttcacaatgta--agtcattctagcattttccatattcatattgatg 89
Query: 62 ttaatgaatcta 73
||||||||||||
Sbjct: 88 ttaatgaatcta 77
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 82 tatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacatt 141
||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 142 gtgaa 146
|||||
Sbjct: 21 gtgaa 17
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||| | | |||||||||||||||||| |||||||| || |||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggaggga 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||| || ||||||||| || |||| ||| ||| |||||||||
Sbjct: 5 tacttcctccgtttcaca--atgtaagtcattttagcatttctcatatttatattgatgc 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
|||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||
Sbjct: 131 ttacttcctccgtttcacaatata--agtcattttagtattttccacattcatattgatg 74
Query: 62 ttaatgaatcta 73
||||||||||||
Sbjct: 73 ttaatgaatcta 62
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||| | | |||| ||||||||||||| ||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaa 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||||| | | |||| | |||||||||||||||||||| || |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggaggga 8
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| | |||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatata--agtcattctagcatttctcacattcatattgatgt 70
Query: 63 taatgaatctaaatag 78
||||||||||| ||||
Sbjct: 69 taatgaatctagatag 54
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaa 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 119 gaaatgctaaaatgacttacattgtgaa 146
||||||||| ||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 148 cgaaggga 155
|| |||||
Sbjct: 113 cggaggga 120
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatcta 73
|||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 102 taagtcattctagcatttcctacattcatattgatgttaatgaatcta 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 120 aaatgctaaaatgacttacattgtgaa 146
|||||||| ||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 52 catattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatg 111
||||| |||||||||||||||| ||| | | |||||| ||||||||||| |||| |||||
Sbjct: 52 catatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatg 111
Query: 112 aatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||| | || ||||||||||||||||||||| |||| || |||||
Sbjct: 112 aatgtgggcaatgctaaaatgacttacattatgaaacggaggga 155
Score = 89.7 bits (45), Expect = 1e-17
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||| ||||||||||||| | || | ||| ||||||||||||||||||
Sbjct: 117 cacattcatatagatggtaatgaatctaaacatatgtctatatctagattcattaacatc 58
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||| |||| || || |||| ||||||||||||| ||||
Sbjct: 57 tatatgcatatgggtaaggctagaatgacttacattatgaa 17
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||| ||| || |||||||||| ||| ||||| |||| |||
Sbjct: 160 cttacttcctccgtttcataatgta--agtcattctagcattgcccacatatatatagat 103
Query: 61 gttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatatagga 120
|||||||||| || ||| | || | |||||||||||||||||||| |||||||| | ||
Sbjct: 102 gttaatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggt 43
Query: 121 aatgctaaaatgacttacattgtgaatcgaaggga 155
||||||| ||||||||||||| |||| || |||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggga 8
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 47 acattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatca 106
|||||||||| |||||||||||||||| | | | || ||| |||| |||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatct 106
Query: 107 atatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||| || | || ||||||| ||||||||||||| ||||
Sbjct: 107 atatatatgtgggcaatgctagaatgacttacattatgaa 146
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttac 138
|||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 139 attgtgaa 146
||||||||
Sbjct: 113 attgtgaa 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 4 acttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgtt 63
|||||||||||||||||||||| ||||||| || ||||| | ||||||||||||| |
Sbjct: 131 acttcctccgtttcacaatata--agtcattttagcattttccgtattcatattgatgat 74
Query: 64 aatgaatcta 73
||||||||||
Sbjct: 73 aatgaatcta 64
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaa 146
|||||||||| ||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| |||||||||||| ||| ||| ||| ||||||||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctat 108
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||| | | ||| |||||| | ||||||||||||| || |||||
Sbjct: 109 atgaatgtggacaatcctaaaaagtcttacattgtgaaacggaggga 155
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | | || ||||| ||||| ||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatc 58
Query: 106 aatatgaatat 116
||||||||||
Sbjct: 57 tatatgaatat 47
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 45 tcacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 104
|||||||||||| |||||||||||||||| | | | |||||| |||||||||||||||||
Sbjct: 45 tcacattcatatagatgttaatgaatctagacacacatatatatctagattcattaacat 104
Query: 105 caatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
| || ||||| | || |||| ||||| | ||||||||||||| || |||||
Sbjct: 105 ctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggaggga 155
Score = 83.8 bits (42), Expect = 7e-16
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
|||||||| || |||||||||||||||| ||| |||| | ||||||||||||||||||||
Sbjct: 117 cacattcacatagatgttaatgaatctagatatatatgtgtgtctagattcattaacatc 58
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||| | | ||||||| | | ||||||||||||| || |||||
Sbjct: 57 tatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 93.7 bits (47), Expect = 7e-19
Identities = 120/144 (83%), Gaps = 9/144 (6%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatat--aagtcattctattatttcccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||| ||| || || || || ||||||||||||||||| ||| | |||||
Sbjct: 63 taatgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaa 115
Query: 123 tgctaaaatgacttacattgtgaa 146
| ||| ||||||||||||||||||
Sbjct: 116 tactagaatgacttacattgtgaa 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/153 (83%), Gaps = 9/153 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| |||||| ||||||||||
Sbjct: 151 tacttcctccgtttcacaatgta--agtcattctagtatttcccacatttatattgatgt 94
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||| || || ||| ||| ||| ||||||||||||||||||||| | |||||
Sbjct: 93 taatgaaacttaa-----atagatg--tagtttcattaacatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
| || ||||||||| |||||||| || |||||
Sbjct: 40 taatagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| |||||||||||| ||| ||| ||| ||||||||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||| | | ||| |||||| | ||||||||||||| || |||||
Sbjct: 54 atgaatgtggacaatcctaaaaagtcttacattgtgaaacggaggga 8
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | | || ||||| ||||| ||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatc 105
Query: 106 aatatgaatat 116
||||||||||
Sbjct: 106 tatatgaatat 116
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 122
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || ||||||| || |||| |||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgta--agtcattttagcatttcccacattcatattgatgt 77
Query: 63 taatgaatc 71
|||||||||
Sbjct: 76 taatgaatc 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| | | |||||| ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | | |||| | ||||||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatc 58
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagggaataca 160
|||||||| | | |||||||||| | |||||||| |||| || ||||| ||||
Sbjct: 57 tatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagtaca 3
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 45 tcacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 104
|||||||||||| |||||||||||||||| | | | |||||| |||||||||||||||||
Sbjct: 45 tcacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacat 104
Query: 105 caatatgaatataggaaatgctaaaatgacttacattgtgaa 146
| |||||||| | || ||||||| || | |||||||| ||||
Sbjct: 105 ctatatgaatgtgggcaatgctagaaagtcttacattatgaa 146
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 80 tatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttaca 139
|||||||||||||||||||||| || ||||||||| | |||||||||| |||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 140 ttgtgaa 146
|||||||
Sbjct: 117 ttgtgaa 123
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||| || |
Sbjct: 135 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatatttatat 78
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 77 taatgaatcta 67
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | | |||| | ||||||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagggaataca 160
|||||||| | | |||||||||| | |||||||| |||| || ||||| ||||
Sbjct: 106 tatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagtaca 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 45 tcacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 104
|||||||||||| |||||||||||||||| | | | |||||| |||||||||||||||||
Sbjct: 118 tcacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacat 59
Query: 105 caatatgaatataggaaatgctaaaatgacttacattgtgaa 146
| |||||||| | || ||||||| || | |||||||| ||||
Sbjct: 58 ctatatgaatgtgggcaatgctagaaagtcttacattatgaa 17
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
|||||| ||||||||||||||||||||||||| | |||||||||| ||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 143 tgaatcgaagggaatacat 161
|||| || ||||| |||||
Sbjct: 125 tgaaacggagggagtacat 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatata--agtcattctagcatttcccacattcatattgatgt 83
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||| ||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
|||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 141 tgtgaa 146
| ||||
Sbjct: 112 tatgaa 117
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| |||| |||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgta--agtcattctagcatttcccacattcatattgatgt 72
Query: 63 taatgaatcta 73
||||| |||||
Sbjct: 71 taatggatcta 61
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 89 ctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 17
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||||||| || ||||||| || |||| |||||||||||||||
Sbjct: 3 cttacttcctccgtttcacaatgta--agtcattttagcatttcccacattcatattgat 60
Query: 61 gttaatgaatcta 73
| |||||||||||
Sbjct: 61 gctaatgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 96 cattaacatcaatatgaatataggaaatgctaaa-atgacttacattgtgaatcgaaggg 154
||||| ||||||||||||| | |||||||||||| ||||||||||||||||| || ||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 155 a 155
|
Sbjct: 140 a 140
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 99/119 (83%), Gaps = 12/119 (10%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
||||||||| ||| |||| |||||||||||||||||||||||||||| ||
Sbjct: 26 taagtcattttaccatttcccacattcatattgatgttaatgaatctagat--------- 76
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 77 ---ctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtg 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||| ||||||||| |||||||||| |||| | ||||||||||||||
Sbjct: 146 tacttcctccgttccacaatata--agtcattctagcatttactatattcatattgatgt 89
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| || |||||||||||||||||||||||||| | |||||
Sbjct: 88 taatgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| |||||||||||||||| |||| || |||||
Sbjct: 40 tggtaaaatgacttacattatgaaacggaggga 8
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 117/142 (82%), Gaps = 14/142 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattttccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||| ||||| ||| ||||| ||||||||||||||||||| | |||||
Sbjct: 63 taatgtatctagata------------tagatacattaacatcaatatgaatgtgggaaa 110
Query: 123 tgctaaaatgacttacattgtg 144
||||| ||||||||||||||||
Sbjct: 111 tgctagaatgacttacattgtg 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||| |||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgta--agtcattctagcatttcccacattcatattgatgt 89
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||| ||||| || |||||| ||||||||||||||||||| | | |||
Sbjct: 88 taatgtatctatat------------ctagatacattaacatcaatatgaatgtggaaaa 41
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaa 102
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgta--agtcattctagcatttcctacattcatattgatgt 57
Query: 63 taatgaat 70
||||||||
Sbjct: 56 taatgaat 49
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||| | |||||||||| |||||||||||||||||| || |||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 89 ctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||||||| || ||||||| || |||| |||||||||||||||
Sbjct: 145 cttacttcctccgtttcacaatgta--agtcattttagcatttcccacattcatattgat 88
Query: 61 gttaatgaatcta 73
| |||||||||||
Sbjct: 87 gctaatgaatcta 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 96 cattaacatcaatatgaatataggaaatgctaaa-atgacttacattgtgaatcgaaggg 154
||||| ||||||||||||| | |||||||||||| ||||||||||||||||| || ||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 155 a 155
|
Sbjct: 8 a 8
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 99/119 (83%), Gaps = 12/119 (10%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
||||||||| ||| |||| |||||||||||||||||||||||||||| ||
Sbjct: 125 taagtcattttaccatttcccacattcatattgatgttaatgaatctagat--------- 75
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 74 ---ctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtg 19
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||| ||||||||| |||||||||| |||| | ||||||||||||||
Sbjct: 5 tacttcctccgttccacaatata--agtcattctagcatttactatattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| || |||||||||||||||||||||||||| | |||||
Sbjct: 63 taatgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaa 110
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
|| |||||||||||||||| |||| || |||||
Sbjct: 111 tggtaaaatgacttacattatgaaacggaggga 143
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 135 aacggaggga 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| || ||||| ||||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgta--agtcattttagtatttctcacattcatattgatgt 90
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 89 taatgaatcta 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| ||| | |||| ||||||||||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaa 17
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||| | |||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 46 cacattcatttagatgttaatgaatctaaacacatatatatgtctagattcattaacatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|| | | ||||| |||| || || | ||||||||||||| || |||||
Sbjct: 106 tatgggtacataggcaatgttagaaagtcttacattgtgaaacggaggga 155
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 58 gatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatata 117
|||||||||||||||| | | |||||| ||| |||||||||||||||| | |||||| |
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 118 ggaaatgcta 127
|| |||||||
Sbjct: 45 ggtaatgcta 36
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||| ||||||||||||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgta--agtcattctagcatttctcacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||||||||| |||||||| ||||| | |||
Sbjct: 63 taatgaatctaga------------tgtagattcattaatatcaatataaatatggaaaa 110
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 111 tgctagaatgacttacattgtgaaacggaggga 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 146 a 146
|
Sbjct: 17 a 17
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 62
Query: 63 taatgaatcta 73
||||||||||
Sbjct: 63 caatgaatcta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 aacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||||| | |||||||||| ||||||||||||| |||| || |||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggga 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgtt 63
|||||||||||| |||| ||||||||||||||||||
Sbjct: 114 taagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||| ||||||||||||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgta--agtcattctagcatttctcacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | | |||||||||||| |||||||| ||||| | |||
Sbjct: 63 taatgaatctaga------------tgtagattcattaatatcaatataaatatggaaaa 110
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||||||||||| || |||||
Sbjct: 111 tgctataatgacttacattgtgaaacggaggga 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/144 (84%), Gaps = 8/144 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| ||||||| || ||||| |||||| |||||||||
Sbjct: 152 tactccctccgtttcacaatata--agtcattttagcattttccacatttatattgatgc 95
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | ||||||| ||| |||||||| ||||||| | ||| | ||||
Sbjct: 94 taatgaatctaga--gatatat----ctaaattcattagcatcaatgtaaatgtgagaaa 41
Query: 123 tgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||
Sbjct: 40 tgctaaaatgacttacattgtgaa 17
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/153 (82%), Gaps = 8/153 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || ||||||| || |||| ||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattttagcatttctcacatttacattgatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
|||||||| || ||| ||| ||||||||||||| ||||||||| ||| | | |||
Sbjct: 63 taatgaatttagata------tatctctagattcattagcatcaatataaatgtggaaaa 116
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||||| |||||||| || |||||
Sbjct: 117 tgctaaaatgacttatattgtgaaacggaggga 149
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/64 (89%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||| |||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatat--aagtcattatagcattttccacattcatattgatgt 58
Query: 63 taat 66
||||
Sbjct: 59 taat 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatcta 73
|||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 109 taagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||| | | |||||||| ||||||||| ||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaa 13
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | | ||||||||||||||||||||| |||||
Sbjct: 22 cacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatc 81
Query: 106 aatatgaat 114
||||||||
Sbjct: 82 tatatgaat 90
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||| |||||||||| | | |||||| ||||||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 106 aatatgaat 114
||||||||
Sbjct: 33 tatatgaat 25
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/80 (90%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || || ||||||| |||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgta--agccattctatcatttttcacattcatattgatgt 73
Query: 63 taatgaatctaaatagatat 82
||||||||||| ||||||||
Sbjct: 72 taatgaatctagatagatat 53
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaat 114
|||||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgaat 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/55 (87%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatat 56
||||| ||||||||||||| ||||||||||||||| |||| |||||||||||
Sbjct: 4 ttactccctccgtttcaca--atataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatata--agtcattctagcattttccacattcatattgatgt 83
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
|||||| ||||||||||||||||||||||||| | | |||||||| ||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 143 tgaatcgaagggaatacat 161
|||| || ||||| |||||
Sbjct: 125 tgaaacggagggagtacat 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||| ||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattaatgt 62
Query: 63 taat 66
||||
Sbjct: 63 taat 66
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 87.7 bits (44), Expect = 4e-17
Identities = 120/144 (83%), Gaps = 11/144 (7%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgta--agtcattctagcattttccacattcatattgatgt 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | || | ||| ||||||||||||||||||||| | ||||
Sbjct: 63 taatgaatctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaa 113
Query: 123 tgctaaaatgacttacattgtgaa 146
||||| ||||||||||||||||||
Sbjct: 114 tgctagaatgacttacattgtgaa 137
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||||| | | |||||||| ||||||||||||| ||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaa 17
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
|||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||
Sbjct: 136 ttacttcctccgtttcacaatata--agtcattctagcatttctcacattcatattgatg 79
Query: 62 ttaatgaatct 72
||||||||||
Sbjct: 78 ctaatgaatct 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 91 agattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||| ||||||||||||| | ||||||||| ||||||||| ||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaa 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 tcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||| ||||||||||||| | ||||||||| |||||||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaa 17
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatga 68
|||||||||||| |||| ||||||||||||||||| ||||||
Sbjct: 26 taagtcattctagcatttctcacattcatattgatgctaatga 68
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || ||||||| || ||||||||| | ||||||||||
Sbjct: 131 ttacttcctccgtttcacaatgta--agtcattttagcatttttcacgtacatattgatg 74
Query: 62 ttaatgaatctaaatagatatatatgt 88
|||||||||||| ||||||||| ||||
Sbjct: 73 ttaatgaatctagatagatataaatgt 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaa 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaagggaatacat 161
|||||| ||||||||||||||||||| || || ||||| |||||
Sbjct: 45 ggaaatactaaaatgacttacattgttaaacggagggagtacat 2
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
|||||| ||||||||||||||||||||||||| | ||||||| || ||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 143 tgaa 146
||||
Sbjct: 20 tgaa 17
Score = 79.8 bits (40), Expect = 1e-14
Identities = 113/138 (81%), Gaps = 17/138 (12%)
Strand = Plus / Plus
Query: 9 ctccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaatga 68
|||||||||||||| || |||||||||| |||| |||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgta--agtcattctaacatttcccacattcatattgatgttaatga 68
Query: 69 atctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaatgctaa 128
|||||| | || ||||||||||||||||||||||||| ||||||||
Sbjct: 69 atctaa--------acatatctagattcattaacatcaatatga-------aaatgctag 113
Query: 129 aatgacttacattgtgaa 146
||||||||||||||||||
Sbjct: 114 aatgacttacattgtgaa 131
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| ||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgta--agtcattctagtatttctcacattcatattgatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
|||| ||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 141 tgtgaa 146
| ||||
Sbjct: 22 tatgaa 17
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||||||||||||||||| | | |||||||| ||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattttccacattcatattgatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 85 atgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaa 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||| || |||| ||||||| |||| |||||||||||||||||
Sbjct: 132 tacttcctccgtttcaca--atgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 148 cgaaggga 155
|| |||||
Sbjct: 126 cggaggga 133
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||| ||||||||||||||| || |||||||||| |||| |||||||||||||||
Sbjct: 138 cttactccctccgtttcacaatgta--agtcattctaacatttcccacattcatattgat 81
Query: 61 gttaatgaatctaaatagatat 82
||||||||||||| ||||||||
Sbjct: 80 gttaatgaatctagatagatat 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/58 (86%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||| || |||||||||||| |||| || ||||||||||||
Sbjct: 5 tacttcctccgtttcaca--atgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatata--agtcattctaacattttccacattcatattgatgt 82
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 81 taatgaatcta 71
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacatt 141
||||||||||||||||||||||||||||||||| | | ||||| || ||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 142 gtgaa 146
||||
Sbjct: 123 atgaa 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgtta 64
|||||||||||| |||||||||||| || |||||||||
Sbjct: 26 taagtcattctagcatttttcacatttatgttgatgtta 64
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || || | ||||| ||| |||||| ||||| ||||
Sbjct: 159 ttacttcctccgtttcacaatgta--agactttctagcattgctcacatacatatagatg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||||| | || ||||||||| ||||||||||||| | |||||| |||| |
Sbjct: 101 ttaatgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggca 42
Query: 122 atgctaaaatgacttacattgt 143
|| ||||| | ||||||||||
Sbjct: 41 atattaaaaagtcttacattgt 20
Score = 48.1 bits (24), Expect = 4e-05
Identities = 81/100 (81%)
Strand = Plus / Plus
Query: 47 acattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatca 106
|||||||| | ||||||||||||| || | | || || ||| ||||||||||||||||
Sbjct: 47 acattcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatct 106
Query: 107 atatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||| || | | ||||||| || | |||||||||||||
Sbjct: 107 atatgtatgtgagcaatgctagaaagtcttacattgtgaa 146
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/70 (90%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatg 61
Query: 62 ttaatgaatc 71
||||||||||
Sbjct: 62 ttaatgaatc 71
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaa 151
||||||||||||||||||||||| | ||||||||| ||||| |||||||||||| || |
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 152 gggaatacat 161
|||| |||||
Sbjct: 135 gggagtacat 144
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| ||||||||||||| || | | ||||||||||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||| || ||| ||| || | ||||||||||||| || |||||
Sbjct: 109 atgaatatgggcaatactagaaagtcttacattgtgaaacggaggga 155
Score = 65.9 bits (33), Expect = 2e-10
Identities = 96/116 (82%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||| ||||||||||||||| || || | ||||| |||| || |||||||| |||
Sbjct: 160 cttactccctccgtttcacaatgta--agactttctagtattgcccatattcatatagat 103
Query: 61 gttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatat 116
||||||||||||| | | |||| |||||| ||||||||||||| ||||||||||
Sbjct: 102 gttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatat 47
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 52 catattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatg 111
||||| |||||||||||||||||||| ||| | ||||||||||||||||||| | | |||
Sbjct: 111 catatagatgttaatgaatctaaatatatacacatgtctagattcattaacaactaaatg 52
Query: 112 aatataggaaatgctaaaatgacttacattgtgaa 146
||| | || ||||||| || | |||||||||||||
Sbjct: 51 aatgtgggtaatgctagaaagtcttacattgtgaa 17
Score = 61.9 bits (31), Expect = 2e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || || | ||||| ||| ||||||||| | | ||
Sbjct: 4 ttacttcctccgtttcacaatgta--agactttctagcattacccacattcatttagttg 61
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| | | | ||||| | |||||||||||||||| ||||| |||| | |
Sbjct: 62 ttaatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggaca 121
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| || | ||||||||||||| || |||||
Sbjct: 122 atgctagaaagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| | |||||||||||||| ||| ||||| ||||||||||||||||||| |
Sbjct: 87 cacattcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacc 28
Query: 106 aatatgaatataggaaatgctaaaatg 132
|||||||| | | |||||||| ||||
Sbjct: 27 tatatgaatgtggaaaatgctagaatg 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 31 cattctactatttttcacattcatattgatgttaatgaatctaaatagatatatatgtct 90
||||||| ||||| ||||||||||| | |||||||||||||| | | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 91 agattcattaacatcaatatgaatataggaaatg 124
||||||||||||| | |||||||| | |||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatg 94
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacatt 141
|||||||||||||||||| |||| ||||||||| | ||||||||| |||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 142 gtgaatcgaaggga 155
||||| || |||||
Sbjct: 122 gtgaaacggaggga 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagggaata 158
|||||||||||||| | ||||||||| |||||||||||||||||| || ||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggaata 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaatg 67
||||||||||||||| || |||||||||| |||| ||||||||||||| |||| ||||
Sbjct: 133 cctccgtttcacaatgta--agtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 68 aatcta 73
||||||
Sbjct: 75 aatcta 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgta--agtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||| ||||| ||||||||||||||||| | ||| |||||||||||||||||| ||||
Sbjct: 46 cacatacatataaatgttaatgaatctaaacacatacatatgtctagattcattagcatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
| |||||| | || ||||||| || | ||||||||||||| || |||||
Sbjct: 106 taaatgaatttgggcaatgctagaaagtcttacattgtgaaacggaggga 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||| | |||| ||||||||||| | | || ||| ||| ||||||||||||||| ||
Sbjct: 114 attcatttagatgctaatgaatctagacatatgtatgtgtttagattcattaacatttat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
||| || | || ||||||| || | |||||||||||||
Sbjct: 54 atgtatgtgggcaatgctagaaagtcttacattgtgaa 17
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcg 149
|||||||||||||||| |||||||| | |||||||||| |||||||||||||||||| ||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 150 aaggga 155
|||||
Sbjct: 13 gaggga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatatagatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 107 atatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||| | |||||||||| |||||||||||||||||| || |||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 121
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 17
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| || ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcattttccatattcatattgatgt 62
Query: 63 taatgaat 70
||||||||
Sbjct: 63 taatgaat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||| | |||||||| ||||||||||||| ||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaa 117
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| |||||||||| || | |||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatata--agtcattctagcatatcccacattcatattgatgt 75
Query: 63 taatgaatctaaa 75
|||||||||||||
Sbjct: 74 taatgaatctaaa 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 85 atgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||| ||||||||||||||||||||||||| | ||| |||||| ||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 145 aa 146
||
Sbjct: 119 aa 120
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 aacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||||| | | |||||||| |||||||||||||||||| || |||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcattttccacattcatattgatgt 62
Query: 63 t 63
|
Sbjct: 63 t 63
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || |||||||||| ||||||||| | |||||||||
Sbjct: 131 ttacttcctccgtttcacaatgta--agtcattctagcatttttcacgtatatattgatg 74
Query: 62 ttaatgaatctaaatagatat 82
|||||||||||| ||||||||
Sbjct: 73 ttaatgaatctagatagatat 53
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||||| | | |||||||| ||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaa 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatat 56
|||||||||||| ||||| ||||||||||||
Sbjct: 26 taagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||||||||||||| ||| |||||| || |||||||||||||||||
Sbjct: 22 cacattcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatc 81
Query: 106 aatatgaatataggaaatgcta 127
|||||||| | || |||||||
Sbjct: 82 tatatgaatgtgggcaatgcta 103
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | |||||||| |||||||||||||||||
Sbjct: 93 cacattcatatagatgttaatgaatctaggcacatatatatatctagattcattaacata 34
Query: 106 aatatgaatataggaaatgcta 127
|||||||| | || |||||||
Sbjct: 33 tatatgaatgtgggcaatgcta 12
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||| |||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agttattctagcatttttcacattcatattgatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | |||| |||||||| ||||||||| ||| ||| |||
Sbjct: 63 taatgaatctaga------------tctaaattcattagcatcaatataaatgtagaaaa 110
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||| |||||||||||| || |||||
Sbjct: 111 tgctaaaatgatttacattgtgaaacggaggga 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||| ||||||||||||| | |||||||| ||| ||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 75 atagatatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgac 134
||||||| || | |||||||| |||||||||||||| ||||| ||||||||| ||||||
Sbjct: 62 atagatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgac 121
Query: 135 ttacattgtgaatcgaaggga 155
|||||||||||| || |||||
Sbjct: 122 ttacattgtgaaacggaggga 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 17
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 147 tcgaaggga 155
|| |||||
Sbjct: 125 acggaggga 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/59 (88%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
|||||||||||||||||| || ||||| |||||| ||||| ||| |||||||||||||
Sbjct: 5 tacttcctccgtttcaca--atgtaagtaattctagtatttctcatattcatattgatg 61
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatcta 73
|||||||||||| ||||| || ||||||||||||| |||||||||||
Sbjct: 115 taagtcattctagtatttcccatattcatattgatgctaatgaatcta 68
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||| ||||| ||| ||| ||||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaa 17
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||||||| || ||||||||||||||| | |||||||||| |||||||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 146 a 146
|
Sbjct: 132 a 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaag 152
|||||| ||||||||||||||| | |||||||||| |||| ||||||||||||| || ||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 153 gga 155
|||
Sbjct: 10 gga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgt 87
Query: 63 taatgaatcta 73
| || ||||||
Sbjct: 86 tcataaatcta 76
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
|||||||||||| |||| ||| ||| |||| ||||||| ||||||||| || ||||||
Sbjct: 26 taagtcattctagcatttctcatattgatatagatgttagtgaatctaagtatgtatata 85
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||||||||| ||||||| | ||||| | |||||||| ||||||||||||| |||
Sbjct: 86 tgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgacttacattatga 145
Query: 146 a 146
|
Sbjct: 146 a 146
Score = 75.8 bits (38), Expect = 2e-13
Identities = 107/130 (82%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatata 85
||||||||| || |||||||||||||| | ||||||| |||||||| | | ||||| |
Sbjct: 137 taagtcattgtagcatttttcacattcacttggatgttagtgaatctagacatatataca 78
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
| |||||||| ||||||| |||| ||||| ||||||||| ||||||||||||| |||
Sbjct: 77 tacttagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatga 18
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/153 (81%), Gaps = 14/153 (9%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||||||| ||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagtatttttcatatttatattgatgc 62
Query: 63 taatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaa 122
||||||||||| | |||| |||||||| ||||||||||||| ||| |||
Sbjct: 63 taatgaatctaga------------tctaaattcattagcatcaatatgaatgtagaaaa 110
Query: 123 tgctaaaatgacttacattgtgaatcgaaggga 155
||||| ||||| |||||||||||| || |||||
Sbjct: 111 tgctagaatgatttacattgtgaaacggaggga 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||| ||||||||| ||||| |||| ||| ||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || | |||||||| ||||| |||||||||||||||
Sbjct: 147 ttactccctccgtttcacaatgtaaa--tcattctagcattttctacattcatattgatg 90
Query: 62 ttaatgaat 70
||||||||
Sbjct: 89 ctaatgaat 81
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 95 tcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggg 154
|||||||||||||||||||| | | ||||||||||||||||||||||||||| || ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 155 a 155
|
Sbjct: 8 a 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| || ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattttagcattttccacattcatattgatgt 62
Query: 63 taatga 68
||||||
Sbjct: 63 taatga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 99 taacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||||||| | | |||||||||||| | |||||||||||| || |||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggaggga 125
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 98 ttaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagggaat 157
||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||| |
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 158 acat 161
||||
Sbjct: 5 acat 2
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 98 ttaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaa 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||| ||||||||||| || |||| ||| ||| ||||||||||
Sbjct: 122 tacttcctccgtttcacaa--tataagtcattttagcatttctcatatttatattgatgt 65
Query: 63 taa 65
|||
Sbjct: 64 taa 62
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 91 agattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagggaa 156
|||||||||||||||||| | |||||||||| |||||||||| ||||||| || |||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 157 tacat 161
|||||
Sbjct: 136 tacat 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatg 61
Query: 62 ttaatgaatct 72
||||||||||
Sbjct: 62 gtaatgaatct 72
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaat 66
|||||||||||| |||| |||||||||||||||||||||
Sbjct: 116 taagtcattctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttac 138
||||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 139 attgtgaa 146
||| ||||
Sbjct: 113 attatgaa 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 107 atatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||| ||||||| ||||||||||||| |||| || |||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggaggga 8
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatcta 73
||||||||||| ||||||||||||||||
Sbjct: 91 cacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 1e-14
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 59 atgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatatag 118
||||||||||||||||| | ||| |||||| |||||||||||||||| | |||||| | |
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 119 gaaatgctaaaatgacttacattgtgaa 146
| ||||||| || | |||||||||||||
Sbjct: 44 gtaatgctagaaagtcttacattgtgaa 17
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 104
||||||||| | |||||||||||||||||| | || ||| ||| |||||||||||||||
Sbjct: 46 cacattcatttagatgttaatgaatctaaacatatgtatgtgtttagattcattaacat 104
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaa 151
||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| || |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 152 ggga 155
||||
Sbjct: 11 ggga 8
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaa 151
||||||||| ||||||||||||| | |||||||||| ||||||||||||| |||| || |
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 152 ggga 155
||||
Sbjct: 132 ggga 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatattgatgc 62
Query: 63 taatgaatc 71
|||||||||
Sbjct: 63 taatgaatc 71
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||| ||| || |||||||||| |||| ||||||||||||||||
Sbjct: 139 ttactccctccgtttcataatgta--agtcattctagcatttcccacattcatattgatg 82
Query: 62 ttaatgaatc 71
|||||||||
Sbjct: 81 ctaatgaatc 72
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 130/159 (81%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || || | ||||| |||| ||||||||||| ||||
Sbjct: 159 ttactccctccgtttcacaatgta--agactttctagtattgcccacattcatatagatg 102
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaa 121
|||||||||||| | | |||| |||||| ||||||||||||| |||||||||| || |
Sbjct: 101 ttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggca 42
Query: 122 atgctaaaatgacttacattgtgaatcgaagggaataca 160
| ||| || | ||||||||||||| || ||||| ||||
Sbjct: 41 gtactagaaagtcttacattgtgaaacggagggagtaca 3
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| ||||||||||||| || | | ||||||||||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||| | || ||| ||| || | ||||||||||||| || |||||
Sbjct: 109 atgaatgtgggcaatactagaaagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
|||| |||||||||||||| |||||||||||| | |||||||||| |||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 143 tgaa 146
||||
Sbjct: 100 tgaa 103
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||| ||| || |||||||||| |||| ||||||||||||||| |
Sbjct: 115 tacttcctccgtttcataatgta--agtcattctagcatttcccacattcatattgatat 58
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 57 taatgaatcta 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 122 atgctaaaatgacttacattgtgaatcgaaggga 155
|||||| |||||||||||||||||| || |||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatat--aagtcattctagcattttccacattcatattgatg 61
Query: 62 tta 64
|||
Sbjct: 62 tta 64
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||||||||||||||||| | ||||||| || ||||||||| ||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 148 cgaaggga 155
|| |||||
Sbjct: 125 cggaggga 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatata--agtcattctaacatttcccacattcatattgatgt 78
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 77 taatgaatcta 67
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 99 taacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||| | | |||||||| ||||||||| ||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaa 17
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 48 cattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaa 107
||||||| | |||||||||||||||||| | || |||||||||||||| ||||||||| |
Sbjct: 48 cattcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
Query: 108 tatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||| || | || ||||||| || | ||||||||||||| || |||||
Sbjct: 108 aatgtatgtgggcaatgctagaaagtcttacattgtgaaacggaggga 155
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 58 gatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatata 117
||||||||| |||||| | | ||| |||||| |||||||||||||||| | |||||| |
Sbjct: 105 gatgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaatgga 46
Query: 118 ggaaatgctaaaatgacttacattgtgaa 146
|| ||| ||| || | |||||||||||||
Sbjct: 45 ggtaatactataaagtcttacattgtgaa 17
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
|||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 96 cattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||| |||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttctcacattcatattgatat 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||| |||||||||||||||||||||||| | ||||| || ||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaa 17
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| || ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctaacattttccatattcatattgatgt 62
Query: 63 taatgaat 70
||||||||
Sbjct: 63 taatgaat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||||| |||| ||||||||||||||||| |||| || |||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggaggga 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatg 61
||||||||| || ||||||||| |||||||||||||
Sbjct: 115 taagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 93/110 (84%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||||||||||||| | | | | |||||||||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatct--agacacacatatgtctagattcattaacatc 103
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
| ||||||||| | ||||||| || | |||||||| |||| || |||||
Sbjct: 104 tagatgaatataagcaatgctacaaagtcttacattatgaaacggaggga 153
Score = 69.9 bits (35), Expect = 1e-11
Identities = 83/98 (84%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||| | |||||||||||||||| | | ||| | |||||||||||||||||||| ||
Sbjct: 112 attcatctagatgttaatgaatctagaca--tatgtgtgtctagattcattaacatctat 55
Query: 109 atgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||| | || ||||||| || |||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaagacttacattatgaa 17
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 89 ctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatc 148
||||||||||||||||||||||||||||||| ||||||| || | |||||||| |||| |
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 149 gaaggga 155
| |||||
Sbjct: 14 ggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctaggt--atatgcgtgtctagattcattaacatttat 106
Query: 109 atgaat 114
||||||
Sbjct: 107 atgaat 112
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 48 cattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaa 107
||||||||| |||||||||||||||| ||| ||||| ||||||||||||||| |||| |
Sbjct: 115 cattcatatagatgttaatgaatctatatacttatatgtgtctagattcattagcatcta 56
Query: 108 tatgaatataggaaatgctaaaatgacttacattgtgaa 146
| ||||| | || ||||||| || | |||||||| ||||
Sbjct: 55 tgtgaatgtgggcaatgctagaaagtcttacattatgaa 17
Score = 60.0 bits (30), Expect = 1e-08
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
|||||||| || |||| ||||||||||| | | ||||| | | ||||||||||||||||
Sbjct: 46 cacattcacatagatgctaatgaatctagacacatataagtatatagattcattaacatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||| || ||||||| || | ||||||||||||| || |||||
Sbjct: 106 tatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||| ||||||||||| | |||||||| || |||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaa 122
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||| ||||| ||||| || ||||||||| ||||
Sbjct: 134 tacttcctccgtttcacaatgta--agtccttctagcattttccatattcatattaatgt 77
Query: 63 taatgaatctaaatagatatatatg 87
||||||||||| || |||||||||
Sbjct: 76 taatgaatctagatgaatatatatg 52
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcg 149
|||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||| ||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 150 aaggga 155
|||||
Sbjct: 118 gaggga 123
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaata 77
|||||||||||| |||| ||| |||||||||||| ||||||||||||||||
Sbjct: 105 taagtcattctagcatttctcatattcatattgatattaatgaatctaaata 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatatt 57
|||||||||||||||||| ||||||||||||||| ||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcaca--atataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| |||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaa 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||| |
Sbjct: 126 tacttcctccgtttcacaatgta--agtcattctagcatttccaacattcatattgatat 69
Query: 63 taatgaat 70
||||||||
Sbjct: 68 taatgaat 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| |||||||||||||||||| || |||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
|||| |||||| |||||||||||| ||| | | |||||||||||||||||||||| ||||
Sbjct: 46 cacaatcatatagatgttaatgaacctatacacatatatatgtctagattcattagcatc 105
Query: 106 aatatgaatataggaaatgcta 127
|||||||| | || |||||||
Sbjct: 106 tatatgaatgtgggcaatgcta 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||| ||||||||||| | | |||||| ||| ||| ||||||||||||
Sbjct: 117 cacattcatatagatgctaatgaatctagacatatatatgtgtataggttcattaacatc 58
Query: 106 aatatga 112
||||||
Sbjct: 57 tatatga 51
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
|||||||||||||||||||| | ||||||||| | |||||||||| ||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 141 tgtgaa 146
||||||
Sbjct: 113 tgtgaa 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/55 (87%), Gaps = 2/55 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatatt 57
|||||||||||||||||| || |||||||||||| |||| ||||||||||||
Sbjct: 130 tacttcctccgtttcaca--atgtaagtcattctagcatttcccacattcatatt 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/54 (87%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatat 56
|||||||||||||||||| || ||||| |||||| |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcaca--atgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | |||| |||| ||||||||||||||||
Sbjct: 93 cacattcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaacata 34
Query: 106 aatatgaatataggaaatgcta 127
|||||||||| || |||||||
Sbjct: 33 tatatgaatatgggcaatgcta 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 49 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 108
|||||||| ||||||||||||||| | | ||||||| ||||||||||||||||| ||
Sbjct: 25 attcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatctat 84
Query: 109 atgaatataggaaatgcta 127
|||||| | || |||||||
Sbjct: 85 atgaatgtgggcaatgcta 103
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||||||| || ||||||| || |||||| ||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgta--agtcattttagtattttccacattcatattgatg 61
Query: 62 ttaat 66
|||||
Sbjct: 62 ttaat 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 84 tatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgt 143
||||| || ||| |||||||||||||||||| | | |||| |||||||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 144 gaa 146
|||
Sbjct: 19 gaa 17
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 82 tatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacatt 141
|||||||||||||||||||||||| |||||||| | || ||||||| || ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 142 gtgaa 146
||||
Sbjct: 21 atgaa 17
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatcta 73
||||||||||| ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgactta 137
|||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 23 atataagtcattctactatttttcacattcatattgatgttaatgaatcta 73
||||||||||||||| |||| ||||||||||||||||| |||||||||||
Sbjct: 107 atataagtcattctagcatttctcacattcatattgatgctaatgaatcta 57
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 50 ttcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaata 109
||||||| ||||| |||||||||||| | ||||||||||||||||||||| |||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 110 tgaat 114
|||||
Sbjct: 53 tgaat 49
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||| |||||||||| | | |||||| ||| |||||||||| |||||
Sbjct: 46 cacattcatatatatgtcaatgaatctagacatatatatgtgtttagattcattgacatc 105
Query: 106 aatatgaa 113
|||||||
Sbjct: 106 tatatgaa 113
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 76 tagatatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgact 135
||||||||| | ||||||| ||||||||||||||||||| | |||||||||| |||||||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Query: 136 t 136
|
Sbjct: 123 t 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatat 84
||||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgactt 136
||||||| ||||||||||||||||||| | |||||||||| ||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||||||||||||| | | | |||||||| |||||||||| | |||
Sbjct: 46 cacattcatatatatgttaatgaatctagacacacatatatgtttagattcattgatatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||| | || |||||||||| | |||||||| ||||
Sbjct: 106 tatatgaatgtgggcaatgctaaaaagtcttacattatgaa 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||| | |||||||||||| | |||| | |||||||||||||||||||
Sbjct: 117 cacattcatatagatatcaatgaatctaaacatatatgtgtgtctagattcattaacata 58
Query: 106 aatatgaat 114
||||||||
Sbjct: 57 tatatgaat 49
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| |||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttctcacattcatattgctgt 62
Query: 63 taatgaat 70
||||||||
Sbjct: 63 taatgaat 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||| |||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 107 atatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| | |||||||| |||||||||||||||||| || |||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggaggga 127
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 94 ttcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||||| | |||||||||| |||||||| |||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaa 17
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| | |||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgca--agtcattctagcatttcccacattcatattgatgt 62
Query: 63 taatgaa 69
|||||||
Sbjct: 63 taatgaa 69
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||||||| || ||||||||||
Sbjct: 131 tacttcctccgtttcacaatgta--agtcattctagcatttttcacgtttatattgatgt 74
Query: 63 taatgaat 70
||||||||
Sbjct: 73 taatgaat 66
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 120 aaatgctaaaatgacttacattgtgaatcgaagggaataca 160
||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagtaca 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||| || | |||||||| ||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaa 119
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaa 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatat 82
|||||||||||||||||||||||||||| ||||||||
Sbjct: 47 cacattcatattgatgttaatgaatctagatagatat 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatg 124
||||||||||||||||||||||||||| | |||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatg 40
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/59 (86%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
||||||||||||||||||| || |||||||||||| |||| || ||||||||||||
Sbjct: 138 ttacttcctccgtttcaca--atgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||| ||| ||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 148 cgaaggga 155
|| |||||
Sbjct: 122 cggaggga 129
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||||||| |||||||||| |||| |||||||||||| |||
Sbjct: 132 tactccctccgtttcacaatata--agtcattctagcatttcccacattcatattaatgc 75
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 74 taatgaatcta 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||| || |||||||||||| |||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcaca--atgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||||||| ||||||||||||
Sbjct: 131 tactccctccgtttcacaatgta--agtcattctatcatttttcacgttcatattgatgc 74
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 73 taatgaatcta 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 89 ctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatc 148
|||||||||||| |||||||||||| | ||||| || |||||||||||||||||| |
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 149 gaaggga 155
| |||||
Sbjct: 122 ggaggga 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatat 56
||||||||||||| ||||||||||||||| |||| ||| ||||||||
Sbjct: 10 cctccgtttcaca--atataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/69 (88%), Gaps = 4/69 (5%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 79 cacattcatatatatgttaatgaatcta----gatatatatgtctagattcattaacata 24
Query: 106 aatatgaat 114
||||||||
Sbjct: 23 tatatgaat 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 69/82 (84%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||||||||||||| || |||||| |||||||||||||||||
Sbjct: 12 cacattcatatatatgttaatgaatcta----gacatatatatctagattcattaacata 67
Query: 106 aatatgaatataggaaatgcta 127
|||||||| | || |||||||
Sbjct: 68 tatatgaatgtgggcaatgcta 89
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttac 138
|||||||| |||||||| |||||||||| ||||||| | |||||| ||| ||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 139 attgtgaa 146
||| ||||
Sbjct: 125 attatgaa 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatatat 84
|||||||||||| ||||| |||||||||| |||||||||| |||||| ||| ||||||
Sbjct: 123 taagtcattctagtatttcccacattcatagtgatgttaataaatctagatatatatat 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 97 attaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||| ||||||| | |||||||| ||||||||||||| ||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaa 17
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 3e-12
Identities = 68/78 (87%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 50 ttcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaata 109
||||||||||| |||||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaata 72
Query: 110 tgaatataggaaatgcta 127
|||| | ||||||||||
Sbjct: 73 tgaacgtgggaaatgcta 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 67/78 (85%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 50 ttcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaata 109
||||||||||| |||||||||||| || ||||| | |||||||||||||| |||||||
Sbjct: 76 ttcatattgatattaatgaatctagat---tatatctatctagattcattaatatcaata 20
Query: 110 tgaatataggaaatgcta 127
|||| | ||||||||||
Sbjct: 19 tgaacgtgggaaatgcta 2
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||| ||| ||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||||| ||||||||||| |||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatat--aagtcattctagcatttcccacattcatattaatgc 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 120
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||||||||||||||| || |||||||||||| |||| |||||||||||||||
Sbjct: 132 tacttcctccgtttcaca--atgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||||||| ||||||||||||| | ||||||||||||||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 98 ttaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagggaat 157
|||||||| |||||||| | |||||||||| |||||||||||||||||| || ||||| |
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 158 acat 161
||||
Sbjct: 5 acat 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 95 tcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||| |||||||| | |||||||||| ||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaa 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| ||||||||||| |||||
Sbjct: 130 tacttcctccgtttcacaatgta--agtcattctagcatttcccacattcatatcgatgt 73
Query: 63 taatga 68
||||||
Sbjct: 72 taatga 67
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/63 (85%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagcatttcccacattcatatcgatgt 62
Query: 63 taa 65
|||
Sbjct: 63 taa 65
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
|||||| ||||||||||||||||||||||||||| | | ||||| || | ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 141 tgtgaatcgaaggga 155
||||| || |||||
Sbjct: 113 ggtgaaacggaggga 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatctaaatagatat 82
||||||| |||| ||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct: 109 taagtcactctaacattttccacattcatattgatgttaatgaatctagatatatat 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 107 atatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| ||||||||||| |||||| ||||||||| || |||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggaggga 8
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| |||||||||| |||| |||||||| |||||| |
Sbjct: 135 tacttcctccgtttcacaatata--agtcattctagcatttcccacattcacattgatat 78
Query: 63 taatgaatct 72
||||||||||
Sbjct: 77 taatgaatct 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 91 agattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||| |||||| ||||| | |||||||||| ||||||||| ||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaa 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||||| ||||||||||| |||| |||||||| |||||| |
Sbjct: 5 tactccctccgtttcacaatat--aagtcattctagcatttcacacattcacattgatat 62
Query: 63 taatga 68
||||||
Sbjct: 63 taatga 68
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 100 aacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 85 atgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtg 144
|||| ||||||||| ||||||||||||||| | | |||||||| ||| ||||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 145 aatcgaaggga 155
|| || |||||
Sbjct: 18 aaacggaggga 8
Score = 60.0 bits (30), Expect = 1e-08
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||| |||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agttattctagcattttccacattcatattgatgt 62
Query: 63 taatgaatctaaa 75
| |||||||||||
Sbjct: 63 t-atgaatctaaa 74
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| || ||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgta--agtcattctagcattttccatattcatattgatgt 74
Query: 63 t 63
|
Sbjct: 73 t 73
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||
Sbjct: 137 tacttcctccgtttcacaatata--agtcattttagcatttttcacattcatgttgatgt 80
Query: 63 ta 64
||
Sbjct: 79 ta 78
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcg 149
|||||||||||| |||||||| |||| ||||||||| ||||||||| |||||||| ||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 150 aagggaata 158
||||||||
Sbjct: 13 gagggaata 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaatg 67
||||||||||||||||| ||||||||||| |||| ||| || |||||||| ||||||
Sbjct: 10 cctccgtttcacaatat--aagtcattctagcatttctcatatagatattgatattaatg 67
Query: 68 aatcta 73
||||||
Sbjct: 68 aatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 99 taacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| |||||| | |||||||||||||||||| ||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaa 125
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
|||| ||||||||||||||||||| ||| | ||||| |||||||||||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 141 tgtgaa 146
||||||
Sbjct: 22 tgtgaa 17
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||| ||||||||||||||| |||||||| || |||||||| ||| | ||| ||||
Sbjct: 5 tacttcttccgtttcacaatat--aagtcattttagcatttttcatatttacattaatgt 62
Query: 63 taatgaatctaaatagatat 82
||||||||||| | ||||||
Sbjct: 63 taatgaatctagacagatat 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/49 (89%), Gaps = 2/49 (4%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatatataagtcattctactatttttcacattcatat 56
|||||||||||||||||| ||||||| || |||||||||||||||||
Sbjct: 125 cctccgtttcacaatata--agtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||| |||||| ||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agttattctagcattttccacaattatattgatgt 62
Query: 63 taatgaatctaaatagatata 83
||||||||||| |||||||||
Sbjct: 63 taatgaatctatatagatata 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcg 149
||||||||||||||||||||| | | | | |||||||| ||| |||||||||||||| ||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 150 aaggga 155
|||||
Sbjct: 13 gaggga 8
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||| |||| |||||| ||| ||| |||||||||||||||| ||||
Sbjct: 46 cacattcatatagatgctaataaatctatatatataataatgtctagattcattagcatc 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||| | || |||| || || | ||||||||||||| || |||||
Sbjct: 106 tatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
||||||||| ||||||||||||||| |||||||| | || ||||||| ||||||||| ||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatat 23
Query: 141 tgtgaa 146
| ||||
Sbjct: 22 tatgaa 17
Score = 63.9 bits (32), Expect = 6e-10
Identities = 122/150 (81%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 6 ttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgttaa 65
||||||||||||| |||||| |||||||||| ||| ||||||||||| ||||||||
Sbjct: 8 ttcctccgtttcataatata--agtcattctagcattgcccacattcatatagatgttaa 65
Query: 66 tgaatctaaatagatatatatgtctagattcattaacatcaatatgaatataggaaatgc 125
||||||| | |||||| || |||||||||||| ||| ||| |||| | || ||| |
Sbjct: 66 tgaatct--ggacatatatgtggctagattcattagtatctataagaatgtgggcaatcc 123
Query: 126 taaaatgacttacattgtgaatcgaaggga 155
|| ||||||||| |||||||| || |||||
Sbjct: 124 tagaatgacttatattgtgaaacggaggga 153
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/64 (89%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| | |||||||||| ||||||||||||| |||||||| |
Sbjct: 108 tacttcctccgtttcacaatgca--agtcattctagtatttttcacatttatattgatat 51
Query: 63 taat 66
||||
Sbjct: 50 taat 47
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || ||||||| || ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattatagtatttttcacattcatattgatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattga 59
|||||||||||| |||||||||||||||||||||
Sbjct: 95 taagtcattctagtatttttcacattcatattga 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||||| | |||| ||| |||||||||||||||||| || |||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||| |||||| ||||| ||||||||||| ||||| |||||||||| |||||
Sbjct: 5 tacttcctctgtttcataatat--aagtcattctagcattttccacattcatactgatgc 62
Query: 63 taatgaatctaaatag 78
||||||||||| ||||
Sbjct: 63 taatgaatctagatag 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||||| | |||||||||| ||||||||||||| |||| || |||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggaggga 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||| ||||| ||||||| | | |||||||| ||||||||| ||| ||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaa 17
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| ||||| ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttt-cacatccatattgatgt 61
Query: 63 taatgaat 70
||||||||
Sbjct: 62 taatgaat 69
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||| || | | |||||||| ||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgt-gaaaatgctagaatgacttacattgtgaa 17
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 120 aaatgctaaaatgacttacattgtgaa 146
|||||||| ||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaa 100
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaa 17
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatatt 57
||||||||||||||||||| |||||||||||||| |||| ||||||||||||
Sbjct: 119 tacttcctccgtttcacaa--tataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||||| | | ||| ||||||||||||||||||||
Sbjct: 93 cacattcatatagatgttaatgaatctaggcacacatacatgtctagattcattaacata 34
Query: 106 aatatgaat 114
||||||||
Sbjct: 33 tatatgaat 25
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||||||||||||||| | | ||| | || |||||||||||||||||
Sbjct: 22 cacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatc 81
Query: 106 aatatgaatataggaaatgcta 127
|||||||| | || |||||||
Sbjct: 82 tatatgaatgtgggcaatgcta 103
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagata--tatatgtctagattcattaaca 103
||||||||||| |||||||||||||||| ||| ||| | | ||| ||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctatatatatatgtgtgtgtatagattcattaaca 105
Query: 104 tcaatatgaatataggaaatgcta 127
|| |||||||| | || |||||||
Sbjct: 106 tctatatgaatgtgggcaatgcta 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 71/84 (84%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatc--taaatagatatatatgtctagattcattaaca 103
||||||||||| |||||||||||||| || | | | |||||| | ||||||||||||||
Sbjct: 119 cacattcatatagatgttaatgaatctatacacacacatatatatatagattcattaaca 60
Query: 104 tcaatatgaatataggaaatgcta 127
|| |||||||| | || |||||||
Sbjct: 59 tctatatgaatgtgggcaatgcta 36
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| | |||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaa 17
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 94 ttcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaagg 153
||||||||||||| ||| ||| | |||||||||| ||||||||| |||||||| || |||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 154 ga 155
||
Sbjct: 117 ga 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| |||| |||||| ||| ||||||
Sbjct: 121 tactccctccgtttcacaatcta--agtcattctagcatttcccacatttatactgatgt 64
Query: 63 taatgaa 69
|||||||
Sbjct: 63 taatgaa 57
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttctcacattcatattgatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 95 tcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||||| | | || ||||||||||||||||||| ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaa 17
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||||||||||||||| ||| || ||||||| || | ||| ||||||||||||||||
Sbjct: 4 ttacttcctccgtttcataatgta--agtcattttagcactttccacattcatattgatg 61
Query: 62 ttaatga 68
|||||||
Sbjct: 62 ttaatga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| | |||| ||||| ||||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaa 111
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 63.9 bits (32), Expect = 6e-10
Identities = 67/79 (84%), Gaps = 6/79 (7%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 77 cacattcatattgatgtcaatgaatctagacagat------gtctagattcattgacatc 24
Query: 106 aatatgaatataggaaatg 124
||||||||| | |||||||
Sbjct: 23 aatatgaatgtgggaaatg 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 69/82 (84%), Gaps = 6/82 (7%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||||||||| |||||||||| | | | |||||||||||||| |||||
Sbjct: 12 cacattcatattgatgtcaatgaatctagaca------tctgtctagattcattgacatc 65
Query: 106 aatatgaatataggaaatgcta 127
||||||||| | ||||||||||
Sbjct: 66 aatatgaatgtgggaaatgcta 87
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttac 138
||||||||||||||||||||||||||| | |||||| | | ||||||| || | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 139 attgtgaa 146
||||||||
Sbjct: 24 attgtgaa 17
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || || | ||||| ||| | ||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgta--agactttctagcattatccacattcatttagatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaagggaatacat 161
||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 45 ggaaatgctaaaatgacttacattgtgaaacggagggagtacat 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 120 aaatgctaaaatgacttacattgtgaa 146
|||||||| ||||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaa 96
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| ||||||||||||||| || |||||||||| ||||| |||| | ||||||||||
Sbjct: 139 tactccctccgtttcacaatgta--agtcattctagcattttccacaattatattgatgt 82
Query: 63 taatgaatctaaatagata 81
|||| |||||| |||||||
Sbjct: 81 taataaatctatatagata 63
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcg 149
|||||| |||||||||||||| | | | | |||||||| |||||||||||||||||| ||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 150 aaggga 155
|||||
Sbjct: 131 gaggga 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 120 aaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaa 17
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
|||| ||| ||||| |||||||| ||| | |||||||||| ||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/58 (89%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
||||||||||||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaa--tataagtcattctagcatttcccacattcatattgat 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||| || |||||||||||| |||| |||||| ||||||||
Sbjct: 4 ttactccctccgtttcaca--atgtaagtcattctagcatttcccacatttatattgata 61
Query: 62 ttaat 66
|||||
Sbjct: 62 ttaat 66
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/59 (89%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
|||| ||||||||||||||| || |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agtcattctagtatttctcacattcatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||||||| | ||||| ||| |||||||||||||||||| || |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
||||||||||||| ||||||||| |||||||| | || ||||||| || | |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 143 tgaa 146
||||
Sbjct: 119 tgaa 122
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 75/89 (84%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 58 gatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatata 117
|||||||||||||||||||| |||| ||||||||||||||||||| | |||||| |
Sbjct: 101 gatgttaatgaatctaaatacatat----gtctagattcattaacatctaaatgaatgtg 46
Query: 118 ggaaatgctaaaatgacttacattgtgaa 146
|| || |||| || | |||||||||||||
Sbjct: 45 ggcaacgctacaaagtcttacattgtgaa 17
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 6/75 (8%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaata----gatat--atatgtctagattcatt 99
||||||||||| |||||||||||||||| ||| ||||| || ||||||||||||||
Sbjct: 18 cacattcatatggatgttaatgaatctagatatatggatattaatgtgtctagattcatt 77
Query: 100 aacatcaatatgaat 114
|||||| ||||||||
Sbjct: 78 aacatccatatgaat 92
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgcta 127
|||| |||||||||||||||||| |||||||| | || |||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgcta 8
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatcta 73
||||||||||| ||||||||||||||||
Sbjct: 95 cacattcatatggatgttaatgaatcta 68
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaa 94
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/58 (89%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
||||||||||||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaa--tataagtcattctagcatttcccacattcatattgat 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
|||| ||| ||||| |||||||| ||| | | |||||||| ||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 148 cgaaggga 155
|| |||||
Sbjct: 15 cggaggga 8
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||||| || |||||||||| ||||| |||||| ||||||||
Sbjct: 4 ttactccctccgtttcacaatgta--agtcattctagcattttccacatttatattgata 61
Query: 62 ttaat 66
|||||
Sbjct: 62 ttaat 66
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||| |||||||| |||||||||| |||| ||||||| ||||||||||
Sbjct: 93 tacttcctccgttttacaatata--agtcattctagcatttctcacatttatattgatgt 36
Query: 63 taatga 68
|||||
Sbjct: 35 aaatga 30
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattca-ttaacat 104
||||||||||| |||||||||||||||| ||| || || |||||||||| | |||||||
Sbjct: 118 cacattcatatagatgttaatgaatctagatatatgtaggtgtctagattaatttaacat 59
Query: 105 caatatgaatataggaaatgcta 127
| |||||||| | || |||||||
Sbjct: 58 ctatatgaatgtgggtaatgcta 36
Score = 54.0 bits (27), Expect = 6e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaa-tgaatctaaatagatatatatgtctagattcattaacat 104
||||||||||| |||||||| | |||||| | | || |||| |||||||||||||||||
Sbjct: 46 cacattcatatagatgttaaattaatctagacacctacatatatctagattcattaacat 105
Query: 105 caatatgaatataggaaatgcta 127
| |||||||| | || |||||||
Sbjct: 106 ctatatgaatgtgggcaatgcta 128
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatg 124
|||||||||||||| ||||||| ||||||||||||| | |||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatg 124
||||||||||||||||| |||| ||||||||||||| | |||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||| ||||| |||| | |||||||||||| |||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaa 125
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 102 catcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | |||||||||| |||||||||||||||||| || |||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/53 (90%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcata 55
|||||||||||||||||||| || |||||||||| |||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagtattttccacattcata 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||||||||||||| |||||||||||||| |||| || ||| ||||| |||
Sbjct: 139 tacttcctccgtttcacaa--tataagtcattctaggatttctctcatccatataattgt 82
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 81 taatgaatcta 71
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattaaca 103
||||||||||||||||||||||
Sbjct: 63 tatatgtctagattcattaaca 84
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 93 attcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||| ||||| |||| | |||||||||||| |||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaa 17
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 53 atattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatga 112
|||| |||||||||||||||| | | ||| |||| |||||||||||||| ||| | || |
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 113 atataggaaatgctaaaatgacttacattgtgaa 146
|| | | |||||||||| | |||||||||||||
Sbjct: 111 atgtggacaatgctaaaaagtcttacattgtgaa 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 62 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatat 110
|||||||||||| ||| || ||| | |||||||||||||||||| ||||
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacatctatat 51
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||||||||||||||||||| || |||||||||| |||| ||||||| ||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgta--agtcattctagcatttctcacatttatattaatgt 62
Query: 63 taatg 67
|||||
Sbjct: 63 taatg 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 96 cattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| ||||| ||| | ||||||||| ||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/57 (89%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattga 59
||||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 114 tacttcctccgtttcacaa--tataagtcattctagcatttcccacattcatattga 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 104 tcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 102
Score = 50.1 bits (25), Expect = 9e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | |||||||||| ||||||||| |||||||| || |||||
Sbjct: 59 atcaatatgaatgt-ggaaatgctagaatgacttatattgtgaaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/58 (87%), Gaps = 3/58 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||| ||||||||||||| ||||||||||||||| | ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcaca--atataagtcattctagca-tttccacattcatattgat 59
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||| | |||||| ||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaa 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/57 (87%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatatt 57
|||||||||||||||||||| || ||||||||| || ||||| ||||||||||||
Sbjct: 111 cttacttcctccgtttcaca--atgtaagtcattttagtatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 126 taaaatgacttacattgtgaatcgaaggga 155
||||||||||||||||||||| || |||||
Sbjct: 37 taaaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatgactt 136
||||||||| ||||||||||||| | |||||||||| ||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 92 gattcattaacatcaatatgaatataggaaatgctaaaatga 133
||||||||| ||||||||||||| | |||||||||| |||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 27 aagtcattctactatttttcacattcatattgatgttaatgaatc 71
||||||||||| |||| |||||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatc 71
|||||||||||||||| |||||||||
Sbjct: 71 cacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||| |||||||| |||||||||| | ||||||| || | |||||||| |||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 146 atcgaagggaata 158
| || ||||||||
Sbjct: 17 aacggagggaata 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaatataggaaatgcta 127
|||||||||||||||||||||||||| |||||||| | || |||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgcta 101
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 117 cacattcatatatatgttaatgaatcttggcacatatatatgtctagatttattaacata 58
Query: 106 aatatgaat 114
||||||||
Sbjct: 57 tatatgaat 49
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||||||| |||||| | | |||||| || | ||||||||||||||
Sbjct: 46 cacattcatatatatgttaataaatctagacatatatatgtgccaagattcattaacata 105
Query: 106 aatatgaatataggaaatgcta 127
|||||||| | || |||||||
Sbjct: 106 tatatgaatgtgggcaatgcta 127
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | |||||||||| ||||||||| |||||||| || |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||| ||||||||||||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatat--aagtcattctagcatttcccacattcatattgat 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 104 tcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/58 (87%), Gaps = 3/58 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgttt-cacaatatataagtcattctactatttttcacattcatattga 59
|||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 116 tacttcctccgttttcacaatata--agtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaat 114
|||||||||||||||||||||| |||| ||||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaat 94
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 84 tatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgt 143
|||||||||||| ||||||||| |||||||| | | ||||||| ||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 144 gaatcgaaggga 155
||| || |||||
Sbjct: 123 gaaacggaggga 134
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 87 gtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||||||||||||||| ||||| || | || ||||||| ||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattaacatcaatatgaat 114
||||| ||||||||||||||||||||| ||||||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaat 88
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatcta 73
||||||||||| ||||||||||||||||
Sbjct: 91 cacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatc--taaatagatatatatgtctagattcattaaca 103
||||||||||| |||||||||||||| || | | |||| | ||| ||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaaca 105
Query: 104 tcaatatgaat 114
|| ||||||||
Sbjct: 106 tctatatgaat 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatc--taaatagatatatatgtctagattcattaaca 103
||||||||||| |||||||||||||| || | | |||| | ||| ||||||||||||||
Sbjct: 119 cacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaaca 60
Query: 104 tcaatatgaat 114
|| ||||||||
Sbjct: 59 tctatatgaat 49
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcg 149
|||||||||||||||| |||||||| | || ||||||| || | |||||||| |||| ||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 150 aagggaatacat 161
||||| |||||
Sbjct: 132 gagggagtacat 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatcta 73
||||||||||| ||||||||||||||||
Sbjct: 99 cacattcatatagatgttaatgaatcta 72
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacatt 141
|||||||||||||||| ||||||| ||| |||| | | ||||| || |||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 26 taagtcattctactatttttcacattcatattgatgttaatgaatcta 73
|||||||||||| ||||| ||||||| ||| ||||||| ||||||||
Sbjct: 117 taagtcattctaacattttccacattcgtatggatgttagtgaatcta 70
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 cttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||||| ||||||||||| ||| || |||||||||| |||| |||||||||||| |||
Sbjct: 3 cttactccctccgtttcataatgta--agtcattctaacatttctcacattcatatggat 60
Query: 61 gt 62
||
Sbjct: 61 gt 62
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaa 146
|||||||||||||||||| |||||||||| | ||||||| || |||||| ||| ||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 88 tctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtgaat 147
||||||||||||| |||| |||||||||| || ||||||| || | |||| ||| ||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 148 cgaagggaatacat 161
|| ||||| |||||
Sbjct: 130 cggagggagtacat 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
||||||||| |||||| |||||| |||| ||||| ||| ||| |||||||| |||||
Sbjct: 5 tacttcctctgtttcataatata--agtctttctagcattgctcatattcatatagatgt 62
Query: 63 taatgaatcta 73
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 84 tatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgt 143
|||||||||||||||||||||| |||| ||||| | ||||||| || | |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 144 gaa 146
|||
Sbjct: 123 gaa 125
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 116 taggaaatgctaaaatgacttacattgtgaa 146
|||||||||||| ||||||||||||||||||
Sbjct: 47 taggaaatgctagaatgacttacattgtgaa 77
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacat 140
||||| ||||||||||||||| ||| ||||| |||| || ||| || ||||||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 141 tgtgaatcgaaggga 155
| |||| || |||||
Sbjct: 22 tatgaaacggaggga 8
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 108 tatgaatataggaaatgctaaaatgacttacattgtgaa 146
||||||| | |||||||||| ||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaa 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 119 gaaatgctaaaatgacttacattgtgaa 146
||||||||| ||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaa 17
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/53 (86%), Gaps = 2/53 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcata 55
|||||||||||||||||| || |||||||||||| |||| ||||||||||
Sbjct: 95 tacttcctccgtttcaca--atgtaagtcattctagcatttcccacattcata 45
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 85 atgtctagattcattaacatcaatatgaatataggaaatgcta 127
||||||||||||||||||||| |||||||| | || |||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgcta 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatcta 73
||||||||||| ||||||||||||||||
Sbjct: 85 cacattcatatagatgttaatgaatcta 58
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaa 75
||||||||||| ||||||||||||||||||
Sbjct: 91 cacattcatatagatgttaatgaatctaaa 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgcta 127
|||||||||||||||| |||||||| | || |||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgcta 101
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| |||||||||||||||||| || |||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||| ||||||||||||| |||||||| | || |||||||||| | ||||||| |||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 130 aacggaggga 139
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 120 aaatgctaaaatgacttacattgtgaatcgaagggaatacat 161
|||||||| |||||||||||||||||| || ||||| |||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagtacat 119
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| |||||||||||||||||| || |||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||| ||||||||||||| |||||||| | || ||||||| || | |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
|||||||||| ||||||||| |||||||| | | ||||||| || | ||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 146 atcgaaggga 155
| || |||||
Sbjct: 128 aacggaggga 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 101 acatcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||| |||||||||| | |||||||||| | ||||||||||||| || |||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggaggga 8
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaa 75
||||||||||| ||||||||||||||||||
Sbjct: 91 cacattcatatagatgttaatgaatctaaa 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 90 tagattcattaacatcaatatgaatataggaaatgcta 127
|||||||||||||||| |||||||| | || |||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgcta 101
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | | |||||||| ||| |||||||||||||| || |||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggaggga 122
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | | |||||||| ||| |||||||||||||| || |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/58 (86%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||| ||||||||||||||| || ||| |||||| ||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| |||||||||||||||||| || |||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 ggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||| |||||||||||||||||| || |||||
Sbjct: 109 ggaaatgctagaatgacttacattgtgaaacggaggga 146
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 118 ggaaatgctaaaatgacttacattgtgaa 146
|||||||||| ||||||||||||||||||
Sbjct: 66 ggaaatgctagaatgacttacattgtgaa 94
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | | |||||||| ||| |||||||||||||| || |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 8
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 103 atcaatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||||||| | | |||||||| ||| |||||||||||||| || |||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/58 (86%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||| ||||||||||||||| || ||| |||||| ||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgta--agttattctagcattttccacattcatattgat 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/58 (86%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgat 60
|||| ||||||||||||||| || ||| |||||| ||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgta--agttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| ||| ||||||||||| | | ||||||||||||||||||| ||||
Sbjct: 25 cacattcatatctatgctaatgaatctaggcacacatatatgtctagattcatttgcatc 84
Query: 106 aatatgaat 114
||||||||
Sbjct: 85 tatatgaat 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
||||||||||| |||| |||||||||| | | |||| | || |||||||||||| |||
Sbjct: 96 cacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcata 37
Query: 106 aatatgaatataggaaatgctaaaatgacttacatt 141
|||||||| | || ||||||| || | ||||||||
Sbjct: 36 gatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 86 tgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgtga 145
||||||||||| |||||||| |||||||| | | ||||||| || | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 146 atcgaagggaata 158
| || ||||||||
Sbjct: 96 aacggagggaata 108
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/48 (89%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacat 50
|||| ||| ||||||||||||| ||||||||||| ||||||||||||
Sbjct: 5 tactcccttcgtttcacaatat--aagtcattctagtatttttcacat 50
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 119 gaaatgctaaaatgacttacattgtgaatcgaaggga 155
||||||||| ||||||||||||| |||| ||||||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaaggga 143
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
|||||| |||||||||||||||| ||||| || | || ||||||| || | |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 143 tgaatcgaaggga 155
|||| || |||||
Sbjct: 121 tgaaacggaggga 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatata 25
|||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatata 27
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgt 88
||||| ||||| |||||||||||||||||| | || |||||||
Sbjct: 95 cacatacatatagatgttaatgaatctaaacatatgtatatgt 53
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 83 atatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattg 142
|||||| |||||||||||||||| ||||| || | || ||||||| || | |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 143 tgaatcgaaggga 155
|||| || |||||
Sbjct: 20 tgaaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgt 88
||||| ||||| |||||||||||||||||| | || |||||||
Sbjct: 46 cacatacatatagatgttaatgaatctaaacatatgtatatgt 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatata 25
|||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatata 114
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 119 gaaatgctaaaatgacttacattgtgaa 146
||||||||| ||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaa 17
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/63 (85%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 2 ttacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatg 61
||||| ||||||||||||| |||||||| |||||| |||| |||||||| |||||||
Sbjct: 4 ttactccctccgtttcaca--atataagttattctagcatttcccacattcacattgatg 61
Query: 62 tta 64
|||
Sbjct: 62 tta 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 119 gaaatgctaaaatgacttacattgtgaa 146
||||||||| ||||||||||||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaa 114
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/74 (83%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatatataagtcattctactatttttcacattcatattgatgt 62
|||| |||||||||||||| |||||| | ||||| |||| ||||||||| | |||||
Sbjct: 124 tactccctccgtttcacaa--tataagactttctaatattgcacacattcatttagatgt 67
Query: 63 taatgaatctaaat 76
|||| |||||||||
Sbjct: 66 taataaatctaaat 53
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 84 tatgtctagattcattaacatcaatatgaatataggaaatgctaaaatgacttacattgt 143
|||||||| |||||||| ||| |||||||| | || ||||||| || | ||||||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 144 gaa 146
|||
Sbjct: 112 gaa 114
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcatta 100
||||||||||| ||| ||||||||||| | | ||||||||||||||||||||
Sbjct: 117 cacattcatatatatgctaatgaatctaggcacacatatatgtctagattcatta 63
Score = 44.1 bits (22), Expect = 6e-04
Identities = 88/110 (80%)
Strand = Plus / Plus
Query: 46 cacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatc 105
|||||| |||| ||| ||||||||||| | | |||| | || |||||||||||| |||
Sbjct: 46 cacatttatatagatactaatgaatctagacatatatgtgtgcctagattcattagcata 105
Query: 106 aatatgaatataggaaatgctaaaatgacttacattgtgaatcgaaggga 155
|||||||| | || ||||||| || | |||||||| |||| || |||||
Sbjct: 106 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggga 155
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 118 ggaaatgctaaaatgacttacattgtg 144
|||||||||| ||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtg 19
