miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 151 bits (76), Expect = 3e-36
Identities = 102/111 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||||||||||||| |||||||| ||||||| |||| |||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagattcat 65
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| |||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 64 taacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 97.6 bits (49), Expect = 4e-20
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat-tca 73
|||||| ||||||||||||||||||||||| |||||||| ||||||| |||| ||| | |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| | ||| |||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 65 atga-atctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 115
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 127 bits (64), Expect = 5e-29
Identities = 111/128 (86%), Gaps = 8/128 (6%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt------- 67
|||||| ||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttt 64
Query: 68 -gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacga 126
||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 65 agattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacgg 124
Query: 127 agtaagta 134
|| |||||
Sbjct: 125 aggaagta 132
Score = 69.9 bits (35), Expect = 9e-12
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 76 aacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 121 bits (61), Expect = 3e-27
Identities = 88/96 (91%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattcattaacatc 81
||||||||||||||||||||||| |||||||||||| ||| || | ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccatatt-atctagattcattaacatc 70
Query: 82 aatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||| ||| |||||||||| |||||||||
Sbjct: 71 aatatgaatgtaggaaatgctagaatgacttacatt 106
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| |||||||| | ||||| ||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgat 68
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 121 bits (61), Expect = 3e-27
Identities = 108/123 (87%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatt--tatattgatt 71
||||||| ||||||||||||||||||||||| |||||||| |||| || ||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatatatatt 63
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaa 131
|||||| |||||||||||||| ||| |||||||||| ||||||||||| ||||| || ||
Sbjct: 64 cattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaa 123
Query: 132 gta 134
|||
Sbjct: 124 gta 126
Score = 87.7 bits (44), Expect = 4e-17
Identities = 91/106 (85%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat--tcattaaca 79
||||||||||||||||||||||| |||||||| | ||||| |||||||| | || || |
Sbjct: 119 tccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaata 60
Query: 80 tcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| ||||||| |||||| |||||||||| ||||||||||| |||||
Sbjct: 59 tatatatgaacgtgggaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 121 bits (61), Expect = 3e-27
Identities = 110/127 (86%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat--- 70
||||||| ||||||||||||||||||||||| |||||||| ||||||| |||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 63
Query: 71 ---tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||| |||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 64 aactcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
Query: 128 gtaagta 134
| |||||
Sbjct: 124 ggaagta 130
Score = 93.7 bits (47), Expect = 6e-19
Identities = 95/110 (86%), Gaps = 6/110 (5%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat-----tca-tt 75
||||||||||||||||||||||| |||||||| ||||||| |||| ||| | | ||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatgagtt 64
Query: 76 aacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||| |||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 63 aacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 119 bits (60), Expect = 1e-26
Identities = 89/98 (90%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt--gattcattaaca 79
||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacatttatatttagattcattaata 71
Query: 80 tcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||| || || |||||||||| |||||||||
Sbjct: 72 tcaatatgaatatgagaaatgctagaatgacttacatt 109
Score = 63.9 bits (32), Expect = 6e-10
Identities = 100/122 (81%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattg--attc 72
|||||| ||||||||| ||||||||||||| |||||||| || ||| |||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 73 attaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaag 132
|| || | ||||| ||||||| | |||||||||| ||||| ||||| ||||| || |||
Sbjct: 66 atgaatctaaatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaag 7
Query: 133 ta 134
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 119 bits (60), Expect = 1e-26
Identities = 102/116 (87%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat--- 70
||||||| ||||||||||||||||| | ||| |||||||||||||||| ||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Query: 71 -tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||| | |||||| ||| ||||||||||| |||||
Sbjct: 69 atcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacg 14
Score = 111 bits (56), Expect = 3e-24
Identities = 103/117 (88%), Gaps = 4/117 (3%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattga--t 70
|||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgt 62
Query: 71 tcat--taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| || |||||||||||||||||||| | |||||| ||| | ||||||||| |||||
Sbjct: 63 taatgataacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacg 119
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 115 bits (58), Expect = 2e-25
Identities = 99/112 (88%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatacat 64
Query: 75 ta-acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| |||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 65 gatgtatcaatatgaatgtggnaaatgctagaataacttacattgtgaaacg 116
Score = 107 bits (54), Expect = 4e-23
Identities = 98/112 (87%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||||||||| ||| |||||||| ||||||| |||||||| |||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgatacat 66
Query: 75 ta-acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| |||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 65 catgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 115 bits (58), Expect = 2e-25
Identities = 110/128 (85%), Gaps = 6/128 (4%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatt------tatattg 68
|||||| ||||||||||||||||||||||| |||||||||||| ||| |||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatatatatat 71
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||| ||||||||||||| || |||||||||| ||||||||||| ||||| ||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 129 taagtact 136
|||||||
Sbjct: 10 gaagtact 3
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattg 68
|||||| | ||||||||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattg 58
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 112/132 (84%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattga--- 69
|||||||| ||||||||||||||||||||||| | |||||||||||||| |||||||
Sbjct: 3 agtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Query: 70 -------ttcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaa 122
||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||
Sbjct: 63 atcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 122
Query: 123 acgaagtaagta 134
||| || |||||
Sbjct: 123 acggaggaagta 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 127 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgat 79
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 113 bits (57), Expect = 7e-25
Identities = 99/112 (88%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatacat 64
Query: 75 ta-acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| |||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 65 gatgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 116
Score = 113 bits (57), Expect = 7e-25
Identities = 99/112 (88%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||| |||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatacat 66
Query: 75 ta-acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| |||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 65 catgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 111 bits (56), Expect = 3e-24
Identities = 95/110 (86%), Gaps = 10/110 (9%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtcattatagcattttccacatttatattgat----------tcat 74
|||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 11 gtttcacaatataagtcattatagcattttccacattcatattgatgttaatagattcat 70
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
|||||||||||||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 71 taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 73.8 bits (37), Expect = 6e-13
Identities = 99/120 (82%), Gaps = 10/120 (8%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat---- 70
|||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 71 -----tc-attaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
|| |||||||||||||||||||||| | |||||| ||| ||||| ||||| ||||
Sbjct: 70 atgaatctattaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 109 bits (55), Expect = 1e-23
Identities = 102/118 (86%), Gaps = 5/118 (4%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat-----tcatta 76
||||||||| ||||||||||||| |||||||||||| ||| |||||||| ||||||
Sbjct: 122 tccgtttcataatgtaagtcattctagcattttccatattcatattgatgtaattcatta 63
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
|||||||||||||| ||| | |||||||||| ||||||||||| ||||| || |||||
Sbjct: 62 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/101 (85%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat-----tcatta 76
||||||||||||||||||||||| |||||||||||| ||| |||||||| | | |
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatt 71
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| ||| | |||||||||| |||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacatt 112
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 92/104 (88%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattcattaacatc 81
||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatat---ttcattaacatc 68
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| ||| ||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 69 agtataaatgtgggaaatgctagaatgacttagattgtgaaacg 112
Score = 85.7 bits (43), Expect = 2e-16
Identities = 103/121 (85%), Gaps = 3/121 (2%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||| ||||||||| |||||||| ||||||||||| |||| |
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgat--gt 64
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||| ||||||||||||||| |||||| ||| ||||||||||| ||||| || |||||
Sbjct: 63 taa-tgaaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Query: 135 c 135
|
Sbjct: 4 c 4
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 105 bits (53), Expect = 2e-22
Identities = 104/120 (86%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| || |||||||||||||||||||| ||||| || ||||||| ||||||| ||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattga-tcat 65
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
|||||||||||||||||||| | ||||| ||| ||||||||| | ||||| || |||||
Sbjct: 64 taacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 91/104 (87%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattcattaa-cat 80
||||||||| ||||||||||||| ||||| |||||||||| |||||||| |||| ||
Sbjct: 12 tccgtttcataatgtaagtcattttagcactttccacattcatattgat--gttaatgat 69
Query: 81 caatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
|||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 70 caatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 101 bits (51), Expect = 3e-21
Identities = 102/121 (84%), Gaps = 10/121 (8%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattca 73
||||||| ||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacatt----------ca 53
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagt 133
||||||||||||||||||| ||| |||||||||| ||||||||||| ||||| || ||||
Sbjct: 54 ttaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagt 113
Query: 134 a 134
|
Sbjct: 114 a 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| | ||||| ||||||||
Sbjct: 107 tccgtttcacaatgtaagtcattctagcatttcctacattcatattgat 59
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 109/131 (83%), Gaps = 11/131 (8%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat---- 70
|||||| ||||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttg 76
Query: 71 -------tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaa 123
||||| |||||||||||||||||||| |||||||||| ||||||||||| |||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 124 cgaagtaagta 134
|| || |||||
Sbjct: 15 cggaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 90/107 (84%), Gaps = 11/107 (10%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat-tcatt----- 75
||||||||||||||||||||||| |||||||| ||||||| |||||||| ||| |
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatc 71
Query: 76 -----aacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 72 tagacaacatcaatatgaatgtgggaaatgctagaatgacttacatt 118
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 97.6 bits (49), Expect = 4e-20
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 67 tgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacga 126
|||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 72 tgattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 127 agtaagta 134
|| |||||
Sbjct: 12 aggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 65 attgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
||||||||||||||||||||||||||||| || |||||||||| | ||||||||| ||||
Sbjct: 72 attgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaac 131
Query: 125 g 125
|
Sbjct: 132 g 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 97.6 bits (49), Expect = 4e-20
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 59 atttatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattg 118
|||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 83 atttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 142
Query: 119 taaaacgaagtaagta 134
| ||||| || |||||
Sbjct: 143 tgaaacggaggaagta 158
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||| | |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 14
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 103
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 95.6 bits (48), Expect = 2e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 91 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 148
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 160 tagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 102
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/112 (84%), Gaps = 8/112 (7%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt--------gattca 73
||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatctagattca 71
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||| ||| ||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 72 ttagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 123
Score = 79.8 bits (40), Expect = 9e-15
Identities = 107/129 (82%), Gaps = 8/129 (6%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattc- 72
||||||| ||||||||||||| ||||||||| |||||||| ||||||| ||||| || |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 73 -attaac------atcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|| || |||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 73 aatgaatctagatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 126 aagtaagta 134
|| |||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| |||||||| ||||||| ||||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgat 91
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||| ||| ||| | |||||| ||| ||||||||||| |||||
Sbjct: 80 gattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 83 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 140
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 94
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/112 (84%), Gaps = 8/112 (7%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt--------gattca 73
||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||
Sbjct: 125 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatctagattca 66
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||| ||| ||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 65 ttagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
Score = 79.8 bits (40), Expect = 9e-15
Identities = 107/129 (82%), Gaps = 8/129 (6%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattc- 72
||||||| ||||||||||||| ||||||||| |||||||| ||||||| ||||| || |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 73 -attaac------atcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|| || |||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 64 aatgaatctagatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 123
Query: 126 aagtaagta 134
|| |||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/112 (85%), Gaps = 9/112 (8%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt--------gattca 73
||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtttagattca 65
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 64 -taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Score = 89.7 bits (45), Expect = 1e-17
Identities = 107/127 (84%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat-tca 73
|||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||| | |
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
Query: 74 ------ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
| ||||||||||||||| ||| | |||||||||| ||||||||||| ||||| |
Sbjct: 65 tgaatctaaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 124
Query: 128 gtaagta 134
| |||||
Sbjct: 125 ggaagta 131
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 106/126 (84%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt------g 68
|||||| ||||||||||||||||||||||| | | |||||||||||| ||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgtag 64
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
|||||||||||||||||||||||||| | || ||| ||| ||||| ||||| ||||| ||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 129 taagta 134
|||||
Sbjct: 125 gaagta 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| ||| |||||||||||| ||||||||
Sbjct: 123 tccgtttcacaatataagtcattttagtattttccacattcatattgat 75
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 93.7 bits (47), Expect = 6e-19
Identities = 103/121 (85%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattca 73
||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat--g 61
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagt 133
||||||||||||| ||| || || |||||| ||| ||||| ||||| ||||| || ||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 134 a 134
|
Sbjct: 122 a 122
Score = 83.8 bits (42), Expect = 6e-16
Identities = 89/104 (85%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattcattaacatc 81
||||||||||||| ||||||||| |||||||| || |||||||||||| ||||||||
Sbjct: 115 tccgtttcacaatataagtcattttagcatttctcatatttatattgat--gttaacatc 58
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||| ||| || || |||||| ||| ||||||||||| |||||
Sbjct: 57 aatataaatatgagaaatgctaaaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 93.7 bits (47), Expect = 6e-19
Identities = 110/134 (82%), Gaps = 13/134 (9%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat--- 70
||||||| |||||||||||| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtt 79
Query: 71 ----------tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgta 120
|||||| ||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 78 aataaaagattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 121 aaacgaagtaagta 134
||||| || |||||
Sbjct: 18 aaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 96/117 (82%), Gaps = 13/117 (11%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat----------- 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatc 71
Query: 71 --tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| |||||||||||||||||||||||| |||||||||| |||||| |||| |||||
Sbjct: 72 ttttattaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacg 128
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
|||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatt 57
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 103
Score = 52.0 bits (26), Expect = 2e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 73 attaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||| || ||||||||||||| | |||||| ||| ||||||||||| |||||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttacattgtgaaacg 14
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 6e-19
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 48.1 bits (24), Expect = 3e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
||||||||||| |||| | |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggaggaagtac 141
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 6e-19
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||| || |||||| |||||||||| ||||| ||||| ||||| |
Sbjct: 90 gattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacgga 149
Query: 128 gtaagta 134
| |||||
Sbjct: 150 ggaagta 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| |||||||| |||| |||||||||||
Sbjct: 149 tccgtttcacaatataagtcattctagcatttcccacgtttatattgat 101
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
|||||||||||||||||||||||||||| || |||||| ||||||||||| ||||| ||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 129 taagta 134
|||||
Sbjct: 153 gaagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| || |||| ||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctaatatttcccacattcatattgat 103
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 6e-19
Identities = 108/128 (84%), Gaps = 8/128 (6%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat--tc 72
|||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 73 atta------acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacga 126
|| | |||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct: 65 atgaatctagacatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgg 124
Query: 127 agtaagta 134
|| |||||
Sbjct: 125 aggaagta 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 88/106 (83%), Gaps = 8/106 (7%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt--------gattca 73
|||||||||||||||||| |||| |||||||| ||||||| ||||| ||||||
Sbjct: 125 tccgtttcacaatgtaagacattctagcatttcccacattcatattgatgtctagattca 66
Query: 74 ttaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||| ||||||||| ||| ||||| |||||| ||| |||||||||||
Sbjct: 65 ttagcatcaatataaatatgggaaatgctataatgacttacattgt 20
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 91.7 bits (46), Expect = 2e-18
Identities = 96/115 (83%), Gaps = 11/115 (9%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat----------- 70
||||||||||||| ||||||||| |||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacattcatattgatgttatctagat 71
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||| ||| |||||| ||||| ||||| |||||
Sbjct: 72 tcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacg 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
|||||||||||||||||||| | |||||||||| ||||| ||||| ||||| || |||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 91.7 bits (46), Expect = 2e-18
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 139
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 151 tagtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatttatatt 57
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 91.7 bits (46), Expect = 2e-18
Identities = 108/131 (82%), Gaps = 11/131 (8%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt------- 67
|||||| ||| ||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatattatatatg 64
Query: 68 ----gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaa 123
|||||||||| || ||||||||||||||| |||||||||| ||||||||||| |||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 124 cgaagtaagta 134
|| || |||||
Sbjct: 125 cggaggaagta 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 128 tccgtttcacaatgtaagtcattctagcatttcccacattcatatt 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgt 119
||||||||||||||| |||||||||| |||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgt 20
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattga 69
||||||||||||||||||||||| |||||||| ||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattga 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| ||| |||| ||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgat 103
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| ||||||||||||||| ||| |||||||||| ||||| ||||| |||||
Sbjct: 86 gattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacg 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| |||||||| | ||||| ||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgat 97
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 90 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| |||||| |||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgat 101
Score = 71.9 bits (36), Expect = 2e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
|||||||||||||||||||||||| | | |||||||||| |||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgt 20
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| |||||||||||||||| |||||||||| ||||| ||||||||
Sbjct: 12 tccgttccacaatgtaagtcattctagcattttctacattcatattgat 60
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 91
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||| ||| ||| | |||||||||| ||||||||||| |||||
Sbjct: 80 gattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 70 ttcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 136
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||||||| | |||||||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| |||||||||||||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacattcatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgat 91
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Score = 83.8 bits (42), Expect = 6e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 63 atattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
|||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 75 atatagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Score = 77.8 bits (39), Expect = 4e-14
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| |||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 139 tccgttccacaatgtaagtcattctagcatttcccacattcatattgat 91
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgat 97
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcacatttacattgat 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
|||||||| ||||||| | |||||| || |||||| ||| ||||||||||| ||||| ||
Sbjct: 70 attcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggag 11
Query: 129 taagtac 135
||||||
Sbjct: 10 gaagtac 4
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgat 84
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||| ||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 62 tatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaa 121
||||| |||| |||||||||||||| | ||||| | |||||||||| ||||||||||| |
Sbjct: 67 tatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtga 126
Query: 122 aacg 125
||||
Sbjct: 127 aacg 130
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 103
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Score = 58.0 bits (29), Expect = 3e-08
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| |||| |||||||||||| |||||||||| || |||||||| ||||| |
Sbjct: 71 gattcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||||||||||||| |||||| ||||||| |||||||| ||||
Sbjct: 12 tccgtttcacaatgtatgtcattctagcattgtccacattcatat 56
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 94/116 (81%), Gaps = 12/116 (10%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat----------- 70
||||||||||||| ||||||||| |||||||| ||||||| ||||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacattcatattgatatttatctaaa 70
Query: 71 -tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
| ||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||
Sbjct: 69 tttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 105/126 (83%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt------g 68
|||||| ||| ||||| ||||||||||||| |||||||| |||||| ||||| |
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatttgtctag 71
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||||||||||||||||| || || ||||||| ||||||||| | ||||| ||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggag 11
Query: 129 taagta 134
|||||
Sbjct: 10 gaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| ||| |||| |||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagtatttctcacattcatattgat 60
Score = 50.1 bits (25), Expect = 8e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||| || |||||||||| |||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacatt 113
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 96/116 (82%), Gaps = 12/116 (10%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat----------- 70
||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatctatctaga 71
Query: 71 -tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||| ||| |||||| ||||||||||| |||||
Sbjct: 72 ttcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgat 81
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 79 atcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
|||||||||||| ||||| |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 87.7 bits (44), Expect = 4e-17
Identities = 108/128 (84%), Gaps = 5/128 (3%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattt----tccacatttatattg 68
|||||| | ||||||||||||||||||||||| |||||||| || | | | || | |
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcatttcgaatctagact-atctag 61
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||||||||||||||||| || |||||||||| ||||| ||||| ||||| ||
Sbjct: 62 attcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 121
Query: 129 taagtact 136
|||||||
Sbjct: 122 gaagtact 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| | ||||||||||||| ||||||||| |||||||| |||||| ||||||||
Sbjct: 130 tagtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgat 72
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 98 atgctagaatnacttacattgtaaaacgaagtaagtact 136
|||||||||| ||||||||||| ||||| || |||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagtact 3
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||
Sbjct: 73 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 142 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 84
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 96/117 (82%), Gaps = 14/117 (11%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt------- 67
|||||| ||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 68 -------gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||| ||||||||||||||||||| |||||||||| |||||||||
Sbjct: 65 atgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacatt 121
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| ||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattg 68
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattg 58
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||||||||| ||||||||||||| | ||||| ||||||| ||||||||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgat 103
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||| ||||||||||||||||||| ||| | |||| |||||||||
Sbjct: 92 gattcattaccatcaatatgaatgtgggaaatggtggaatgacttacatt 141
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| ||| |||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacattcatattgat 60
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttc 55
||||||||||||||||||||||| ||||||||||
Sbjct: 136 tccgtttcacaatgtaagtcattctagcattttc 103
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaa 89
||||||||||||||||||||||
Sbjct: 84 gattcattaacatcaatatgaa 105
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 96 gattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacg 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||| ||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgat 107
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattt 53
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 50.1 bits (25), Expect = 8e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 84 tatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
||||||| || || |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 55 tatgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgat 103
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgat 60
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||||||||||| | ||| |||||| ||||||||||| |||||
Sbjct: 92 gattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacg 149
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||| ||||| |||||||||| ||||||||| | ||||| |
Sbjct: 74 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacgga 133
Query: 128 gtaagta 134
| |||||
Sbjct: 134 ggaagta 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 74 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Score = 79.8 bits (40), Expect = 9e-15
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 73 attaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaag 132
|||||||| ||||||||||||||| |||||||||| ||||||||||| ||||| || |||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 133 tac 135
|||
Sbjct: 6 tac 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||| ||||||||| |||||||| ||||||| ||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 85
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattg 68
|||||| ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattg 58
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||| |||||| ||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 58.0 bits (29), Expect = 3e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
|||||||||| ||||||||||||||| | |||||||||| ||||| |||||
Sbjct: 92 gattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgt 143
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgat 97
Score = 73.8 bits (37), Expect = 6e-13
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtact 136
|||||||||||||||||| | |||||||||| ||||||||||| ||||| || |||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtact 3
Score = 71.9 bits (36), Expect = 2e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||| | | |||||||| ||||||||||| |||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacg 143
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 6e-16
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 70 ttcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagt 129
||||||||||||||||||||||||||| |||||||||| |||| |||||| ||||| ||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 130 aagta 134
|||||
Sbjct: 9 aagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||||||| |||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgcaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 83.8 bits (42), Expect = 6e-16
Identities = 88/105 (83%), Gaps = 9/105 (8%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||| ||||||||| |||||||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat---- 60
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 61 -----tcaatatgaatgtgggaaatgctagaatgacttatattgt 100
Score = 73.8 bits (37), Expect = 6e-13
Identities = 83/100 (83%), Gaps = 9/100 (9%)
Strand = Plus / Minus
Query: 26 tttcacaatgtaagtcattatagcattttccacatttatattgattcattaacatcaata 85
||||||||| ||||||||| |||||||| ||||||| ||||||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga---------atcaata 54
Query: 86 tgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 53 tgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgat 85
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||| | |||||||||| ||||| ||||| |||||
Sbjct: 74 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattga 69
|||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 54.0 bits (27), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 80 tcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| || |||||| |||||||||| ||||||||||| |||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||| ||||||||||||||| ||||||||| |||||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
|||||||||| |||||||||||||||||| |||||||||| |||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgt 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||| ||||||||| |||| | ||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| | |||||| ||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatttttgcatttcccacatttatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||| ||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgat 103
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 2e-15
Identities = 105/127 (82%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttata------tt 67
||||||| ||||||| ||||||||||||||| ||| |||| ||||||||||| |
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatatctatcta 63
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||||||||| | ||| | |||||| ||| ||||||||||| ||||| |
Sbjct: 64 gattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacgga 123
Query: 128 gtaagta 134
| |||||
Sbjct: 124 ggaagta 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcatttt 54
||||||||||||||||||||||| |||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattttagcatttt 91
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgat 60
Score = 73.8 bits (37), Expect = 6e-13
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 62 tatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaa 121
||||| ||||||||||||||||||| | ||||| | |||||||||| ||||||||||| |
Sbjct: 77 tatatagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtga 18
Query: 122 aacg 125
||||
Sbjct: 17 aacg 14
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 81.8 bits (41), Expect = 2e-15
Identities = 99/120 (82%), Gaps = 9/120 (7%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||||||||||||| |||||| | || | |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatat---------atctagattcat 55
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||| |||||||||||||||||| |||||||||| ||||||||| | ||||| || |||||
Sbjct: 56 taatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 108 tccgtttcataatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 2e-15
Identities = 100/120 (83%), Gaps = 10/120 (8%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgattcat 74
|||||| ||||||||||||| ||||||||| ||||| |||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat---- 59
Query: 75 taacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||||||| |||||||||| ||||| ||||| ||||| || |||||
Sbjct: 60 -----tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/104 (82%), Gaps = 10/104 (9%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattcattaacatc 81
||||||||||||| ||||||||| |||||||| ||||||| ||||||| |||
Sbjct: 107 tccgtttcacaatataagtcattctagcatttcccacattcatattga---------atc 57
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||| ||| |||||||||| ||||| ||||| |||||
Sbjct: 56 aatatgaatgt-ggaaatgctagaatgacttatattgtgaaacg 14
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||||||||| |||||| | |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||| |||||||||||||||| || ||||||| ||||||||||| |||||
Sbjct: 92 gattcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacg 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacatccatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattg 68
|||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattg 105
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 109/132 (82%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatt----tatatt--- 67
|||||| ||||||||| ||||||||||||| || ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatatatattcat 64
Query: 68 ---gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
||||||||||||| ||||||||| ||| | ||||||||| ||||||||||| ||||
Sbjct: 65 ctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaac 124
Query: 125 gaagtaagtact 136
| || |||||||
Sbjct: 125 ggaggaagtact 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
|||||| | |||||||||||||||||||| || |||||||||||| ||| |||||
Sbjct: 136 agtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatatt 82
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 79.8 bits (40), Expect = 9e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaa 131
||||||||||||||||||||||||| |||||||||| ||||||||| | ||||| || ||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 132 gta 134
|||
Sbjct: 127 gta 129
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 122 tccgtttcataatgtaagtcattctagcatttcccacattcatattgat 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagt 40
|||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 90
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||| | |||||||||| ||||||||||| |||||
Sbjct: 79 gattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttctcacatttatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||| |||||||||||||| |||||| || |||||||||| |||||||||
Sbjct: 71 gatttattaacatcaatataaatgtgagaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgat 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Score = 50.1 bits (25), Expect = 8e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||| | |||||| ||| ||||| ||||| |||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacg 130
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgat 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||| ||| ||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgat 60
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| |||||||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaacg 14
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||||||| ||| ||||||||
Sbjct: 145 tccgtttcacaatgtaagtcattctagcattttccatattcatattgat 97
Score = 71.9 bits (36), Expect = 2e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||| |||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Score = 63.9 bits (32), Expect = 6e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
|||||||||||||| ||| | |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtac 153
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgat 60
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattga 69
|||||| ||| ||||| ||||||||||||| ||| ||||| |||||| |||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||||||| | |||||||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 79.8 bits (40), Expect = 9e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 70 ttcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
|||||||||||||||||||||||| || |||||||||| ||||||||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| |||||||||||||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacattcatattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| || |||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgat 94
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttcca 57
|||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttcca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 88 aatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| | |||||||||| ||||||||||| |||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacg 107
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 107
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||| |||| |||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttc 55
|||||| ||||||||||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttc 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| |||| |||||||| | | | ||| |||||| ||||||||||| |||||
Sbjct: 71 gattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 11 ttagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 1 ttagtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||||||||||||| ||| |||||| ||||||||||| |||||
Sbjct: 71 gattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacg 14
Score = 58.0 bits (29), Expect = 3e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||| || |||||||||| ||||||||||| ||||| || |||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatat 107
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| ||||||||||||||||||| |||||| ||| ||||||||||| ||||| |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcat-tatagcattttccacatttatattgat 70
|||||| |||||||||||||||||||||| | |||||||| ||||||| ||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgat 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 72 cattaacatcaatatgaatgtgggagatgctaga-atnacttacattgtaaaacg 125
||||| ||||||||||||||||||| |||||| | || ||||||||||| |||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacg 134
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 79.8 bits (40), Expect = 9e-15
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 aacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||||||||||| |||||||||| ||||||||||| ||||| || |||||
Sbjct: 86 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| |||||||||||||||||| |||| |||||||| ||||||| ||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgat 60
Score = 75.8 bits (38), Expect = 1e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||| ||||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacg 14
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 137 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 89
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 107
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||| | |||||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||| | |||||||||||||| ||| |||||| |||||||||
Sbjct: 71 gattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||||||| || ||||||||||||| || ||||| ||||||| ||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatat 56
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| ||||||||||||||||||| |||||| ||| ||||||||||| ||||| |
Sbjct: 77 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 136
Query: 128 gtaagta 134
| |||||
Sbjct: 137 ggaagta 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 136 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgat 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcat-tatagcattttccacatttatattgat 70
|||||| |||||||||||||||||||||| | |||||||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgat 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 72 cattaacatcaatatgaatgtgggagatgctaga-atnacttacattgtaaaacg 125
||||| ||||||||||||||||||| |||||| | || ||||||||||| |||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacg 14
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 11 ttagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 1 ttagtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||||||||||||| ||| |||||| ||||||||||| |||||
Sbjct: 71 gattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgatt 71
|||||| ||||||||||||||||||||||| ||| ||||| |||||| |||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatt 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| ||||||||||||||| | || ||||||| ||||||||||| |||||
Sbjct: 92 gattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacg 149
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||| |||||||||||||||||||| ||| |||||| ||||||||||| ||||| |
Sbjct: 71 gattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||| |||||||||||||||||||| |||||||||| |||||||||
Sbjct: 86 gattcattgacatcaatatgaatgtgggaaatgctagaatgacttacatt 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 97
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctatcatttcccacattcatattgat 60
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||| | ||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| || | |||||||||| ||||||||||| |||||
Sbjct: 93 attcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacg 149
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||| |||| |||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgat 103
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| | | ||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcctatattcatattgat 60
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacg 14
Score = 71.9 bits (36), Expect = 2e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||| ||||||||||||||| |||||| ||| ||||| ||||| ||||| |
Sbjct: 92 gattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgga 151
Query: 128 gtaagta 134
| |||||
Sbjct: 152 ggaagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 151 tccgtttcacaatataagtcattttagcatttcccacattcatatt 106
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 65
|||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 23 ccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||| ||||||||| |||||||||| ||||||||||| |||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 56.0 bits (28), Expect = 1e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||| ||||||||| |||||||||| ||||||||||| |||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacg 97
Score = 54.0 bits (27), Expect = 5e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 88 aatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| |||||||||| ||||||||||| |||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacg 140
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 9e-15
Identities = 104/126 (82%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatt------tatattg 68
|||||| ||||||||||||| ||||||||| |||||||| ||||||| ||| | |
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatctatctag 64
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||||||||||||||||| | ||| |||||| |||||||| | ||||| ||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 129 taagta 134
|||||
Sbjct: 125 gaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacg 14
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/56 (92%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgat 103
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgat 60
Score = 60.0 bits (30), Expect = 9e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 62 tatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaa 121
||||| |||| |||||||||||||| |||||| | |||||||||| ||||||||||| |
Sbjct: 86 tatatagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtga 143
Query: 122 aacg 125
||||
Sbjct: 144 aacg 147
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||| ||||||||| |||||||| ||||||| ||||||||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 103
Score = 58.0 bits (29), Expect = 3e-08
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 59 atttatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattg 118
|||||| | ||||||||||||| ||||||||||||| | | | |||||| ||||| ||||
Sbjct: 80 atttatctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattg 21
Query: 119 taaaacgaagtaagta 134
| ||||| || |||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||| ||||||||| || | ||||||||||| |||||
Sbjct: 12 tccgtttcacaatataagtcattctaactttttccacattcatatt 57
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||| ||||||||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 103
Score = 63.9 bits (32), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 80 tcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacg 14
Score = 58.0 bits (29), Expect = 3e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattga 69
||||||||||||||||||||||| |||||| | |||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatntctcacattcatattga 59
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 89/105 (84%), Gaps = 7/105 (6%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt-gattcattaacat 80
||||||||||||| ||||||||| |||||||| ||||||| ||||| |||| |||
Sbjct: 112 tccgtttcacaatataagtcattctagcatttcccacattcatattagatt------cat 59
Query: 81 caatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| ||||| |||||||||| ||||| ||||| |||||
Sbjct: 58 caatatgaatatgggaaatgctagaatgacttatattgtgaaacg 14
Score = 69.9 bits (35), Expect = 9e-12
Identities = 94/114 (82%), Gaps = 5/114 (4%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattcattaacatc 81
||||||||||||| ||||||||| |||||||| ||| ||| |||||||| || |
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatgaatcta---- 67
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
|||||||||||||| |||||||||| ||||| ||||| ||||| || ||||||
Sbjct: 68 -atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||| || ||| |||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacg 14
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttc 55
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttc 118
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| ||||| |||||| | | | |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattaatatcaacatgaatttagaaaatgctagaatgacttacattgtgaaacg 149
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||| |||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| |||||||| |||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
|||||| ||||||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 106
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcatt 52
||||||||||||||||||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| |||||
Sbjct: 90 gattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacg 147
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/56 (92%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgat 58
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgat 101
Score = 60.0 bits (30), Expect = 9e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 62 tatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaa 121
||||| |||| |||||||||||||| |||||| | |||||||||| ||||||||||| |
Sbjct: 75 tatatagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtga 18
Query: 122 aacg 125
||||
Sbjct: 17 aacg 14
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| |||||| |||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 92 gattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||| ||||||||||| || ||| || ||| ||||||| ||| |||||
Sbjct: 71 gattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacg 14
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||| ||||||||||| ||||||||||| || ||||| |||||| ||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatat 56
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/128 (82%), Gaps = 7/128 (5%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccac-------atttatat 66
||||||| ||||||||||||||||||||||| |||||||||| || || ||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttctactctcataatgaatat 63
Query: 67 tgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacga 126
|||||||||||||||||| || ||| | |||||||||| ||||||||||| |||||
Sbjct: 64 gaattcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgg 123
Query: 127 agtaagta 134
|| |||||
Sbjct: 124 aggaagta 131
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| ||||||||| ||| |||||||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctagcatttttcacgtttatattgat 76
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| ||||||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaa 131
|||| |||||||||||||| ||||| |||||||||| ||||||||||| ||||| || ||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 132 gta 134
|||
Sbjct: 140 gta 142
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 135 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 87
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 66 ttgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||| | |||||||||||| |||||| ||| ||||||||||| |||||
Sbjct: 73 ttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 126 aagtaagta 134
|| |||||
Sbjct: 13 gaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| ||||||||||| | |||||| ||| |||| ||||
Sbjct: 90 gattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcatt 139
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactt 112
||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 67.9 bits (34), Expect = 4e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactt 112
|||||||||||||||||||||||||| || |||||||||| ||||
Sbjct: 45 gattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 75.8 bits (38), Expect = 1e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 70 ttcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagt 129
||||||||||||||||| ||||||||| || ||||||| ||||||||||| ||||| ||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 130 aagta 134
|||||
Sbjct: 147 aagta 151
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 144 tccgtttcacaatgtaagtcattctagtatttcccacatttatattgat 96
Score = 65.9 bits (33), Expect = 1e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 70 ttcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||| || |||||| ||||| ||||| |||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacg 14
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| || |||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 75.8 bits (38), Expect = 1e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 84 tatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtact 136
||||||||||||| |||||||||| ||||||||||||||||| || |||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagtact 147
Score = 69.9 bits (35), Expect = 9e-12
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||||||||||||||| || || |||||||||| |||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgagaaatgctagaatgacttacatt 22
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||| | ||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 148 tagtacttcctccgttttacaatgtaagtcattctagcatttcccacatt 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||| ||||||||||||| |||||||| || ||| ||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgat 60
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||| ||||||||||||||||||||||| |||||||||| | ||| ||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgat 60
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| | | | |||||||||| ||||||||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactt 112
||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 45 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 1e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactt 112
||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgat 90
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
||||||||||||||||||| |||||| ||| ||||||||||| ||||| || ||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||| |||||||||||||| ||| || || |||||||||| ||||||||||| |||||
Sbjct: 79 gatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacg 136
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 101 tccgtttcacaatgtaagtcattctagcattttccacaattatat 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattt 53
||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 85 atgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| |||| |||||| ||| ||||||||||| |||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacg 14
Score = 44.1 bits (22), Expect = 5e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 98 atgctagaatnacttacattgtaaaacgaagtaagta 134
|||||||||| ||||||||||| ||||| || |||||
Sbjct: 72 atgctagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagta 130
||||||||||||||| |||||||| | |||||||||| ||||||||||| ||||| || |
Sbjct: 68 tcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggagga 9
Query: 131 agta 134
||||
Sbjct: 8 agta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacattcgtattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| |||||||||| | ||| ||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgat 103
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| ||||||||||||| | | | |||||||||| ||||| ||||| |||||
Sbjct: 92 gattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacg 149
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 98/119 (82%), Gaps = 6/119 (5%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt------gattcatt 75
||||||||||||||||||| ||| |||||||| |||||| |||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcatttctcacattcatatatgtctagattcatt 71
Query: 76 aacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
| | ||||||||||||||| |||||||||| ||||||||||| ||||| || |||||
Sbjct: 72 agtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 60.0 bits (30), Expect = 9e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
||||||||||| || |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 107/131 (81%), Gaps = 11/131 (8%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattt------tccacatttatatt- 67
|||||| ||||||||||||| ||||||||| |||||||| | |||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 68 ----gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaa 123
|||||||||| |||||| ||||||||||| |||||||||| ||||| ||||| |||
Sbjct: 65 atgagattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaa 124
Query: 124 cgaagtaagta 134
|| || |||||
Sbjct: 125 cggaggaagta 135
Score = 60.0 bits (30), Expect = 9e-09
Identities = 92/115 (80%), Gaps = 11/115 (9%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat----------- 70
||||||||||||| ||||||||| |||||||| ||||||| | ||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatc 69
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| |||||| |||||||| || |||||||||| ||||| ||||| |||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacg 14
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 73 attaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaag 132
|||||||||||||||||||||| | || ||| ||| ||||||||||| ||||| || |||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 133 ta 134
||
Sbjct: 6 ta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcatt 44
|||||| |||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||| |
Sbjct: 71 gattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
|||||| ||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatatt 106
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 92 gattcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacg 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||| ||||||||| |||||| ||| |||||| |||| ||||| |
Sbjct: 92 gattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacgga 151
Query: 128 gtaagtac 135
| ||||||
Sbjct: 152 ggaagtac 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 151 tccgtttcacaaagtaagtcattttagcatttcccacatttatattgat 103
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| |||||||||||| |||||||||| | |||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgat 60
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| ||||||||||| ||||||||| |||| | ||| |||||| |||| |||||
Sbjct: 71 gattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacg 14
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcacatt 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
|||||||||||| | ||||||||||||| |||| ||||| ||||| ||||| ||||| ||
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggag 11
Query: 129 taagta 134
|||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||| | |||||||||| | |||||||||| ||||||||||| |||||
Sbjct: 90 gattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaaacg 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||||||||| ||||||||| | |||||| |||||||
Sbjct: 12 tccgtttcacaatataagtcattctggcatttcccacatt 51
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgat 83
Score = 60.0 bits (30), Expect = 9e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||||||||| |||||| ||| |||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacatt 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactta 113
||||||||| ||||| ||||||||||| | |||||||||| |||||
Sbjct: 71 gattcattagcatcagtatgaatgtggaaaatgctagaatgactta 26
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgat 60
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 71.9 bits (36), Expect = 2e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| |||||||||||||||| || |||||||||| ||||| ||||| ||||| |
Sbjct: 69 gattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 128
Query: 128 gtaagta 134
| |||||
Sbjct: 129 ggaagta 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/106 (81%), Gaps = 11/106 (10%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat----------- 70
||||||||||||| ||||||||| |||||||| |||||| ||||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatc 69
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacat 116
|||||| |||||||||||||||| || |||||||||| ||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 23
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||| || | ||||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct: 71 gattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgat 103
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| |||||||||| ||||| || |||||| ||| ||||||||||| |||||
Sbjct: 92 gattcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacg 149
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| |||||||| |||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||| |||||| |||||||||| ||||||||||| |||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 50.1 bits (25), Expect = 8e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 90 tgtgggagatgctagaatnacttacattgtaaaacg 125
||||||| |||||||||| | |||||||||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacg 98
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||| ||||||||||||| |||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatat 56
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||| |||| |||||||||||| | |||||||||| |||||||||
Sbjct: 71 gattcattggcatcgatatgaatgtggaaaatgctagaatgacttacatt 22
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcatt 44
|||||| ||||||||| |||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcatt 129
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgat 102
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||
Sbjct: 70 gattcattaatatcaatatgaatgtggga-aaactagaataacttacattgtaaaacg 14
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||| | || |||||| ||||||||||| |||||
Sbjct: 91 gattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacg 148
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| ||| ||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgat 91
Score = 60.0 bits (30), Expect = 9e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||| ||||||||||||||| | | |||||||||| | ||||||||| |||||
Sbjct: 81 attcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacg 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| ||||||||| ||| || | || ||||||| ||||||||||| |||||
Sbjct: 71 gattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||| ||||||||||||| |||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatat 56
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||| |||| |||||||||||| | |||||||||| |||||||||
Sbjct: 71 gattcattggcatcgatatgaatgtggaaaatgctagaatgacttacatt 22
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacat 60
|||||| ||||||||| ||||||||||||| ||| ||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacat 113
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 71.9 bits (36), Expect = 2e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattg 118
||||||||| |||||||||||||||| || |||||||||| ||||||||||
Sbjct: 71 gattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattg 21
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
|||||| ||||||||||||||||||||||| || ||||| ||| |||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatatt 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||| ||||| ||| ||||| ||| |||||| ||||||||||| |||||
Sbjct: 91 gattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaacg 148
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||| |||||||||||||| |||||||| |||||| ||||||||
Sbjct: 12 tccgtttcgcaatgtaagtcattctagcatttctcacattcatattgat 60
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgat 103
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| ||||||||||||||||| | ||| |||||| ||||||||||| |||||
Sbjct: 92 gattcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacg 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| ||||||||||||||| || |||||||||| ||||| ||||| ||||| |
Sbjct: 71 gattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| |||||||| |||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttctcacattcatattgat 60
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||| ||||||||||||||| |||||| ||| ||||| ||||| ||||| |
Sbjct: 71 gattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| |||| |||| ||||||||| |||||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgat 103
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 12 tccgtttcacaatataagtcattgtagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| ||||||||| ||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||||||||||| | ||| |||||| ||||| ||| | ||||| |
Sbjct: 73 gattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacgga 132
Query: 128 gtaagta 134
| |||||
Sbjct: 133 ggaagta 139
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||| ||||||||| || ||||||||||||| ||||||||
Sbjct: 132 tccgtttcataatataagtcattctaacattttccacattcatattgat 84
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacat 60
||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 89 atgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||| |||||||||| ||||||||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacg 14
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| ||||||||||||||||| ||||| |||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||| |||| |||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 72 gattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||| || |||||||||| ||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 131 tccgtttcacaatgtaagtcattctagcatttctcacattcatatt 86
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
|||||||||||||||||||||| ||| | ||| |||||| ||||||||||| ||||| ||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 129 taagta 134
|||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| || ||||||||| ||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacattttccatattcatattgat 60
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||| |||||||||||||||||| || ||||||| |||||||||| |||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacg 149
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| |||||||||||||||||| |||| ||| |||| ||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgat 103
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttc 55
|||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttc 45
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||||||||||||||||||||| ||| || ||| |||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacatt 22
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgat 60
Score = 58.0 bits (29), Expect = 3e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||||||||||||||||||||||| | | | |||||||||| ||||| |||||
Sbjct: 80 gattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgt 131
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||||||||||||||||||||| ||| || ||| |||||||||
Sbjct: 80 gattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacatt 129
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgat 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||||||||||||||||||||||| | | | |||||||||| ||||| |||||
Sbjct: 71 gattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgt 20
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 69.9 bits (35), Expect = 9e-12
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgattc-at-taaca 79
||||||||||||||||||||||| |||||||| ||| | || ||| || || |||||
Sbjct: 119 tccgtttcacaatgtaagtcattctagcatttctcacgatgttaatgaatctatataaca 60
Query: 80 tcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||| ||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 59 tcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacg 14
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||| ||| |||||||| ||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgat 60
Score = 44.1 bits (22), Expect = 5e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 98 atgctagaatnacttacattgtaaaacgaagtaagta 134
|||||||||| ||||||||||| ||||| || |||||
Sbjct: 90 atgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||| ||||| |||||| ||| ||||| ||||| |||||
Sbjct: 83 gattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacg 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||| ||||||||| |||||||| ||| ||| ||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgat 94
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||||||| || |||||||||| ||||||||||| ||||| || |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcat 51
|||||| ||||||||||||||||||||| | ||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 69.9 bits (35), Expect = 9e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||||||||||||| || || ||| ||| ||||||||||| |||||
Sbjct: 81 gattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacg 138
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| || |||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||||||||||||||||||||| ||| |||| |||||| ||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgat 92
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||||| ||||||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacgga 12
Query: 128 gtaagtact 136
| |||||||
Sbjct: 11 ggaagtact 3
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||||| ||||||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacgga 12
Query: 128 gtaagtact 136
| |||||||
Sbjct: 11 ggaagtact 3
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||| |||||||||||||||| || |||||||||| |||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactta 113
||||||||| |||||||||||||||| || |||||||||| |||||
Sbjct: 59 gattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 32 aatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| |||||||| |||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgat 39
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnactt 112
||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnactt 112
||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactt 112
||||||||| ||||||||||||||||||| |||||||||| ||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaat 107
||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaat 85
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 88/108 (81%), Gaps = 10/108 (9%)
Strand = Plus / Plus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgatt 71
||||||||| ||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaactcattctagcatttctcacatt---------- 51
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||||| ||||||||||||||||||| |||||| ||| |||| ||||||
Sbjct: 52 cattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgt 99
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacatttatatt 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 72 cattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaa 131
||||||||| ||||| |||||| || |||||||||| ||||||||||| ||||| || ||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 132 gta 134
|||
Sbjct: 7 gta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
||||||||||||| |||||||||||||||| |||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||| ||||||||||||| ||||| ||||||||| || ||||||||||||
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgat 51
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattat 46
|||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattat 36
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 79 atcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
|||||||||||| ||||| |||||||||| ||||||||||| ||||| || |||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 130 tccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtc 41
|||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtc 31
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||||||| |||||||| ||| ||||| |||||||||||||||
Sbjct: 101 tccgtttcacaatgcaagtcattctagtatttttcacatttatattgat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcatt 44
|||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 102/125 (81%), Gaps = 4/125 (3%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata----ttgat 70
|||||| ||||||||| ||||||||||||| |||||||| |||||| |||| | |||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacatctatatatctagat 69
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagta 130
||| ||| || |||| |||||| || ||| |||||| ||||| ||| | |||||||| |
Sbjct: 68 tcactaatttccatataaatgtgagaaatgttagaatgacttatattatgaaacgaagga 9
Query: 131 agtac 135
|||||
Sbjct: 8 agtac 4
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 65.9 bits (33), Expect = 1e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 71 tcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagta 130
||||| |||||||||| |||||| || |||||||||| ||||| ||||||||||| || |
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 131 agta 134
||||
Sbjct: 90 agta 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| ||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 86 tccgttttacaatataagtcattctagcatttctcacatttatattgat 38
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 103/127 (81%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatatt------ 67
||||||| ||||||| ||||||||||||||| ||| |||| |||||| ||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatatctatcta 63
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||||||||| | ||| | |||||||||| ||||||||||| ||||| |
Sbjct: 64 gattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacgga 123
Query: 128 gtaagta 134
| |||||
Sbjct: 124 ggaagta 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||||||||||||| ||||||||| ||| | |||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttttcacgtatatattgat 75
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttata 65
||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 82 tccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 56.0 bits (28), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 88 aatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||| ||| |||||||||| ||||||||||| ||||| ||||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcatt 44
|||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||| ||||| ||||||||| || |||| |||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgat 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttccacat 60
|||||||| | ||||||||||| ||||||||| ||| ||||| |||||
Sbjct: 3 agtactcccttcgtttcacaatataagtcattctagtatttttcacat 50
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| |||||||||| |||||||||| | || ||||||||||||| ||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgat 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||||||||||||||||||||| | ||| |||| | |||||||| || |||||
Sbjct: 64 gattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacg 121
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagtattttccacatt 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 84 tatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||| | || ||||||| ||||||||||| ||||| || |||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcactttccacatt 51
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||||||||||| ||||| | |||||||||| ||||||||||| ||||| ||
Sbjct: 69 attcattaacatcaatatggatgtgaaa-atgctagaatgacttacattgtgaaacggag 11
Query: 129 taagtac 135
||||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttc 55
||||||||||||||||||||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttc 45
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| || |||||| ||| || ||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgat 76
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| |||||||||||| ||| | ||| |||||| ||||||||||| |||||
Sbjct: 65 gattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacg 122
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 6e-10
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| |||||||||||||||||| || ||||||| ||||| ||||| ||||| |
Sbjct: 71 gattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| ||| |||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttcccacattcatattgat 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| | ||||| ||||||| ||||||||
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgat 100
Score = 50.1 bits (25), Expect = 8e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 78 catcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||||||||||||| ||| | |||| |||||||||
Sbjct: 99 catcaatatgaatgtgggaaatggtggaatgacttacatt 138
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||||||||||||||||| ||| |||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| || |||||| ||||||||||||| || |||||| |||||||||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgat 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||||| || || ||||||| ||||||||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacg 14
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 63.9 bits (32), Expect = 6e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 84 tatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||| |||||||||| ||||||||||| ||||| || |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 88 tccgtttcacaatgtaagtcattctagcatttcccacatt 49
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattt 53
||||||| || |||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||| ||||| ||| ||||||||| |||||||||||| ||||||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgat 84
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacat 60
|||||| ||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||| |||||||||||||||||| ||||| |||||| ||| |||| |||||| ||||| |
Sbjct: 70 gatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacgga 129
Query: 128 gtaagta 134
| |||||
Sbjct: 130 ggaagta 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||||||||||| |||||||| |||||||| ||| ||| ||||||||
Sbjct: 129 tccgtttcacaatgcaagtcattttagcatttcccatattcatattgat 81
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 86 tgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagtac 135
||||||||||| || ||||||| ||||||||||| ||||| || ||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| ||||||||||| | |||||||||| |||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgtgcaatgctagaatgacttacatt 115
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||||| ||||| ||||||| |||||||||| ||||||||| | ||||| ||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 129 taagta 134
|||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| |||||||| |||| |||||||||| |||||||||
Sbjct: 92 gattcattaacatctatatgaatatgggtaatgctagaatgacttacatt 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| ||||||||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcatt 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcatt 52
||||||||| ||||||||||||| |||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||| |||| || |||||||||||||| |||||||||| |||||||||
Sbjct: 92 gattcactaacctccatatgaatgtgggaaatgctagaatgacttacatt 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 16 actccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||| ||||||||| ||||||||||||| |||||||| ||||||| ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatat 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattt 53
|||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 12 tagtactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||| ||||||||| ||||||||||||| ||||||| ||||||| ||||
Sbjct: 161 tagtactccctccgtttcataatgtaagtcattttagcattgcccacattcatat 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||| |||| ||||||||||||| |||||| ||| |||||||||
Sbjct: 92 gattcattaccatctatatgaatgtgggcaatgctaaaatgacttacatt 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||| || |||| | |||||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||||||| ||||||||||||| ||||| || ||||||| |||||||||
Sbjct: 70 gattcattagcatcaatatgaatatgggaaatactagaatgacttacatt 119
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
|||||| ||||||||| ||||||||||||| ||| |||| ||| ||| ||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgat 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 78 catcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||| || || || ||||||| ||||||||||| ||||| || |||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| |||||||||| || |||||||||| |||||||||
Sbjct: 71 gattcattaacatctatatgaatgttggtaatgctagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcatt 52
|||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 3 agtactccctccgtttcataatgtaagtcattctagcatt 42
Score = 54.0 bits (27), Expect = 5e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaag 128
||||||||||||| |||| ||||||| |||||||||| ||||||||| | ||||| ||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 129 taagta 134
|||||
Sbjct: 153 gaagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||| ||||||||||||| ||||||| |||||| |||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcattgcccacatatatat 107
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 65
|||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccacctttata 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattt 53
|||||| | ||||||| ||||||||||||| ||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcattt 108
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 61.9 bits (31), Expect = 2e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||| |||||||||| ||||||||||||| || ||||||| |||||||||
Sbjct: 78 gatttattaacatcactatgaatgtgggaaatactagaatgacttacatt 127
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||| ||||||||||||| ||||||||| |||||| ||| ||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttttcacattcatagtgat 60
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||| || |||||| ||||||||||||| ||| |||| ||||||| ||| ||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgat 89
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 104/128 (81%), Gaps = 8/128 (6%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccacatttata------tt 67
||||||| ||||||||| ||||||||||||| |||||||| ||||| |||| |
Sbjct: 129 gtactccctccgtttcataatgtaagtcattgtagcattt--cacatatatatctatcta 72
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||| ||||||||| ||| || || || ||||||| ||||| ||||| ||||| |
Sbjct: 71 gattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacgga 12
Query: 128 gtaagtac 135
| ||||||
Sbjct: 11 ggaagtac 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| ||| |||| || ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttctcatatttatattgat 60
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnactta 113
|||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaatgactta 26
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 61
|||||| ||||||||||||| ||||||||| ||| ||| |||||||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacatt 110
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| ||||||||||
Sbjct: 47 gattcattaacatctatatgaatgtgggtgatgctagaa 9
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||| ||||| ||||||||||| | ||||||||||
Sbjct: 68 gattcatttacatctatatgaatgtgtgtgatgctagaa 106
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||||||| ||| |||| ||||||| |||||
Sbjct: 102 tccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcatt 44
||||||| |||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||||| || ||| ||| ||||||||||| ||||| || |||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacattta 63
|||| ||||||||||||||| ||||||||| ||||||||| || |||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatattta 53
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||||||| ||||||||| || |||||| |||||| ||||
Sbjct: 123 tccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctag 104
|||||||| |||||||||||||||||||| |||||||
Sbjct: 52 gattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtggga 96
|||||||| ||||||||||||||||||||
Sbjct: 37 gattcattgacatcaatatgaatgtggga 9
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| ||||||||||| ||| ||||||||
Sbjct: 125 tccgtttcacaatataagtcattttagcattttccgtattcatattgat 77
Score = 54.0 bits (27), Expect = 5e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggagatgctagaatnacttacattgtaaaac 124
||||||||| |||| |||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||||||||||||||||| |||||||| || |||| ||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 62 tatattgattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaa 121
||||| |||||||||||||| ||||||||| ||| ||||||||| |||||||||| |
Sbjct: 86 tatatagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtga 145
Query: 122 aacg 125
||||
Sbjct: 146 aacg 149
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| |||||||||||||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 62 tatattgattcattaacatcaatatgaatgtgggagatgctagaa 106
||||| |||||||||||||| ||||||||||||| |||||||||
Sbjct: 77 tatatagattcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 94 gattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatattgat 70
||||||||||||| ||||||||| ||||||||| |||||| || |||||
Sbjct: 130 tccgtttcacaatataagtcattttagcatttttcacattcatgttgat 82
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattt 53
||||||||||||| ||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| |||||||||||||||||| | || ||||||| |||||||| ||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatat 89
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| |||||||||||||||||| | || ||||||| |||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||| ||||||||| |||||||||||| ||||||||| |||||||||| |||||
Sbjct: 74 gatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacg 131
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||| | ||||||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| |||||||| | || |||||||||| |||||||||
Sbjct: 92 gattcattaacatctatatgaatataggcaatgctagaatgacttacatt 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| ||||||||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattt 53
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 98 atgctagaatnacttacattgtaaaacgaagtaagtac 135
|||||||||| ||||||||||| ||||| || ||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagc 49
||||||| ||||||||||||||||||||||| ||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacat 60
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 12 tccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 48.1 bits (24), Expect = 3e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 89 atgtgggagatgctagaatnacttacattgt 119
|||||||| |||||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgt 20
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||| ||||||||| ||||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 68 gatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacgga 127
Query: 128 gtaagta 134
| |||||
Sbjct: 128 ggaagta 134
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||| |
Sbjct: 92 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 151
Query: 128 gtaagta 134
| |||||
Sbjct: 152 ggaagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtg 93
|||||||||||||| |||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||| | ||||||||| ||||||||| | ||||| |
Sbjct: 92 gattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacgga 151
Query: 128 gtaagta 134
| |||||
Sbjct: 152 ggaagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| |||||||| | || |||||||||| |||||||||
Sbjct: 71 gattcattaacatctatatgaatataggcaatgctagaatgacttacatt 22
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| ||||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtg 93
|||||||||||||| |||||||||||
Sbjct: 92 gattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||||||||||| || |||||| ||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 43 gattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtggg 95
|||||||||||||| |||||||||||||
Sbjct: 70 gattcattaacatccatatgaatgtggg 97
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||| ||||||||| |||||||||||| |||||||||| |||||||||
Sbjct: 71 gatttattaacatctatatgaatgtggacaatgctagaataacttacatt 120
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacatt 117
|||||||||||||| ||||| ||||||| |||||||||| | |||||||
Sbjct: 66 gattcattaacatctatatgcatgtgggcaatgctagaatgatttacatt 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcatt 52
||||||||| ||||||||||||| |||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||| ||||||||||||| || |||||| |||||||||| |||||
Sbjct: 92 gattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacg 149
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaag 39
||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaag 29
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattt 53
|||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 61
|||||| || |||||| ||||||||||||| ||||||||| ||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacatt 112
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 93 gattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttat 64
|||||||||||||||||| | || ||||||| |||||||||||
Sbjct: 149 tccgtttcacaatgtaagactttttagcattgtccacatttat 107
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
||||||||||||| ||||||||||||| |||||||||
Sbjct: 47 gattcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 60 gattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 74 gattcattaacatctatatgaatgtgggcaatgctagaa 112
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttat 64
||||||||||||| ||||||||| |||||||||| | ||||||
Sbjct: 82 tccgtttcacaatataagtcattctagcattttctatatttat 40
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcat 51
||||||||||| ||||||||||| ||||||
Sbjct: 12 tccgtttcacagtgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 61
|||||| ||||||| | ||||||||||||| || |||||||||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacatt 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| ||||||||| ||||||||||||| || ||||| |||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 44.1 bits (22), Expect = 5e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 77 acatcaatatgaatgtgggagatgctagaatnacttacatt 117
||||| ||||||||||| || ||| |||||| |||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacatt 22
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggagatgctagaatnacttacattgtaaaacgaagtaagta 134
||||||||||||||| || ||| ||| ||||||||||| ||||| || |||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatatt 67
||||||||||||||||||| ||| ||| |||| ||||||| |||||
Sbjct: 133 tccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaa 106
||||||||||||| ||||||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaac 124
|||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||
Sbjct: 71 gattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaac 15
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| |||||||||||||||||| | || |||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcatt 123
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 14 gtactccttccgtttcacaatgtaagtcattatagcattttccaca 59
||||||| |||||||||||||||||| | || ||||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaaggctttctagcattgtccaca 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttat 64
|||||||||||||||||| | || ||| ||| |||||||||||
Sbjct: 111 tccgtttcacaatgtaaggctttctagtattgtccacatttat 69
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgt 119
||||||||| ||||||||||||| || || ||| |||||| ||||| |||||
Sbjct: 92 gattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgt 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnactta 113
|||||||| ||||||||||||| ||| | || ||||||| |||||
Sbjct: 70 attcattagcatcaatatgaatatggaaaatactagaatgactta 26
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcattttcca 57
|||||||| |||||||||||||||||| | || ||||||| ||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgtcca 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||| | | ||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 71 gattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctag 104
|||||||||| ||||||||||| |||||| |||||||
Sbjct: 37 gattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctag 104
|||||||||| ||||||||||| |||||| |||||||
Sbjct: 55 gattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatttatat 66
||||||||| ||||||||||||| ||||||| || ||||| ||||
Sbjct: 129 tccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcatt 44
|||||| ||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcatt 34
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 66 ttgattcattaacatcaatatgaatgtgg 94
|||||||||||||||| ||||||||||||
Sbjct: 71 ttgattcattaacatctatatgaatgtgg 99
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
||||||||||||| ||||| ||||||| ||||||||| |||||||||| ||||| |
Sbjct: 71 gattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcatt 52
|||||| |||||||||||||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| ||||| ||||| | ||||||||| |||||||||| ||||| |
Sbjct: 92 gattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacgga 151
Query: 128 gtaagta 134
| |||||
Sbjct: 152 ggaagta 158
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| |||||||||||||||||| | || ||| ||| |||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatat 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgg 94
|||||||||||||| ||||||||||||
Sbjct: 92 gattcattaacatctatatgaatgtgg 118
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| | |||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 71 gattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcattttccacatt 61
|||||||||||||||||| | || ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattatccacatt 51
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcatt 52
|||||||| |||||||||||||||||| | || |||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacgaa 127
|||||||||||||| | |||||| |||| ||||||||| |||||||||| ||||| |
Sbjct: 71 gattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacgga 12
Query: 128 gtaagta 134
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 15 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatat 66
|||||| |||||||||||||||||| | || ||| ||| |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgg 94
|||||||||||||| ||||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgg 45
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaat 107
|||||||||||| | |||||||||||| | ||||||||||
Sbjct: 41 gattcattaacacctatatgaatgtggaaaatgctagaat 2
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaat 107
|||||||||||| | |||||||||||||| ||| ||||||
Sbjct: 62 gattcattaacacctatatgaatgtgggaaatgttagaat 101
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtggg 95
|||||||||||||| |||||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtggg 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtggg 95
|||||||||||||| |||||||||||||
Sbjct: 94 gattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 13 agtactccttccgtttcacaatgtaagtcattatagcatt 52
|||||||| |||||||||||||||||| | || |||||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtggg 95
||||||||||||| |||||||||||||
Sbjct: 77 attcattaacatctatatgaatgtggg 103
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 70 ttcattaacatcaatatgaatgtggga 96
||||||| |||||||||||||||||||
Sbjct: 35 ttcattagcatcaatatgaatgtggga 9
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 22 tccgtttcacaatgtaagtcattatagcatt 52
|||||||||||||||||| |||| |||||||
Sbjct: 130 tccgtttcacaatgtaagacattttagcatt 100
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
||||| |||||||| ||||||||||||| |||||||||
Sbjct: 71 gattcgttaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
||||||||| |||| ||||||||||||| |||||||||
Sbjct: 92 gattcattagcatctatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaat 90
|||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||| |||||||| |||| || |||||| |||||||||| |||||
Sbjct: 92 gattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacg 149
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgg 94
|||||||||||||| ||||||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
||||||||| |||| ||||||||||||| ||| ||||| |||||||||| |||||
Sbjct: 92 gattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacg 149
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 tccgtttcacaatgtaagtcattatagcatt 52
|||||||||||||||||| |||| |||||||
Sbjct: 12 tccgtttcacaatgtaagacattttagcatt 42
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||| ||||||| |||||||||
Sbjct: 70 gattcattaacatctatatgtatgtgggtaatgctagaa 108
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||| ||||||| |||||||||
Sbjct: 71 gattcattaacatctatatgtatgtgggtaatgctagaa 33
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgg 94
|||||||||||||| ||||||||||||
Sbjct: 92 gattcattaacatctatatgaatgtgg 118
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| ||||| ||||||| |||||||||
Sbjct: 81 gattcattaacatctatatgtatgtgggcaatgctagaa 119
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
||||||||||||| ||||||||||||| |||||||||
Sbjct: 66 gattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||||||||| ||||||||||| | ||||||| | |||||||||| |||||
Sbjct: 71 gattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacg 14
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
||||||||||||| ||||||||||||| |||||||||
Sbjct: 92 gattcattaacatatatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 68 gattcattaacatcaatatgaatgtgggagatgctagaa 106
|||||||||||||| | ||||||||||| |||||||||
Sbjct: 71 gattcattaacatctaaatgaatgtgggtaatgctagaa 33
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 69 attcattaacatcaatatgaatgtgggagatgctagaatnacttacattgtaaaacg 125
|||||||| ||| ||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 61 attcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaacg 117
