miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 133/144 (92%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 atagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgac 134
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 135 ttacattgtgaaacggaggaagta 158
Score = 167 bits (84), Expect = 7e-41
Identities = 133/148 (89%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| ||| ||||| |||||| | |||||||||
Sbjct: 158 tacttcctccg-tttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||| || | | |||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 144/158 (91%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || ||||| ||||| | ||||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcattttccacatccatattgatgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaa 122
Query: 133 tactagaatgacttatattgtgaaacggatgaagtata 170
||||||||||||||| ||||||||||||| | ||||||
Sbjct: 123 tactagaatgacttacattgtgaaacggagggagtata 160
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||||| | |||| ||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||||||||||||| |||||| |||| ||||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 184 bits (93), Expect = 3e-46
Identities = 126/137 (91%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| |||||||| |||||| | |||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatctaa 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 129 bits (65), Expect = 1e-29
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | | |||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 134/148 (90%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 158 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||| ||||
Sbjct: 99 aatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
Score = 167 bits (84), Expect = 7e-41
Identities = 129/144 (89%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| || ||| | ||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctat 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 75 acatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 135 ttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 134/148 (90%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || |||||| |||||| | ||| |||||
Sbjct: 158 tacttcctccg-tttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||| ||||||||| |||||||||||||
Sbjct: 39 gctataatgacttacattgtgaaacgga 12
Score = 159 bits (80), Expect = 2e-38
Identities = 128/144 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||| | |||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||||||| |||||||||||||||||| ||| ||||||
Sbjct: 75 acatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgac 134
Query: 145 ttatattgtgaaacggatgaagta 168
||||||||||||||||| ||||||
Sbjct: 135 ttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 170 bits (86), Expect = 4e-42
Identities = 125/137 (91%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| ||||| | |||||||||||| |||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 107 bits (54), Expect = 5e-23
Identities = 117/137 (85%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| | |||||| || ||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | | |||||| |||||||||||||| ||||| ||||| ||||||||||
Sbjct: 75 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 132
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 133 ttacattgtgaaacgga 149
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 170 bits (86), Expect = 4e-42
Identities = 125/137 (91%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| ||||| | |||||||||||| |||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 72
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 73 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 132
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 133 ttacattgtgaaacgga 149
Score = 107 bits (54), Expect = 5e-23
Identities = 117/137 (85%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| | |||||| || ||| | |||||||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 87
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | | |||||| |||||||||||||| ||||| ||||| ||||||||||
Sbjct: 86 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 127/141 (90%)
Strand = Plus / Minus
Query: 28 tcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctatata 87
||||||||||||| ||| || |||||| |||||| | |||||| |||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagata 86
Query: 88 gatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgactta 147
||||||||||||||||||||||||||||||||| |||||||||||| | | |||||||||
Sbjct: 85 gatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgactta 26
Query: 148 tattgtgaaacggatgaagta 168
||||||||||||| ||||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 153 bits (77), Expect = 1e-36
Identities = 132/149 (88%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| | |||||| |||||| | ||||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| | | |||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| ||||||||||||| ||||||| |||||
Sbjct: 123 tgctagaatgacttacattgtgatacgga 151
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 134/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||| ||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgacgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 63 taatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| ||| ||||||||| |||||||||||||
Sbjct: 123 ttctaaaatgacttagattgtgaaacgga 151
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || ||||| |||||| | ||||||| |||||||||||
Sbjct: 148 gtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 88 aaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||||||||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||||||||||||||||||||||| ||||| |||||| | | |||| ||||||||||
Sbjct: 75 atagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 113 bits (57), Expect = 9e-25
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| | ||| | ||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 124/137 (90%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||| ||||||| | |||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 153 bits (77), Expect = 1e-36
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| ||||||||| |||||| | |||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 75 acatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 134/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||| ||||| ||| || ||||||||||||| | ||||||
Sbjct: 4 gtacttcctccg-tttcacaatataagtcattctagcatttctcacattcatattgatac 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| |||||||||||| |||||||||||||
Sbjct: 123 tgttagaatgacttacattgtgaaacgga 151
Score = 151 bits (76), Expect = 4e-36
Identities = 127/144 (88%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| |||||||| |||||| | ||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||||
Sbjct: 88 acatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||||||||||||||||| ||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 140/157 (89%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| |||||| |||||| |||||| | ||| |||||
Sbjct: 5 tacttcctccg-tttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 134 actagaatgacttatattgtgaaacggatgaagtata 170
|||||||| |||||||||||||||||| | ||||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagggagtata 160
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| |||| ||| || ||||| ||||||| | ||||||| |||||||||||
Sbjct: 148 gtttcacaatataagccattctagcatttttcacatttatattgatgataatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||||||| |||||||||||||||||| ||| ||||||
Sbjct: 88 acatatatatctatctagattcattaacataaatatgaatgtgggaaatgctacaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||||||||||||||||| ||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 134/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||| |||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattttagcatttcccacattcatattagtgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| ||||||||||||| |||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacgga 151
Score = 127 bits (64), Expect = 6e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||| |||||| | ||| |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||||| |||||||||||||||||| ||| ||||||
Sbjct: 88 acatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 167 bits (84), Expect = 7e-41
Identities = 133/148 (89%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| |||| ||| |||||| | ||| |||||
Sbjct: 5 tacttcctccg-tttcacaatataagtcattctaactttttccacattcatattaatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 64 aatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttatattgtgaaacgga 151
Score = 143 bits (72), Expect = 1e-33
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || |||||| |||||| | |||||| ||||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||| |||||| | ||||||||||||||||| ||||||||||||| ||| |||||||||
Sbjct: 88 atatatatatttatctagattcattaacattaatatgaatgtggaaaaagttagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||||||||||||||||| ||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 167 bits (84), Expect = 7e-41
Identities = 133/148 (89%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||||||||||| | || |||
Sbjct: 158 tacttcctccg-tttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
|||||||||||| |||||||||||||
Sbjct: 39 gatagaatgacttacattgtgaaacgga 12
Score = 129 bits (65), Expect = 1e-29
Identities = 125/145 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 75 acatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaatgac 134
Query: 145 ttatattgtgaaacggatgaagtat 169
||| ||||||||||||| |||||||
Sbjct: 135 ttacattgtgaaacggaggaagtat 159
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 163 bits (82), Expect = 1e-39
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 catttctcacattcatattgatgttaatgaatctagatagatatatatgtctagattcat 72
Query: 109 taacatcaatatgaatgtgggaaatactagaatgactt 146
||||||||||||||||||||||||| ||||||||||||
Sbjct: 73 taacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 115 bits (58), Expect = 2e-25
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
|||||| |||||| | ||||||||||||||||||| | | |||||| | |||||||||||
Sbjct: 98 catttcccacattcatattgatgttaatgaatctagacatatatatctatctagattcat 39
Query: 109 taacatcaatatgaatgtgggaaatactagaatgactt 146
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 38 taacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 55 attgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaat 114
Query: 125 gtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||| |||| |||||||||||||
Sbjct: 115 gtgggaaatactagaatgtcttacattgtgaaacgga 151
Score = 97.6 bits (49), Expect = 5e-20
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
||||||||||||||| ||| || ||||| |||||| | |||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatttctagtgaaaatactagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 123/137 (89%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||
Sbjct: 75 atagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| ||| |||||||||
Sbjct: 135 ttacattatgaaacgga 151
Score = 137 bits (69), Expect = 6e-32
Identities = 120/137 (87%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| | |||||| |||||| | ||||||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 88 acatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 120/133 (90%)
Strand = Plus / Minus
Query: 29 cacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctatatag 88
|||||| ||||| ||| || ||||| ||||||| | |||||| |||||||||||| ||||
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatattgatattaatgaatctaaatag 85
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||
Sbjct: 84 atatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttac 25
Query: 149 attgtgaaacgga 161
|||||||||||||
Sbjct: 24 attgtgaaacgga 12
Score = 129 bits (65), Expect = 1e-29
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | | |||||||||||| ||||||||||||||| |||| ||||||||||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgac 134
Query: 145 ttatattgtgaaacgga 161
|||||||||| ||||||
Sbjct: 135 ttatattgtggaacgga 151
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 159 bits (80), Expect = 2e-38
Identities = 133/148 (89%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaat 122
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 123 gctagaatgacttacattgtgaaacgga 150
Score = 159 bits (80), Expect = 2e-38
Identities = 129/144 (89%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaa 88
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | || ||| || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 87 acatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 132/148 (89%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||| |||||| |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||| |||| |||||||||||||||||||||||||| ||||||||||||| | | ||||
Sbjct: 64 aatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttatattgtgaaacgga 151
Score = 113 bits (57), Expect = 9e-25
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
||||||| ||||||||||| | | |||||| | |||||| ||||||||||||||| ||||
Sbjct: 108 attgatgctaatgaatctagacatatatatctatctagagtcattaacatcaatacgaat 49
Query: 125 gtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
|||| |||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 48 gtggaaaatgctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 159 bits (80), Expect = 2e-38
Identities = 110/120 (91%)
Strand = Plus / Plus
Query: 51 tttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcatta 110
|||| |||||| | |||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 40 tttcccacattcatattgatattaatgaatctagatagatatatatgtctagattcatta 99
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||||||||||||||||| ||||| |||||||||||| ||||||||||||| | ||||||
Sbjct: 100 acatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagtata 159
Score = 129 bits (65), Expect = 1e-29
Identities = 120/137 (87%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| ||| |||| |||||| | |||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctag 88
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 87 acatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actagaataac 29
Query: 145 ttatattgtgaaacgga 161
||| ||||| |||||||
Sbjct: 28 ttacattgtaaaacgga 12
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 159 bits (80), Expect = 2e-38
Identities = 136/153 (88%), Gaps = 5/153 (3%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaat----tg 68
|||||||||||| ||||||||||||||| ||| || |||||| || ||| | | ||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcatttcgcatattcatacatagtg 62
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgg 122
Query: 129 gaaatactagaatgacttatattgtgaaacgga 161
||||| ||||||||||||| |||||||||||||
Sbjct: 123 gaaatgctagaatgacttacattgtgaaacgga 155
Score = 117 bits (59), Expect = 5e-26
Identities = 126/148 (85%), Gaps = 4/148 (2%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | | |||||||||||||||||
Sbjct: 152 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 93
Query: 85 atagatatatatgtctagattcattaacatca----atatgaatgtgggaaatactagaa 140
| | |||||| | ||||||||||||||||||| ||||||| || ||||| ||||||
Sbjct: 92 acatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgctagaa 33
Query: 141 tgacttatattgtgaaacggatgaagta 168
||||||| ||||||||||||| ||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 155 bits (78), Expect = 3e-37
Identities = 129/145 (88%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|||| |||| ||| |||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 75 ataggcatat--gtccagattcattaacatcaatataaacgtgggaaatgctagaatgac 132
Query: 145 ttatattgtgaaacggatgaagtat 169
||||||||||||||||| |||||||
Sbjct: 133 ttatattgtgaaacggaggaagtat 157
Score = 121 bits (61), Expect = 4e-27
Identities = 128/148 (86%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || |||||| ||| || | |||||||||
Sbjct: 156 tacttcctccg-tttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||||| | | || ||| |||||||||||||||||||||||||||||||||||
Sbjct: 97 aatgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 155 bits (78), Expect = 3e-37
Identities = 93/98 (94%)
Strand = Plus / Minus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
|||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 98 catttcccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcat 39
Query: 109 taacatcaatatgaatgtgggaaatactagaatgactt 146
||||||||||||||||||||||||| ||||||||||||
Sbjct: 38 taacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 115 bits (58), Expect = 2e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
|||||| |||||| | ||||||||||||||||||| | | |||||| | | |||||||||
Sbjct: 13 catttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcat 72
Query: 109 taacatcaatatgaatgtgggaaatactagaatgactt 146
||||||||||||||||||||||||| ||||||||||||
Sbjct: 73 taacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 155 bits (78), Expect = 3e-37
Identities = 139/158 (87%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| |||||||| |||||| ||| || |||||| |||||| | ||||||||
Sbjct: 159 gtacttcctccg-tttcacaaagtaagtcattttagcatttcccacatttatattgatgt 101
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 100 taatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaa 41
Query: 133 tactagaatgacttatattgtgaaacggatgaagtata 170
| | | ||||||||| |||||||||||| | ||||||
Sbjct: 40 tgcaaaaatgacttactttgtgaaacggagggagtata 3
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
||||||||| |||||| ||| | |||||| |||||| | ||||||||| |||||||||
Sbjct: 15 gtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||| | | ||||||||||||||||||||||| |||||||||||| ||| ||||||
Sbjct: 75 acatatatttctatctagattcattaacatcaatataaatgtgggaaatgctaaaatgac 134
Query: 145 ttatattgtgaaacggatgaagta 168
||| |||||||||||| ||||||
Sbjct: 135 ttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 132/149 (88%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || |||| | || ||| | || |||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcattacccatattcatatggatgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| | ||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 63 taatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| ||||||||||||| |||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacgga 151
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||||||||||| | ||| |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| ||||||||||||||||| |||||||| |||| ||| ||||||||||
Sbjct: 88 acatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 131/148 (88%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| | ||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcctatattcatattgatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || | ||
Sbjct: 64 aatgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacgga 151
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||| | | |||| | |||||||||||||||| ||
Sbjct: 148 gtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatatag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | ||||| | ||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 88 acatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||||||||| | ||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| ||||||||||||||| || | |||||||||||||||| ||||||||||
Sbjct: 88 acatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagtataa 171
||| ||||||||||||| |||||||||
Sbjct: 28 ttacattgtgaaacggaggaagtataa 2
Score = 135 bits (68), Expect = 2e-31
Identities = 129/148 (87%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | | | || ||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatacttatatt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | ||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 64 aatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
||| ||||||||| |||||||||||||
Sbjct: 124 gctaaaatgacttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 147 bits (74), Expect = 6e-35
Identities = 128/145 (88%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| ||||||| | | | |||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctag 87
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||| |||||||||||| |||||||||||| | |||||||||||||||| | ||||||||
Sbjct: 86 ata--tatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgac 29
Query: 145 ttatattgtgaaacggatgaagtat 169
||||||||||||||||| |||||||
Sbjct: 28 ttatattgtgaaacggaggaagtat 4
Score = 97.6 bits (49), Expect = 5e-20
Identities = 125/148 (84%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| | |||||| |||||| | | | |||||
Sbjct: 5 tacttcctccg-tttcacaatataagtcattctggcatttcccacattcatactcatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||| || | | |||||||| |||||||||||||||| | |||||||||| ||||
Sbjct: 64 aatgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaat 121
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 122 gctagaatgacttacattgtgaaacgga 149
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 147 bits (74), Expect = 6e-35
Identities = 131/149 (87%), Gaps = 7/149 (4%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || |||||| |||||| | |||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgc 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
|||||||||| | |||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 63 taatgaatct------agatatatgtctagattcattagcatcaatatgaatgtaggaaa 116
Query: 133 tactagaatgacttatattgtgaaacgga 161
| |||||||||||||||||||||||||||
Sbjct: 117 tgctagaatgacttatattgtgaaacgga 145
Score = 119 bits (60), Expect = 1e-26
Identities = 124/144 (86%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || |||||| ||||| | ||||||| |||||||||||
Sbjct: 142 gtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatcta- 84
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|| |||||| |||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 83 ---gacatatat--ctagattcattagcatcaatatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 121/137 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||||| | ||| || ||||| ||| ||
Sbjct: 15 gtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaatttag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 75 ctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 113 bits (57), Expect = 9e-25
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||| ||| ||||| || ||||||||||||| |||| ||| ||||||
Sbjct: 88 acatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctataatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 143 bits (72), Expect = 1e-33
Identities = 125/144 (86%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 80
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 a---------atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
Score = 133 bits (67), Expect = 9e-31
Identities = 129/148 (87%), Gaps = 10/148 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatcta----gacat-----tctagattcattaacatcaatatgaatgtgggaaat 114
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 115 gctagaatgacttacattgtgaaacgga 142
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 143 bits (72), Expect = 1e-33
Identities = 131/148 (88%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| |||| |||||||||| ||| || ||||||||||||| | ||||||| |
Sbjct: 5 tacttcctccg-tttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||||| |||||| ||||||||||||||||| ||||| ||| ||||||||
Sbjct: 64 aatgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaat 122
Query: 134 actagaatgacttatattgtgaaacgga 161
|||||||||||| |||||||||||||
Sbjct: 123 gttagaatgacttacattgtgaaacgga 150
Score = 137 bits (69), Expect = 6e-32
Identities = 127/145 (87%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| ||||||||| || ||| | ||| |||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctag 88
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||| |||| | | ||||||||||||| |||||||||||||||| ||||| ||||||||||
Sbjct: 87 atatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagtat 169
||| |||| |||||||| |||||||
Sbjct: 28 ttacattgcgaaacggaggaagtat 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 141 bits (71), Expect = 4e-33
Identities = 125/142 (88%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 29 cacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctatatag 88
|||||||||||| ||| || |||||| |||||| | ||||||||||||||||||| | |
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaca- 84
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 83 -tatatatgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttac 25
Query: 149 attgtgaaacggatgaagtata 170
|||||| |||||| ||||||||
Sbjct: 24 attgtggaacggaggaagtata 3
Score = 137 bits (69), Expect = 6e-32
Identities = 130/148 (87%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| || |||||||||||| ||| || ||||| ||||| | |||||||||
Sbjct: 5 tacttcctccg-ttccacaatgtaagtcattctagcattttctacattcatattgatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaat 121
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| |||||| ||||||
Sbjct: 122 gctagaatgacttacattgtggaacgga 149
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 115/130 (88%)
Strand = Plus / Plus
Query: 32 aatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctatatagata 91
||||||||| ||| ||||||||| |||||| | || | |||||||||||||| ||| |||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
|| ||||||||||||||||||| | |||||||||||| |||| ||||||||||||| |||
Sbjct: 82 tagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Query: 152 gtgaaacgga 161
||||||||||
Sbjct: 142 gtgaaacgga 151
Score = 105 bits (53), Expect = 2e-22
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||||| | || | ||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | ||||||| |||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 88 acatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| ||| || ||||||
Sbjct: 28 ttacattatggaacgga 12
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 139 bits (70), Expect = 1e-32
Identities = 91/97 (93%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatat--atgtctagattcattaacatcaatatgaat 105
Query: 125 gtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||| ||| |||||||||||||||||||||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaacgga 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/144 (82%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || |||||| || ||| | ||||||||||||||||| |
Sbjct: 139 gtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatc--t 82
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||||||||||||| |||||||||||| |||||| |||
Sbjct: 81 agacatatatctatctagattcattaacatc------aatgtgggaaatgctagaa-gac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| |||||||||| || ||||||
Sbjct: 28 ttacattgtgaaacagaggaagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 131/150 (87%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 12 cgtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatg 71
|||||| |||||| ||||||| ||||||| ||| || ||||||||||||| | || ||||
Sbjct: 3 cgtactccctccg-tttcacattgtaagtcattttatcatttctcacattcatatagatg 61
Query: 72 ttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaa 131
|||||||||||| | | ||||||| | ||||||||| |||||| |||||||||||||||
Sbjct: 62 ttaatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaa 121
Query: 132 atactagaatgacttatattgtgaaacgga 161
|| ||||||||||||| |||||||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacgga 151
Score = 129 bits (65), Expect = 1e-29
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | || |||||| |||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatctaa 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||| ||||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 88 atatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| | |||||||||||
Sbjct: 28 ttacaatgtgaaacgga 12
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 133 bits (67), Expect = 9e-31
Identities = 125/146 (85%), Gaps = 10/146 (6%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | ||||||||||||||||
Sbjct: 138 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat---- 83
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|||||||||||||||||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 82 ------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagtata 170
||| ||||||||||||| ||||||||
Sbjct: 28 ttacattgtgaaacggaggaagtata 3
Score = 117 bits (59), Expect = 5e-26
Identities = 126/147 (85%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||| |||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacatttatattaatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatcta----gacatatat------attcattaacatcaatatgaatgtgggaaat 113
Query: 134 actagaatgacttatattgtgaaacgg 160
||||||||||||| ||||||||||||
Sbjct: 114 gctagaatgacttacattgtgaaacgg 140
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||||| | ||| | || || |||| |||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaatctat 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||||||||||||||||||| |||| || ||||||||||||||||| ||||||||||
Sbjct: 75 atagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| ||| |||||||||
Sbjct: 135 ttacattatgaaacgga 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||||| |||||| | || || |||| ||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | | |||||||| |||| || |||||||| | |||||| ||||||||||
Sbjct: 88 acatatatatctatatagattcactaacctctatatgaatataggaaatgctagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| ||| |||||||||
Sbjct: 28 ttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 129 bits (65), Expect = 1e-29
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 152 gtgaaacggatgaagta 168
|||||||||| ||||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 73 taatgaatcta 83
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 129/149 (86%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| |||||||||||| || ||| || |||| |||||| | || ||||
Sbjct: 4 gtacttcctccg-tttcacaatgtatgtcattctagcattgtccacattcatatagatgc 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 63 taatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| ||||||||||||| |||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacgga 151
Score = 127 bits (64), Expect = 6e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||||| | |||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| ||||||||| |||||||||||| |||| |||||||||||| ||| ||||||||||
Sbjct: 88 acttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
|| ||||||||||||| ||||||
Sbjct: 28 atacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 129 bits (65), Expect = 1e-29
Identities = 127/148 (85%), Gaps = 6/148 (4%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||||| |||||| | |||||||| ||||||||||
Sbjct: 142 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 83
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 82 acagat------gtctagattcattgacatcaatatgaatgtgggaaatgatagaatgac 29
Query: 145 ttatattgtgaaacggatgaagtataat 172
||| ||||||||||||| ||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagtataat 1
Score = 121 bits (61), Expect = 4e-27
Identities = 127/148 (85%), Gaps = 7/148 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctatcatttcccacattcatattgatgtc 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 64 aatgaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaat 117
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| ||| |||||||||
Sbjct: 118 gctagaatgacttacattatgaaacgga 145
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| |||||||||| |||||| ||| ||||||||| ||||||
Sbjct: 45 ggcaatactagaaagacttacattatgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 123/148 (83%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| || || ||| | |||||| | || ||||||
Sbjct: 5 tacttcctccg-tttcataatgtaagtctttctagtattgcccacattcatatagatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | |||||| |||||||||||||||||||| |||||||| || | |||
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
|||||| | |||| ||| |||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 121/140 (86%)
Strand = Plus / Minus
Query: 29 cacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctatatag 88
|||||| ||||| ||| |||||||||||| ||| | ||||||| ||||||||||| | |
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatattgatgctaatgaatctaaacat 85
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||||| | |||| |||||||| ||||||||||||| ||| |||||||||||||||||||
Sbjct: 84 atatatctatctaaattcattagcatcaatatgaatatggaaaatactagaatgacttat 25
Query: 149 attgtgaaacggatgaagta 168
| |||| |||||| ||||||
Sbjct: 24 actgtggaacggaggaagta 5
Score = 113 bits (57), Expect = 9e-25
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
||||||| |||||||| || |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 55 attgatgctaatgaatttagatagatatatatgtttagattcattagcatcaatatgaat 114
Query: 125 gtgggaaatactagaatgacttatattgtgaaacgga 161
|| ||||| ||||||||||||||||||| ||||||
Sbjct: 115 atgagaaatgttagaatgacttatattgtggaacgga 151
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 127 bits (64), Expect = 6e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 90 tatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttata 149
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 150 ttgtgaaacgga 161
||||||||||||
Sbjct: 23 ttgtgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||| |||| |||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 136/158 (86%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 11 acgtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgat 70
||||||| |||||| ||||| |||| |||| ||| || ||||| ||||||| | || |||
Sbjct: 159 acgtactccctccg-tttcataatgcaagtcattttagcatttttcacattcatatagat 101
Query: 71 gttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtggga 130
|||||||||||||| | ||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 100 gttaatgaatctatgca--tatatatgtcttgattcattaacatctacatgaatgtggga 43
Query: 131 aatactagaatgacttatattgtgaaacggatgaagta 168
||| ||| ||||||||| ||||||||||||| ||||||
Sbjct: 42 aatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/148 (83%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | | ||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattttagcatttcccacattcatgtagatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||| | | ||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 64 aatgaatc--aagacatatatatgcatagattcattaacatctatatgaatgtgaaaaat 121
Query: 134 actagaatgacttatattgtgaaacgga 161
||| |||||||| ||| |||||||||
Sbjct: 122 gctaaaatgacttgcattatgaaacgga 149
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 118/137 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||||||||||| | |||||||| ||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||| |||||||||||||| | |||||||||||||| || || ||||||||||
Sbjct: 88 acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 125 bits (63), Expect = 2e-28
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||| ||||||||| | ||||| | ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | | ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 75 acatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 95/106 (89%)
Strand = Plus / Minus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
||||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||||
Sbjct: 108 attgatgctaatgaatctagatagatatatatgtctagattcattggcatcgatatgaat 49
Query: 125 gtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||| |||| ||||||||||||| ||| ||||||||| | ||||||
Sbjct: 48 gtggaaaatgctagaatgacttacattatgaaacggagggagtata 3
Score = 81.8 bits (41), Expect = 3e-15
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || ||||| |||||| | || |||| ||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||| |||||||||| ||||| |||| |||||||||
Sbjct: 75 acatatatatctatctagattcattagcatcaatatggatgtgaacaatagtagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| ||| |||||||||
Sbjct: 135 ttacattatgaaacgga 151
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 123 bits (62), Expect = 9e-28
Identities = 128/149 (85%), Gaps = 7/149 (4%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || ||||||||||||| | |||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattttagcatttctcacatttacattgatgc 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
|||||||| || ||| ||| ||||||||||||| ||||||||| ||||||| |||
Sbjct: 63 taatgaatttagata------tatctctagattcattagcatcaatataaatgtggaaaa 116
Query: 133 tactagaatgacttatattgtgaaacgga 161
| ||| |||||||||||||||||||||||
Sbjct: 117 tgctaaaatgacttatattgtgaaacgga 145
Score = 79.8 bits (40), Expect = 1e-14
Identities = 119/144 (82%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || ||||| |||||| | ||||||| |||||||||||
Sbjct: 142 gtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatctag 83
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| ||||||| ||| |||||||| ||||||| | |||||| ||||| ||| ||||||
Sbjct: 82 a--gatatat----ctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 123 bits (62), Expect = 9e-28
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 90 tatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttata 149
|||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| |
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 150 ttgtgaaacggatgaagtataa 171
|||||||||||| |||||||||
Sbjct: 117 ttgtgaaacggaggaagtataa 138
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||| || ||
Sbjct: 135 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatatttatatt 77
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 76 aatgaatcta 67
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 121 bits (61), Expect = 4e-27
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 156 aacggatgaagtataat 172
|||||| ||||||||||
Sbjct: 17 aacggaggaagtataat 1
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 110 aacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||| ||||||||||||| ||| |||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 128
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgtc 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 121 bits (61), Expect = 4e-27
Identities = 135/159 (84%), Gaps = 8/159 (5%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||| |||||| | |||||||||
Sbjct: 151 tacttcctccg-tttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||| || || ||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 92 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 40
Query: 134 actagaatgacttatattgtgaaacggatgaagtataat 172
| |||||||||||||||||||||||||| | ||||||||
Sbjct: 39 aatagaatgacttatattgtgaaacggagggagtataat 1
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 104 ttcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatg 163
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 164 aagta 168
|||||
Sbjct: 147 aagta 151
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 121 bits (61), Expect = 4e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 153 tgaaacgga 161
|||||||||
Sbjct: 125 tgaaacgga 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaag 166
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 167 ta 168
||
Sbjct: 6 ta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || |||||| |||||| | ||||||||||||||||||||
Sbjct: 130 gtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctat 71
Query: 85 a 85
|
Sbjct: 70 a 70
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 119 bits (60), Expect = 1e-26
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 78 aatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatacta 137
|||||| |||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 138 gaatgacttatattgtgaaacgga 161
|||||||||| ||| |||||||||
Sbjct: 35 gaatgacttacattatgaaacgga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 115/144 (79%), Gaps = 13/144 (9%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || ||||||||| ||| | |||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | |||||||| ||||||||||||||| ||||||||||
Sbjct: 75 acatatatatctatctagatt-------------atgaatgtgggaaatgctagaatgac 121
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||| ||||||| ||||||
Sbjct: 122 ttacattgtaaaacggaggaagta 145
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 127/148 (85%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || || | |||||||| | || ||||||
Sbjct: 158 tacttcctccg-tttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||| || | |||||||||||||||||||||| |||||||| | || |||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| ||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | | | |||| |||||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacatagacatatatctagattcattaacatccatatgaatgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
| | | ||||||||||||| ||| ||||||||| ||||||
Sbjct: 118 agcattgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 15 cggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/148 (84%), Gaps = 4/148 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || ||||| |||||| | |||||| |
Sbjct: 5 tacttcctccg-tttcacaatataagtcattctagtatttcccacattcatattgatact 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaat 120
Query: 134 actagaatgacttatattgtgaaacgga 161
| |||||||||| ||| |||||||||
Sbjct: 121 ggtggaatgacttacattatgaaacgga 148
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 151 tgtgaaacggatgaagtat 169
| ||||||||| |||||||
Sbjct: 22 tatgaaacggaggaagtat 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || |||||||||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||| ||||| ||||||||||||| ||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaa 119
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 117 cggaggaagta 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||| ||||| ||| || ||||||||||||| | ||||||||
Sbjct: 128 gtacttcctccg-tttcacaatataagtcattctagcatttctcacattcatattgatgt 70
Query: 73 taatgaatctatatag 88
||||||||||| ||||
Sbjct: 69 taatgaatctagatag 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 129 gaaatactagaatgacttatattgtgaaacggatgaagta 168
||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttc 54
|||||||||||| ||||||||||||||| ||| || ||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 151 tgtgaaacggatgaagta 168
| ||||||||| ||||||
Sbjct: 112 tatgaaacggaggaagta 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 129 tacttcctccg-tttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 74 aatgaatcta 83
|||| |||||
Sbjct: 70 aatggatcta 61
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtg 154
|||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 155 aaacggatgaagta 168
||||||| ||||||
Sbjct: 119 aaacggaggaagta 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 110 aacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || ||| || |||||| | |||||||||
Sbjct: 132 tacttcctccg-tttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 73 aatgaatcta 64
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||| |||||| | || |||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||| ||||||||||||||||||||| |||| |||||||||||| |||| ||||||||||
Sbjct: 88 ataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagtata 170
||| ||| ||||||||| | ||||||
Sbjct: 28 ttacattatgaaacggagggagtata 3
Score = 89.7 bits (45), Expect = 1e-17
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || ||||| |||||| | || |||| ||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| | ||||||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 75 acatatatatttatctagattcattagcatcgatatggatgtgaaaaatactagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| ||| |||||||||
Sbjct: 135 ttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 113 bits (57), Expect = 9e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 153 tgaaacgga 161
|||||||||
Sbjct: 125 tgaaacgga 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaag 166
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 167 ta 168
||
Sbjct: 6 ta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || ||||| |||||| | ||||||||||||||||||||
Sbjct: 130 gtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaatctat 71
Query: 85 a 85
|
Sbjct: 70 a 70
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 9e-25
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| |||||||| | ||| | || |||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatctat 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| |||||||||| || |||||||| |||| |||||||||||| |||| ||||||||||
Sbjct: 75 acgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgac 134
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||||| | || |||| |||||||| ||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaatttaa 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||| || ||||||||||| |||| |||||||| | | |||| |||||||||
Sbjct: 88 acatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 113 bits (57), Expect = 9e-25
Identities = 122/144 (84%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || | ||| |||||| | |||||||||||||| | ||
Sbjct: 142 gtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgagtttag 83
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 82 atagatacatatgtctagat------acatcaatatgaatgtggaaaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 8e-16
Identities = 123/149 (82%), Gaps = 7/149 (4%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || ||||| |||||| | ||||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||| | | || ||| | |||| | |||||||||||||||||||||||| |||
Sbjct: 63 ------atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaa 116
Query: 133 tactagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 117 ggctagaatgacttacattgtgaaacgga 145
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 158 cggatgaagtata 170
|||| | ||||||
Sbjct: 125 cggagggagtata 137
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||| ||||| ||| ||||||||| |||||| | |||||||||||||||||||
Sbjct: 125 gtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatcta 67
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 113 bits (57), Expect = 9e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 160 gatgaagta 168
|| ||||||
Sbjct: 122 gaggaagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||| |||||| | ||||||||| |||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || |||| |||||| | |||||||||
Sbjct: 130 tacttcctccg-tttcacaatataagtcattttagtattttccacattcatattgatgtt 72
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 71 aatgaatcta 62
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 113 bits (57), Expect = 9e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 152 gtgaaacggatgaagta 168
||||||||| ||||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||| ||||| ||| |||||||| |||||| | |||||||||
Sbjct: 139 tacttcctccg-tttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 80 aatgaatcta 71
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||| || |||||| |||| ||||||||||||| ||| |||||||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 158 cggatgaagtat 169
|||| |||||||
Sbjct: 15 cggaagaagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 119/146 (81%), Gaps = 12/146 (8%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||||||||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||||||||| |||||||| ||| ||| |||| ||||||||||
Sbjct: 75 a------------tgtagattcattaatatcaatataaatatggaaaatgctagaatgac 122
Query: 145 ttatattgtgaaacggatgaagtata 170
||| ||||||||||||| | ||||||
Sbjct: 123 ttacattgtgaaacggagggagtata 148
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 158 cggatgaagtat 169
|||| |||||||
Sbjct: 15 cggaagaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 118/146 (80%), Gaps = 12/146 (8%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||||||||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | |||||||||||| |||||||| ||| ||| |||| ||| ||||||
Sbjct: 75 a------------tgtagattcattaatatcaatataaatatggaaaatgctataatgac 122
Query: 145 ttatattgtgaaacggatgaagtata 170
||| ||||||||||||| | ||||||
Sbjct: 123 ttacattgtgaaacggagggagtata 148
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 126/148 (85%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || || | |||||||| | || ||||||
Sbjct: 5 tacttcctccg-tttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| ||| || | ||| |||||||||||||||||| |||||||| | || |||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| ||| |||||||||
Sbjct: 124 gctagaatgacttacattatgaaacgga 151
Score = 97.6 bits (49), Expect = 5e-20
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| ||| | | |||| |||||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagatatagacatatatctagattcattaacatccatatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
| | | ||||||||||||| ||| ||||||||| ||||||
Sbjct: 45 agcattgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 162 tgaagta 168
||||||
Sbjct: 11 ggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaatc 81
||||||||
Sbjct: 64 aatgaatc 71
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 134/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || |||| | ||||| | || ||||||
Sbjct: 5 tacttcctccg-tttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||| || ||| | || | |||||||||||||||||||| |||||||| |||| |||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 134 actagaatgacttatattgtgaaacggatgaagtataat 172
||||||||||||| ||| ||||||||| | ||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagtataat 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||| | || ||| | || ||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | | || ||| |||| ||||||||||||| ||||| ||||||| ||| ||||||||||
Sbjct: 88 acacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||| ||||||||| ||||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 106/123 (86%)
Strand = Plus / Plus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
|||| |||||||| | || |||||||||||||||| | | | |||||| |||||||||||
Sbjct: 39 cattcctcacattcatatagatgttaatgaatctagacacacatatatttctagattcat 98
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||| ||||||||||||| ||| |||||| | |||| ||| ||||||||| ||||||
Sbjct: 99 taacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
Query: 169 taa 171
|||
Sbjct: 159 taa 161
Score = 79.8 bits (40), Expect = 1e-14
Identities = 122/148 (82%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| |||||||| || || |||| | |||||| | || ||||||
Sbjct: 158 tacttcctccg-tttcataatgtaagactttctagcattgcccacattcatatagatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | |||| | |||||||||||||||||||| ||||||||||| | |||
Sbjct: 99 aatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||| || | |||| ||| |||||||||
Sbjct: 39 gctaaaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 106/123 (86%)
Strand = Plus / Minus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
|||| |||||||| | || |||||||||||||||| | | | |||||| |||||||||||
Sbjct: 124 cattgctcacattcatatagatgttaatgaatctagacacacatatatttctagattcat 65
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||| ||||||||||||| ||| |||||| | |||| ||| ||||||||| ||||||
Sbjct: 64 taacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Query: 169 taa 171
|||
Sbjct: 4 taa 2
Score = 79.8 bits (40), Expect = 1e-14
Identities = 122/148 (82%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| |||||||| || || |||| | |||||| | || ||||||
Sbjct: 5 tacttcctccg-tttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | |||| | |||||||||||||||||||| ||||||||||| | |||
Sbjct: 64 aatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
||| || | |||| ||| |||||||||
Sbjct: 124 gctaaaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 156 aacgga 161
||||||
Sbjct: 127 aacgga 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 119 atgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
|||||| |||||||| ||||||||||||| ||| ||||||||| |||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || |||||| || ||| | |||||||||||||||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 71
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 156 aacgga 161
||||||
Sbjct: 17 aacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || |||||| || ||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 119 atgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
|||||| |||||||| ||||||||||||| ||| ||||||||| |||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 140
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 156 aacgga 161
||||||
Sbjct: 135 aacgga 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 acgtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgat 70
||||||| |||||| ||||||||||||||| ||| || |||||||||||| | ||||||
Sbjct: 150 acgtactccctccg-tttcacaatgtaagtcattttagtatttctcacattcatattgat 92
Query: 71 gttaatgaatcta 83
|||||||||||||
Sbjct: 91 gttaatgaatcta 79
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||||||||||| |||||| |||||||| ||||||||| ||||||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 121/144 (84%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||||| | || ||||||||||| | ||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgagtttag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||| |||||||||||| |||||||||||||| ||| |||| ||||||||||
Sbjct: 75 atagatacatatgtctagat------acatcaatatgaatatggaaaatgctagaatgac 128
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||||||||||||| ||||||
Sbjct: 129 ttacattgtgaaacggaggaagta 152
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 123/146 (84%), Gaps = 9/146 (6%)
Strand = Plus / Minus
Query: 23 cggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatct 82
|||||||||||||||||| ||| || ||||||||||||| | ||||||||||||||| ||
Sbjct: 141 cggtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaaact 82
Query: 83 atatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatg 142
|| | | || |||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 81 atgtc-----acat----agattcattaacatcaatatgaatgtggaaaatgctagaatg 31
Query: 143 acttatattgtgaaacggatgaagta 168
||||| ||| ||||||||| ||||||
Sbjct: 30 acttacattatgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 121/145 (83%), Gaps = 10/145 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || ||||| |||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||||||| | || ||| | |||||||||||||||||||||||| |||||
Sbjct: 64 aatgaatctatgt-gacata--------gtttcattaacatcaatatgaatgtgagaaat 114
Query: 134 actagaatgacttatattgtgaaac 158
||||||||||||| ||||||||||
Sbjct: 115 gctagaatgacttacattgtgaaac 139
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 94 tatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgt 153
||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 154 gaaac 158
|||||
Sbjct: 132 gaaac 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
||||||||||||||||||||||||||||| |||| ||||||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 160 gatgaagta 168
|| ||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||| ||||| | |||||||||||||||||||||| |||| |||||||||||
Sbjct: 58 gatgttaatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | |||||| | ||||||||| ||||||
Sbjct: 118 ggcaatgctagaaagtcttataatatgaaacggaggaagta 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||| ||||||||||| | | |||||| ||| ||| |||||||||||| |||||| ||||
Sbjct: 105 gatgctaatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| ||| |||||| | |||||| | |||||||||
Sbjct: 45 ggcaatgctagaaagtcttataatatgaaacgga 12
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 156 aacggatgaagta 168
|||||| ||||||
Sbjct: 132 aacggaggaagta 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacgga 12
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 153 tgaaacgga 161
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 83.8 bits (42), Expect = 8e-16
Identities = 112/137 (81%), Gaps = 15/137 (10%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| ||||||||| |||||| | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc--- 71
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|| | || ||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 72 -----taaacatatctagattcattaacatcaatatga-------aaatgctagaatgac 119
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 120 ttacattgtgaaacgga 136
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 151 tgtgaaacggatgaagtataa 171
||||||||||| |||||||||
Sbjct: 113 tgtgaaacggaggaagtataa 133
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
|||||||||||| ||||||||||||||| ||| || |||||||||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagttattctagcatttctcacatt 51
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
||||||||||| ||||||||||||||| ||| || |||||| ||||||
Sbjct: 130 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacatt 84
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 153 tgaaacggatgaagtat 169
||||||||| |||||||
Sbjct: 100 tgaaacggaggaagtat 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || |||||| |||||| | |||||| ||
Sbjct: 115 tacttcctccg-tttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 56 aatgaatcta 47
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 135 ctagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||||| ||
Sbjct: 105 gatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | |||| ||||||||||||| ||||||
Sbjct: 45 ggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | || ||| | | |||||||||||||||| ||||| | |||
Sbjct: 58 gatgttaatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| |||||||||| | |||| |||||||||||||
Sbjct: 118 ggcaatactagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
||||||||||||||| || ||||||| | |||||| | || ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||| |||| | |||||||||||||||||||| ||||||||||| | ||| |||| | | |
Sbjct: 88 atatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtc 29
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 3e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 49 catttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagattcat 108
|||| |||||||| | || |||||||||||||||| | | | |||||| |||||||||||
Sbjct: 39 cattgctcacattcatatagatgttaatgaatctagacacacatatatatctagattcat 98
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||| || |||||||||| ||| || || | |||| |||||||||||||
Sbjct: 99 taacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 101 agattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgg 160
|||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 161 atgaagta 168
| ||||||
Sbjct: 12 aggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacgga 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||| |
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgatggt 63
Query: 74 aatgaatct 82
|||||||||
Sbjct: 64 aatgaatct 72
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 agattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgg 160
|||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 161 atgaagta 168
| ||||||
Sbjct: 128 aggaagta 135
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||| |||||||||||||||| ||||| ||||||||||||| || |||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaac 15
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || ||||||||||||| | ||||||| |
Sbjct: 135 tacttcctccg-tttcacaatataagtcattctagcatttctcacattcatattgatgct 77
Query: 74 aatgaatct 82
|||||||||
Sbjct: 76 aatgaatct 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatga 78
||||||| |||||||| ||| || ||||||||||||| | ||||||| ||||||
Sbjct: 15 gtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 158 cgga 161
||||
Sbjct: 122 cgga 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgat 70
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||| ||||| ||| || |||||| |||||| | ||| ||| |||||||||||
Sbjct: 122 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatcta 64
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 130/157 (82%), Gaps = 13/157 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| || |||||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 146 tacttcctccg-ttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||| |||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct: 87 aatgtatctatat------------ctagatacattaacatcaatatgaatgtggaaaat 40
Query: 134 actagaatgacttatattgtgaaacggatgaagtata 170
||||||||||||| ||||||||||||| | ||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtata 3
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 160 gatgaagtataa 171
|| |||||||||
Sbjct: 138 gaggaagtataa 149
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 125/148 (84%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| ||||||||| ||| || |||| | ||||| | || ||||||
Sbjct: 158 tacttcctccg-tttcataatgtaagtcattctagcattgcccacatatatatagatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||| || ||| | || | |||||||||||||||||||| |||||||||| || |||
Sbjct: 99 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaat 40
Query: 134 actagaatgacttatattgtgaaacgga 161
||||||||||||| ||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacgga 12
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||| | ||||| | || ||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctag 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | | || ||| |||| ||||||||||||| |||| ||||||| ||| ||||||||||
Sbjct: 75 acacacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaatgac 134
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||| ||||||||| ||||||
Sbjct: 135 ttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 agattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgg 160
||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 161 atgaagta 168
| ||||||
Sbjct: 128 aggaagta 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || |||||| |||||| | |||||| ||
Sbjct: 135 tacttcctccg-tttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 74 aatgaatct 82
|||||||||
Sbjct: 76 aatgaatct 68
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgat 70
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||
Sbjct: 132 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||| ||||| ||| || |||||| |||||| | ||| ||| |||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatcta 73
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 103 bits (52), Expect = 8e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||||| | ||||||||||||| ||||||||| ||| || ||||||||||||||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 149 attgtgaaacggatgaagta 168
||||||||||||| ||||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 75/86 (87%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||| ||||| ||| || |||||||| ||| | |||||||
Sbjct: 4 gtacttcctccg-tttcacaatataagtcattctagtatttctcatatttatattgatga 62
Query: 73 taatgaatctatatagatatatatgt 98
||||||||||| ||||||||||||||
Sbjct: 63 taatgaatctagatagatatatatgt 88
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || ||||| |||||| | |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 122 aatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||| ||||||||||| ||| ||||||||| ||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 158 cggatgaagtat 169
|||| |||||||
Sbjct: 130 cggaggaagtat 141
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaag 166
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 167 tata 170
||||
Sbjct: 137 tata 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||| | | |||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 158 cgga 161
||||
Sbjct: 126 cgga 129
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| ||||||||| |||||| | |||||||||||||||||||
Sbjct: 126 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 67
Query: 85 atagatat 92
||||||||
Sbjct: 66 atagatat 59
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 83 atatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatg 142
|||| ||| |||||||||||||||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 53 atattgatgtatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatg 112
Query: 143 acttatattgtgaaacgga 161
||||| |||||||||||||
Sbjct: 113 acttacattgtgaaacgga 131
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || ||||||||||||| | ||| |||| ||||||||||
Sbjct: 128 gtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatcta 70
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 122/147 (82%), Gaps = 14/147 (9%)
Strand = Plus / Plus
Query: 15 acttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtta 74
|||||||||| ||||| ||||||||| ||| || ||||||||||||| | ||||||||||
Sbjct: 6 acttcctccg-tttcataatgtaagtcattctagcatttctcacatttatattgatgtta 64
Query: 75 atgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaata 134
|| |||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct: 65 ataaatcta-------------gtctagattcattaacatcaatatgaatatggaaaatg 111
Query: 135 ctagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 112 ctagaatgacttacattgtgaaacgga 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 99 ctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
||||||| |||||||||||||| |||||| ||||| ||||||||||||| ||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 159 ggatgaagt 167
||| |||||
Sbjct: 14 ggaggaagt 6
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| ||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacat 140
Query: 151 tgtgaaacgga 161
|||||||||||
Sbjct: 141 tgtgaaacgga 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | |||| |||||| ||||||||||||| |||||||| ||
Sbjct: 105 gatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| | |||||||| | |||| |||||||||||||
Sbjct: 45 ggcagtactagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||||||||||||||||||||| ||||||||||||| || |||| ||| ||||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 149 attgtgaaacggatgaagt 167
||||||||||||| |||||
Sbjct: 113 attgtgaaacggaggaagt 131
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtataa 171
||||||||| ||||||| ||||||||||||| |||||||||| || ||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagtataa 2
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaag 166
|||||||||||||||||||||| |||| ||| |||||||||||||||||||| || ||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 167 ta 168
||
Sbjct: 2 ta 1
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | ||||||||||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctat 61
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 162 tgaagta 168
||||||
Sbjct: 128 ggaagta 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | |||||||||
Sbjct: 134 tacttcctccg-tttcacaatgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 74 aatgaatc 81
||||||||
Sbjct: 75 aatgaatc 68
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||| |||| | | ||||||||| ||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
||||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatat 23
Query: 151 tgtgaaacgga 161
| |||||||||
Sbjct: 22 tatgaaacgga 12
Score = 83.8 bits (42), Expect = 8e-16
Identities = 114/137 (83%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||| ||||| ||| || |||| | |||||| | || |||||||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctgg 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | ||||| || |||||||||||| ||| ||| ||||||||| ||| ||||||||||
Sbjct: 75 aca--tatatgtggctagattcattagtatctataagaatgtgggcaatcctagaatgac 132
Query: 145 ttatattgtgaaacgga 161
|||||||||||||||||
Sbjct: 133 ttatattgtgaaacgga 149
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 149 attgtgaaacggatgaagtata 170
||| ||||| ||| ||||||||
Sbjct: 113 attatgaaatggaggaagtata 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||||||| | || ||| ||||||||||||| ||| ||||||||| | ||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagtata 3
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 26 tttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
||||| ||||||||| ||| || |||| | |||||| | || ||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 99 ctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 159 ggatgaagta 168
||| ||||||
Sbjct: 14 ggaggaagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||| |
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattttagcatttcccacattcatattgatgct 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 106 cattaacatcaatatgaatgtgggaaatactaga-atgacttatattgtgaaacgga 161
||||| |||||||||||||||||||||| ||| | |||||||| |||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgga 136
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 160 ga 161
||
Sbjct: 13 ga 12
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 117
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || |||||| |||||| | || |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatctat 74
Query: 85 at 86
||
Sbjct: 75 at 76
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggat 162
|||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 163 gaagta 168
||||||
Sbjct: 109 gaagta 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 119 atgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| ||||| | |||||||||
Sbjct: 114 tacttcctccg-tttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 74 aatgaat 80
|||||||
Sbjct: 55 aatgaat 49
Score = 44.1 bits (22), Expect = 7e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 12 cgtacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
|||||| |||||| ||||||||||||||| ||| || |||||| ||||||
Sbjct: 3 cgtactccctccg-tttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 99 ctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 159 ggatgaagta 168
||| ||||||
Sbjct: 134 ggaggaagta 143
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | ||||||| |
Sbjct: 143 tacttcctccg-tttcacaatgtaagtcattttagcatttcccacattcatattgatgct 85
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 84 aatgaatcta 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 106 cattaacatcaatatgaatgtgggaaatactaga-atgacttatattgtgaaacgga 161
||||| |||||||||||||||||||||| ||| | |||||||| |||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 149 attgtgaaac 158
||| ||||||
Sbjct: 125 attatgaaac 134
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaag 166
|||||||||| |||||||||| |||| ||||||||||||| ||| ||||||||| ||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 167 ta 168
||
Sbjct: 6 ta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
|||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||| |||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 152 gtgaaacggatgaagta 168
||||||||| ||||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||| ||||||||| || || |||| | |||||| | || |||||
Sbjct: 4 gtacttcctccg-tttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
Query: 73 taatgaatcta 83
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttatat 107
Query: 151 t 151
|
Sbjct: 108 t 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgactta 147
|||||||| |||||||||||||||| ||||| |||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgactta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 97 gtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaa 156
|||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 157 acgga 161
|||||
Sbjct: 125 acgga 129
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||||| || ||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatg 71
||||||||||| ||||||||||||||||||| || |||||||| ||| | |||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||| ||| ||||| |||||||| ||||||| |||| ||||||||||||| |||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| ||| ||| | ||||||||||||||||||| | | |||||||||
Sbjct: 105 gatgttaatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | |||| ||||||||||||| ||||||
Sbjct: 45 ggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 70 tgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtggg 129
|||||||||||||| | | | ||||| | |||||||||||||||| ||||| || |||
Sbjct: 60 tgttaatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatgga 119
Query: 130 aaatactagaatgacttatattgtgaaacgga 161
||| |||||| | |||| |||||||||||||
Sbjct: 120 caatgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||||||| ||||| ||||||||||||||| |||| || ||||||||
Sbjct: 105 gatgttaatgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | |||| ||| ||||||||| ||||||
Sbjct: 45 ggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 121/148 (81%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| |||||||| || || |||| | |||||| | || |||| |
Sbjct: 5 tacttcctccg-tttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | ||||| | | |||||||||||||||| ||||||||| ||| |||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 134 actagaatgacttatattgtgaaacgga 161
|||||| | |||| |||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||| ||| ||||| |||||||| |||||||||||| ||||||||||||| |||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaat 76
|||||||||||||||| ||| || |||||| |||||| | |||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattgatattaat 66
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 46 taacatttctcacattgaaattgatgttaatgaatctatatagatatatatgtctagatt 105
||||||||| |||||| | || | |||||||||||||| ||| ||||| |||||||||||
Sbjct: 97 taacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctagatt 38
Query: 106 cattaacatcaatatgaatgtgggaaatactagaatg 142
|||||||| | |||||||||||| |||| ||||||||
Sbjct: 37 cattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 70 tgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtggg 129
|||||||||||||| | | ||||||| |||||||||||||||| | |||||||||||||
Sbjct: 30 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 89
Query: 130 aaatactagaatg 142
|||| |||||||
Sbjct: 90 aaatgttagaatg 102
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 104 ttcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatg 163
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 164 aagta 168
|||||
Sbjct: 9 aagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| |||||||||| |||| ||| || |||||| |||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgcaagtcattctagcatttcccacattcatattgatgtt 63
Query: 74 aatgaa 79
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatga 164
||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 165 agtat 169
|||||
Sbjct: 127 agtat 131
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 108 ttaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||| ||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| |||||| | || ||||||
Sbjct: 130 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 74 aatga 78
|||||
Sbjct: 71 aatga 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaa 75
|||||||||||||||| ||| || |||||| |||||| | || ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaa 65
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 158 cgga 161
||||
Sbjct: 113 cgga 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 130 aaatactagaatgacttatattgtgaaacggatgaagtat 169
|||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||| ||||||||| ||| || |||||| ||||| | |||||||||||||||||||
Sbjct: 113 gtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatcta 55
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||| ||| ||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagtataa 171
| ||| ||| || | |||| ||||||||||||| | |||||||
Sbjct: 118 gacaatcctaaaaagtcttacattgtgaaacggagggagtataa 161
Score = 91.7 bits (46), Expect = 3e-18
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | || ||||| ||||| |||||||||||| |||||||| ||
Sbjct: 105 gatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| |||||||||| | |||||||| |||||||||
Sbjct: 45 ggcaatactagaaagtcttatattatgaaacgga 12
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatc 81
|||||||||||||||| ||| || |||||| |||||| | ||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||| ||| ||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagtataa 171
| ||| ||| || | |||| ||||||||||||| | |||||||
Sbjct: 45 gacaatcctaaaaagtcttacattgtgaaacggagggagtataa 2
Score = 91.7 bits (46), Expect = 3e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | || ||||| ||||| |||||||||||| |||||||| ||
Sbjct: 58 gatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| |||||||||| | |||||||| |||||||||
Sbjct: 118 ggcaatactagaaagtcttatattatgaaacgga 151
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 90 tatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttata 149
|||| ||||||||||| |||||||||||||||||| |||||||| ||| |||||||| |
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 150 ttgtgaaacggatgaagtat 169
|||||||||||| |||||||
Sbjct: 118 ttgtgaaacggaggaagtat 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 120 tgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| |||||||||| |||| ||| || |||||| || ||| | |||||||||
Sbjct: 136 tacttcctccg-tttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 74 aatgaatcta 83
||| ||||||
Sbjct: 77 aataaatcta 68
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 106 cattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaa 165
|||| |||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 166 gtat 169
||||
Sbjct: 140 gtat 143
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||| | | |||| |||||||||||||||||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 136 cggaggaagta 146
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 158 cgga 161
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||| ||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 151 tgtgaaacgga 161
|||||||||||
Sbjct: 141 tgtgaaacgga 151
Score = 67.9 bits (34), Expect = 5e-11
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | |||| |||||| ||||||||||||| |||||||| ||
Sbjct: 105 gatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| | |||||||| | |||| || ||||||||||
Sbjct: 45 ggcagtactagaaagtcttacatggtgaaacgga 12
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||||||| | | |||| |||||||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 15 cggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 158 cgga 161
||||
Sbjct: 136 cgga 139
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 94 tatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgt 153
||||| || ||| |||||||||||||||||||||| |||||||| ||||||||| |||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 154 gaaacggatgaagta 168
|||||||| ||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||| |||||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattttagtattttccacattcatattgatgtt 63
Query: 74 aatgaatctata 85
||| ||| ||||
Sbjct: 64 aataaatttata 75
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 8e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 114 tcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagtata 3
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
||||||||||||||||||| ||||||||| ||| || ||||| ||| ||||||||| |||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 152 gtgaaacggatgaagtat 169
|||||||||| |||||||
Sbjct: 21 gtgaaacggaggaagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacgga 132
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||||||| ||| | ||||||| |
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/101 (87%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | ||| | |||||||||||||||||||| |||||||||||
Sbjct: 103 gatgttaatgaatctagaca--tatgtgtgtctagattcattaacatctatatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| |||||| ||| ||||||||| ||||||
Sbjct: 45 ggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 93/112 (83%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||| ||||||||| || || |||| | |||||| | || |||||
Sbjct: 4 gtacttcctccg-tttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
||||||||| || | | | ||||||||||||||||||||||| | ||||||
Sbjct: 63 taatgaatc--tagacacacatatgtctagattcattaacatctagatgaat 112
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggat 162
||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 163 gaagta 168
||||||
Sbjct: 121 gaagta 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||| ||||||||| ||||||||||||| |||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || |||||| ||||| | |||||| ||
Sbjct: 126 tacttcctccg-tttcacaatgtaagtcattctagcatttccaacattcatattgatatt 68
Query: 74 aatgaatctatata 87
||||||| ||||||
Sbjct: 67 aatgaatatatata 54
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
||||||||||||||||||||||||||| | |||||||||| ||| |||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 149 attgtgaaacggatgaagtata 170
||||||||||||| ||||||||
Sbjct: 24 attgtgaaacggaggaagtata 3
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| ||| | | |||||| ||||||||||| |||| |||||||||||
Sbjct: 58 gatgttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| ||| ||| ||||||||| ||| |||||||||
Sbjct: 118 ggcaatgctaaaatgacttacattatgaaacgga 151
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || |||| | |||||| | || |||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatctaa 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | || | ||| |||||||||||||||||| ||||| || |||| || ||||||||||
Sbjct: 88 acatatgtctatatctagattcattaacatctatatgcatatgggtaaggctagaatgac 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||| ||||||||| ||||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggat 162
|||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 163 gaagta 168
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||| ||| |||| ||||||||||||| ||| |||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacgga 122
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||| || ||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 74 aatgaat 80
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| ||| || ||||||||| ||||| || ||||||| ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatctaa 74
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
|| |||||||||||||||||| ||||||| | |||||||| |||| ||| ||||||
Sbjct: 75 gtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgac 134
Query: 145 ttatattgtgaaac 158
||| ||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 81.8 bits (41), Expect = 3e-15
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||| ||||||||| |||||| ||||| ||||||| | | ||||||| ||||||||
Sbjct: 148 gtttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | ||||| || |||||||| ||||||| |||| ||| || ||||| ||||||||||
Sbjct: 88 acatatatacatacttagattcactaacatctatatcaatatgagaaatgctagaatgac 29
Query: 145 ttatattgtgaaacgga 161
||| ||| |||||||||
Sbjct: 28 ttacattatgaaacgga 12
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | | ||||||||||||||||||||||||| ||||||||||
Sbjct: 105 gatgttaatgaatctaaacacacatatatgtctagattcattaacatctatatgaatgta 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagtat 169
| ||| |||||| | |||| ||| ||||||||| |||||||
Sbjct: 45 gacaatgctagaaagtcttacattatgaaacggaggaagtat 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | |||| | ||| |||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
| || |||||| | |||| ||| |||||||||
Sbjct: 118 gacaaacctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggat 162
||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 163 gaagta 168
||||||
Sbjct: 10 gaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || ||||||||||||| | |||| |||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcatttctcacattcatattgctgt 62
Query: 73 taatgaatctatatagatat 92
|||||||| |||||| ||||
Sbjct: 63 taatgaatatatatatatat 82
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||| ||| |||| ||||||||||||| |||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 123
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtata 3
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 114 tcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
||||||||||| ||||||||| ||||| ||| || |||||| ||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacatt 69
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||| |||||||||||||||||||||| ||| |||| |||||||||||| |||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 158 cggatgaagtata 170
|||| ||||||||
Sbjct: 15 cggaggaagtata 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| |||||||| || ||| | |||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctaacattttccatattcatattgatgtt 63
Query: 74 aatgaat 80
|||||||
Sbjct: 64 aatgaat 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||| || |||||||| ||||||||| ||| |||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacgga 129
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 158 cggatgaagtata 170
| || ||||||||
Sbjct: 15 cagaggaagtata 3
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||||||||| ||| ||||||||| ||| |||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacgga 131
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
|||||||||||||||||||||| ||||| ||| | ||||| |||||||||||||||||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 152 gtgaaacggatgaagta 168
|||||||||| ||||||
Sbjct: 123 gtgaaacggaggaagta 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 118 tatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
||||||||||| |||||||||||||||||| ||||||||||||| |||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggatgtagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 133/161 (82%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 11 acgtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgat 70
|||||||||||||| ||||| |||||||| || || |||| | |||||| | || |||
Sbjct: 2 acgtacttcctccg-tttcataatgtaagactttatagcattacccacattcatatagat 60
Query: 71 gttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtggga 130
| |||| |||||||||| ||| |||||||||||||||| |||| |||||||||||||
Sbjct: 61 gctaataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggc 120
Query: 131 aatactagaatgacttatattgtgaaacggatgaagtataa 171
||| ||||| | |||| ||||||||||||| | |||||||
Sbjct: 121 aatgttagaaagtcttacattgtgaaacggagggagtataa 161
Score = 56.0 bits (28), Expect = 2e-07
Identities = 115/144 (79%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
||||||||||||||| || ||||||| | |||||| | || |||| |||||||||||
Sbjct: 148 gtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaatctag 89
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
| | ||||| | |||||| |||| |||| ||||||||||||| ||| ||| || | |
Sbjct: 88 acattattatatatatagatttattagcatctatatgaatgtgggtaatgctataaagtc 29
Query: 145 ttatattgtgaaacggatgaagta 168
||| ||| ||||||||| ||||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 86 tagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgact 145
||||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Query: 146 t 146
|
Sbjct: 123 t 123
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgactt 146
||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
||||||||||||| ||||||||| ||||||||||||| ||| |||||| | |||| ||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 153 tgaaacggatgaagta 168
||||||||| ||||||
Sbjct: 119 tgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| ||| |||||| || ||||||||||||||||| ||||||||||||
Sbjct: 35 atgttaatgaatctagatatatatatgtgcctagattcattaacatctatatgaatgtgg 94
Query: 129 gaaatactagaa 140
| ||| ||||||
Sbjct: 95 gcaatgctagaa 106
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | |||||||| ||||||||||||||||| |||||||||||
Sbjct: 81 gatgttaatgaatctaggcacatatatatatctagattcattaacatatatatgaatgtg 22
Query: 128 ggaaatactagaa 140
|| ||| ||||||
Sbjct: 21 ggcaatgctagaa 9
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtg 154
||||||||||||||||||||| ||||||||||||| ||| |||||| | |||||| | ||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 155 aaacggatgaagtata 170
||||||| ||||||||
Sbjct: 113 aaacggaggaagtata 128
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||| ||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 151 tgtgaaacgga 161
||||||||||
Sbjct: 113 ggtgaaacgga 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
||||||| |||||||| | | |||||||| |||||| | |||||||||||||||||||
Sbjct: 120 gtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatctag 61
Query: 85 atagatat 92
||| ||||
Sbjct: 60 atatatat 53
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 104 ttcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatg 163
||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||||| |
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 164 aagtata 170
||||||
Sbjct: 117 gagtata 123
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
|||||||||||| ||||||||||||||| ||| || |||||| ||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattttagcatttcccacatt 51
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaa 79
|||||||||| ||||| ||| || |||||| |||||| | | |||||||||||||
Sbjct: 111 gtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||| ||||||||| ||| |||| |||||| |||||| |||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 124 cggaggaagta 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||| |||| |||||||||||| ||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| || || ||||| || ||| | ||| ||||
Sbjct: 135 gtacttcctccg-tttcacaatgtaagtccttctagcattttccatattcatattaatgt 77
Query: 73 taatgaatctatatagatatatatg 97
||||||||||| || |||||||||
Sbjct: 76 taatgaatctagatgaatatatatg 52
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 8e-16
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| | | ||| |||||| |||||||||||||||| | ||||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 129 gaaatactagaatgacttatattgtgaaac 158
| ||| |||||| | |||| ||||||||||
Sbjct: 44 gtaatgctagaaagtcttacattgtgaaac 15
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacat 114
|||||||||||||||| | | || ||| ||| |||||||||||||||
Sbjct: 58 gatgttaatgaatctaaacatatgtatgtgtttagattcattaacat 104
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 8e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 71 gttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtggga 130
||||||||||||| | | ||| ||||||||||||||||||||||| | |||||| ||||
Sbjct: 61 gttaatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggc 120
Query: 131 aatactagaatgacttatattgtgaaacggatgaagta 168
||| ||| || | |||| ||||||||||||| ||||||
Sbjct: 121 aatgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | || ||| ||| ||||||||||||| || ||||| || ||
Sbjct: 105 gatgttaatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
| ||| |||||| | |||| |||||||||||||
Sbjct: 45 agcaatgctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatga 164
||||| |||||||||| |||||| ||||| ||||||||||||||||||| ||||||| ||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 165 agtata 170
||||||
Sbjct: 90 agtata 95
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||| ||||| ||||| ||| || ||||||||||||| | ||||||||
Sbjct: 93 tacttcctccgtttt-acaatataagtcattctagcatttctcacatttatattgatgta 35
Query: 74 aatga 78
|||||
Sbjct: 34 aatga 30
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 139 aatgacttatattgtgaaacgga 161
|||||||||||||||||||||||
Sbjct: 34 aatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 8e-16
Identities = 90/105 (85%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagata--tatatgtctagattcattaacatcaatatgaatg 125
|||||||||||||||||| | | | ||||| | |||||||||||||||| |||||||||
Sbjct: 107 gatgttaatgaatctatacacacacatatatatatagattcattaacatctatatgaatg 48
Query: 126 tgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||| ||| |||||| | |||||| | ||||||||| ||||||||
Sbjct: 47 tgggcaatgctagaaagtcttataatatgaaacggaggaagtata 3
Score = 83.8 bits (42), Expect = 8e-16
Identities = 90/105 (85%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtcta--gattcattaacatcaatatgaatg 125
|||||||||||||||||||| |||| | ||| || |||||||||||||| |||||||||
Sbjct: 58 gatgttaatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatg 117
Query: 126 tgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||| ||| |||||| | |||||| | ||||||||| | ||||||
Sbjct: 118 tgggcaatgctagaaagtcttataatatgaaacggagggagtata 162
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 83.8 bits (42), Expect = 8e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatg 71
|||||||||||||||| ||| || |||||||||||| | |||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 8e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
||||||||||| ||||||||||||||| ||| || ||||||||||||| | ||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 8e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtg 154
|||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||| ||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 155 aaacgga 161
||||||
Sbjct: 18 gaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 29 cacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||| ||| || |||||| || ||| | ||||||| |||||||||||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
||||||||||| |||||||||||||| ||| || |||||| |||||| | ||||||||
Sbjct: 132 tacttcctccg-tttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 8e-16
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | || |||||||||||||| ||||||||| | ||| |||||
Sbjct: 58 gatgttaatgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacgga 161
|| ||| |||||| | |||| |||||||||||||
Sbjct: 118 ggcaatgctagaaagtcttacattgtgaaacgga 151
Score = 73.8 bits (37), Expect = 7e-13
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
||||||||| |||||| | | ||| |||||| |||||||||||||||| | |||||||
Sbjct: 105 gatgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaatgga 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||||||| || | |||| ||||||||||||| ||||||
Sbjct: 45 ggtaatactataaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| | | ||| |||||||||||||||||| |||| | |||||| |||
Sbjct: 59 atgttaatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgg 118
Query: 129 gaaatactagaatgacttatattgtgaaacgga 161
| ||| |||||| | |||| |||||||||||||
Sbjct: 119 gcaatgctagaaagtcttacattgtgaaacgga 151
Score = 73.8 bits (37), Expect = 7e-13
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||| ||||||||||| | | || ||| ||| ||||||||||||||| ||||| |||||
Sbjct: 105 gatgctaatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | |||| ||||||||||||| ||||||
Sbjct: 45 ggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| |||||||||||||||| |||| ||||||| ||||| |||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 158 cggatgaagtata 170
|||| | ||||||
Sbjct: 15 cggagggagtata 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || ||||| ||||||| | ||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||| |||||||| ||||||||| ||||| | |||| ||| ||||| ||| |||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 158 cgga 161
||||
Sbjct: 136 cgga 139
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 94 tatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgt 153
|||||||| |||||||| ||| ||||||||||||| ||| |||||| | |||| |||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 154 gaaacggatgaagtata 170
|||||||||||||||||
Sbjct: 112 gaaacggatgaagtata 128
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
||||| |||||||||| | | ||||||||||||||||||||| |||| |||||||||||
Sbjct: 105 gatgtcaatgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| ||||| | |||||| | ||||||||| ||||||
Sbjct: 45 ggcaatgttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 85 atagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgac 144
||||||| || | |||||||| |||||||||||||| ||| || ||||| ||||||||||
Sbjct: 62 atagatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgac 121
Query: 145 ttatattgtgaaacgga 161
||| |||||||||||||
Sbjct: 122 ttacattgtgaaacgga 138
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||||| |||||||||||||||| ||||| ||||||| ||| |||||| | |||||||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 153 tgaaacgga 161
|||||||||
Sbjct: 121 tgaaacgga 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 144 cttatattgtgaaacggatgaagtat 169
|||||||||||||||||| |||||||
Sbjct: 29 cttatattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||||| |||||||||||||||| ||||| ||||||| ||| |||||| | |||||||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 153 tgaaacgga 161
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 cttatattgtgaaacggatgaagtat 169
|||||||||||||||||| |||||||
Sbjct: 112 cttatattgtgaaacggaggaagtat 137
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||| |||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 129 gaaatactagaatgacttatattgtgaaacggatgaagtata 170
||||| ||||||||||||| ||||||||||||| ||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagtata 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcac 58
||||||||||| ||||||||||||||| ||| || ||||||||||
Sbjct: 126 tacttcctccg-tttcacaatgtaagtcattctagcatttctcac 83
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| ||||||||| ||| || |||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 158 cggatgaagtata 170
|||| | ||||||
Sbjct: 15 cggagggagtata 3
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||| |||||||| ||||||||||||||| | |||| ||||||||| ||| |||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 158 cgga 161
||||
Sbjct: 136 cgga 139
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||||||| |||| ||| ||| | ||| |||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacgga 121
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatga 78
|||||||||||||||| ||| || ||||| |||||| | ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||||||||||||||||||||||||| ||||||||||||| ||| |||||| | |||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 149 attgtgaaacgga 161
| | |||||||||
Sbjct: 113 aatttgaaacgga 125
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||||| |||||||||| | |||||| | ||||||||| ||||||
Sbjct: 56 atatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | |||||| ||| |||||||||||||||| | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | ||| ||| ||||||||| ||||||
Sbjct: 45 ggtaatgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatc 115
|||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 58 gatgttaatgaatctaaacacatatatatgtctagattcattaacatc 105
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||||||||| |||| ||||||| |||| ||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 120 cggaggaagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||| |||||||| ||| || ||||| ||||||| | |||||||||
Sbjct: 130 tacttcctccg-tttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 74 aatgaatctatatagatat 92
|||||||||| ||||||||
Sbjct: 71 aatgaatctagatagatat 53
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactaga-atgacttatattgtgaa 156
|||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 157 acgga 161
|||||
Sbjct: 16 acgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 46 taacatttctcacattgaaattgatgttaatgaatctatatagatat 92
||||||||| |||||| | ||||||||||||||||||| ||||||||
Sbjct: 37 taacatttcccacattcatattgatgttaatgaatctagatagatat 83
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||| ||||||||||||||||||| ||| | ||| || |||| ||| ||||||||||||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 151 tgtgaaacggatgaagtata 170
||||||||||| ||||||||
Sbjct: 22 tgtgaaacggaagaagtata 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||| |||| || |||||||||||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacgga 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||| ||||| ||| || ||||| ||| ||| | ||| |||||||||||||||
Sbjct: 15 gtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctag 74
Query: 85 atagatat 92
| ||||||
Sbjct: 75 acagatat 82
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtg 154
|||| ||||||||| ||||||||||||||||||| |||| ||||||| ||||| ||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 155 aaacggatgaagtata 170
||||||| | ||||||
Sbjct: 18 aaacggagggagtata 3
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 110 aacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||||||||| ||| |||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || ||||| |||||| | ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaatcta 72
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggat 162
|||||||||||||||||| || ||| |||| ||||||||||||| |||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 163 gaagtata 170
||||||||
Sbjct: 126 gaagtata 133
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||| |||| || | |||||||||
Sbjct: 131 tacttcctccg-tttcacaatgtaagtcattctagcatttttcacgtttatattgatgtt 73
Query: 74 aatgaat 80
|||||||
Sbjct: 72 aatgaat 66
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | ||||||||||||||||||||| ||||| |||||||||||
Sbjct: 34 gatgttaatgaatctagacacatatatatgtctagattcatttacatctatatgaatgtg 93
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
||||| |||||||||| | | |||||| |||||||||||||||||||| |||||||||||
Sbjct: 81 gatgtaaatgaatctagacatatatatgtgtctagattcattaacatctatatgaatgtg 22
Query: 128 gg 129
||
Sbjct: 21 gg 20
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| |||||||||||||| || || |||| ||||||| | || ||||||
Sbjct: 158 tacttcctccg-tttcacaatgtaagactttctagcattgctcacatacatatagatgtt 100
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | || ||||||||| ||||||||||||| | |||||||| || |||
Sbjct: 99 aatgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaat 40
Query: 134 actagaatgacttatattgtgaaacggatgaagta 168
| || || | |||| ||||| ||||||| ||||||
Sbjct: 39 attaaaaagtcttacattgtaaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||||||| ||||| ||||| | ||| |||||| | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 160 gatgaagta 168
|| ||||||
Sbjct: 150 gaggaagta 158
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 83 atatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatg 142
||||| |||||||||||||||||||||| |||| ||||||||||||| ||| ||||| |
Sbjct: 53 atatatatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaag 112
Query: 143 acttatattgtgaaacgga 161
|||||| | |||||||||
Sbjct: 113 tcttataatatgaaacgga 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
||||||||||||| ||||||||| | |||||| | | ||||||| ||||||||
Sbjct: 56 atatgaatgtgggcaatactagatagtcttataatataaaacggaggaagtata 3
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 108 ttaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagt 167
||||||||||||| ||| || ||||| ||| ||||||||||||||||||||||| |||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 168 ata 170
|||
Sbjct: 122 ata 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 108 ttaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||| ||| || ||||| ||| ||||||||| |||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaa 75
|||||||||||||||| ||| || ||||||||| ||| | |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatgttaa 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||| ||||| ||| || ||||||||| ||| | |||||||||
Sbjct: 122 tacttcctccg-tttcacaatataagtcattttagcatttctcatatttatattgatgtt 64
Query: 74 aa 75
||
Sbjct: 63 aa 62
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 94 tatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgt 153
|||||||||||| ||||||||| |||||||||||| ||| ||||||| ||||| ||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 154 gaaacggatgaagtataat 172
|||||||| | ||||||||
Sbjct: 123 gaaacggagggagtataat 141
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||||||||| | ||| |||| ||| ||||||||| |||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 120 cggaggaagta 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||| |||| | | |||||||||
Sbjct: 130 tacttcctccg-tttcacaatgtaagtcattttagcatttttcacgtacatattgatgtt 72
Query: 74 aatgaatctatatagatatatatgt 98
|||||||||| ||||||||| ||||
Sbjct: 71 aatgaatctagatagatataaatgt 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||| |||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacgga 12
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 118 tatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
||||||||||| ||||||||||||||| ||| || |||||| ||||||
Sbjct: 95 tacttcctccg-tttcacaatgtaagtcattctagcatttcccacatt 49
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 129 gaaatactagaatgacttatattgtgaaac 158
||||| ||||||||||||| ||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||||||||||||| | ||| |||| ||||||||||||| |||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 158 cggatgaagta 168
|||| ||||||
Sbjct: 120 cggaggaagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||| |||| | | |||||||||
Sbjct: 130 tacttcctccg-tttcacaatgtaagtcattctagcatttttcacgtatatattgatgtt 72
Query: 74 aatgaatctatatagatat 92
|||||||||| ||||||||
Sbjct: 71 aatgaatctagatagatat 53
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacgga 12
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 106 cattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaa 165
||||||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||| |||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 166 gta 168
|||
Sbjct: 7 gta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| ||||||||||||||| ||| || ||||||||||||| | ||| |||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 74 aatg 77
||||
Sbjct: 64 aatg 67
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||| |||||||||||| || ||||| ||||||||||||| ||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 160 ga 161
||
Sbjct: 118 ga 119
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||| ||||||||| ||| || ||||||||| ||| | |||||| ||||||||||||
Sbjct: 116 gtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatcta 58
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
|||| |||| |||||||| |||||||| ||||||||||||| ||| |||||| | |||||
Sbjct: 84 atatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttat 25
Query: 149 attgtgaaacggatgaagtata 170
| | ||||||||| ||||||||
Sbjct: 24 aatatgaaacggaggaagtata 3
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
||||||||||||||||||||| | ||||| |||| ||||||| ||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 160 ga 161
||
Sbjct: 13 ga 12
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||| | | ||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatctat 74
Query: 85 atagatata 93
|||||||||
Sbjct: 75 atagatata 83
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 112 catcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||| ||||||||| ||||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggat 162
||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 163 gaagta 168
||||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
|||||||||||| ||||||||||||||| ||| || ||||| |||||| | ||||||||
Sbjct: 4 gtacttcctccg-tttcacaatgtaagtcattctagcattt-tcacatccatattgatgt 61
Query: 73 taatgaat 80
||||||||
Sbjct: 62 taatgaat 69
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 130 aaatactagaatgacttatattgtgaaacgga 161
|||| ||||||||||||| |||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacgga 105
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||| |||||||||||||| | ||||| |||| ||||||||||||| |||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 160 ga 161
||
Sbjct: 131 ga 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatctat 84
|||||||||||||||| ||| || ||||| |||| | | |||||||||||| |||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatctat 70
Query: 85 atagata 91
|||||||
Sbjct: 69 atagata 63
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||| |||||||| || || ||||| |||||||||||||||||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 160 ga 161
||
Sbjct: 13 ga 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 109 taacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||| ||||||||| |||| ||| ||||||||||||||||||||||| ||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||| ||||| ||| || ||||||||| || || |||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatcta 73
Score = 44.1 bits (22), Expect = 7e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 13 gtacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgt 72
||||||||||| |||||||||| ||||| ||| || ||||| ||||||| | |||||||
Sbjct: 138 gtacttcctcc-gtttcacaatataagtcattttagcatttttcacattcatgttgatgt 80
Query: 73 ta 74
||
Sbjct: 79 ta 78
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaat 6
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaat 111
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||| ||||||||||||| ||||||||||||| ||| |||||| | |||| ||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 156 aacggatgaagtataat 172
|||||| | ||||||||
Sbjct: 17 aacggagggagtataat 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||| ||||||||||||| ||| |||||| | |||| ||| |||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 135
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatgactt 146
||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 102 gattcattaacatcaatatgaatgtgggaaatactagaatga 143
||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 73.8 bits (37), Expect = 7e-13
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcatt-aacatcaatatgaatgt 126
|||||||||||||||| ||| || || |||||||||| ||| |||||| ||||||||||
Sbjct: 106 gatgttaatgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgt 47
Query: 127 gggaaatactagaatgacttatattgtgaaacggatgaagtataa 171
||| ||| |||||| | |||||| | ||||||||| | |||||||
Sbjct: 46 gggtaatgctagaaagtcttataatatgaaacggagggagtataa 2
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||| |||||||||||||||||| ||||||||||||| ||| |||||| | |||||| |
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatc 143
Query: 153 tgaaacgga 161
|||||||||
Sbjct: 144 tgaaacgga 152
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
||||||||||||||||||||||| | ||||||||||| || ||| || | |||| ||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattg 21
Query: 153 tgaaacggatgaagtat 169
||||||||| |||||||
Sbjct: 20 tgaaacggaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 119/148 (80%), Gaps = 5/148 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| |||||||||||||| ||||| | || | |||||| | | ||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| || |||| | | |||||||||||||||| |||| ||||||| | |
Sbjct: 64 aatgaatcta----gacatatgtatttagattcattaacatctttatgtatgtgggtagt 119
Query: 134 actagaatgacttatattgtgaaacgga 161
||| || | ||||||||||||||||||
Sbjct: 120 gctaaaaagtcttatattgtgaaacgga 147
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 105 tcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatga 164
|||||||||||||||||||||||| || | ||| ||||||||| ||| ||||||||| ||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 165 agta 168
||||
Sbjct: 8 agta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 107 attaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaag 166
||||| |||||||| |||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 167 tata 170
||||
Sbjct: 107 tata 110
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 136 tagaatgacttatattgtgaaacgga 161
|||||||||||| |||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 86 tagatatatatgtctagattcattaacatcaatatgaatgtggg 129
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtggg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 86 tagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactag 138
|||| |||||| ||||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 38 tagacatatatatctagattcattaacatatatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 3e-12
Identities = 65/74 (87%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
|||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||
Sbjct: 21 attgatattaatgaatctagatagatataa---tctagattcattaatatcaatatgaac 77
Query: 125 gtgggaaatactag 138
||||||||| ||||
Sbjct: 78 gtgggaaatgctag 91
Score = 63.9 bits (32), Expect = 7e-10
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 65 attgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaat 124
|||||| |||||||||||| || ||||| | |||||||||||||| |||||||||||
Sbjct: 71 attgatattaatgaatctagat---tatatctatctagattcattaatatcaatatgaac 15
Query: 125 gtgggaaatactag 138
||||||||| ||||
Sbjct: 14 gtgggaaatgctag 1
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| | | ||||||| ||||||||||||||||| ||||||||||||
Sbjct: 35 atgttaatgaatctaggcatacatatatgcctagattcattaacatctatatgaatgtgg 94
Query: 129 gaaatactagaa 140
| ||| ||||||
Sbjct: 95 gcaatgctagaa 106
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | |||| |||| |||||||||||||||| |||||||| ||
Sbjct: 81 gatgttaatgaatctaggcatatatgtatgcctagattcattaacatatatatgaatatg 22
Query: 128 ggaaatactagaa 140
|| ||| ||||||
Sbjct: 21 ggcaatgctagaa 9
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||||||| |||||||| || | ||| |||||| |||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 158 cggatgaagta 168
| || ||||||
Sbjct: 15 cagaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 98 tctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
||||||||||||| |||| |||||||| |||| ||| |||||| | |||||||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 158 cgga 161
||||
Sbjct: 130 cgga 133
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 114 tcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 157
|||||||||||||| |||||||||||||||||| ||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaa 105
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaat 133
||||||||||||||| |||||||||||||||||||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaat 6
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactag 138
|||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 99 ctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||||||||| |||||||||||| ||| |||| |||||||||||| ||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 159 gga 161
|||
Sbjct: 122 gga 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgttaatgaatcta 83
|||||||||||||||| ||| || ||||| |||| || | ||||||| |||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatcta 63
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
||||| ||||||||||||||| ||| ||||| || |||| |||| |||||||||||| ||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 151 tgtgaaacgga 161
| |||||||||
Sbjct: 22 tatgaaacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||| | ||| ||||||||||||| ||| ||||||||| ||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 83 atatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatg 142
|||| ||| |||||||||||||||| ||||||| ||| |||||||| |||| |||||||
Sbjct: 53 atatggatgtatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatg 112
Query: 143 acttatattgtgaaacgga 161
||||| ||| | |||||||
Sbjct: 113 acttacattataaaacgga 131
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||| ||||||||||| ||||| |||||||||||| ||| |||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 25 gtttcacaatgtaagtaattgtaacatttctcacatt 61
|||||| ||||||||| ||| ||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctaacatttctcacatt 51
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||||||| ||||||||| |||||||||||| ||| |||||| | |||| |||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 156 aacgga 161
||||||
Sbjct: 128 aacgga 133
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 97 gtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaa 156
||||||||||||||||||| ||||| ||||||| ||| ||||||||| ||| ||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 157 ac 158
||
Sbjct: 121 ac 122
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||| || |||| ||| ||||||||||||| ||| ||||||||| ||||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
||||| ||||||||||||||||||||| |||||||||||| ||| |||||| | ||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 149 attgtgaaac 158
||| ||||||
Sbjct: 113 attatgaaac 122
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 67.9 bits (34), Expect = 5e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||| |||| ||||||| ||||| |||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacgga 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||| |||| ||||||| ||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 67.9 bits (34), Expect = 5e-11
Identities = 79/93 (84%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtcta--gattcattaacatcaatatgaatg 125
|||||||||||||||||| | | |||| ||| || |||||||||||||| |||||||||
Sbjct: 107 gatgttaatgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatg 48
Query: 126 tgggaaatactagaatgacttatattgtgaaac 158
|||| ||| |||||| | |||||| | ||||||
Sbjct: 47 tgggcaattctagaaagtcttataatatgaaac 15
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtcta--gattcattaacatcaatatgaatg 125
|||||||||||||||||| | | |||| ||| || |||||||||||||| |||||||||
Sbjct: 58 gatgttaatgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatg 117
Query: 126 tggg 129
||||
Sbjct: 118 tggg 121
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
|||| |||||||||||| ||||||||||||| ||||||||||||| | ||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtata 3
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 117 atatgaatgtgggaaatactagaatgacttatattgtgaaacgg 160
|||| |||||||||||| ||||||||||||| ||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 122 aatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||| ||||||||||||| |||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacgga 142
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||||||| ||||||||||||| ||| |||||| | |||| ||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 160 ga 161
||
Sbjct: 132 ga 133
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||||||| ||||||||||||| ||| |||||| | |||||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 160 gatgaagta 168
|| ||||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||||||||| ||| ||| ||||| ||||||||||||| ||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
||||||||||| ||||||||||||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagttattgtataatttctcacatt 51
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 116 aatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
|||||||||||| ||||| || ||| ||||| ||||||||||||| ||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacatt 61
||||||||||| ||||||||||||||| |||||| ||||| ||||||
Sbjct: 140 tacttcctccg-tttcacaatgtaagttattgtagaatttcccacatt 94
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||| |||| ||||||| ||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 113 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
|||||||||||||||| |||| ||||||| ||||| |||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 118
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
||||||||||||||||||| |||||||||||| ||| |||||| | |||| ||| |||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 156 aacggatgaagta 168
|||||| ||||||
Sbjct: 144 aacggaggaagta 156
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 99 ctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
|||||||||||||||||||||||||| | || ||| |||||| | |||| ||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 159 gga 161
|||
Sbjct: 14 gga 12
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||||||||||| ||||||||||||| ||| |||||| | |||||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 160 gatgaagta 168
|| ||||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||||||||||||||||| | |||||||| | ||| |||||| | |||| |||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 156 aacggatgaagta 168
|||||| ||||||
Sbjct: 17 aacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 99 ctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaac 158
||||||||||||||||| ||||| ||||||| ||| |||||| | |||| ||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 159 gga 161
|||
Sbjct: 138 gga 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccggtttcacaatgtaagtaattgtaacatttctcacattgaaattgatgtt 73
||||||||||| |||||||||||||| || || |||| |||||||| | | ||||||
Sbjct: 5 tacttcctccg-tttcacaatgtaagactttctagcattgctcacattcacttagatgtt 63
Query: 74 aatgaatcta 83
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 89 atatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttat 148
||||||||||||||||| |||||||| ||||||||||||| ||| | |||| | |||||
Sbjct: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttat 25
Query: 149 attgtgaaacggatgaagtat 169
| ||||||||| |||||||
Sbjct: 24 aacttgaaacggaggaagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
|||||||| |||||| | | |||||| || | |||||||||||||| ||||||||||||
Sbjct: 59 atgttaataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgg 118
Query: 129 gaaatactagaatgacttata 149
| ||| |||||| | ||||||
Sbjct: 119 gcaatgctagaaagtcttata 139
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 103 attcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||||| |||||||||||||||||||||| ||| |||||||| |||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 119 atgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||| ||||| ||||||||| ||| |||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacgga 12
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | ||| |||| |||||||||||||| ||| | || ||||||
Sbjct: 56 gatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtg 115
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
| ||| ||| || | |||| ||||||||||||| ||||||
Sbjct: 116 gacaatgctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 72 ttaatgaatctatatagatatatatgtctagattcattaacatcaatat 120
|||||||||||| ||| || ||| | |||||||||||||||||| ||||
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacatctatat 51
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||| ||||||| | || || |||||||||||||| ||||| || |||| |||
Sbjct: 58 gatgttaatggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtg 117
Query: 128 ggaaatactagaatgacttatattgtgaaacggatgaagta 168
|| ||| |||||| | |||||||| |||| |||| ||||||
Sbjct: 118 ggcaatgctagaaagtcttatattatgaagcggaggaagta 158
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaa 140
|||| |||||||||||||||||| ||||||||||||| ||| ||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtggg 129
|||||||||||||||||||| |||||||||||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtggg 97
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 114 tcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||| || ||||||||| ||||||||||||| |||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 135 ctagaatgacttatattgtgaaacggatgaagta 168
||||||||||||||||||||||||||| ||||||
Sbjct: 71 ctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 123 atgtgggaaatactagaatgacttatattgtgaaacggatgaagtata 170
||||||||||| ||||||||||||| |||||| |||||| ||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagtata 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 ctagaatgacttatattgtgaaacgga 161
||||||||||||| |||||||||||||
Sbjct: 61 ctagaatgacttacattgtgaaacgga 87
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 74 aatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaat 133
|||||||||| | | |||| | ||||||||||||||||||| ||||||||||||| ||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaag 40
Query: 134 actagaatgacttatattgtgaaacggatgaagtat 169
|||||| | |||| ||| |||||| || |||||||
Sbjct: 39 gctagaaagtcttacattatgaaaccgaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| | | | |||||||| |||||||||| | ||| ||||||||||||
Sbjct: 59 atgttaatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgg 118
Query: 129 gaaatactagaatgacttatattgtgaaac 158
| ||| ||| || | |||| ||| ||||||
Sbjct: 119 gcaatgctaaaaagtcttacattatgaaac 148
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 69 atgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgg 128
||||||||||||||| | | ||| | || ||||||||||||||||| ||||||||||||
Sbjct: 35 atgttaatgaatctagacatgtatgtgtgcctagattcattaacatctatatgaatgtgg 94
Query: 129 gaaatactagaa 140
| ||| ||||||
Sbjct: 95 gcaatgctagaa 106
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 68 gatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtg 127
|||||||||||||||| | | ||| |||||||||||||||||||| |||||||||||
Sbjct: 81 gatgttaatgaatctaggcacacatacatgtctagattcattaacatatatatgaatgtg 22
Query: 128 g 128
|
Sbjct: 21 g 21
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 123 atgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||| ||||||||||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtg 154
|||||||||||||||||| | ||||||||||||| ||| |||||| | |||||| | ||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 19
Query: 155 aaacgga 161
|||||||
Sbjct: 18 aaacgga 12
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 95 atgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtg 154
|||||||||||||||||| | ||||||||||||| ||| |||||| | |||||| | ||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 114
Query: 155 aaacgga 161
|||||||
Sbjct: 115 aaacgga 121
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 100 tagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 159
|||||| ||||||||| | ||||||||| | |||| ||||| | ||||||||||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 160 ga 161
||
Sbjct: 116 ga 117
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 132 atactagaatgacttatattgtgaaacggatgaagtat 169
|||||||||||||||| ||||||||||||| |||||||
Sbjct: 41 atactagaatgacttacattgtgaaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 122 aatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacgga 82
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 93 atatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattg 152
|||||| |||||||| ||||||| | |||||||||| || | |||||| | |||| ||||
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgtggcaa-tgctagaaagtcttacattg 123
Query: 153 tgaaacggatgaagtata 170
||||||||| ||||||||
Sbjct: 124 tgaaacggaggaagtata 141
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
||||||||||| |||||||| |||||||||||| ||| |||||| | |||| ||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 156 aacgga 161
||||||
Sbjct: 96 aacgga 101
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 130 aaatactagaatgacttatattgtgaaacg 159
||||||||||||||||||||||||||||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacg 14
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 124 tgtgggaaatactagaatgacttatattgtgaaacggatgaagtat 169
||||| |||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagtat 109
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 119 atgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||| ||||||| ||| ||||||||| |||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 86 tagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgact 145
||||| ||||||| |||||||||||||||| || | ||||||| ||| |||||| ||
Sbjct: 87 tagatgtatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatct 28
Query: 146 tatattgtgaaacggatgaagtataa 171
|| ||||||||||||| | |||||||
Sbjct: 27 tacattgtgaaacggagggagtataa 2
Score = 44.1 bits (22), Expect = 7e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 119 atgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagta 168
||||||||| | ||| |||||| | ||||||||||| |||||| ||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 96 tgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtga 155
|||||| ||||||||||||| ||||||||||||| ||| ||| || | ||| ||| |||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 156 aacggatgaagtataat 172
|||||| | ||||||||
Sbjct: 130 aacggagggagtataat 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 111 acatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 161
||||| ||||||||||||| ||| |||||| | |||| ||| |||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 73 taatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaa 132
||||||||||| | | |||| | || |||||||||||| ||| ||||||||||||| ||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122
Query: 133 tactagaatgacttatattgtgaaacgga 161
| |||||| | |||| ||| |||||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacgga 151
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 91 atatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatat 150
|||||||||||||||||||| ||| |||| |||||||| || |||||| | |||| ||
Sbjct: 82 atatatgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacat 23
Query: 151 tgtgaaacggatgaagtata 170
| |||||| || ||||||||
Sbjct: 22 tatgaaacagaggaagtata 3
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 92 tatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatatt 151
||||| |||||||||| ||| || |||| |||||| ||||| ||||||||||||||||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatatt 22
Query: 152 gtgaaacggatgaagta 168
||||||| | ||||||
Sbjct: 21 atgaaacgaaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 123 atgtgggaaatactagaatgacttatattgtgaaacgga 161
||||||||||| ||||||||||||| ||| |||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacgga 121
