miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 260 bits (131), Expect = 5e-69
Identities = 143/147 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||| ||||
Sbjct: 31 gacttatattgtgaaacggagggagta 5
Score = 196 bits (99), Expect = 6e-50
Identities = 143/155 (92%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 1 attatactccctccgtttcacaatataagtcattctattatttcccacattcatattgat 60
Query: 61 gttaatgaaacttaaatagatgt-agtttcattaacatcaatatgaatgtgggaaataat 119
||||||||||| || || || | |||||||||||||||||||| ||||||||||||| |
Sbjct: 61 gttaatgaaac-tacatctatttaagtttcattaacatcaatataaatgtgggaaatact 119
Query: 120 agaatgacttatattgtgaaacggaggaagtagaa 154
||||||||||| |||||||||||||||||||||||
Sbjct: 120 agaatgacttacattgtgaaacggaggaagtagaa 154
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 168 bits (85), Expect = 1e-41
Identities = 133/148 (89%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || ||| | ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 89 atgaatctagaatg--tctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| |||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagtag 4
Score = 143 bits (72), Expect = 8e-34
Identities = 131/148 (88%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || | | | | ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatct-agacat-tctagattcattaacatcaatatgaatgtgggaaatgctagaat 122
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| ||||||||||||||| |||||
Sbjct: 123 gacttacattgtgaaacggagggagtag 150
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 159 bits (80), Expect = 1e-38
Identities = 132/148 (89%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 65 atgaaacttaa-atagatgtagtttcattaacatcaatatgaatgtgggaaataatagaa 123
||||| || | ||| || ||| ||||||| |||||||||||||||||||||| |||||
Sbjct: 92 atgaatctagacatatatctagattcattagcatcaatatgaatgtgggaaatgctagaa 33
Query: 124 tgacttatattgtgaaacggaggaagta 151
||||||| ||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 132/150 (88%), Gaps = 3/150 (2%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 65 atgaaacttaaatagatgt--agtttcattaacatcaatatgaatgtgggaaataataga 122
||||| || | ||| |||| || ||||||| ||||||||||||||| |||||| ||||
Sbjct: 65 atgaatct-agatatatgtctagattcattagcatcaatatgaatgtaggaaatgctaga 123
Query: 123 atgacttatattgtgaaacggaggaagtag 152
|||||||||||||||||||||||| |||||
Sbjct: 124 atgacttatattgtgaaacggagggagtag 153
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 155 bits (78), Expect = 2e-37
Identities = 133/149 (89%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| |||||||||||| |||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 65 atgaaacttaaatagatgt--agtttcattaacatcaatatgaatgtgggaaataataga 122
||||| || | | |||||| || |||||| ||||||||||||||||||||||| |||||
Sbjct: 92 atgaatct-agacagatgtctagattcattgacatcaatatgaatgtgggaaatgataga 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||| ||||||||||||||| ||||||||| || |||||||||||| ||||||||
Sbjct: 1 attatacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgat 60
Query: 61 gttaatgaaacttaa-atagatgtagtttcattaacatcaatatgaatgtgggaaataat 119
|| |||||| || | || | ||| |||||| ||||||||||||||||||||||| |
Sbjct: 61 gtcaatgaatctagacatctgtctagattcattgacatcaatatgaatgtgggaaatgct 120
Query: 120 agaatgacttatattgtgaaacggaggaagtagaa 154
||||||||||| ||| ||||||||||| |||||||
Sbjct: 121 agaatgacttacattatgaaacggagggagtagaa 155
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 138/156 (88%), Gaps = 9/156 (5%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgta---gt-----ttcattaacatcaatatgaatgtgggaaat 116
||||| || | |||||| || || ||||||||||||||||||||||||||||||
Sbjct: 65 atgaatct-agatagatatatatgtctacattcattaacatcaatatgaatgtgggaaat 123
Query: 117 aatagaatgacttatattgtgaaacggaggaagtag 152
| |||||||||||| |||||||||||||||||||||
Sbjct: 124 attagaatgacttacattgtgaaacggaggaagtag 159
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 65 atgaa-----acttaaatag--atgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| || ||| ||||||||||||||||||||||||||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 153 bits (77), Expect = 8e-37
Identities = 135/153 (88%), Gaps = 6/153 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 65 atgaaacttaa---atagatgt---agtttcattaacatcaatatgaatgtgggaaataa 118
||||| || || || |||| || ||||||||||||||||||||||||||||||
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 132/153 (86%), Gaps = 6/153 (3%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaaact------taaatagatgtagtttcattaacatcaatatgaatgtgggaaataa 118
||||| || || ||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 151 bits (76), Expect = 3e-36
Identities = 130/148 (87%), Gaps = 5/148 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||||
Sbjct: 86 atgaaac-----tagacatagattcattaacatcaatatgaatgtggaaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| ||| |||||||||||||||||
Sbjct: 31 gacttacattatgaaacggaggaagtag 4
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || | | |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatct-----atgtctagtttcattaacatcaatatgaatgtgggaaatgctagaat 119
Query: 125 gacttatattgtgaaacggaggaagtaga 153
|||||| |||||||||| |||| ||||||
Sbjct: 120 gacttacattgtgaaaccgagggagtaga 148
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||| | || |||| ||| | |||||||||||||||||||||||||||| ||||
Sbjct: 63 taatgtatct-----agatatagatacattaacatcaatatgaatgtgggaaatgctaga 117
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| |||||| |||||||||||||
Sbjct: 118 atgacttacattgtggaacggaggaagta 146
Score = 123 bits (62), Expect = 7e-28
Identities = 128/150 (85%), Gaps = 5/150 (3%)
Strand = Plus / Minus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||| |||||||| |||||| ||||||||| ||| |||||||||||| |||||||||
Sbjct: 149 ttatacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatg 90
Query: 62 ttaatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatag 121
|||||| | || | || ||| | ||||||||||||||||||||||| |||| |||
Sbjct: 89 ttaatgtatct-----atatctagatacattaacatcaatatgaatgtggaaaatgctag 35
Query: 122 aatgacttatattgtgaaacggaggaagta 151
||||||||| ||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 135/153 (88%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaaacttaaatag----atgt--agtttcattaacatcaatatgaatgtgggaaataa 118
||||| | || |||| |||| || ||||||||||||||||| || |||||||||
Sbjct: 65 atgaatc-tagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgc 123
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||||||||
Sbjct: 124 tagaatgacttatattgtgaaacggaggaagta 156
Score = 143 bits (72), Expect = 8e-34
Identities = 134/153 (87%), Gaps = 5/153 (3%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 64 aatgaaact-taaata----gatgtagtttcattaacatcaatatgaatgtgggaaataa 118
|||||| || | ||| || ||| ||||||||||||||||||||||||||||||
Sbjct: 97 aatgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 145 bits (73), Expect = 2e-34
Identities = 129/147 (87%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||| |||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || ||| | ||| ||||||||||| ||||| |||||||||||| ||||||
Sbjct: 88 atgaa---tatatatgtctagattcattaacattaatataaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 124/141 (87%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgt 62
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||||| || | | || || |||||||||||||||||||||||||||||| ||||
Sbjct: 63 taatgaatct---agacatatatattcattaacatcaatatgaatgtgggaaatgctaga 119
Query: 123 atgacttatattgtgaaacgg 143
|||||||| ||||||||||||
Sbjct: 120 atgacttacattgtgaaacgg 140
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 135/157 (85%), Gaps = 7/157 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||| |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||||||| ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtagaa 154
|| |||||||||||||||||||||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagtagaa 161
Score = 121 bits (61), Expect = 3e-27
Identities = 131/155 (84%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| |||||||||||||||||||||||||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|| ||||||||| ||||||||||||||| |||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/156 (85%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||
Sbjct: 160 tatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgt 101
Query: 63 taatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaa 115
||||||| || || || || ||| |||||||||||||||||| |||||| |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaa 41
Query: 116 taatagaatgacttatattgtgaaacggaggaagta 151
| |||||||||||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 130/154 (84%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| |||||||||| ||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||||||| ||||||||||||| |||
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||||||||||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagtag 4
Score = 119 bits (60), Expect = 1e-26
Identities = 130/154 (84%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| || ||| |||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%), Gaps = 5/149 (3%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| ||| |||| ||| |||||||||||| |
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatat 89
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||||| || | || ||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 88 taatgaatct-----acatctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||| ||||||
Sbjct: 33 atgacttacattgtgaaacggaagaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 120/140 (85%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatgaaac 71
||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||| |
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 72 ttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttat 131
| |||||||| |||||||| |||||||| ||| ||| |||| ||||||||||||
Sbjct: 72 t-----agatgtagattcattaatatcaatataaatatggaaaatgctagaatgacttac 126
Query: 132 attgtgaaacggaggaagta 151
||||||||||||||| ||||
Sbjct: 127 attgtgaaacggagggagta 146
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%), Gaps = 5/149 (3%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| ||| |||| ||| |||||||||||| |
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatat 89
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||||| || | || ||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 88 taatgaatct-----acatctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||| ||||||
Sbjct: 33 atgacttacattgtgaaacggaagaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 119/140 (85%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatgaaac 71
||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||| |
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 72 ttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttat 131
||||||||| |||||||| |||||||| ||| ||| |||| || |||||||||
Sbjct: 72 -----tagatgtagattcattaatatcaatataaatatggaaaatgctataatgacttac 126
Query: 132 attgtgaaacggaggaagta 151
||||||||||||||| ||||
Sbjct: 127 attgtgaaacggagggagta 146
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagtag 159
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 65 atgaaact---taaataga----tgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || |||||| | | ||| ||||||||||||||||||||| ||| ||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 132/154 (85%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||||| ||||||||||||||||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 129/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| ||||||| ||||||||| ||||||||||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|| ||||||||| ||||||||||||||| |||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagtag 159
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 135/158 (85%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
||||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatttttcacatttatattgatga 101
Query: 63 taatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaa 115
||||||| || || || || ||| ||||||||||| |||||||||||||||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaa 41
Query: 116 taatagaatgacttatattgtgaaacggaggaagtaga 153
| || ||||||||||||||||||||||||||||||||
Sbjct: 40 tgctacaatgacttatattgtgaaacggaggaagtaga 3
Score = 111 bits (56), Expect = 3e-24
Identities = 129/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| ||||||| ||||||||| |||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
||||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 135 bits (68), Expect = 2e-31
Identities = 127/147 (86%), Gaps = 11/147 (7%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || ||| || |||||||| |||||||||||||||||| ||||||
Sbjct: 80 atgaatct---atacat--------attaacattaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 123/147 (83%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| | | ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 65 at-----------atgtatagattcattaacatcaatatgaatgtgggaaatgctagaat 113
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||| ||||
Sbjct: 114 gacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%), Gaps = 5/147 (3%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| || |||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||| ||| ||||||||||||||||||||| | | |||| ||||||
Sbjct: 65 atgaatct-----agatctagattcattaacatcaatatgaatatagtaaatgctagaat 119
Query: 125 gacttatattgtgaaacggaggaagta 151
||||||||||||| |||||||||||||
Sbjct: 120 gacttatattgtggaacggaggaagta 146
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%), Gaps = 5/148 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| |||||||| |||||||||||||||| ||| |||| | | ||| ||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||| ||| |||||||||||||||||||||||||||||| || |||
Sbjct: 86 atgaatct-----agatctagattcattaacatcaatatgaatgtgggaaatggtaaaat 32
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| ||| ||||||||||| |||||
Sbjct: 31 gacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%), Gaps = 5/147 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| || |||||||||||| ||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||| ||| ||||||||||||||||||||| | | |||| ||||||
Sbjct: 86 atgaatct-----agatctagattcattaacatcaatatgaatatagtaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
||||||||||||| |||||||||||||
Sbjct: 31 gacttatattgtggaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%), Gaps = 5/148 (3%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| |||||||| |||||||||||||||| ||| |||| | | ||| ||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||| ||| |||||||||||||||||||||||||||||| || |||
Sbjct: 65 atgaatct-----agatctagattcattaacatcaatatgaatgtgggaaatggtaaaat 119
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| ||| ||||||||||| |||||
Sbjct: 120 gacttacattatgaaacggagggagtag 147
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 129 bits (65), Expect = 1e-29
Identities = 128/148 (86%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||||||| ||||||||| ||| ||||| |||||| ||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|||||||| | || || ||||||||||||||||||||||||| |||| ||||||
Sbjct: 89 atgaaactatgtcacat--agattcattaacatcaatatgaatgtggaaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| ||| |||||||||||||||||
Sbjct: 31 gacttacattatgaaacggaggaagtag 4
Score = 123 bits (62), Expect = 7e-28
Identities = 128/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || | || |||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 65 atgaatct--atgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaat 122
Query: 125 gacttatattgtgaaacggaggaagtaga 153
|||||| |||||||||| |||| ||||||
Sbjct: 123 gacttacattgtgaaaccgagggagtaga 151
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 129 bits (65), Expect = 1e-29
Identities = 129/149 (86%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 64 aatgaaact-taaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
|||||| || | ||| || || ||||||| ||||||| | |||||| ||||| || |
Sbjct: 93 aatgaatctagagatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaa 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 127/149 (85%), Gaps = 3/149 (2%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| ||||| |||||||| ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 65 atgaaacttaaataga--tgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||| || ||| ||| | | ||| ||||||| ||||||||| ||||||| |||| || |
Sbjct: 65 atg-aatttagatatatctctagattcattagcatcaatataaatgtggaaaatgctaaa 123
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||| ||||
Sbjct: 124 atgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 127 bits (64), Expect = 5e-29
Identities = 126/147 (85%), Gaps = 11/147 (7%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || ||| || |||||||| |||||||||||||||||| ||||||
Sbjct: 80 atgaatct---atacat--------attaacattaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 122/147 (82%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| | | ||| ||||||||||||||||||||||||| |||| ||||||
Sbjct: 65 at-----------atgtatagattcattaacatcaatatgaatgtggaaaatgctagaat 113
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||| ||||
Sbjct: 114 gacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 125 bits (63), Expect = 2e-28
Identities = 126/147 (85%), Gaps = 10/147 (6%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||| ||||| ||| ||||| |||||| ||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | ||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 81 atgaatc---aat-------gattcattaacatcaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 124/147 (84%), Gaps = 10/147 (6%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | || || |||||||||||||||||||||||| ||||| ||||||
Sbjct: 65 atgaatc----attga------ttcattaacatcaatatgaatgtgagaaatgctagaat 114
Query: 125 gacttatattgtgaaacggaggaagta 151
|| ||| ||||||||||||||| ||||
Sbjct: 115 gaattacattgtgaaacggagggagta 141
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/155 (84%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| | | |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||| ||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagtag 159
Score = 111 bits (56), Expect = 3e-24
Identities = 129/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||| ||||||| ||||||||| ||| |||||||||||| |||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| ||||||||||||||||| ||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
| ||||||||| ||||||||||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 124/147 (84%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|||| || ||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 65 atga-----------atctagattcattaacatcaatatgaatatgggaaatgctagaat 113
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||| ||||||||||||||||
Sbjct: 114 gacttacattatgaaacggaggaagta 140
Score = 107 bits (54), Expect = 4e-23
Identities = 123/148 (83%), Gaps = 11/148 (7%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||| ||| ||||||||| ||| |||||||| ||| |||||||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 64 aatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaa 123
|||||| || || ||||||||||||||||||||| |||||||| |||||
Sbjct: 81 aatgaatct-----------agattcattaacatcaatatgaatatgggaaatgctagaa 33
Query: 124 tgacttatattgtgaaacggaggaagta 151
||||||| ||||||||||||||| ||||
Sbjct: 32 tgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 130/154 (84%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||| ||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||| |||||||| ||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 132/156 (84%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 65 atgaaacttaa-----atagatgt--agtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| |||| || |||||||||| |||||| ||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtaga 153
|||||||||||| ||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtaga 3
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 130/154 (84%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| |||||||| |||||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 129/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| ||| |||||||||||| |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 64 aatgaaact-----taaatagatg--tagtttcattaacatcaatatgaatgtgggaaat 116
||||| || || ||||||| ||| |||||||||||| ||||||||||| |||||
Sbjct: 99 gatgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaat 40
Query: 117 aatagaatgacttatattgtgaaacggaggaagta 151
||| ||||||||| | ||||||||||||| ||||
Sbjct: 39 gataaaatgacttacaatgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||| | ||||||||| || ||||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| || ||| ||||| |||||| |||||||||||||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%), Gaps = 5/152 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||| |||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 65 atgaa-----acttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataat 119
||||| || || ||| | || ||||||||||||||||||||||| | |||| |
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 120 agaatgacttatattgtgaaacggaggaagta 151
||||||||||| |||||| |||||||||||||
Sbjct: 36 agaatgacttacattgtggaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%), Gaps = 5/154 (3%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| |||||||| |||||| ||||||||| ||| |||| | ||||| ||||||||||
Sbjct: 3 tatacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgt 62
Query: 63 taatgaa-----acttaaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||||| || || ||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 63 taatgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| |||||| |||||||| ||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||| ||||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 65 atgaaacttaa-----atagatgt--agtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| |||| || ||||||||||||| ||||||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtag 4
Score = 119 bits (60), Expect = 1e-26
Identities = 130/154 (84%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||| |||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 65 atgaa-----acttaaatagatg--tagtttcattaacatcaatatgaatgtgggaaata 117
||||| ||||| ||| ||| ||| ||||||| |||| |||||||||||| |||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
||||||||| || ||||||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||
Sbjct: 94 ttcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 117 bits (59), Expect = 5e-26
Identities = 125/149 (83%), Gaps = 16/149 (10%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||
Sbjct: 137 tatactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgt 78
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||||| | |||| |||||||||||||||||||| |||| ||||
Sbjct: 77 taatgaatc-----taga-----------taacatcaatatgaatgtggaaaatgctaga 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 121/147 (82%), Gaps = 16/147 (10%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
| ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 65 ----------------tctagattcattaacatcaatatgaatgtgggaaatgttagaat 108
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||| ||||
Sbjct: 109 gacttatattgtgaaacggagggagta 135
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 115 bits (58), Expect = 2e-25
Identities = 127/147 (86%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| || ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| ||| || |||||| || || || |||||||||||||||||||||| || |||
Sbjct: 85 at-aaatctagatagatcta---tc--tatcatcaatatgaatgtgggaaatgctaaaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 122/147 (82%), Gaps = 6/147 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| || || || ||| || |||||||||||||| ||| || ||||| ||||||
Sbjct: 65 --ga----tagatctatctagatttattaacatcaatataaatatgagaaatgctagaat 118
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||| ||||
Sbjct: 119 gacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 115 bits (58), Expect = 2e-25
Identities = 125/148 (84%), Gaps = 7/148 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| |||| ||| |||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | | ||| || || |||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatttg-------tctagatttatgaacatcaatatgaatgtgggaaatgctagaat 117
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| |||||||||||||||||||||
Sbjct: 118 gacttacattgtgaaacggaggaagtag 145
Score = 95.6 bits (48), Expect = 2e-19
Identities = 123/147 (83%), Gaps = 7/147 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| || || ||| | ||||| |||||||||||||||||||||||| ||||||
Sbjct: 84 ataaatct-----agacaaa--ttcatgaacatcaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
| |||| ||||||||||||||| ||||
Sbjct: 31 ggcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 115 bits (58), Expect = 2e-25
Identities = 128/151 (84%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| | |||||||||||| ||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 65 atgaaact----taaatagatgtagtttcattaacatcaatatgaatgtgggaaataata 120
||| | || || || || ||| ||||||| |||||||||||||||||||||| ||
Sbjct: 95 atggatctagactatatctatctagattcattagtatcaatatgaatgtgggaaatacta 36
Query: 121 gaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||||||
Sbjct: 35 gaatgacttatattgtgaaacggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 130/153 (84%), Gaps = 6/153 (3%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 65 atgaaacttaaatagatgtagt-----ttcattaacatcaatatgaatgtgggaaataat 119
||||| | || |||||| |||| | |||| |||||||||||||||||||||| |
Sbjct: 65 atgaatc-tagatagatatagtctagatccattggcatcaatatgaatgtgggaaatggt 123
Query: 120 agaatgacttatattgtgaaacggaggaagtag 152
|||||||||| ||| ||||||||||| |||||
Sbjct: 124 ggaatgacttacattatgaaacggagggagtag 156
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 115 bits (58), Expect = 2e-25
Identities = 125/147 (85%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| |||| | ||| |||||||||||||||||||||||| |||||| || |||
Sbjct: 65 ata----ttaatgttgtctagattcattaacatcaatatgaatgtgagaaatactaaaat 120
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||| ||||
Sbjct: 121 gacttacattgtgaaacggagggagta 147
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 65 atgaa 69
|||||
Sbjct: 87 atgaa 83
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 124/147 (84%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| | | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 65 atgaatct-----agat--------attaacatcaatatgaatgtaggaaatagtagaat 111
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||
Sbjct: 112 gacttatattgtgaaacggaggaagta 138
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||||||||||||| || ||||||| ||||| ||||||||||
Sbjct: 140 tatacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgt 81
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
|||| || ||| ||||||||||||||||||||| | | |||| ||||
Sbjct: 80 taat-------------atctagattcattaacatcaatatgaatatagaaaatgctaga 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 132/156 (84%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| ||| |||| ||||||| ||||| || ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 64 aatgaaact---taaatagatgt----agtttcattaacatcaatatgaatgtgggaaat 116
||| || | |||||| || | || ||||||||||||||||||||||||||||||
Sbjct: 64 aataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaat 123
Query: 117 aatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtag 159
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 65 atgaa 69
|||||
Sbjct: 98 atgaa 94
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 113 bits (57), Expect = 7e-25
Identities = 131/155 (84%), Gaps = 8/155 (5%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||| ||||| ||||| ||| |||| ||||||||||| |||||||| ||
Sbjct: 4 atactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatt 62
Query: 64 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 116
|||||| || || ||| | ||| ||||||||||||||||||||||||| ||||
Sbjct: 63 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaat 122
Query: 117 aatagaatgacttatattgtgaaacggaggaagta 151
| |||||||||||| ||||||||||||||| ||||
Sbjct: 123 attagaatgacttacattgtgaaacggagggagta 157
Score = 107 bits (54), Expect = 4e-23
Identities = 131/156 (83%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| || ||||| ||||||| ||||||||||
Sbjct: 159 tatactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgt 100
Query: 63 taatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaa 115
||||||| || || || || ||| |||||||| ||||||||||||||||||||
Sbjct: 99 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Query: 116 taatagaatgacttatattgtgaaacggaggaagta 151
| |||||| ||||| ||||| ||||||||| ||||
Sbjct: 39 -actagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| |||||||| || |||||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgc 62
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||||| | ||||| || ||||||| ||||||||||||||| | |||| ||||
Sbjct: 63 taatgaatc-----tagatctaaattcattagcatcaatatgaatgtagaaaatgctaga 117
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||| ||| ||||||||||||||| ||||
Sbjct: 118 atgatttacattgtgaaacggagggagta 146
Score = 99.6 bits (50), Expect = 1e-20
Identities = 124/147 (84%), Gaps = 5/147 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||| ||||| ||| |||| | ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || ||||| ||| ||||||| ||||||||| ||| || ||||| ||||||
Sbjct: 86 atgaa--tt---tagatctagattcattagcatcaatataaatatgaaaaatactagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||| ||||
Sbjct: 31 gacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 113 bits (57), Expect = 7e-25
Identities = 130/153 (84%), Gaps = 6/153 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||||||| ||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 65 atgaaact---taaatag---atgtagtttcattaacatcaatatgaatgtgggaaataa 118
||||| || || ||| || ||| ||||||| |||||||||||||||| |||||
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| |||| |||||||||||||||
Sbjct: 37 tagaatgacttacattgcgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| |||||||||| |||| ||||||||| ||| ||||| |||||| ||||||||| |
Sbjct: 4 atacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 64 aatgaaacttaa------atagatgtagtttcattaacatcaatatgaatgtgggaaata 117
|||||| || | ||| || ||| ||||||||||| ||||| ||| ||||||||
Sbjct: 64 aatgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagtag 158
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 113 bits (57), Expect = 7e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 79 gatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtga 138
||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 58 gatgtagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtga 117
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 118 aacggaggaagta 130
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 65 atgaa 69
|||||
Sbjct: 70 atgaa 66
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 132/157 (84%), Gaps = 9/157 (5%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
|| || || || ||| | ||| ||||||||||||||||||||| ||||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtagaa 154
| |||||||||| ||||||||||||||| |||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagtagaa 2
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/155 (82%), Gaps = 9/155 (5%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| || |||||||||||||| ||||| |||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagtag 157
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 111 bits (56), Expect = 3e-24
Identities = 122/147 (82%), Gaps = 14/147 (9%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| ||| | ||||||| |||||||||||||||||||||| ||||||
Sbjct: 77 ataaaa--------------gattcattaccatcaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/147 (81%), Gaps = 14/147 (9%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| ||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctt--------------ttattaacatcaatatgaatgtgggaaatgctagaat 110
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| |||||||||||||| ||||
Sbjct: 111 gacttactttgtgaaacggagggagta 137
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 111 bits (56), Expect = 3e-24
Identities = 123/147 (83%), Gaps = 15/147 (10%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| ||| ||| ||| || ||||||||||||||||||||| ||||||
Sbjct: 65 at-aaatttagataaat--------------atcaatatgaatgtgggaaatgctagaat 109
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||
Sbjct: 110 gacttatattgtgaaacggaggaagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 150 ta 151
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 132/157 (84%), Gaps = 9/157 (5%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
|| || || || ||| | ||| ||||||||||||||||||||| ||||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 118 atagaatgacttatattgtgaaacggaggaagtagaa 154
| |||||||||| ||||||||||||||| |||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagtagaa 159
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/155 (82%), Gaps = 9/155 (5%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| || |||||||||||||| ||||| |||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 129/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||| ||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||| ||||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 129/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| ||||| |||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| ||||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 109 bits (55), Expect = 1e-23
Identities = 123/146 (84%), Gaps = 6/146 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||| ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || | |||| || |||||||||||||| |||||| ||||| ||||||
Sbjct: 85 atgaatctagactaga------tttattaacatcaatataaatgtgagaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagt 150
|||||| ||| |||||||||||||||
Sbjct: 31 gacttacattatgaaacggaggaagt 6
Score = 107 bits (54), Expect = 4e-23
Identities = 121/142 (85%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatgaa 69
||||||||||| ||| ||||||||| ||| ||||| ||||||||||||||||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 70 acttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgactt 129
|| || | ||| ||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 70 tct-----ag-tctagattcattaacatcaatatgaatatggaaaatgctagaatgactt 123
Query: 130 atattgtgaaacggaggaagta 151
| ||||||||||||||| ||||
Sbjct: 124 acattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 129/152 (84%), Gaps = 5/152 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| |||||| ||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 65 atgaaact---taaatagatgt--agtttcattaacatcaatatgaatgtgggaaataat 119
||||| || || ||| |||| | ||||||||||| | ||||||||||||||||
Sbjct: 96 atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37
Query: 120 agaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||||||||||||||||
Sbjct: 36 agaatgacttatattgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 128/153 (83%), Gaps = 5/153 (3%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||||||||||||| | | |||||||||||| ||| | |||||
Sbjct: 4 atacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtt 63
Query: 64 aatgaa-----acttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataa 118
|||||| || || ||| || ||| ||||||||||| | |||||||||| ||||
Sbjct: 64 aatgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgc 123
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 124 tagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 107 bits (54), Expect = 4e-23
Identities = 125/147 (85%), Gaps = 5/147 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||| ||||| ||| |||| | ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || ||||| ||| ||||||| |||||||||||||||| |||| ||||||
Sbjct: 86 atgaa--tt---tagatctagattcattagcatcaatatgaatgtgaaaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
||||| ||||||||||||||| ||||
Sbjct: 31 aacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||| ||| ||| |||| |||||| |||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgc 62
Query: 63 taatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga 122
||||||| | ||||| || ||||||| ||||||||| ||||| | |||| || |
Sbjct: 63 taatgaatc-----tagatctaaattcattagcatcaatataaatgtagaaaatgctaaa 117
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||| ||| ||||||||||||||| ||||
Sbjct: 118 atgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 124/148 (83%), Gaps = 7/148 (4%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 64 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 116
|||||| || || ||| | ||| ||||||| ||||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaat 123
Query: 117 aatagaatgacttatattgtgaaacgga 144
| |||||||||| ||| |||||||||
Sbjct: 124 ggtggaatgacttacattatgaaacgga 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||| ||||||||| ||| ||||||||| | |||||||||||| ||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||||| |||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 68 ttcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggagg 127
Query: 147 aagtag 152
||||||
Sbjct: 128 aagtag 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 65 atgaa 69
|||||
Sbjct: 72 atgaa 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 93 aacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||||| |||| |||||||||||| ||||||||||||||| |||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 107 bits (54), Expect = 4e-23
Identities = 124/147 (84%), Gaps = 9/147 (6%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||| | |||| |||||||||||||| |||||||| ||||||
Sbjct: 65 atgaatct-----agatatc----cattgacatcaatatgaatatgggaaatgctagaat 115
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 116 gacttacattgtgaaacggaggaagta 142
Score = 95.6 bits (48), Expect = 2e-19
Identities = 122/148 (82%), Gaps = 9/148 (6%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtc 84
Query: 64 aatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaa 123
|||| | || ||| |||||||| ||||||||||||||| ||||| |||||
Sbjct: 83 aatggat---------atctagattcattaatatcaatatgaatgtgagaaatgctagaa 33
Query: 124 tgacttatattgtgaaacggaggaagta 151
||||||| ||||||||||||||| ||||
Sbjct: 32 tgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 130/156 (83%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
||||||||||||||||||||| ||||||||| | | |||||||||||||||||||||||
Sbjct: 3 tatactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 63 taatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaa 115
| ||||| || || | || ||| ||||||||||||||||| |||||||||||
Sbjct: 63 ttatgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaa 122
Query: 116 taatagaatgacttatattgtgaaacggaggaagta 151
| || ||||||||| |||||||||||||||||||
Sbjct: 123 tgctaaaatgacttactttgtgaaacggaggaagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 65 atgaaact-----taaatagatg--tagtttcattaacatcaatatgaatgtgggaaata 117
||||| || ||||| ||| ||| ||||| ||||||||||| ||||||||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
| ||||||||| |||||||||||||| ||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagt 30
||||||||||||||||||||| |||||
Sbjct: 108 atactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 129/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| ||| || | || |||| |||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 64 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 116
|||||| | || || || ||| ||||||||||||||||||||| | ||||||
Sbjct: 99 aatgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaat 40
Query: 117 aatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||| | ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 65 atgaaact-----taaatagatg--tagtttcattaacatcaatatgaatgtgggaaata 117
||||| || | ||||||| || |||||||||||||||||||||| || | ||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 63 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggagg 122
Query: 147 aagta 151
|||||
Sbjct: 123 aagta 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 65 atgaa 69
|||||
Sbjct: 67 atgaa 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttc 44
|||| ||||||||||||||| ||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 103 bits (52), Expect = 7e-22
Identities = 124/148 (83%), Gaps = 10/148 (6%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcat-tgtagtatttcccacatttatattgatgtt 63
|||||||||||||||||||| |||||||| | ||| |||||||||||| ||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 64 aatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaa 123
|||| || | ||| ||||||| |||||||||||||||||||||| || ||
Sbjct: 83 aatg---------tatagctagattcattagcatcaatatgaatgtgggaaatgctaaaa 33
Query: 124 tgacttatattgtgaaacggaggaagta 151
||||||| ||||||||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 124/149 (83%), Gaps = 10/149 (6%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga-a 123
||||| | ||| | || ||||| |||||||||||||||||||||| || | |
Sbjct: 65 atgaatc-----tagctata----cattagcatcaatatgaatgtgggaaatgctaaaca 115
Query: 124 tgacttatattgtgaaacggaggaagtag 152
||||||| ||||||||||||||| |||||
Sbjct: 116 tgacttacattgtgaaacggagggagtag 144
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 103 bits (52), Expect = 7e-22
Identities = 122/148 (82%), Gaps = 13/148 (8%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | | ||||||| |||||||||||||||||||||| ||||||
Sbjct: 78 atgaatc-------------gattcattagcatcaatatgaatgtgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||| ||||||||||||||| |||||
Sbjct: 31 gacttacattgtgaaacggagggagtag 4
Score = 101 bits (51), Expect = 3e-21
Identities = 121/147 (82%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | | ||||||| |||||||||||||||||||||| ||||||
Sbjct: 65 atgaa-------------tcgattcattagcatcaatatgaatgtgggaaatgctagaat 111
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||| ||||||||||| ||||
Sbjct: 112 gacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||| | | ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/156 (82%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 64 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 116
||||| || || ||| | ||| ||||||| ||||||||||||| | | ||||
Sbjct: 64 aatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaat 123
Query: 117 aatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||||||||||||||||||| |||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagtag 159
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 103 bits (52), Expect = 7e-22
Identities = 122/147 (82%), Gaps = 15/147 (10%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| ||| ||| ||| || ||||||||||||||||||||| ||||||
Sbjct: 65 at-aaatttagataaat--------------atcaatatgaatgtgggaaatgctagaat 109
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||||
Sbjct: 110 gacttatattgtgaaacggaggaagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||| |||||||| ||||||| |||| |||||||||||| ||||||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 150 ta 151
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 103 bits (52), Expect = 7e-22
Identities = 124/148 (83%), Gaps = 10/148 (6%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcat-tgtagtatttcccacatttatattgatgtt 63
|||||||||||||||||||| |||||||| | ||| |||||||||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 64 aatgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaa 123
|||| || | ||| ||||||| |||||||||||||||||||||| || ||
Sbjct: 65 aatg---------tatagctagattcattagcatcaatatgaatgtgggaaatgctaaaa 115
Query: 124 tgacttatattgtgaaacggaggaagta 151
||||||| ||||||||||||||||||||
Sbjct: 116 tgacttacattgtgaaacggaggaagta 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 124/149 (83%), Gaps = 10/149 (6%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataataga-a 123
||||| | ||| | || ||||| |||||||||||||||||||||| || | |
Sbjct: 83 atgaatc-----tagctata----cattagcatcaatatgaatgtgggaaatgctaaaca 33
Query: 124 tgacttatattgtgaaacggaggaagtag 152
||||||| ||||||||||||||| |||||
Sbjct: 32 tgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 126/150 (84%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||| |||||||||||||| ||||||||| ||| |||| | ||||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattttc-------atattgatgtta 91
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || | ||| | ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 90 atgaatct-agatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaat 32
Query: 125 gacttatattgtgaaacggaggaagtagaa 154
|||||| |||||||||||||| |||||||
Sbjct: 31 gacttacattgtgaaacggagagagtagaa 2
Score = 101 bits (51), Expect = 3e-21
Identities = 119/141 (84%), Gaps = 8/141 (5%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||| |||||||||||||| ||||||||| || |||||||||||| ||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | |||| | || ||| ||||||||||||||||||| |||| ||||||
Sbjct: 65 atgaatc-taaacatatctagattcattaacatcaatatga-------aaatgctagaat 116
Query: 125 gacttatattgtgaaacggag 145
|||||| ||||||||||||||
Sbjct: 117 gacttacattgtgaaacggag 137
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || | ||| |||||||||||| |||||||| |||| |||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| ||| |||| ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| ||||||||||| |||||||||||| |||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 123 tatactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgt 64
Query: 63 taatgaaa 70
||||||||
Sbjct: 63 taatgaaa 56
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 86 tttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggag 145
|||||||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||
Sbjct: 56 tttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggag 115
Query: 146 gaagta 151
| ||||
Sbjct: 116 ggagta 121
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
|||| ||||||||||||||| ||||||||| ||| |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 103 bits (52), Expect = 7e-22
Identities = 126/149 (84%), Gaps = 5/149 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| ||| |||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 65 atgaaactt---aaatagatgt--agtttcattaacatcaatatgaatgtgggaaataat 119
||||| || | ||| |||| || |||||||||||| ||||||||||||| ||| |
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 120 agaatgacttatattgtgaaacggaggaa 148
||||||||||||||| |||||||||||||
Sbjct: 36 agaatgacttatattatgaaacggaggaa 8
Score = 93.7 bits (47), Expect = 7e-19
Identities = 124/148 (83%), Gaps = 5/148 (3%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatgaa 69
||||||||||| ||||||||||||| ||| ||| |||||||| |||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 70 act-taaatagatg----tagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| | ||| ||| ||| ||||||| ||| ||| ||||||||| ||| ||||||
Sbjct: 70 tctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctagaat 129
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||||||||||||||||||| |||||
Sbjct: 130 gacttatattgtgaaacggagggagtag 157
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||| ||||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||||| ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|| ||||||||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/155 (82%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| ||||||||||| ||||||||||||| |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||
Sbjct: 75 ttcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacggagg 134
Query: 147 aagtagaa 154
||||||||
Sbjct: 135 aagtagaa 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||||||||||||| || |||| ||||||| ||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 65 atgaa 69
|||||
Sbjct: 79 atgaa 75
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 50 ttcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggagg 109
Query: 147 aagtaga 153
|||||||
Sbjct: 110 aagtaga 116
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||| ||||| ||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 65 atgaa 69
|||||
Sbjct: 54 atgaa 50
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 102 atgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 121/148 (81%), Gaps = 16/148 (10%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| ||||| |||||| | |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|||| | |||||||| |||||| |||||||||||||| ||||||
Sbjct: 65 atgaga----------------ttcattaatatcaatgtgaatgtgggaaatgctagaat 108
Query: 125 gacttatattgtgaaacggaggaagtag 152
||||||||||||||||||||||||||||
Sbjct: 109 gacttatattgtgaaacggaggaagtag 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 119/148 (80%), Gaps = 16/148 (10%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| |||||||||||| | |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||||| |||||| |||||||| ||||| ||||||
Sbjct: 75 atgaatct----------------cattaatatcaatgtgaatgtgtgaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagtag 152
|||||||||||||||||||||| |||||
Sbjct: 31 gacttatattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 89 cattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaa 148
|||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 149 gtagaa 154
||||||
Sbjct: 127 gtagaa 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 65 atg 67
|||
Sbjct: 69 atg 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagt 30
||||||||||||||||||||| |||||
Sbjct: 4 atactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 70 ttcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 129
Query: 147 aagtag 152
||||||
Sbjct: 130 aagtag 135
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 65 atgaa 69
|||||
Sbjct: 74 atgaa 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacgga 144
|||||||||||||||||| |||| | ||||||||| |||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 147 aagtag 152
||||||
Sbjct: 9 aagtag 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 69 ttcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| ||||||||| ||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 71 ttcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggagg 130
Query: 147 aagta 151
|||||
Sbjct: 131 aagta 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| ||||| |||||| ||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 65 atgaa 69
|||||
Sbjct: 75 atgaa 71
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||
Sbjct: 1 attatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Query: 61 gttaatgaa 69
|| ||||||
Sbjct: 61 gtcaatgaa 69
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 tagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||| ||| ||||||||| ||||||||| |||||| |||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 64 aatgaa 69
||||||
Sbjct: 64 aatgaa 69
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtagaa 154
|||||||||||| ||||| |||||||||||| ||| ||||| ||||| |||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagtagaa 133
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 65 atgaa 69
|||||
Sbjct: 89 atgaa 85
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggagg 144
Query: 147 aagta 151
||||
Sbjct: 145 gagta 149
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 72 ttcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagg 131
Query: 147 aagta 151
||||
Sbjct: 132 gagta 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/147 (82%), Gaps = 15/147 (10%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| | || |||||| |||||||||||| |||||||| ||||||
Sbjct: 76 atgaatc-tagatagat--------------atcaatatgaatatgggaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| |||||||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| |||||||| ||||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
||||||| |||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| |||| |||| |||||||||||||||| |||||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 64 aatgaa 69
||||||
Sbjct: 99 aatgaa 94
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || | ||| |||||||| || | ||||||||||||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 129/158 (81%), Gaps = 7/158 (4%)
Strand = Plus / Plus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||| | ||
Sbjct: 2 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttata 61
Query: 62 ttaatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaa 114
|||||||| || || ||| | ||| ||||||| |||||||||| ||||| |||
Sbjct: 62 ttaatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaa 121
Query: 115 ataatagaatgacttatattgtgaaacggaggaagtag 152
|| || ||||||||| ||||||||||||||| |||||
Sbjct: 122 atgctaaaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 88 tcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagga 147
||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 148 agta 151
||||
Sbjct: 127 agta 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 91 ttaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagt 150
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 151 a 151
|
Sbjct: 5 a 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 65 a 65
|
Sbjct: 65 a 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||| ||||||||| ||| |||||||||||| |||| ||||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 64 aatga 68
|||||
Sbjct: 71 aatga 67
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 97 tcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtag 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattga 59
|||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||
Sbjct: 3 tatactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
Score = 71.9 bits (36), Expect = 2e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 7e-19
Identities = 130/158 (82%), Gaps = 11/158 (6%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 65 atgaaact-------taaatagatgtagtttcattaacatca----atatgaatgtggga 113
||||| || || || || ||| ||||||||||||| ||||||| || ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 114 aataatagaatgacttatattgtgaaacggaggaagta 151
||| |||||||||||| ||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 98 ttcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 157
Query: 147 aagtag 152
|||||
Sbjct: 158 gagtag 163
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/147 (80%), Gaps = 17/147 (11%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||||||| ||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
||||| || |||||||||||||||||||||| |||| || |||
Sbjct: 70 atgaatct-----------------attaacatcaatatgaatgtggaaaatgctataat 28
Query: 125 gacttatattgtgaaacggaggaagta 151
||||||||||||||||| |||||||||
Sbjct: 27 gacttatattgtgaaacagaggaagta 1
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||
Sbjct: 66 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 125
Query: 147 aagta 151
||||
Sbjct: 126 gagta 130
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| |||||||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 62 ttcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggagg 121
Query: 147 aagtag 152
||||||
Sbjct: 122 aagtag 127
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||| ||||| |||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 65 atgaa 69
|||||
Sbjct: 66 atgaa 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||| ||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccac 48
|||||||||||||||||||| ||||||||| ||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccac 48
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagtag 152
|||||
Sbjct: 9 gagtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 122/148 (82%), Gaps = 7/148 (4%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| ||| |||| | | ||| || ||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 64 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 116
|||||| || || || || ||| |||||||||||||||||||||||| |||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaat 40
Query: 117 aatagaatgacttatattgtgaaacgga 144
|||||||||||| |||||||||||||
Sbjct: 39 ggtagaatgacttacattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 125/154 (81%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||| ||||||||||||| ||||||||| || ||||| |||||| ||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| | ||| |||||||| ||||| |||||| | | ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagtag 152
||||||
Sbjct: 9 aagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggag 145
|||||||||||||| ||| |||| |||||||||||| ||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/149 (83%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 65 atgaaacttaaatagatg--tagtttcattaacatcaatatgaatgtgggaaataataga 122
|||| ||| |||||| || | | |||||||||||||||||| |||| ||||
Sbjct: 92 atgagt-ttagatagatacatatgtctagatacatcaatatgaatgtggaaaatgctaga 34
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 88 tcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagga 147
|||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 148 agtag 152
|||||
Sbjct: 149 agtag 153
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
|||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 150 ta 151
||
Sbjct: 6 ta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 65 at 66
||
Sbjct: 65 at 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgta 37
||||||||||||||||||||| |||| |||||||
Sbjct: 111 atactccctccgtttcacaatgtaagccattgta 78
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagtag 152
|||||
Sbjct: 9 gagtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 3 tatactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 97 tcaatatgaatgtgggaaataatagaatgacttatattgtg-aaacggaggaagtag 152
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagtag 117
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 16 tttcacaatataagtcattgtagtatttcccacatttatattga 59
||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 65 atgaa 69
|||||
Sbjct: 79 atgaa 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||
Sbjct: 75 ttcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 134
Query: 147 aagta 151
||||
Sbjct: 135 gagta 139
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||| ||||||||| || |||| ||| ||| ||||||||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgt 62
Query: 63 taatgaa 69
|||||||
Sbjct: 63 taatgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||| || ||||| || ||||||||| ||| ||||||||||| ||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 65 atgaa 69
|||||
Sbjct: 72 atgaa 68
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 68 ttcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 127
Query: 147 aagta 151
||||
Sbjct: 128 gagta 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/153 (82%), Gaps = 5/153 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| |||||||| ||| |||| |||||| |||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 65 atgaaact-----taaatagatgtagtttcattaacatcaatatgaatgtgggaaataat 119
||||| || || ||| | | | |||||||||||| | ||||||||||||||| |
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 120 agaatgacttatattgtgaaacggaggaagtag 152
| ||||||||| |||||||||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||||||||||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/155 (81%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||| |||||||||||||||| || ||||| || ||| ||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 65 atgaaacttaa-------atagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || || ||||||| ||||||||||||| ||| |||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||||| |||| ||||||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagtag 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/156 (82%), Gaps = 9/156 (5%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| |||||||| |||| ||||||||||| |||||||| ||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 65 atgaaacttaaatagatgta--------gtttcattaacatcaatatgaatgtgggaaat 116
||||| ||| |||||| || | ||||||| ||||||||||||| || |||||
Sbjct: 65 atgaat-ttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaat 123
Query: 117 aatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||||| |||||||| |||||
Sbjct: 124 gttagaatgacttatattgtggaacggagggagtag 159
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtagaa 154
||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggatgtagtagaa 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
|||| ||||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||||| ||| |||||||| ||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/147 (82%), Gaps = 7/147 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||||||| |||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 65 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || ||| || ||| |||||||||| | |||||||||||||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 118 atagaatgacttatattgtgaaacgga 144
|||||||||||| ||| || ||||||
Sbjct: 38 ttagaatgacttacattatggaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||| |||||| || ||| ||||||||| || |||||||||||| |||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 65 atgaaact-----taaatagatgt--agtttcattaacatcaatatgaatgtgggaaata 117
||||| || || |||||||| || |||||||||| | |||||||||||| ||||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 69 ttcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 51 ttcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagg 110
Query: 147 aagta 151
|||||
Sbjct: 111 aagta 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||| ||| ||||||||| ||| |||||||||||| |||||||| ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 64 aatgaa 69
||||||
Sbjct: 56 aatgaa 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||||||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcatt 34
|||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| ||||| |||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
||||||||||||||||||||| ||||||||| ||| |||| ||| ||| ||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||| ||| |||| |||||||||||| ||||||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| ||||||||| ||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 69 ttcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttc 44
|||||||||||||||| ||| ||||||||||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtaga 153
||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtaga 134
Query: 154 a 154
|
Sbjct: 135 a 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
|||||||||||||| |||||| ||||||||| ||| |||||||| ||||||||||||| |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 64 aatgaa 69
||||||
Sbjct: 64 aatgaa 69
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||| ||||||||||||||| |||| |||| ||| |||||||||||| ||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| || |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 71 ttcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 130
Query: 147 aagta 151
|||||
Sbjct: 131 aagta 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||
Sbjct: 138 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttata 79
Query: 62 ttaatgaa 69
||||||||
Sbjct: 78 ttaatgaa 71
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||| |||||||||||| ||||||||| ||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| ||||||||||||| ||||||||| |||||||||||| ||| |||||||||||
Sbjct: 72 ttcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacggagg 131
Query: 147 aagtagaa 154
|||||||
Sbjct: 132 gagtagaa 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| |||||||||||| ||| ||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 65 atgaa 69
|||||
Sbjct: 76 atgaa 72
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||| || |||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 87.7 bits (44), Expect = 4e-17
Identities = 122/147 (82%), Gaps = 7/147 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||| ||| ||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| || | ||||| || | |||||||||| |||||||||| |||| ||||||
Sbjct: 84 ataaatc-----tagatata--tatattaacatcactatgaatgtgaaaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||| ||||||||||||||||
Sbjct: 31 gacttacattatgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 120/147 (81%), Gaps = 7/147 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| |||| |||||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
|| | ||| || ||| || |||||||||| ||||||||||||||||| ||||||
Sbjct: 65 at-------atatatatctagatttattaacatcactatgaatgtgggaaatactagaat 117
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||| ||| |||||| |||| ||||
Sbjct: 118 gacttacattatgaaacagagggagta 144
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 65 atga 68
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 88 tcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagga 147
|||||||||||||||||||||||| |||| || ||||||||| |||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 148 agta 151
||||
Sbjct: 8 agta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||| | ||| ||| |||| ||||||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 92 taacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||| |||| || ||| | ||| ||||||||||||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||||||||| |||| |||||||| |||| ||| |||||||||||
Sbjct: 66 ttcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggagg 125
Query: 147 aagtagaa 154
||||||||
Sbjct: 126 aagtagaa 133
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| |||| |||| || |||| |||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 65 atgaa 69
|||||
Sbjct: 70 atgaa 66
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||||||||||||| ||| ||||| || ||||||||||||||
Sbjct: 124 tatacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgt 65
Query: 63 taa 65
|||
Sbjct: 64 taa 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| ||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 65 a 65
|
Sbjct: 65 a 65
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 91 ttaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagt 150
||||||||||||| ||| || ||||| || |||||||||||||||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 151 a 151
|
Sbjct: 122 a 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 91 ttaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagt 150
||||||||||||| ||| || ||||| || ||||||||| ||||||||||||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 151 a 151
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 119/147 (80%), Gaps = 13/147 (8%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||| |
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtca 79
Query: 65 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 124
| || ||| ||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 78 ct-------------atctagattcattagcatcagtatgaatgtggaaaatgctagaat 32
Query: 125 gacttatattgtgaaacggaggaagta 151
|||||||||| |||||| |||||||||
Sbjct: 31 gacttatattatgaaacagaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||||||||| || ||||||||| ||| ||||||||||| |||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| |||| |||||| ||||||||||||| ||| |||| ||||||| ||| |||||
Sbjct: 3 tatacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgc 62
Query: 63 taatgaa 69
|||||||
Sbjct: 63 taatgaa 69
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 131/161 (81%), Gaps = 7/161 (4%)
Strand = Plus / Minus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||| ||| ||||||||| ||| ||| |||| ||| |||| |||
Sbjct: 162 attatactccctccgtttcataatgtaagtcattctagcattacccatattcatatagat 103
Query: 61 gttaatgaaacttaaa-------tagatgtagtttcattaacatcaatatgaatgtggga 113
||||||||| || | || || || |||||||||||| ||||| |||||||
Sbjct: 102 gttaatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggc 43
Query: 114 aataatagaatgacttatattgtgaaacggaggaagtagaa 154
||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagtagaa 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| ||| ||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 65 atgaaacttaa-atagatgt------agtttcattaacatcaatatgaatgtgggaaata 117
||||| | | |||||||| || |||||||||||| |||||||| |||| |||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||| ||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtca 32
|||||||||||||||||||| |||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtca 84
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagtag 152
|||| ||||||| ||||||||||||||| |||||
Sbjct: 79 tagattgacttacattgtgaaacggagggagtag 112
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/110 (85%), Gaps = 7/110 (6%)
Strand = Plus / Minus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatgaaacttaa-----atagat 81
|||||||| ||| |||||||||||| ||||||||||||||||| || || ||| ||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 82 gt--agtttcattaacatcaatatgaatgtgggaaataatagaatgactt 129
|| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 79.8 bits (40), Expect = 1e-14
Identities = 92/110 (83%), Gaps = 7/110 (6%)
Strand = Plus / Plus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatgaaact-------taaatag 79
|||||||| ||| |||||||||||| ||||||||||||||||| || || ||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 80 atgtagtttcattaacatcaatatgaatgtgggaaataatagaatgactt 129
|| ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||
Sbjct: 140 atactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||| ||||||||| ||| ||||| || ||||||||||||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 64 aatgaa 69
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||
Sbjct: 59 ttcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagg 118
Query: 147 aagtag 152
|||||
Sbjct: 119 gagtag 124
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| |||||| ||||| ||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 63 atgaa 59
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtattt 43
||||| ||||||||||||||| ||||||||| ||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 83.8 bits (42), Expect = 6e-16
Identities = 124/149 (83%), Gaps = 3/149 (2%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 65 atgaaacttaaatagat--gtagtttcattaacatcaatatgaatgtgggaaataataga 122
||| | ||| |||||| || | | |||||||||||||| ||| |||| ||||
Sbjct: 65 atg-agtttagatagatacatatgtctagatacatcaatatgaatatggaaaatgctaga 123
Query: 123 atgacttatattgtgaaacggaggaagta 151
|||||||| ||||||||||||||||||||
Sbjct: 124 atgacttacattgtgaaacggaggaagta 152
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 88 tcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagga 147
||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 148 agtag 152
|||||
Sbjct: 8 agtag 4
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 65 at 66
||
Sbjct: 79 at 78
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
|||||||||||||| | ||||| |||| |||||||||||| ||||||||||||||| ||
Sbjct: 78 attaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggag 137
Query: 150 tag 152
|||
Sbjct: 138 tag 140
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 95 tatacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgt 36
Query: 63 taatga 68
|||||
Sbjct: 35 aaatga 30
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 88 tcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagga 147
||||| |||||||||| |||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 148 agta 151
||||
Sbjct: 90 agta 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcatt 34
||||||| ||||||||||||||||||||||||
Sbjct: 3 tatactctctccgtttcacaatataagtcatt 34
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 122 aatgacttatattgtgaaacggag 145
||||||||||||||||||||||||
Sbjct: 34 aatgacttatattgtgaaacggag 11
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||| |||||| ||| ||||||||| || |||| ||||||||||||||||
Sbjct: 145 tatactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttata 55
||||||||||||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||| |||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 13 ccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 105 aatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacgg 143
|||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| ||||| ||| ||| |||| ||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||| | ||||| |||| |||||| ||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcat 33
|||||||||||||||||||| ||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 123 atgacttatattgtgaaacggaggaagtag 152
|||||||| ||||||||||||||| |||||
Sbjct: 98 atgacttacattgtgaaacggagggagtag 127
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
|||| ||||||||||||||| ||||||||| |||||||||||||||| |||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcatt 34
|||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 122 aatgacttatattgtgaaacggaggaagta 151
||||||||| ||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
||||||| ||||||||||||||| ||||||||| ||| |||||||||||| |||||
Sbjct: 133 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||| ||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||| ||||||||||||||| ||||| ||| ||| ||||| |||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 101 tatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtaga 153
|||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtaga 97
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||| ||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 49
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 89 cattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaa 148
||||||||| ||||| |||||| ||||| |||||||||||| |||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 149 gtaga 153
|||||
Sbjct: 7 gtaga 3
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| ||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 65 atg 67
|||
Sbjct: 65 atg 67
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| |||| ||||| |||||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| |||||| || ||||||| |||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| |||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataataga-atgacttatattgtgaaacggag 145
|||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||
Sbjct: 70 ttcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaaacggag 11
Query: 146 gaagta 151
| ||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||| ||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| ||| |||| ||||||| |||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 64 aatgaaacttaa---atagatg----tagtttcattaacatcaatatgaatgtgggaaat 116
|||||| | || ||| ||| ||| ||||||| |||| |||||||| | | ||||
Sbjct: 99 aatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaat 40
Query: 117 aatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| |||||||||||| |||| |||||||||||| |||||||||||||||
Sbjct: 94 ttcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||| ||||| ||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||| | ||| |||| || ||||||||| |||||||||||||||
Sbjct: 66 ttcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggagg 125
Query: 147 aagta 151
|||||
Sbjct: 126 aagta 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||| ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 65 atgaa 69
|||||
Sbjct: 70 atgaa 66
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||| ||||||||||||| || ||||||||| ||||| ||||||||| ||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 94 ttcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 153
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 8 tccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatg 67
||||||||||||||||| ||||||||| ||| ||||| |||||| |||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 68 aa 69
||
Sbjct: 95 aa 94
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 92 taacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||||||||| ||| ||| |||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 94 tagaatgacttacattgtgaaacggaggaagta 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttc 44
|||||| ||||||||||||||| ||||||||| ||| |||||
Sbjct: 128 tatacttcctccgtttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 93 aacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgt 62
Query: 63 ta 64
||
Sbjct: 63 ta 64
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 92 taacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||||| |||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
|||| ||||||||||||||| ||||||||| ||| |||| ||| ||| |||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/157 (80%), Gaps = 7/157 (4%)
Strand = Plus / Minus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||||| |||| | || ||| ||| ||||||| |||| ||||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatg 102
Query: 62 ttaatgaaacttaa-------atagatgtagtttcattaacatcaatatgaatgtgggaa 114
|||||||| || | ||| || ||| |||||||||||| |||||||| |||| |
Sbjct: 101 ttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca 42
Query: 115 ataatagaatgacttatattgtgaaacggaggaagta 151
||| ||||| | |||||||| ||||||||||| ||||
Sbjct: 41 atactagaaagtcttatattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| |||||||| | || ||||||| |||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattga 59
|||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 97 tcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||| || ||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||||||||||||||||| |||||||
Sbjct: 72 tagaatgacttatattgtgaaacggaagaagtag 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tccgtttcacaatataagtcatt 34
|||||||||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcatt 75
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||||||| |||| |||| ||||||| || ||||||||||||
Sbjct: 66 ttcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagg 125
Query: 147 aagtaga 153
||||||
Sbjct: 126 gagtaga 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||||||| || ||||||| | || |||| ||||||| ||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 65 atgaa 69
|||||
Sbjct: 70 atgaa 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaat 24
||||||||||||||||||||||
Sbjct: 3 tatactccctccgtttcacaat 24
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 101 tatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||| ||||| |||||||||||| ||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||||||||||||||||||||
Sbjct: 107 tagaatgacttatattgtgaaacggaggaagtag 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
||||| ||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagtattttccacatt 51
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttc 44
|||| ||||||||||||||||||||||||| ||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttc 100
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| ||| ||||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 65 atgaaacttaa-atagatgt------agtttcattaacatcaatatgaatgtgggaaata 117
||||| | | |||||||| || |||||||||||| |||||||||| || |||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| ||| || ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||| ||||||| ||| |||||||||||| ||| |||||||||||
Sbjct: 94 ttcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggagg 153
Query: 147 aagta 151
|||||
Sbjct: 154 aagta 158
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/157 (80%), Gaps = 7/157 (4%)
Strand = Plus / Plus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||||| |||| | || ||| ||| ||||||| |||| ||||
Sbjct: 2 ttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatg 61
Query: 62 ttaatgaaacttaa-------atagatgtagtttcattaacatcaatatgaatgtgggaa 114
|||||||| || | ||| || ||| |||||||||||| |||||||| |||| |
Sbjct: 62 ttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca 121
Query: 115 ataatagaatgacttatattgtgaaacggaggaagta 151
||| ||||| | |||||||| ||||||||||| ||||
Sbjct: 122 atactagaaagtcttatattatgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| |||||||| | || ||||||| |||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 65 atgaa 69
|||||
Sbjct: 98 atgaa 94
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||| ||||||||| ||| |||| ||| |||||||||||||
Sbjct: 133 tatacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgt 74
Query: 63 taatgaa 69
|||||||
Sbjct: 73 taatgaa 67
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||| || ||| |||| |||||||||||| |||||||||||||||
Sbjct: 67 ttcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggagg 126
Query: 147 aagta 151
|||||
Sbjct: 127 aagta 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtattt 43
|||||||||||||||||||| ||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 122 aatgacttatattgtgaaacggaggaagta 151
||||||||| ||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||| ||||| || ||||||||| ||||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtag 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 97 tcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||| ||||| |||||||||||| ||| ||||| ||||| ||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||| ||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
|||| ||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| |||||||||||| || ||||| |||||||||||| ||| |||||||||||
Sbjct: 62 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 121
Query: 147 aagtag 152
|||||
Sbjct: 122 gagtag 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| ||||| || ||| |||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 65 atgaa 69
|||||
Sbjct: 66 atgaa 62
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
|||||||||||||||||||| ||||||||| ||| ||||||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccaca 49
|||||||||||||| ||||| ||| ||||| ||| ||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/156 (80%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| ||| || | ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 65 atgaaacttaa-------atagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || | ||| || ||| |||||||||||| ||||||||||| | | |
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtaga 153
|||||||||||| ||| ||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtaga 3
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||||| | || ||| |||||||||||| ||| |||||||||||
Sbjct: 94 ttcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggagg 153
Query: 147 aagtag 152
|||||
Sbjct: 154 gagtag 159
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/156 (80%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| ||| || | ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 65 atgaaacttaa-------atagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || | ||| || ||| |||||||||||| ||||||||||| | | |
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 118 atagaatgacttatattgtgaaacggaggaagtaga 153
|||||||||||| ||| ||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagtaga 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||||| | || ||| |||||||||||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggagg 10
Query: 147 aagtag 152
|||||
Sbjct: 9 gagtag 4
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
|||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaag 134
Query: 150 ta 151
||
Sbjct: 135 ta 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 103 tgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||| |||||||| ||| |||||||| ||| |||||||||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 64 aat 66
|||
Sbjct: 77 aat 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||| ||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacatt 51
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||| |||| |||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 74 ttcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 133
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 8 tccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 8 tccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatg 67
||||||||||||||||| ||||||||| ||| ||||| |||||| ||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 68 aa 69
||
Sbjct: 75 aa 74
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| |||||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| |||||| || ||| ||| |||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| |||||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| |||||| || ||| ||| |||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 125/155 (80%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| ||| |||||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 65 atgaaacttaa-------atagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| || || || || ||| |||||||||||| ||||| || |||| ||
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| ||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| ||||||||||||| ||| || ||||||||| ||| |||||||||||
Sbjct: 94 ttcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 73.8 bits (37), Expect = 6e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||
Sbjct: 68 ttcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 65 atgaa 69
|||||
Sbjct: 64 atgaa 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||||||||||||
Sbjct: 80 tagaatgacttacattgtgaaacggagg 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 ccctccgtttcacaatataagtcattgtagtattt 43
|||||||||||||||| ||||||||| ||| ||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| | || ||||||| |||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 65 atgaa 69
|||||
Sbjct: 98 atgaa 94
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| |||| ||||| | |||| |||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||||||||||| ||| |||| ||||||||||||| |||||||||||||||
Sbjct: 67 ttcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagg 126
Query: 147 aagta 151
||||
Sbjct: 127 gagta 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| ||||||||| || |||| ||| || ||||||||| |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 64 aatgaa 69
||||||
Sbjct: 72 aatgaa 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 tccctccgtttcacaatataagtcatt 34
|||||||||||||||||||||||||||
Sbjct: 8 tccctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| || ||||| |||||||||||| ||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| ||| ||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 101 tatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||| ||||||||| ||||| ||||||||| ||| ||||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacatt 99
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||| ||||||||| ||| |||| ||||| |||||| |||||||||||||||
Sbjct: 70 ttcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacggagg 129
Query: 147 aagta 151
|||||
Sbjct: 130 aagta 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| |||| ||||||||||||| ||| ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| |||||| || ||| |||| ||| ||| ||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 65 atgaa 69
|||||
Sbjct: 74 atgaa 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||||| ||| ||||||||| || |||| ||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 88 tcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagga 147
|||||||||||||||||||||||| || | || ||||||||| ||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 148 agta 151
||||
Sbjct: 8 agta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||||||||||| | |||||||||||| |||||||||| |||| |||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||| ||| ||||||||| ||| | || ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 65 atga 68
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||| |
Sbjct: 110 tatacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatat 51
Query: 63 taat 66
||||
Sbjct: 50 taat 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||| |||||||| |||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 150 ta 151
||
Sbjct: 107 ta 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcatt 34
|||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| ||||||||||||| || |||| || |||||||||||||||||||||||||
Sbjct: 68 ttcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacggagg 127
Query: 147 aagt 150
||||
Sbjct: 128 aagt 131
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatgaa 69
||||||||||||||||||||||||| ||| |||| || ||| ||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||| ||||||| |||||||||||| |||||||||| ||| |||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| ||||||| ||| ||||| | ||||||||||||||||||||
Sbjct: 72 ttcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagg 131
Query: 147 aagtagaa 154
|||||||
Sbjct: 132 gagtagaa 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||||||||||||||| | || ||| ||| ||||||| |||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 65 atgaa 69
|||||
Sbjct: 76 atgaa 72
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 127 cttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||
Sbjct: 29 cttatattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataag 29
||||| ||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatataag 29
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| ||||||| ||| ||||| | ||||||||||||||||||||
Sbjct: 69 ttcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagg 10
Query: 147 aagtagaa 154
|||||||
Sbjct: 9 gagtagaa 2
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||||||||||||||| | || ||| ||| ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 127 cttatattgtgaaacggaggaagta 151
|||||||||||||||||||||||||
Sbjct: 112 cttatattgtgaaacggaggaagta 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataag 29
||||| ||||||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataag 112
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 71.9 bits (36), Expect = 2e-12
Identities = 91/110 (82%), Gaps = 7/110 (6%)
Strand = Plus / Minus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatgaaact-------taaatag 79
|||||||| ||| |||||||||||| ||||||||||||||||| || || ||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 80 atgtagtttcattaacatcaatatgaatgtgggaaataatagaatgactt 129
|| ||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 71.9 bits (36), Expect = 2e-12
Identities = 91/110 (82%), Gaps = 7/110 (6%)
Strand = Plus / Plus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatgaaact-------taaatag 79
|||||||| ||| ||||| |||||| ||||||||||||||||| || || |||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 80 atgtagtttcattaacatcaatatgaatgtgggaaataatagaatgactt 129
| ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 92 taacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 80 atgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaa 139
|||||| |||||||| |||||||| || || ||||| |||||||||||||||||||||
Sbjct: 76 atgtagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaa 17
Query: 140 acggagg 146
|||||||
Sbjct: 16 acggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 8 tccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatg 67
||||||||||||||||||||||||||| ||| ||||| || || |||||||| ||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 68 aa 69
||
Sbjct: 68 aa 69
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||||||||||||| ||| |||| |||||| || |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| |||||||| ||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 65 atgaaact---taaatagatgt----agtttcattaacatcaatatgaatgtgggaaata 117
||||| || |||||| || | || |||||| |||| |||||||||||| ||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/156 (80%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||| ||| ||||||||| ||| |||| ||||||| |||| ||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgc 62
Query: 63 taatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaa 115
|||||| || || || || ||| ||||||| |||| ||||| ||||| |||
Sbjct: 63 caatgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaa 122
Query: 116 taatagaatgacttatattgtgaaacggaggaagta 151
|| |||||||||||| ||| ||||||||||| ||||
Sbjct: 123 tactagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||||||| ||||||||||||| ||| ||||| | |||| ||||||||||||||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaag 132
Query: 150 tag 152
|||
Sbjct: 133 tag 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| |||| | || ||| ||| |||||||| |||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 65 at 66
||
Sbjct: 74 at 73
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacat 50
|||||||||||||||||||| ||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 106 atgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcatt 34
||||||||||||||||||||| ||| |||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcatt 66
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/156 (80%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||| ||| ||||||||| ||| |||| ||||||| |||| ||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgc 62
Query: 63 taatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaa 115
|||||| || || || || ||| ||||||| |||||||||| ||||| ||
Sbjct: 63 caatgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaa 122
Query: 116 taatagaatgacttatattgtgaaacggaggaagta 151
|| |||||||||||| ||| ||||||||||| ||||
Sbjct: 123 tagtagaatgacttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||| |||||||||||| |||| |||||||||||| ||| ||||||||||| ||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||||||| |||| |||||| ||||| ||||||||||||||| |||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
||||||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||| |||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 4e-11
Identities = 126/158 (79%), Gaps = 9/158 (5%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||||| | |||||| | || ||| ||| |||||||| |||| |||||
Sbjct: 162 tatactccctccgtttcatattataagactttctagcattgcccacattcatatagatgt 103
Query: 63 taatgaaacttaa---------atagatgtagtttcattaacatcaatatgaatgtggga 113
||||||| || | ||| || ||| |||||||||||| |||||||||||||
Sbjct: 102 taatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggc 43
Query: 114 aataatagaatgacttatattgtgaaacggaggaagta 151
||| ||||| | |||||| | ||||||||||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 96 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagg 155
Query: 147 aagta 151
||||
Sbjct: 156 gagta 160
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||| ||||| ||||||||||||| ||| |||| ||| |||||||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacat 50
||||||||||||||||| ||| ||||||||| |||||||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 106 atgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||| ||||| |||||||||||| ||| ||||||||||| ||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||| ||| ||| |||| |||||||||||||||| ||||| ||||| ||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||| ||| ||| ||||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
|||| ||||||||||||||| ||||| ||||||| |||||||||||| |||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 99 aatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||||| || ||| ||||| ||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatatt 57
|||| ||||||||||||||| ||||| |||||| ||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||| | ||| |||||||||||| ||| ||||| |||||
Sbjct: 68 ttcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatggagg 127
Query: 147 aagta 151
|||||
Sbjct: 128 aagta 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||| ||||| ||| ||||||||| ||| ||| | |||||| |||| |||||
Sbjct: 134 tatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgt 75
Query: 63 taatgaa 69
|||||||
Sbjct: 74 taatgaa 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcatt 34
|||||||||||||||||| ||| |||||||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcatt 34
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 73/84 (86%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 40 atttcccacatttatattgatgttaatgaaacttaaatagatgt--agtttcattaacat 97
|||||||||||| |||||||||| |||||| || | | |||||| || |||||| ||||
Sbjct: 83 atttcccacattcatattgatgtcaatgaatct-agacagatgtctagattcattgacat 25
Query: 98 caatatgaatgtgggaaataatag 121
||||||||||||||||||| ||||
Sbjct: 24 caatatgaatgtgggaaatgatag 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaat 116
|||||| |||||||||||||||||||||||
Sbjct: 54 ttcattgacatcaatatgaatgtgggaaat 83
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||| ||| |||| | || ||| ||| |||||||| |||| |||
Sbjct: 1 attatactccctccgtttcataatgtaagactttctagcattgcccacattcatatagat 60
Query: 61 gttaatgaa 69
|||||||||
Sbjct: 61 gttaatgaa 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||| ||| |||| | || ||| ||| |||||||| |||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||| ||||||||||||| ||| ||||| | |||| ||| ||||||||||| ||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
||||||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||||||| |||| |||||| ||||| ||||||||||||||| |||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 96 atcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||| |||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/109 (82%), Gaps = 5/109 (4%)
Strand = Plus / Minus
Query: 22 aatataagtcattgtagtatttcccacatttatattgatgttaatgaaacttaaatagat 81
||||||||||||| ||| ||||| |||||| ||||||||| ||||||| || |||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatct-----agac 54
Query: 82 gtagtttcattaacatcaatatgaatgtgggaaataatagaatgactta 130
|| ||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 53 atatattcattagcatcaatatgaatgtgagaaatgctagaatgactta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/109 (82%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 26 taagtcattgtagtatttcccacatttatattgatgttaatgaaacttaaatagatgtag 85
||||||||| ||| ||||| |||||| ||||||||| ||||||| ||| | |||
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaat-----atatgtctag 59
Query: 86 tttcattaacatcaatatgaatgtgggaaataatagaatgacttatatt 134
||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 60 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatatt 108
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| | || ||||||| |||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 65 atgaa 69
|||||
Sbjct: 98 atgaa 94
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||||| |||| |||| ||||| | |||| |||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||| ||||||||||||| ||| |||| |||| |||||| ||||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcattttccacctttataaggatgtt 63
Query: 64 a 64
|
Sbjct: 64 a 64
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||||||| ||||||||||| ||||
Sbjct: 37 tagaatgacttatattatgaaacggagggagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 89 cattaacatcaatatgaatgtgggaaataatagaatgactt 129
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 89 cattaacatcaatatgaatgtgggaaataatagaatgactt 129
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatg 67
|||||||| ||| |||||||||||| |||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatg 41
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatg 67
|||||||| ||| |||||||||||| |||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatg 83
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 124/155 (80%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||||||| |||| | || ||||||| ||||| | |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 64 aatgaa-------acttaaatagatgtagtttcattaacatcaatatgaatgtgggaaat 116
|||||| || || ||| | ||| |||||||||||| | |||||| |||| |||
Sbjct: 99 aatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaat 40
Query: 117 aatagaatgacttatattgtgaaacggaggaagta 151
||||| | |||| ||||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| | ||||| |||| ||||| | |||| |||||||||||||||
Sbjct: 94 ttcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||||||||| ||||||||| ||| |||| ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 65 atgaa 69
|||||
Sbjct: 70 atgaa 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||| | ||| |||| |||||||||||| |||||||||||||||
Sbjct: 66 ttcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggagg 125
Query: 147 aagta 151
|||||
Sbjct: 126 aagta 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||| |||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||| ||||| ||||||||| ||||||||| |||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||| ||| |||||||||||
Sbjct: 94 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagg 153
Query: 147 aagta 151
|||||
Sbjct: 154 aagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||| ||||||||||| ||| |||| | || ||| ||| |||||||| |||| ||||
Sbjct: 161 ttatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 102
Query: 62 ttaatgaa 69
||||||||
Sbjct: 101 ttaatgaa 94
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 62 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagg 121
Query: 147 aagta 151
|||||
Sbjct: 122 aagta 126
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||| | |||||| | || ||| ||| |||||||| |||| |||||
Sbjct: 128 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 69
Query: 63 taatgaa 69
|||||||
Sbjct: 68 taatgaa 62
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||| ||||||||||| ||| |||| | || ||| ||| |||||||| |||| ||||
Sbjct: 2 ttatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 61
Query: 62 ttaatgaa 69
||||||||
Sbjct: 62 ttaatgaa 69
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||||||||||||||| ||| ||||||||| ||| ||||||||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacatctatat 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||| |||||| ||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 106 atgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||||| |||||||||||| ||| ||||||||||| |||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagtag 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
|||| ||| ||||||| ||||||||||||| || ||||| |||||||||||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatat 56
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 6 actccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaa 65
||||||||||||||| ||| ||||||||| ||| |||||||||||| |||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 66 tgaa 69
||||
Sbjct: 97 tgaa 94
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||| |||| || ||||||||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 94 ttcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 121/150 (80%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||||||||||||||| | || ||| | | ||||||| ||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 65 atgaaacttaa---atagatgtagtttcattaacatcaatatgaatgtgggaaataatag 121
||||| || || ||| | ||| |||||||||||| | ||||||||||| || ||
Sbjct: 94 atgaatctaaatacatatgtctagattcattaacatctaaatgaatgtgggcaacgctac 35
Query: 122 aatgacttatattgtgaaacggaggaagta 151
|| | |||| ||||||||||||||||||||
Sbjct: 34 aaagtcttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 122/153 (79%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||| ||||||||||||||| |||| | |||||| || |||||||| || | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 64 aatgaaact---taaatagatgtagtttcattaacatcaatatgaatgtgggaaataata 120
|||||| || | || || ||| |||||||||||| |||| ||||||| | | ||
Sbjct: 64 aatgaatctagacatatgtatttagattcattaacatctttatgtatgtgggtagtgcta 123
Query: 121 gaatgacttatattgtgaaacggaggaagtaga 153
|| | |||||||||||||||||||| ||||||
Sbjct: 124 aaaagtcttatattgtgaaacggagggagtaga 156
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| | ||||||||||||||||||||||| ||| |||| || ||||| ||| ||||
Sbjct: 3 tatacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgt 62
Query: 63 taatgaa 69
|||||||
Sbjct: 63 taatgaa 69
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||| |||| || |||||||||||||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 122 aatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||||||| ||||||
Sbjct: 34 aatgacttatattgtgaaacggaagaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 9 ccctccgtttcacaatataagtcatt 34
||||||||||||||||||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcatt 101
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||||||||||||||||||| ||||||||| ||| |||| |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 105 aatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||| |||| |||||||||||| ||||||||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtattt 43
|||||||||||||||||||| |||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagtag 152
||||||||||| ||||||||||||||| |||||
Sbjct: 37 tagaatgacttgcattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtattt 43
|||||||| ||||||||||||||||||||| ||||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 113 aaataatagaatgacttatattgtgaaacggaggaagta 151
||||| |||||||||||||||||||||||| ||| ||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
||||||||||||||||||||| ||| ||||| ||| |||| || |||| |||||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||||||||||||||||||| ||||||||| ||| ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcatt 51
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatat 56
||||| ||||||||||||||| ||||||||| ||| |||| ||||| ||||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccacaattatat 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 76 tagaatgacttacattgtgaaacggaggaagta 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 102 atgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||| ||||||| || ||||||||| ||||||||||||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgactt 129
||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 43 ttcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatga 126
||||||| |||||||||||||||||||||| ||||||||
Sbjct: 48 ttcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 27 aagtcattgtagtatttcccacatttatattgatgttaatgaa 69
|||||||| ||| |||||||||||| ||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaa 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 30 tcattgtagtatttcccacatttatattgatgttaatgaa 69
||||| ||| |||||||||||| ||||||||| |||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaa 48
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 125/157 (79%), Gaps = 7/157 (4%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| | || ||| ||| ||| |||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 65 atgaa-------acttaaatagatgtagtttcattaacatcaatatgaatgtgggaaata 117
||||| ||||| || | ||| ||||||| |||| || |||||||||| |||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 118 atagaatgacttatattgtgaaacggaggaagtagaa 154
||||| | |||| ||| |||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtagaa 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||| ||| ||| ||||| | |||| |||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||| ||||| ||||||| ||| ||||| | |||| |||||||||||||||
Sbjct: 69 ttcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagg 10
Query: 147 aagtag 152
||||||
Sbjct: 9 aagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataag 29
||||||||||||||||||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaag 134
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||||| || | ||| ||||| |||||||||| |||||| ||||
Sbjct: 69 ttcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaacagagg 10
Query: 147 aagtag 152
||||||
Sbjct: 9 aagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| |||||||| |||| ||| ||||| | |||||||| |||||||||||
Sbjct: 76 ttcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacggagg 135
Query: 147 aagta 151
||||
Sbjct: 136 gagta 140
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||| ||| ||||| ||| ||| ||| ||||||| |||| |||
Sbjct: 141 attatactccctccgtttcataatgtaagttattctagcattgtccacattcatatagat 82
Query: 61 gttaat 66
||||||
Sbjct: 81 gttaat 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 103 tgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
|||||||||| ||| |||||| ||||| ||| |||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||||||| |||||||||||| ||| |||||| ||||| ||| ||||||||||| ||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttacattatgaaacggagggag 135
Query: 150 ta 151
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 83 tagtttcattaacatcaatatgaatgtgggaaat 116
||||||||||| ||||||||||||||||||||||
Sbjct: 39 tagtttcattagcatcaatatgaatgtgggaaat 6
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 atttcccacatttatattgatgttaatgaaact 72
|||||||||||| ||||||||| ||||||||||
Sbjct: 6 atttcccacattcatattgatgctaatgaaact 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaat 116
|||| ||||||||||||||||||||||
Sbjct: 85 attagcatcaatatgaatgtgggaaat 111
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||||||| | ||||||||| | |||| ||||| | |||||||||||||||||||| ||
Sbjct: 63 attaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacggagggag 122
Query: 150 ta 151
||
Sbjct: 123 ta 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||||||||||||||||||| | || || |||| | |||||| || | |||||||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 65 at 66
||
Sbjct: 64 at 63
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| ||||||||||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 94 ttcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagg 153
Query: 147 aagtag 152
||||||
Sbjct: 154 aagtag 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||| |||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 8 tccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatg 67
||||||||||||||||| |||| | || ||||||| |||||||||| | ||||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 68 aa 69
||
Sbjct: 55 aa 54
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | || ||||||| |||| ||||| | |||| |||||||||||||||
Sbjct: 54 ttcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacggagg 113
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagtag 152
|||||||||||| |||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||| ||||||||||||||| ||||||||| ||| | || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacatt 51
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 106 atgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||| |||||||||||| |||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacat 50
|||||| |||||||| |||||| ||||||||| ||| |||||||||||
Sbjct: 3 tatacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcatt 34
|||||||||||||||||||| |||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcatt 65
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||| ||||
Sbjct: 62 tagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||| ||| ||||||||| ||| ||||| || ||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 64 aatgaa 69
| ||||
Sbjct: 64 agtgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||| ||||||| |||| ||| || ||||| |||||||||||| ||| |||||||||||
Sbjct: 69 ttcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtattt 43
||||||||| |||||| ||| ||||||||||||| ||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcattt 120
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| ||| ||||| || |||| |||| |||||||||||| ||| |||||||||||
Sbjct: 69 ttcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaacggagg 10
Query: 147 aagtag 152
|||||
Sbjct: 9 gagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| ||||||||| || |||| |||| || |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||| ||||||||||||||||
Sbjct: 104 tagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||| ||||||||||| ||||| |||||||||||| ||| ||||||||||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||| ||| ||||||||| || ||||| |||||| |||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||| ||||||| ||| |||||||| |||| |||||||||||| ||| | |||||||||
Sbjct: 74 ttcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacggagg 133
Query: 147 aagta 151
||||
Sbjct: 134 gagta 138
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||| ||||
Sbjct: 68 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgagg 127
Query: 147 aagta 151
|||||
Sbjct: 128 aagta 132
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 1 attatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgat 60
|||||||||||||||||||| ||| ||| | || ||| ||| |||||||| |||| |||
Sbjct: 146 attatactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagat 87
Query: 61 gttaatgaa 69
|||||||||
Sbjct: 86 gttaatgaa 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 94 acatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||| ||||||||||||| ||| ||||| | |||| ||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||||||||||||| ||| |||| | || ||| ||| |||||||| |||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtggg 112
|||||||||||| |||||||||||||
Sbjct: 78 ttcattaacatctatatgaatgtggg 103
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| ||||| | ||| ||||| | |||| |||||||||||||||
Sbjct: 94 ttcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggagg 153
Query: 147 aagta 151
|||||
Sbjct: 154 aagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | |||||||| || |||| || || | |||| ||||| |||||||||
Sbjct: 69 ttcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgtaaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| ||||||||||||| ||| |||||| | |||||| | |||||||||||
Sbjct: 74 ttcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagg 133
Query: 147 aagta 151
||||
Sbjct: 134 gagta 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
||||||||||||||||| | |||||| | || || ||| |||||||| |||| |||| |
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
Query: 64 aatgaa 69
||||||
Sbjct: 79 aatgaa 74
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatataagtcattgtagtatttcccacatttata 55
|||||||||||||| ||||||||| ||| |||||| |||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 105 aatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||| |||||| |||||||||||| |||||||||||||| |||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcattgtagtat 41
||||| ||||||||||||||| ||||||||| ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagtat 41
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 91 ttaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagt 150
|||||||| ||||||||||||| ||| ||||| | |||||| | |||||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagt 6
Query: 151 a 151
|
Sbjct: 5 a 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||| | |||||| | || ||| ||| |||||||| |||| |||||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Query: 63 taa 65
|||
Sbjct: 63 taa 65
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | |||||||||| ||| ||||| | |||| |||||||||||||||
Sbjct: 69 ttcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgt 62
|||||| ||||||||||||||| |||| | || ||| ||| ||||||| || | |||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgt 62
Query: 63 taatgaa 69
|||||||
Sbjct: 63 taatgaa 69
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||| ||||
Sbjct: 68 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgagg 127
Query: 147 aagta 151
|||||
Sbjct: 128 aagta 132
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||| | | ||||||||||| ||| ||||| | |||| |||||||||||||||
Sbjct: 69 ttcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| ||||||||||||| ||| ||||| | |||| |||||||||||||||
Sbjct: 94 ttcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagg 153
Query: 147 aagta 151
||||
Sbjct: 154 gagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||||| |||| | || || ||| |||||||| |||| ||||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatg 102
Query: 62 ttaatgaa 69
|||||||
Sbjct: 101 ctaatgaa 94
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||||| ||||||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 91 tactccatccgtttcataatataagtcattttagcatttctcacatt 45
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttc 44
|||| ||||||||||||||| ||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||||||||||||||||||||| || |||||||| |||||| |||| ||
Sbjct: 50 ttcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgaggg 109
Query: 147 aagta 151
|||||
Sbjct: 110 aagta 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 14 cgtttcacaatataagtcattgtagtatttcccacatttatattgatgttaatgaa 69
|||| |||||| |||||||| ||| |||||||||||| ||||||||| |||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaa 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatt 51
|||||||||||||||||||| ||| ||||| ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 102 atgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||| ||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| | |||||| | || ||| ||| |||||||| |||| |||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 65 atgaa 69
|||||
Sbjct: 99 atgaa 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 95 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggagg 154
Query: 147 aagta 151
||||
Sbjct: 155 gagta 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 91 ttaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagt 150
|||||||| ||||||||||||| ||| ||||| | |||||| | ||||||||||| |||
Sbjct: 65 ttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagt 6
Query: 151 a 151
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| |||| | || ||| ||| |||||||| |||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 65 atgaa 69
|||||
Sbjct: 80 atgaa 76
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||| ||| |||||||||||
Sbjct: 76 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagg 135
Query: 147 aagta 151
||||
Sbjct: 136 gagta 140
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
||||||||||||||||||||||||||| |||||
Sbjct: 57 tagaatgacttatattgtgaaacggagtaagta 89
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagta 151
|||||||||||| | ||||||||||||||||||
Sbjct: 37 tagaatgacttacactgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatataagtcattgtagtattt 43
|||||||||||||||||||||||| ||| ||||
Sbjct: 83 ctccgtttcacaatataagtcattctagcattt 51
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2 ttatactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatg 61
||||||||||||||||||||||| |||| || ||| ||| ||||||| || || ||||
Sbjct: 2 ttatactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatg 61
Query: 62 ttaatgaa 69
||||||||
Sbjct: 62 ttaatgaa 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 102 atgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
||||||||| | ||| ||||| | ||||||||||| ||||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagtag 139
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
||||||||||||| |||| ||||| | |||||| | ||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 68 ttcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaacggagg 127
Query: 147 aagtag 152
|||||
Sbjct: 128 gagtag 133
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| | |||||| | || ||| ||| |||||||| |||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 65 atgaa 69
|||||
Sbjct: 72 atgaa 68
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataag 29
|||||||||||||||||||||||||||
Sbjct: 3 tatactccctccgtttcacaatataag 29
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||||||| |||||||||||| ||| ||||| | |||| ||||||||||||||| ||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggag 138
Query: 150 tag 152
|||
Sbjct: 139 tag 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| | || ||| ||| ||||||| |||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 65 at 66
||
Sbjct: 80 at 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 tatactccctccgtttcacaatataag 29
|||||||||||||||||||||| ||||
Sbjct: 3 tatactccctccgtttcacaatgtaag 29
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 119 tagaatgacttatattgtgaaacggaggaagtaga 153
|||||||||||| ||| ||||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggaggaagtaga 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 4 atactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtt 63
|||||||||| |||||| ||| ||| ||||| ||| ||| ||||||| |||| ||||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 64 aatgaa 69
||||||
Sbjct: 73 aatgaa 68
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| ||||||| ||| |||||||| ||| ||| |||||| ||||
Sbjct: 68 ttcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaacagagg 127
Query: 147 aagta 151
||||
Sbjct: 128 gagta 132
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 122 aatgacttatattgtgaaacggaggaagta 151
||||||||| ||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||| ||||||||| ||| ||||| ||| |||| || |||||||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 65 atgaa 69
|||||
Sbjct: 46 atgaa 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagtcatt 34
||||| ||||||||||||||| |||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| |||| |||||||| |||| ||| ||||| | |||||| | |||||||||||
Sbjct: 50 ttcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggagg 109
Query: 147 aagtag 152
||||||
Sbjct: 110 aagtag 115
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||| |||||||||||| ||| ||||| | |||| ||| |||||||||||
Sbjct: 92 ttcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacggagg 151
Query: 147 aagtag 152
||||||
Sbjct: 152 aagtag 157
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||||||||||||||||| | || ||| ||||| | |||| ||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||| ||| |||| | || ||| ||| || | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||| ||||||| ||| ||||| | |||||||||| |||||||||
Sbjct: 70 ttcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggagg 129
Query: 147 aagtag 152
|||||
Sbjct: 130 tagtag 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||| ||||||||| |||||||||| | || || ||| ||||||| ||||| |||||||
Sbjct: 134 tactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtta 75
Query: 65 atgaa 69
|||||
Sbjct: 74 atgaa 70
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | |||||| |||| ||| || || | |||| |||||||||||||||
Sbjct: 94 ttcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacggagg 153
Query: 147 aagtag 152
||||||
Sbjct: 154 aagtag 159
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | |||||||| | ||| ||||| | |||| |||||||||||||||
Sbjct: 69 ttcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacggagg 10
Query: 147 aagtag 152
||||||
Sbjct: 9 aagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| ||||||| ||| ||||| | |||| ||| |||||||||||
Sbjct: 83 ttcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacggagg 142
Query: 147 aagta 151
||||
Sbjct: 143 gagta 147
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||| | ||| ||| | | |||| |||||||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggagg 10
Query: 147 aagtag 152
|||||
Sbjct: 9 gagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| || |||||||||| ||| || || | |||| |||||||||||||||
Sbjct: 94 ttcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagg 153
Query: 147 aagtag 152
|||||
Sbjct: 154 gagtag 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| | | ||| ||| | |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
|||||||||||||||||||| |||| | || || ||| |||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 65 atgaa 69
|||||
Sbjct: 98 atgaa 94
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
||||||| ||| ||||||||||||| ||| ||||| | |||| ||||||||||||| |
Sbjct: 62 ttcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggatg 121
Query: 147 aagta 151
|||||
Sbjct: 122 aagta 126
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| || || | ||| || |||| |||| |||||||||||||||
Sbjct: 73 ttcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggagg 132
Query: 147 aagta 151
|||||
Sbjct: 133 aagta 137
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||| |||| ||||||||||||| ||| ||||| | |||||| | |||||||||||
Sbjct: 69 ttcattgacatatatatgaatgtgggcaatgttagaaagtcttataatatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | ||||||||||| ||| ||||| | |||| |||||||||| ||||
Sbjct: 69 ttcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacagagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||||||| |||| | || ||| ||| |||||||| || | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||| ||| ||||||||||||| || ||||| | |||| |||||||||| ||||
Sbjct: 50 ttcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagagg 109
Query: 147 aagta 151
|||||
Sbjct: 110 aagta 114
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||| || || | ||| || |||| |||| |||||||||||||||
Sbjct: 69 ttcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||| ||||||||||||| || ||||| | |||| ||||||||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 95 catcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagtag 152
|||| ||||||||||||| ||| ||||| |||| ||||||||||||||| |||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtag 121
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| |||||||||| | ||| ||||| | |||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||| ||| |||| | || ||| ||| ||||||||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| | |||||| ||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacatttatattgatgtta 64
||||||||| |||||| | |||||| | || ||| ||| |||||||| |||| |||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 65 atgaa 69
|||||
Sbjct: 65 atgaa 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 ttcattaacatcaatatgaatgtggg 112
|||||||||||| |||||||||||||
Sbjct: 96 ttcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | ||||||||||| ||| ||||| | ||| ||| |||||||||||
Sbjct: 69 ttcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 146
|||||||||||| | ||||||| || |||| || || | |||| |||||||||||||||
Sbjct: 69 ttcattaacatctaaatgaatggaggtaatactataaagtcttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 90 attaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaag 149
||||||||| | ||| ||||||| ||| ||||| | |||| ||||||||||||||| ||
Sbjct: 97 attaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggag 156
Query: 150 ta 151
||
Sbjct: 157 ta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 5 tactccctccgtttcacaatataagtcattgtagtatttcccacat 50
|||||||||||||||||||| |||| | || ||| ||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacat 113
>RF00906;MIR1122;AC157502.2/65328-65172 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 atactccctccgtttcacaatataagt 30
||||||||||||||||| |||||||||
Sbjct: 4 atactccctccgtttcaaaatataagt 30
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 93 aacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggaggaagta 151
|||||| |||||||||||| ||| ||||| | |||||| | ||||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
