miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 141/155 (90%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 64 aatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagta 158
Score = 149 bits (75), Expect = 1e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | | ||||||||||||||||||||||||| ||| | |||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||| |||||||||||||||||||||||||||| ||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||| ||||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||| |||||| || ||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
Score = 149 bits (75), Expect = 1e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||| |||||||||||||||||||||| | |||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||||||||||||||||||||||||||||||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||||||| ||||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| || ||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || | | |||||| | ||||||||||||||||| ||||||||||||| ||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 136/157 (86%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| ||||||||| |||||||||||||||||| |||||| |||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || | | |||||| | |||||||||||||||| |||||||||||||||| |
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaa 122
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtat 160
| ||| |||||||||||||||| || ||||| |||||
Sbjct: 123 tactagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 182 bits (92), Expect = 1e-45
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || |||||| ||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 98 aatgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || || ||| || | | ||||||||||||||||||||||||||||||| |||
Sbjct: 65 atgaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 128/142 (90%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| ||||||||| ||||||||| | |||||||||||||| ||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 124 tgctaaaatgacttacattgtg 145
||||| ||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtg 144
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | ||||||||||||||||||||||| ||||||||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
| |||||||||||||||||| || ||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 140/158 (88%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || |||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagtatgt 162
|||| |||||||||||||||| || |||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagtatgt 161
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||||||||||||| |||||||||||||||||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||| ||| |||||||||||| ||||||| | |
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 153 bits (77), Expect = 9e-37
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || | | |||||| | ||||||||||||| ||||||||| ||||||||| |
Sbjct: 63 taatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaa 122
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
| ||||||||||||| |||||| || ||||| ||||
Sbjct: 123 ttctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 140/158 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||| ||| ||||| ||| |||||||||| | ||||||||||||||||||||| | |
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtatgta 163
||| |||||||||||||||| || ||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtatgta 1
Score = 139 bits (70), Expect = 1e-32
Identities = 120/137 (87%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | ||||||||||||| ||||||||||||||||||| |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 126 ctaaaatgacttacatt 142
| |||||||||||||
Sbjct: 125 gtggaatgacttacatt 141
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||| | || |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||| ||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 134/157 (85%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||| | ||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | ||||| | |||| ||||||||||||||||||||||| || | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtatgt 162
||| |||||||||||||||| || ||||| |||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtatgt 161
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 172 bits (87), Expect = 1e-42
Identities = 140/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 158 tgtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgt 99
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||||||||| | |||| |||||||||||||||||||||||| | | |
Sbjct: 98 taatgaatctagacatatata--tgtctacattcattaacatcaatatgaatgtagaaaa 41
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtat 160
||||| ||||||||||||||||||| |||||||||||
Sbjct: 40 tgctagaatgacttacattgtggaacggaggaagtat 4
Score = 167 bits (84), Expect = 6e-41
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| || |||||| |||||||||||||||||| | ||||||||||||| |||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||||||| |||||||||| | |||||||||||||||||||||||||||||||| |||
Sbjct: 65 atgaatgtagacatatatatgt--ctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||||||||| ||||| ||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||| |||||||||||| |||||||||||||||| | |||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 149 bits (75), Expect = 1e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | ||||||||||||||||||| ||||||||||||| |||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| |||||||| ||||||||| | |||||||||||||| ||||||| |||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||| ||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||| ||||| || ||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
Score = 123 bits (62), Expect = 8e-28
Identities = 133/157 (84%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| |||||||| ||||||||| |||||||||||||||| ||||||| ||
Sbjct: 160 tgtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgt 101
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || | | | |||| | ||||||||||| ||||||||||| ||||||||| |
Sbjct: 100 taatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaa 41
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtat 160
||| |||||||||||| ||||| || ||||| |||||
Sbjct: 40 tgcaaaaatgacttactttgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| | | ||||||||||| | |
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||||||||||| ||||||||||||||| |||||||| | |||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtatgt 162
||| |||||||||||||||| || |||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtatgt 2
Score = 109 bits (55), Expect = 1e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||| |||||||| |||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| || | || | | |||||| | ||||||||||||| ||||||||||||| | | | |||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| |||||| || ||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 137/155 (88%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || ||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||| |||| |||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||||||||||||| |||||||||||||||||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||| |||||||||||| ||||||||||||||| | |||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| ||||||||| ||||| ||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 134/156 (85%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| || |||||| |||||||||||||||||| |||||||||||||| |
Sbjct: 160 tgtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatat 101
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || | | |||||| | |||||||||||||||| |||||| ||||||||| |
Sbjct: 100 taatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaa 41
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
||||| |||||||||||||||| || ||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||||||||| |||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||| | ||||||||||||||||| |||||||| |||| |||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| ||||||||||||||||| |||| |||||||| || |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || |||||| | ||||||||||||||||| |||||||||||| || ||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||| | |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||||||||||||||| ||||||||||||||| || |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| |||||| || ||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || | | |||||| | ||||||||||||| ||||||||||||||||| | ||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
| || |||||||||||||||| || ||||| ||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| ||||||||||||| |||||| ||||||| | |
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| |||||| || ||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||| |||||||||||||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | ||||||||||||| ||||||||| |||||| | |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| |||| |||| |||||| || ||||| |||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 163 bits (82), Expect = 9e-40
Identities = 139/158 (87%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 66 aggaatgtanacatatatatctatctagattcattaacatca----atatgaatgtggga 121
| |||| || |||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 122 gatgctaaaatgacttacattgtggaatggaggaagta 159
|||||| |||||||||||||||| || ||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 134/159 (84%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatat----tga 60
||||| ||||| ||||||||| ||||||||||||||||||| || ||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 61 agttgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
||| | |||| || | | |||||| | ||||||||||||||||||| ||||||||||||
Sbjct: 64 tgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggg 123
Query: 121 agatgctaaaatgacttacattgtggaatggaggaagta 159
| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 124 aaatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 137/156 (87%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 160 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatat 101
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || | |||||||| ||||||||||||||||||| ||||||||||||| | |
Sbjct: 100 taatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaa 41
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
| || ||||||||| |||||| || ||||||||||
Sbjct: 40 agttagaatgacttatattgtgaaacggaggaagta 5
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||| | ||| ||||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| |||||||||||||||| |||||||||||||||||| |||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| |||||| || ||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 137/156 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||| || ||| ||| ||||| || ||||||||||||| | |||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtatg 161
||| |||||||||||||||| || ||||| ||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtatg 3
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||| |||||||| ||||||||||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||| || | |||||| | ||||||||||||||||||||||||||||||||| |||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 157 bits (79), Expect = 6e-38
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 28 aagtcattctagcatttcccacattcatattgaagttgaggaatgtanacatatatatct 87
||||||||||||||||||||||||||||||||| ||| | |||| || ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
||||||||||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 125 bits (63), Expect = 2e-28
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 28 aagtcattctagcatttcccacattcatattgaagttgaggaatgtanacatatatatct 87
|||||||||||||||||| |||||||||||||| ||| | |||| || | | |||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||||||| | |||||||||||||||||| ||||||||||| || |||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||| |||| || ||||| ||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 134/156 (85%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||| | ||||||||| || |||||| ||||||||||| || |||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || |||| ||||| ||| ||||||||| |||||| |||||||||||||| ||
Sbjct: 64 aatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagtat 160
|||| |||||||||||||||| || ||||| |||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 157 bits (79), Expect = 6e-38
Identities = 102/110 (92%)
Strand = Plus / Plus
Query: 28 aagtcattctagcatttcccacattcatattgaagttgaggaatgtanacatatatatct 87
||||||||||||||||||||||||||||||||| ||| | |||| || ||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
|| ||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 133 bits (67), Expect = 8e-31
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 28 aagtcattctagcatttcccacattcatattgaagttgaggaatgtanacatatatatct 87
||||||||||||||||||||||||||||||||| ||| | |||| || | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 124/140 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| | | |||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 126 ctaaaatgacttacattgtg 145
|| ||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtg 19
Score = 121 bits (61), Expect = 3e-27
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||| ||| ||||||||| |||||||||||| |||||| |||||||||||||| |||
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || | | |||||| | |||||||||||||| ||||| |||||| | | | ||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagtat 160
|||| |||||||||||||||| || ||||| |||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 151 bits (76), Expect = 4e-36
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||| |||||| |||||||||||||| ||||| || |||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||| || | | |||||| | ||||||||||||||||||||||||||| ||||| |||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||| ||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 135/155 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||| ||||||||| ||||| |||||||| | |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||| |||||||||||||| || | ||||||||||||| |||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| |||||||||||||||| || |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||||||||||||| | | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || || |||||| | ||||||||||||| |||||||||| ||||| || |||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| || ||||| ||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 151 bits (76), Expect = 4e-36
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||||||| |||||| |||||||||||||| ||||| || |||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||| || | | |||||| | ||||||||||||||||||||||||||| ||||| |||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||| ||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 151 bits (76), Expect = 4e-36
Identities = 134/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| | |
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||| |||||||||||| ||||||||||||||||||| |||
Sbjct: 92 atgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 131/156 (83%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || |||| | ||||||||||||| ||||||||||||||| ||| |
Sbjct: 63 taatgaatctag------atatatgtctagattcattagcatcaatatgaatgtaggaaa 116
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
||||| ||||||||| |||||| || ||||| ||||
Sbjct: 117 tgctagaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 127/146 (86%)
Strand = Plus / Plus
Query: 9 tccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttgagg 68
||||||| ||||||||| |||||||||||||||| || ||||||||||||||| | | |
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 69 aatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatgcta 128
||| || ||||| |||| | |||||||||||| ||||||||||||||||| || ||||||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 129 aaatgacttacattgtggaatggagg 154
|||||||||||||||| || |||||
Sbjct: 128 gaatgacttacattgtgaaacggagg 153
Score = 121 bits (61), Expect = 3e-27
Identities = 124/146 (84%)
Strand = Plus / Minus
Query: 9 tccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttgagg 68
||||||| ||||||||| ||||||||||||||||||| |||||||||||||| || | |
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 69 aatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatgcta 128
||| || |||||||| | | |||||||||| | |||||||||||||| || ||||||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 129 aaatgacttacattgtggaatggagg 154
|||||||||||||||| || |||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 145 bits (73), Expect = 2e-34
Identities = 105/116 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||| |||| ||||||||||||||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggga 121
| |||| || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtggga 42
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||| ||||| ||||| ||||||| ||||||||||||||||||| ||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | ||||||||||||||||||||||||||||||| | ||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
|| |||||||||||||||| || ||||| |||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagtat 158
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 125/143 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| |||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||| ||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaa 148
|| ||||||||||||| |||||
Sbjct: 38 ttagaatgacttacattatggaa 16
Score = 109 bits (55), Expect = 1e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||| ||| || || ||| |||||||||||| |||||||||||||||||| | |||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||||||| | |||||||||||||||| | |||||||||||| | |||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 143 bits (72), Expect = 9e-34
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||||||||||||||||| || ||||||| |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| | |||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 96 atgaatctggacatatgc--ctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 133 bits (67), Expect = 8e-31
Identities = 135/157 (85%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||| || | || |||||||||||||||||||| || |||||| |
Sbjct: 63 taatgaatctag--ataggcatatgtccagattcattaacatcaatataaacgtgggaaa 120
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtat 160
||||| ||||||||| |||||| || |||||||||||
Sbjct: 121 tgctagaatgacttatattgtgaaacggaggaagtat 157
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 143 bits (72), Expect = 9e-34
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||| ||||||||| ||| ||||| | |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||||| ||||||||||||||||| |||||||||||||||| || |||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| |||||||||||||| | || |||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagtat 4
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| |||| |||| ||||||||||||||||||| |||||||||||||| | |
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | | |||| ||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| |||||||||||||||| || ||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 141 bits (71), Expect = 3e-33
Identities = 132/154 (85%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | ||||||||||||||||||||||||||||||||| |||
Sbjct: 89 atgaatctagaa---------tgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 132/154 (85%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || || ||||||| | |||||||||||| |||| |||||||||||| |||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||| ||||||||| || ||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| || |||||||||||||| |||||||||||| || | |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || ||||||||| ||||||||||||||||||||||||||||||| | ||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 96/106 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| |||||||| |||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatat 111
| |||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatat 53
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||| |||| | | ||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||||||||||||| |||||||||||||||||| ||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| |||| ||||||||||| || ||||| |||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| || |||||| |||||||||||| |||||| || ||||||||||| | |
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||||||||||||||| |||||||| ||||||||||||| ||| | ||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| | ||||||| ||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| || |||| | ||||||||||||| |||| ||| ||||||||||| | |
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | | ||||||||||| ||||||||||||| || || |||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|| ||||||||| ||||||||| ||||| ||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 131/153 (85%)
Strand = Plus / Minus
Query: 7 actccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttga 66
||||||||| ||||| ||| ||||||||||||||||||||||||||||||| || |||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 67 ggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatgc 126
|||| || |||||||||||||| |||||||| |||| || |||||||| | ||| ||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 127 taaaatgacttacattgtggaatggaggaagta 159
|| ||||||||||||| || || ||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||||||||||||| | |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
|||| || | | |||||| | |||||||||| |||| || |||||||||||||| |||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 126 ctaaaatgacttacatt 142
||| |||||||||||||
Sbjct: 125 ctagaatgacttacatt 141
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 129 bits (65), Expect = 1e-29
Identities = 132/155 (85%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt- 62
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
|| || |||||| |||||||||| | |||||||||||||||||||||||| | |
Sbjct: 63 -----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaag 117
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||| ||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagta 152
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||| |||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| || | || | | ||| || | ||||||| |||||||||||||||||| | |||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 129 bits (65), Expect = 1e-29
Identities = 132/155 (85%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| || | ||||||||||| |||||||||||||||||||| |||
Sbjct: 92 atgaatctagacagatgt------ctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
|| |||||||||||||||| || |||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagtat 4
Score = 119 bits (60), Expect = 1e-26
Identities = 130/154 (84%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||| || |||||||||||| |||||||||||||||||||| |||
Sbjct: 65 atgaatctagacat------ctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||| ||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 129 bits (65), Expect = 1e-29
Identities = 132/156 (84%), Gaps = 10/156 (6%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
|||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 90
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| |||| | ||||||||||||||||| ||||| ||||||||| ||
Sbjct: 89 aatgaat----------atatatgtctagattcattaacattaatataaatgtgggaaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagtat 160
|||| |||||||||||||||| || |||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtat 4
Score = 115 bits (58), Expect = 2e-25
Identities = 118/140 (84%), Gaps = 10/140 (7%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||||||||| ||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||| |||||||||||||||||||||||||| |||
Sbjct: 65 atgaatctagacatatatat----------tcattaacatcaatatgaatgtgggaaatg 114
Query: 126 ctaaaatgacttacattgtg 145
||| ||||||||||||||||
Sbjct: 115 ctagaatgacttacattgtg 134
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||||| |||||||||||||||||| | | |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||| |||||||||||||||||| | |||||||||| | |||
Sbjct: 65 atgaatttagacatatatat--atctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 121 bits (61), Expect = 3e-27
Identities = 135/159 (84%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||||||| |||||||||||||||||| |||||||||| | | ||
Sbjct: 158 tgtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgt 99
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || |||||||| | |||| |||||||||||| | ||||||||||||| |
Sbjct: 98 taatgaatctag--atatatatatgtctaaattcattaacatgagtatgaatgtgggaaa 41
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtatgt 162
||| | ||||||||| |||||| || |||||||||||||
Sbjct: 40 tgccagaatgacttatattgtgaaacggaggaagtatgt 2
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 123 bits (62), Expect = 8e-28
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt- 63
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
|||||| | ||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 64 ---aatgtatctagatata--------gatacattaacatcaatatgaatgtgggaaatg 112
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| ||||||||||||||||||| |||||||||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagtat 147
Score = 105 bits (53), Expect = 2e-22
Identities = 129/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| || |||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt- 88
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
|||||| | | ||||||||| ||||||||||||||||||||||| | |||
Sbjct: 87 ---aatgta--------tctatatctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| |||||||||||||||| || ||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 121 bits (61), Expect = 3e-27
Identities = 131/155 (84%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| |||||||||||||||||| ||| ||||||||||| ||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt- 95
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
|| || |||||| |||||||||| | ||||||||||| |||||||||||| | ||
Sbjct: 94 -----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/154 (82%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| || | || | | ||| || | ||||||| |||||||||||||| ||| | |||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 121 bits (61), Expect = 3e-27
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||| ||| |||||||| |||||||| ||||||||||| || |||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || ||||||||| | || |||||||||||||| | |||||||||||| ||
Sbjct: 97 aatgaatctatgcatatatatgt--cttgattcattaacatctacatgaatgtgggaaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||||||| || ||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||| ||||||||||||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| | |||||||||| | |||||||||||||||| ||||||||||| | |||
Sbjct: 65 atgaatcaagacatatatatgca--tagattcattaacatctatatgaatgtgaaaaatg 122
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||| |||| || || ||||| ||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||||||||||| |||| |||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| | || | |||||| ||||||||||||| ||||| ||||||| |||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| ||||||||||||||||| ||||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||| || | | |||||||||||||||||| |||||||| |||| |||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| ||||||||||||| || || ||||| |||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtat 159
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||||||||||| || | |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||||| | || |||||||||||||||||||| ||||||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| ||||||||||||||| | | ||||||||||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||| | | | |||||||||||||||||| |||||||| | || |||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||||||||||| |||||||||||| || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtg 118
| |||| || |||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtg 117
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||||| ||| ||||| |||||||| | |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||||||||||| |||| |||||||||||| | |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| ||||||||||||| || || ||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 93/104 (89%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||| |||||||||||| ||||||||||| |||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaat 109
| |||| || || ||||||||||||||||||||||||||||||
Sbjct: 89 atgaatctagac--atatatctatctagattcattaacatcaat 48
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| ||
Sbjct: 79 tctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaa 138
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 139 cggagggagta 149
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 113 bits (57), Expect = 8e-25
Identities = 130/154 (84%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||| | ||||||||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| | || || || ||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 95 atggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| |||||| || ||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | ||||| ||||||| |||| ||||||||||||||||||| |||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
| ||||||||||||| || || ||||| ||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 147 aatggaggaagta 159
|| ||||||||||
Sbjct: 122 aacggaggaagta 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattga 80
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||| ||| ||||||||| ||||||||| | |||||| |||||||||||||||
Sbjct: 4 gtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattga 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
|||||||||||||||||| | |||| ||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtg 19
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| |||||||||||| || | |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||| | ||||||||||| |||| |||||||| | | | |||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
|| |||||||||||||||| || ||||| |||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtat 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||| ||||| | | |||||||| || | |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || || |||||| | | || |||||||| |||| |||||||||||| | |||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| |||||||||||||||| || ||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||| ||| ||||||||| ||||||| ||||||||||||| || | |
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggt 100
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || |||||| | | |||||||||||||||||||| ||||| || |||| |
Sbjct: 99 aatgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaag 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| ||||||||||||| || || ||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||||||||||||| || |||| || ||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||| | || | | ||||||||||| |||| ||||||||||||| |||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||| || || ||||| ||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||| ||| ||||||||||||||||| || |||||||||| || |||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || ||| | || | |||||| ||||||||||||| |||| ||||||| ||
Sbjct: 64 aatgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| ||||||||||||| || || ||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggaggaagta 158
Score = 93.7 bits (47), Expect = 7e-19
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| ||||||||||||||||| ||||||| |||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||| || | | |||||||||||||||||| |||||||||| || |||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 15 cggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 65 gaggaatgtanacatata 82
| |||| || |||||||
Sbjct: 64 aatgaatctagacatata 81
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||||||||||| || | |||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||| | || |||||||||||||||||||| ||||||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| ||||||||||||||| | | ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||| | | |||||||||||||||||||| |||||||| | || |||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||||||||||| |||||||||||| || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||||||| ||||||||||||||| |||| ||||| ||||| | ||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 87.7 bits (44), Expect = 4e-17
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||||||| |||| ||||| ||||| || | |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | |||||| | |||||||||||| |||| |||||||||||| | |||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| ||||||||||||| || || ||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 90 ctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaat 149
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 150 ggaggaagta 159
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattga 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 97 cattaacatcaatatgaatgtgggagatgctaaa-atgacttacattgtggaatggagga 155
||||| ||||||||||||||||||| |||||||| ||||||||||||||| || |||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 156 agta 159
||||
Sbjct: 140 agta 143
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 127/154 (82%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||| || ||||| ||||||||||||||||||||||||||| | |||
Sbjct: 86 atgaaactagacata------------gattcattaacatcaatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 115/140 (82%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||||||||||||||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||||| ||||||||||||||||||||||||||| |||
Sbjct: 65 atgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 126 ctaaaatgacttacattgtg 145
||| ||||||||||||||||
Sbjct: 113 ctagaatgacttacattgtg 132
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 90 ctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaat 149
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 150 ggaggaagta 159
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattga 89
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 97 cattaacatcaatatgaatgtgggagatgctaaa-atgacttacattgtggaatggagga 155
||||| ||||||||||||||||||| |||||||| ||||||||||||||| || |||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 156 agta 159
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 107 bits (54), Expect = 5e-23
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||| ||| ||||||||||||||||||| || ||||||||||| ||
Sbjct: 3 tgtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagatt 96
| | |||| || |||||||||||||||||||||
Sbjct: 63 taatgaatctagacatatatatctatctagatt 95
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttac 139
|||||| | ||||||||||||||||||||||||||| || || |||||| ||||||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttac 25
Query: 140 attgtggaatggaggaagta 159
||| || || ||||| ||||
Sbjct: 24 attatgaaacggagggagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 142 tgtggaatggaggaagta 159
|||| || ||||| ||||
Sbjct: 119 tgtgaaacggagggagta 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattga 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||| ||||| |||||| |||||||||||||||| || ||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 103 bits (52), Expect = 7e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 76 acatatatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgac 135
|||| |||||||||||||||||||||||||||||||| | ||| | |||||||||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 136 ttacattgtggaatggaggaagta 159
|||||||||| || ||||||||||
Sbjct: 107 ttacattgtgaaacggaggaagta 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||| ||||| ||||||||| ||| |||||||||||| ||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgt 144
|||| ||||||||| || |||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgt 20
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttg 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 101 aacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||||||| |||||| ||||||||||||| || || ||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||| |||||||| ||||||| ||||||| | |
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||||| ||| |||||||| ||||||| | |||||| || |||
Sbjct: 92 atgaatctagagatatat------ctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| || ||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/157 (82%), Gaps = 6/157 (3%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| ||||||||| ||||||||| |||||| | ||||| | |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || | ||||||| |||||||||||| ||||||||| ||||||| | ||
Sbjct: 64 aatgaatttaga----tatatct--ctagattcattagcatcaatataaatgtggaaaat 117
Query: 125 gctaaaatgacttacattgtggaatggaggaagtatg 161
|||||||||||||| |||||| || ||||| ||||||
Sbjct: 118 gctaaaatgacttatattgtgaaacggagggagtatg 154
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 103 bits (52), Expect = 7e-22
Identities = 127/155 (81%), Gaps = 14/155 (9%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| | |||||||| || ||||||||||||||||||||| ||
Sbjct: 64 catgaatttg--------------tctagatttatgaacatcaatatgaatgtgggaaat 109
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||||||||
Sbjct: 110 gctagaatgacttacattgtgaaacggaggaagta 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 90
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 93 gattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgga 152
||||||||||||||||||||||||||||| |||||| |||||||||||||||| || |||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 153 ggaagta 159
|||||||
Sbjct: 11 ggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 93 gattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgga 152
|||||||||||||||||||||||||| || |||||| ||||| |||||||||| || |||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 153 ggaagta 159
|| ||||
Sbjct: 135 gggagta 141
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |
Sbjct: 76 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 148 atggaggaagtatgt 162
| ||| |||||||||
Sbjct: 16 acggaagaagtatgt 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattga 59
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |
Sbjct: 76 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 148 atggaggaagtatgt 162
| ||| |||||||||
Sbjct: 16 acggaagaagtatgt 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattga 59
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 15 cggaggtagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 3 tgtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 64 tgaggaatgtanacatatata 84
| | |||| || |||||||||
Sbjct: 63 taatgaatctagacatatata 83
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | | |||||||| | ||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| | |||| |||||||||||||||||||| || |||||||||| |||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||||| | ||||||||||| || ||||| ||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | || || |||| |||||||||| || || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||||| | | |||||||||||||||||| ||||||||||| | |||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| | | ||||||||||| || ||||| ||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgt 83
Query: 64 tgaggaatgtanacatat 81
| | |||| || ||||||
Sbjct: 82 taatgaatctatacatat 65
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| || |
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 151 gaggaagta 159
|||| ||||
Sbjct: 132 gagggagta 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||| | |||||||||| | || |||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| |||||| | |||||||||||||||||| ||||||||||||| ||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || |||||||||| || || ||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||||| |||||| ||| ||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaat 115
| |||| || |||||||||| | |||||||||||||||||| ||||||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
|||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 147 aatggaggaagtat 160
|| |||||||||||
Sbjct: 103 aacggaggaagtat 116
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattga 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcat 42
|||||||||| ||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/157 (82%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||| ||| |||| | || ||||||| | ||||||||||| || ||
Sbjct: 3 tgtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||| | |||| | |||||||||||||||||| ||||||||||||| |
Sbjct: 63 taatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaa 122
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtat 160
||||| || | |||||||| || || |||||||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggaggaagtat 159
Score = 93.7 bits (47), Expect = 7e-19
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||| | |||||||||| ||||||||||||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||||| | | |||||||||||||||||| ||||||||||| | |||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||| | |||||||| || || ||||| ||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||| ||| |||| | || ||||||| | ||||||||||| || ||
Sbjct: 160 tgtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgt 101
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||| | |||| | |||||||||||||||||| ||||||||||||| |
Sbjct: 100 taatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaa 41
Query: 124 tgctaaaatgacttacattgtggaatggaggaagtat 160
||||| || | |||||||| || || |||||||||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggaggaagtat 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||| | |||||||||| ||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | |||||| | | |||||||||||||||||| ||||||||||| | |||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
|||||| | |||||||| || || ||||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 86 ctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 146 gaatggaggaagta 159
|| ||||||||||
Sbjct: 114 aaacggaggaagta 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattga 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttc 45
||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagta 159
|||||| |||||||||||||||| || ||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| || |
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 151 gaggaagta 159
|||||||||
Sbjct: 124 gaggaagta 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattga 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattga 78
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 101 aacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||||| | |||||| |||||||||||||||| || ||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||| || | ||| || || ||||||||||||||||| ||||||||| ||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| |||||||||||||||| || ||||||||||
Sbjct: 118 ctagaatgacttacattgtgaaacggaggaagta 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 128/155 (82%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| ||||||||||||| |||||||||||| ||||||| |||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtt- 93
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
|||| | || || ||| || ||| ||||||||||||||||||||||||||| ||
Sbjct: 92 ---aatg-aaacttaaata--gatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
|| ||||||||| |||||| || ||||| |||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
|||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| || |
Sbjct: 69 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaa 128
Query: 148 atggaggaagtat 160
| |||||||||||
Sbjct: 129 acggaggaagtat 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
|||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| |
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 148 atggaggaagta 159
| ||||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||| || ||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 125 cggaggaagtat 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 83
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 107 aatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
||||||||||||||| |||||| |||||||||||||||| |||||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtat 4
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 92 agattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgg 151
|||||||||| ||||||||||||||||||| |||||| |||||||||||||||| || ||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 152 aggaagta 159
||||||||
Sbjct: 12 aggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 139 tgtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattga 83
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 59
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaag 157
|||||||||||||||||||||||| |||||| |||||||||| ||||| || ||||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 158 ta 159
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/154 (83%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| ||| || ||| || | ||||||||||||||||||||||||||||| | |||
Sbjct: 89 atgaa-----ac---tatgtc-acatagattcattaacatcaatatgaatgtggaaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||||||| || || ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 95 ttcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
|||||||||||||||||||||||| || |||||| ||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtg 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattga 59
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaa 17
Query: 148 atggaggaagta 159
| ||||| ||||
Sbjct: 16 acggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||| || ||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||||||||||||||||||||||||||| | | | |||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatatagtaaatg 112
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| ||||||||| ||||||||||
Sbjct: 113 ctagaatgacttatattgtggaacggaggaagta 146
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||| | |||||||||| | || || ||||| || |||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || ||| ||| || | |||||||||||||||||| | |||||| |||| ||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
||||||| | ||||||||||| || ||||||||||
Sbjct: 124 gctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 122/154 (79%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||| | || ||||||| |||| |||||| | || |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||| ||| | | ||||||||||||| || ||||| || || | |||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |
Sbjct: 75 atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaa 134
Query: 148 atggaggaagta 159
| ||||| ||||
Sbjct: 135 acggagggagta 146
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||| || ||||||||||||||||||||| |||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||||||||||||||||||||||||||| | | | |||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatatagtaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| ||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttatattgtggaacggaggaagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||| ||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 126 cggaggaagtat 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||| |||||||||||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattga 82
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattca 54
||||| ||||| ||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 111 tgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||| || ||| ||| |||||||||||| || ||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 96 tcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagga 155
||||||||||| |||||||||||||| |||||| |||||||||||||||| || ||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 156 agtatgta 163
||||||||
Sbjct: 127 agtatgta 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 79
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagt 158
|||||||| |||||||||||||| |||||| |||||||||||||||| || ||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 159 a 159
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 129 cggagggagta 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattga 85
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcat 55
|||| ||||| ||||| ||| |||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| || ||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 119 cggaggaagta 129
Score = 85.7 bits (43), Expect = 2e-16
Identities = 84/97 (86%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 66 aggaatgtanacatatatatctatctagattcattaa 102
| | || || || |||||||||||||||| ||||||
Sbjct: 69 atggatctagac--atatatctatctagatccattaa 35
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgt 83
Query: 64 tgaggaatgtanacatat 81
| | |||| || ||||||
Sbjct: 82 taatgaatctatacatat 65
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
||||||||||||||||||||||||||||| | |||||| ||||||||| |||||| || |
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 151 gaggaagta 159
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 59
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 93 gattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgga 152
||||||||| ||||||||||||||||||| |||||| |||||||||||||||| || |||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 153 ggaagta 159
|| ||||
Sbjct: 11 gggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattga 84
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 93 gattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgga 152
||||||||| ||||||||||||||||||| |||||| ||||||||||||| || || |||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 153 ggaagta 159
|| ||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 15 cggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattga 59
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcat 55
|||| ||||| ||||| ||| |||||||||||||||||||||| ||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 116
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattga 76
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaag 157
|||||||||||||||||||||| | |||||| ||||||||| |||||| || |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 158 ta 159
||
Sbjct: 2 ta 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcatattga 55
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattga 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacatt 52
|||| ||||| ||||| ||| ||||||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 137 cggagggagta 147
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| ||||||||| ||| ||||| ||||||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattga 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
|||||||||||||| |||||| | || ||||||||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtg 19
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattga 59
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatattgaa 61
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattgaa 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||||| |||||| ||||||||| |||||| || ||||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 105 tcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtg 101
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 80
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtatgt 162
|||||||||||||||||| |||||| |||||||||||||||| || |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatgt 2
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 59
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||||||||||||| ||| ||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 147 aatggaggaagta 159
|| ||||| ||||
Sbjct: 120 aacggagggagta 132
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
|||||||||||||||||||||||| ||| |||||| |||||||||||||||| || ||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 154 gaagta 159
||||||
Sbjct: 109 gaagta 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcat 55
||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 66 aggaatgt 73
| ||||||
Sbjct: 54 atgaatgt 47
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 110 atgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
|||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
|||||||| ||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 50 atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtatgt 162
|||||||||||||||||| |||||| |||||||||||||||| || |||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatgt 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 78
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||||||||||||| ||| ||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 147 aatggaggaagta 159
|| ||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 147 aatggaggaagtat 160
|| ||||| |||||
Sbjct: 123 aacggagggagtat 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattga 81
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattga 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 100 taacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| | |||||| ||||||||| |||||| || ||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| ||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 147 aatggaggaagta 159
|| ||||| ||||
Sbjct: 111 aacggagggagta 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattga 69
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcattt 44
|||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagtat 160
|||||| |||||||||||||||| || |||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttac 139
|||||| | |||||||||||||||||| ||||||||||| | |||||| ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 140 attgtggaatggaggaagtat 160
||| || ||||||||||||||
Sbjct: 113 attatgaaatggaggaagtat 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||||||||| ||| ||||||||||||||||| | ||||||||||| || |||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 66 aggaatgtanacatatatat 85
| |||| || ||||||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||| ||| ||||||||||||||||| || | ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 103 catcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 125/155 (80%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatg-- 61
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| | ||| ||||||||||||| |||||||||||||| ||| || || ||
Sbjct: 62 -----------atagatagatctatctagatttattaacatcaatataaatatgagaaat 110
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| |||||||||||||||| || ||||| ||||
Sbjct: 111 gctagaatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
|||||||||||||||| |||||||||||||| |||||| |||||||||||||||| || |
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 151 gaggaagta 159
|||| ||||
Sbjct: 13 gagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 92/109 (84%), Gaps = 8/109 (7%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaa 114
| |||| || ||| ||||||||||||||||||||||||||||
Sbjct: 65 atgaatctaaaca--------tatctagattcattaacatcaatatgaa 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||||||||||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtg 19
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 95 ttcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagg 154
||||||||||||||||||||||||||| |||||| |||||||| ||||||| || |||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 155 aagta 159
|||||
Sbjct: 9 aagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattga 59
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
||||||||||||||||||||||||||||| | || ||||||||||||| |||||| || |
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 151 gaggaagta 159
|||||||||
Sbjct: 122 gaggaagta 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||||| | || | |||||||||||||||||| || ||||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||| | | |||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattga 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||| ||| |||| |||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattga 76
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
|||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||
Sbjct: 77 tatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtga 18
Query: 147 aatggaggaagta 159
|| ||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattga 59
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 97 cattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaa 156
|||| |||||||||||||| ||||| |||||| |||||||||||||||| || |||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 157 gtatgt 162
||||||
Sbjct: 140 gtatgt 145
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||| ||||||||| ||| || || ||||||||||||||||||||||| ||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattga 85
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 103 catcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtatg 161
||||||||||||||||| | |||||||||||||||| |||||| || ||||| ||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtatg 141
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 96 tcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagga 155
|||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 156 agta 159
||||
Sbjct: 8 agta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattga 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 100 taacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| | |||||||||| | |||||||||| || ||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| ||| | ||| |||||||| |||||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattga 74
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||||||||||||||||| || || ||| ||||||||||||| || ||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||| ||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattga 59
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 107 aatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||| || |||||| ||||||||||||| || |||||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 76 acatatatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgac 135
|||||||||||||||||||||||||| ||||||||| ||| || || || ||| ||||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 136 ttacattgtggaatggaggaagta 159
||| |||||| || ||||||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||| ||||| ||||||||| ||||||||||||| ||||| || ||| |||||||
Sbjct: 3 tgtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattga 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttc 45
|||||||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 130 tgtactccctccgtttcataatgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||| ||||||||| ||| ||||| |||||| |||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 149 tggaggaagtat 160
||||| |||||
Sbjct: 15 cggagggagtat 4
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattga 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| |||||| |||| ||||||||||| || ||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| || |||||| ||||||||| |||||||||||| ||| |||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattga 59
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaa 61
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgaa 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt-ccacattcatattga 58
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 105 tcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||| |||||| ||||||||| |||||| || ||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||| ||| |||||| ||||||||| |||||| || ||||| |||||
Sbjct: 59 atcaatatgaatgt-ggaaatgctagaatgacttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
||||||||||||||||||||||||||||||||||||| | ||| || |||| |||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 142 tgtggaatggaggaagta 159
| || || ||||||||||
Sbjct: 113 tatgaaacggaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||| |||||| ||||||||| |||||| || ||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||| ||| |||| ||||||| ||||| ||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattga 76
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | |||||||||| |||| |||||| | || | |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||| ||| | | ||||||||||||||| ||||| ||||||| |||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||| | |||||||||| ||||||| ||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| ||| || | ||||||||||||| |||| | |||||| |||| |||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| || | ||||||||||| || ||||| |||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||| ||| | |||||| |||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaa 134
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 135 cggagggagta 145
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/153 (80%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||| |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | ||||||| |||||||||||||| |||||| || |||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagt 158
||| ||||||||||||| || || |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 86 ctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||| |||||||||||||||||||||| ||| | ||| || ||||||||||||||||
Sbjct: 78 ctatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 146 gaatggaggaagtat 160
|| |||||||||||
Sbjct: 18 aaacggaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||||||||||| ||||| ||| ||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 66 aggaatgta 74
| |||||||
Sbjct: 65 atgaatgta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||| ||| ||||||||| ||| |||| || |||||||||||
Sbjct: 137 gtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattga 82
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattga 59
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 103 catcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||| |||||| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccaca 50
|||||||||| ||| ||||| ||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 82
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattga 59
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||||| |||||| ||||||||| |||||| || |||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||| |||||| ||| ||||| |||||||| ||||||| | |||||| ||||||||||||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacat 23
Query: 142 tgtggaatggaggaagta 159
|||| || ||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 tgtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattga 59
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 107 aatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||| |||||| ||||||||| |||||| || ||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 103 catcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||||||||| ||||| |||||| ||||||||| ||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtg 19
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | |||||||||| ||| ||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | ||||| | ||||||||||||| |||| || |||||||||| |||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | |||||||| || || ||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||| | |||||||||| |||||||||| || || | |
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| ||||| ||| |||||||||||||||| ||||||||| ||| |||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattga 59
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||| |||||| ||| ||||| |||||||| ||||||||| |||||| ||||||||||||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacat 23
Query: 142 tgtggaatggaggaagta 159
|||| || ||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||||| |||||| ||||||||| |||||| || |||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaa 103
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcat 55
||||||||||| ||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 28 aagtcattctagcatttcccacattcatattga 60
|||||||| ||||||||||||||||||||||||
Sbjct: 92 aagtcattttagcatttcccacattcatattga 60
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 85.7 bits (43), Expect = 2e-16
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 32 cattctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatct 91
||||||||||||| |||||||||||| | ||| | |||| || |||| ||||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 92 agattcattaacatcaatatgaatgtggga 121
||||||||||||| | ||||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtggga 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 32 cattctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatct 91
||||||| |||||||||||||||||| | ||| | |||| || | ||||||| | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 92 agattcattaacatcaatatgaatgtgggagatgctaaaatg 133
||||||||||||| | |||||||||||| | |||||| ||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 77 catatatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgact 136
||||||||| |||||||||||||||||| ||||||||| ||| | |||||| || ||||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 137 tacattgtggaatggaggaagta 159
||||||||| || ||||||||||
Sbjct: 112 tacattgtgaaacggaggaagta 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||| ||| |||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
||||| ||||| ||||||||| |||||| ||||||||||| ||| |||||||||
Sbjct: 135 gtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatatt 82
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
||||||||| |||||||||||||| ||| |||||| |||||||||||||||| || ||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 154 gaagta 159
||||||
Sbjct: 121 gaagta 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
||||||||||| ||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattga 72
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||| |||||| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
|||||||||||||||||||||| ||| | |||||| |||||||||||||||| || ||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 154 gaagta 159
||||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattga 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||| |||| ||||| ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattga 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacatt 142
|||||||||||||| ||| | |||||| |||||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacatt 112
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
||||||||||| ||||||||||||| || |||||| |||||||||||||||| || ||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 154 gaagta 159
||||||
Sbjct: 10 gaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattg 59
||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattg 58
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtatg 161
|||||||| ||| | |||||| |||||||||||||||| || ||||| ||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtatg 132
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||||||||||||||||||||||||||||| | ||| | |||||| ||||||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 142 tgtggaatggaggaagta 159
|||| || ||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||| ||||| ||||||||||||| ||||| |||||||||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcattt 44
|||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcattt 92
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaag 157
|||||||||||||||||||||| | || |||||||||||||||||||| || ||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 158 ta 159
||
Sbjct: 6 ta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||| ||| |||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattga 59
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 127/156 (81%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||| ||| |||| | |||||| ||| |||| |||||||| || |||
Sbjct: 4 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| ||| || | ||||| || | |||||||||||||||||| |||||||||||| ||
Sbjct: 64 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 123
Query: 125 gctaaaatgacttacattgtggaatggaggaagtat 160
|||||| | ||||||||||| || ||||| |||||
Sbjct: 124 cctaaaaagtcttacattgtgaaacggagggagtat 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | || ||| ||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| |||| || |||||| ||| ||||||| |||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatggg 44
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 127/156 (81%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||||||| |||| | |||||| | | |||| |||||||| || ||
Sbjct: 3 tgtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||| |||| | |||||||||||||||||| ||||||||||||| |
Sbjct: 63 taatgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaa 122
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
| ||| || | ||||||||||| || ||||| ||||
Sbjct: 123 tactagaaagtcttacattgtgaaacggagggagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | |||||| ||| ||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| |||| || |||||||| | |||| ||||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatggg 44
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||| | ||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 120 cggaggaagtat 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||| ||||| ||||||||| ||||| ||||||||||||| |||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||| || |||||| ||| |||||||||||| || ||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 127/156 (81%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||| ||| |||| | |||||| ||| |||| |||||||| || |||
Sbjct: 159 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 100
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| ||| || | ||||| || | |||||||||||||||||| |||||||||||| ||
Sbjct: 99 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagtat 160
|||||| | ||||||||||| || ||||| |||||
Sbjct: 39 cctaaaaagtcttacattgtgaaacggagggagtat 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 96/115 (83%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | || ||| ||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| |||| || |||||| ||| ||||||| |||||||||||| |||||||| ||||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatggg 119
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 107 aatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacatt 52
|||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatt 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
||||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 95 ttcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagg 154
||||||||||||| ||| ||||||||| |||||| ||||||||| |||||| || |||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 155 aagtat 160
|||||
Sbjct: 117 gagtat 122
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/151 (82%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| ||||||||||||| ||| ||||||||| ||| || |
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || || |||||| | | ||||||||||||||| ||||||||||||| |||
Sbjct: 96 atgaatctagccacatatatgt--ccagattcattaacatctatatgaatgtgggcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaa 156
||| ||||||||| ||| || || |||||||
Sbjct: 38 ctagaatgacttatattatgaaacggaggaa 8
Score = 69.9 bits (35), Expect = 1e-11
Identities = 121/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 11 cctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttgaggaa 70
||||| ||||| ||| ||||||||||||||||| ||||||||||||| || ||| | |||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 71 tgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatgctaaa 130
| | || |||||| | |||||||||||| ||| ||| ||||||||| || ||| |
Sbjct: 70 tctggac--atatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 131 atgacttacattgtggaatggaggaagta 159
|||||||| |||||| || ||||| ||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||||||||||||||||||||||||||| | | | |||||| ||||||||||||||||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 147 aatggaggaagta 159
|| ||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| |||||||||||||||||| | | |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattga 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaag 157
|||||||||||||||||||| ||| || || ||||||||| |||||| || ||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 158 tat 160
|||
Sbjct: 137 tat 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||| |||||| |||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattga 84
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 9 tccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattga 59
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||| |||| |||||||||||| || |||||| |||||||||||||||| ||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 149 tggagg 154
|||||
Sbjct: 128 cggagg 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 9 tccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
||||||| ||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 86
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagg 154
||||||||||||||||| || |||||| |||||||||||||||| || |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 96 tcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagga 155
|||||||||||||||||||||||| | ||||||||||||||||||| || || ||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 156 agta 159
||||
Sbjct: 8 agta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattga 69
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
|||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtg 109
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||| ||| ||||||||| ||||| || |||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattga 59
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 82 atatctatctagattcattaacatcaatatgaatgtggga 121
||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtggga 44
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattga 83
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||| ||||| |||||| |||||||||||||||| || ||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcat-tctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||| |||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattga 60
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 105 tcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||| || |||||| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 17 tttcacaatttaagtcattctagcatt 43
||||||||| |||||||||||||||||
Sbjct: 93 tttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 92 agattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgg 151
|||||||||| |||||||||||||||| || |||||| ||||||||| |||||| || ||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 152 aggaagta 159
||||||||
Sbjct: 128 aggaagta 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattga 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||| |||||| || ||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattga 59
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 96 tcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||||| |||||||||||||||| || |||||| ||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 23
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||| | |||||||||| ||| || ||||| || |||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtt 100
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || | ||||| | | |||||||||||||||| | | ||||||||||| ||
Sbjct: 99 aatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| || | ||||||||||| || ||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||| | |||||||||| ||||||||||| | | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||| | ||| ||| |||||||||||||||| ||||| || ||| |||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 79.8 bits (40), Expect = 1e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattga 71
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 59
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||| | |||||| ||| |||||||||||| || ||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||| | |||||| ||| |||||||||||| || ||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 92 agattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatgg 151
||||||||||| |||||| ||||||||||| |||||| ||||||||| |||||| || ||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 152 aggaagta 159
||||||||
Sbjct: 128 aggaagta 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattga 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattga 81
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||| | |||||||||| |||| |||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||| ||| ||| |||||||||||||||| ||||| | ||||| ||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| || | ||||||||||| || ||||| |||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
Score = 77.8 bits (39), Expect = 4e-14
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | |||||| ||| ||||| | ||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || | | ||| || | |||||||||||||||||| | |||||| |||| |||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| ||||||||||||| || ||| | |||| || || |||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 94 attcattaacatcaatatgaatgtggg 120
|||||||||||| |||||||||||||
Sbjct: 46 attcattaacatatatatgaatgtggg 20
Score = 71.9 bits (36), Expect = 3e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| ||||||||||||| | ||| | |||| || | |||||||| | ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 94 attcattaacatcaatatgaatgtggg 120
||||||||||||| |||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtggg 95
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacatt 52
|||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatat 57
||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 113 aatgtgggagatgctaaaatgacttacattgtggaatggaggaagtatgt 162
||||||||| |||||| |||||||||||||||| || ||||| |||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagtatgt 152
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||| ||||||||| |||||| |||||||||||||||| || ||||| |||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtg 145
|||| ||||||||| |||||| ||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtg 92
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
||||||||| | ||||||||||| || || | |||| || |||||||||| | |||||
Sbjct: 106 ttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatgtgtctag 47
Query: 94 attcattaacatcaatatgaatgtgggagatgcta 128
||||||||||||| ||||||||||||| |||||||
Sbjct: 46 attcattaacatctatatgaatgtgggtgatgcta 12
Score = 71.9 bits (36), Expect = 3e-12
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
||||||||| ||||||||||||| || ||| | |||| || ||| |||||| | |||||
Sbjct: 9 ttctagcatcacccacattcatatagatgttaatgaatctagacacatatatatgtctag 68
Query: 94 attcattaacatcaatatgaatgtgggagatgcta 128
||||||| ||||| ||||||||||| | |||||||
Sbjct: 69 attcatttacatctatatgaatgtgtgtgatgcta 103
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacat 51
||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 114 atgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||| |||||| |||||||||||||||| || ||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatt 43
|||||||||| ||||||||| ||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||||| ||||||||||||| |||||| || |||||||||| || ||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 15 cggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||| ||| |||||| |||||||||| ||||||||||||| || |||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 65 gaggaatgtanacatata 82
| |||| || |||||||
Sbjct: 64 aatgaatctagacatata 81
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||||| ||||||||||||| |||||| || |||||||||| || ||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 92/111 (82%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||| ||| |||||| |||||||||| ||||||||||||| || |||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaat 115
| |||| || ||| | ||| | |||||||||||||||||| | ||||||
Sbjct: 64 aatgaatctagacacacata--tgtctagattcattaacatctagatgaat 112
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattga 84
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 86 ctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
|||||||||||||||| ||||| ||||||||||| | |||||| ||||||||| ||| ||
Sbjct: 78 ctatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatg 19
Query: 146 gaatggaggaagtat 160
|| ||||||||||
Sbjct: 18 aaacagaggaagtat 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||||||| |||||| ||||||||||||| || || ||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcata 56
||||| ||| |||||||||||||||||| |||||||||||
Sbjct: 16 tttcataatataagtcattctagcattttccacattcata 55
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 71
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||| | |||||| ||| |||||||||||| || ||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 104 atcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||||| | |||||| ||| |||||||||||| || ||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 81 tatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttaca 140
||||||||| ||||||||||||||||||||| | ||||| | |||||| ||| |||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 141 ttgtggaatggaggaagta 159
||||| || ||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
||||||||||| ||||||||| ||||| |||||||||||| ||||| | |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattga 59
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | ||||| |||| ||||||||||||| || | |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||| ||| ||| |||||| |||| |||| ||||||||||||| |||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | |||||||| || || ||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||| |||| ||||||||||||| ||| || || | ||||||||||| ||
Sbjct: 88 tctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaa 147
Query: 149 tggaggaagtat 160
||||| |||||
Sbjct: 148 cggagggagtat 159
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttac 139
|||||| | ||||||||||||| ||||||||||||| || | ||||||||||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 140 attgtggaatggaggaagt 158
|||||| || |||||||||
Sbjct: 113 attgtgaaacggaggaagt 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatat 57
||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 11 cctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttgaggaa 70
||||| ||||||||| ||||||||| |||||||| || ||||||||||| | | | |||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 71 tgtanacatatatat 85
| || ||||||||||
Sbjct: 67 tctagacatatatat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtg 145
||||||||| |||| |||||| ||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtg 19
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttac 139
|||||| |||||||||| |||||||||| ||||||||||||| || ||| ||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 140 att 142
|||
Sbjct: 125 att 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcata 56
|||||||||| ||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcata 94
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaag 157
|||||||||| |||||||||| | |||||| ||||||||||||| || || ||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 158 ta 159
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattga 59
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 100 taacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||| ||||||||||| |||||| ||| ||||| |||||| || ||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttc 45
|||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttc 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagtat 160
|||||| |||||||||||||||| || |||||||||||
Sbjct: 90 atgctagaatgacttacattgtgaaacggaggaagtat 127
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattga 59
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 103 catcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||||||||||| || || ||| |||||||||||||||| || ||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcata 56
|||| ||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 109 tatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||| |||||| |||||||||||||||| || ||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttc 45
|||||||||| ||||||||| |||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 101 aacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||| ||| | |||||| |||||||||||||||| || ||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattga 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
||||||||| ||||||||||||||||||| | |||||| ||| |||||||||||| || |
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 151 gaggaagtat 160
|||| |||||
Sbjct: 13 gagggagtat 4
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattga 59
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||| || |||||| |||||||||||||||| || ||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||||||||||||||||||||| | ||| || ||||||||| ||| || ||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 129 cggaggaagta 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||||||||||| ||||| ||||||||||||||| |||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 66 aggaatgtanacatata 82
| |||| || |||||||
Sbjct: 79 atgaatctagacatata 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcattt 44
|||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||| ||||||||||||||||||||||||||||||||| | ||| || | ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 142 tgtggaatggaggaagta 159
||| || ||||| ||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| |||||| || ||||||| |||| ||||| |||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattga 76
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
|||||||||||||| |||||||||||||||| | |||||| ||| |||||||||||| |
Sbjct: 76 atctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaa 17
Query: 148 atggaggaagtat 160
| ||||| |||||
Sbjct: 16 acggagggagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattga 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
||||| |||||||| ||||||||| ||||| | | |||||||||||| |||||||||| |
Sbjct: 75 atctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaa 134
Query: 148 atggaggaagta 159
| ||||| ||||
Sbjct: 135 acggagggagta 146
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacatt 52
|||||||||||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 118 tgtactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattc 53
|||||||||| ||||||||| ||||||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 113 aatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||| | |||||| |||||||||||||||| || ||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 107 aatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||| || |||||||||||||||||||| || ||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||| ||||| ||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcatt 35
||||||||||| ||||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 83 tatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacatt 142
||||||| |||||| |||||||||||||| | ||||| | |||||| |||||||||||||
Sbjct: 63 tatctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
Query: 143 gtggaatggaggaagta 159
||| || ||||| ||||
Sbjct: 123 gtgaaacggagggagta 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||||||||| ||||| | |||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattga 85
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcattt 44
||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcattt 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||||||||| |||||||| ||||
Sbjct: 41 atgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 126/156 (80%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| |||| | |||||| || |||||||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| | |||| | |||||||||||||||||| |||||||||| | |||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtatg 161
||| || | |||||||| || || ||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtatg 3
Score = 69.9 bits (35), Expect = 1e-11
Identities = 94/114 (82%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||| ||| |||| | |||||||||| | |||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgg 119
| |||| || |||||||| | | | |||||||||||||||| ||||||||||||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtgg 118
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| | | |||| | |||||||||| |||||| |||||| || |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| ||| || ||| |||||| | ||||||||||||| |||| |||||||||||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtggg 119
Score = 63.9 bits (32), Expect = 6e-10
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| ||||||||||||| || | | | |||| || |||||||||| | | |||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtatag 71
Query: 94 attcattaacatcaatatgaatgtggg 120
|||||||||||| |||||| ||||||
Sbjct: 70 gttcattaacatctatatgattgtggg 44
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcat 55
|||||||||||| ||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 110 atgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||| |||| ||||||||||||||||||||||| || ||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccaca 50
|||| ||||| ||||||||| |||||||||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagtat 160
|||||| |||||||||||||||| || |||||||||||
Sbjct: 72 atgctagaatgacttacattgtgaaacggaggaagtat 109
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||||||| |||| | |||||| ||| |||| |||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| |||| || |||||||| | |||| ||||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatggg 44
Score = 65.9 bits (33), Expect = 2e-10
Identities = 125/156 (80%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| |||||| || |||| | |||||| | | |||| |||||||| || ||
Sbjct: 3 tgtactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgt 62
Query: 64 tgaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggaga 123
| | |||| || ||| |||| | |||||||||||||||||| |||||||| |||| |
Sbjct: 63 taatgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaa 122
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
| ||| || | ||||||||||| || ||||| ||||
Sbjct: 123 tactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 81 tatatctatctagattcattaacatcaatatgaatgtgggagatgcta 128
|||||||||||||||||||||| ||||||||||| |||||| ||||||
Sbjct: 49 tatatctatctagattcattaatatcaatatgaacgtgggaaatgcta 2
Score = 63.9 bits (32), Expect = 6e-10
Identities = 78/93 (83%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 36 ctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctagat 95
|||||||||||||| |||||||||| || | |||| || | | ||||| ||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatata---atctagat 57
Query: 96 tcattaacatcaatatgaatgtgggagatgcta 128
||||||| ||||||||||| |||||| ||||||
Sbjct: 58 tcattaatatcaatatgaacgtgggaaatgcta 90
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||||||| |||| | |||||||||| ||||||| ||| | || |||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtt 100
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| ||| || ||||||| || | | |||||||||||||||| | ||||||| || ||
Sbjct: 99 aataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaat 40
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||||||||
Sbjct: 39 actataaagtcttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 122/154 (79%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||| | || ||| ||| || ||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || |||||| ||| | |||||||| ||||||||| | ||| ||||||| |||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||| || | ||||||||||| || ||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||||||||| ||| ||||||||||||| |||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||||||||| ||| |||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattga 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||| | || ||| |||||||||||||||| || ||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 105 tcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||||||||| | || ||| ||||||||||||| || |||||||| ||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattga 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||| ||||| ||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
|||||||||||| |||||||||||| || || |||||| ||||||||||||| || || |
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 151 gaggaagta 159
|||| ||||
Sbjct: 118 gagggagta 126
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
||||||||||||| ||||||||||||| ||||| || ||| ||||||||||||| || ||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 126 cggagggagta 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||| ||| ||||||||||||| |||||||| |||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattga 82
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| ||||| ||||||| ||||| || |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattga 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 103 catcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||| || || || ||| ||| |||||||||||| || ||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 114 atgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
|||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacat 51
|||| ||||| || |||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagc 40
||||||||||| ||||||||| ||||||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 69.9 bits (35), Expect = 1e-11
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| | | |||| | |||||||||| ||||||||||||| || |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 66 aggaa--tgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| ||| | || ||| | |||| ||| |||||||||||||||| |||||||||||||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtggg 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 74/89 (83%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatcta- 92
|||||||||| ||||||||||||| || ||| | |||| || | |||||| | | | ||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtat 92
Query: 93 -gattcattaacatcaatatgaatgtggg 120
|||||||||||||| |||||||||||||
Sbjct: 93 agattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| ||| |||||||||||||| | |||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattga 92
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
||||| |||||||| ||||||||||||||| | | |||||| ||||| |||||||||| |
Sbjct: 75 atctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaa 134
Query: 148 atggaggaagta 159
| ||||| ||||
Sbjct: 135 acggagggagta 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgga 147
|||||||||||||| ||||||||| ||| || | || ||| |||||||||||||||| |
Sbjct: 76 atctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaa 17
Query: 148 atggaggaagtat 160
| ||||| |||||
Sbjct: 16 acggagggagtat 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcattt 44
|||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||| ||||||||| ||||||||||||| |||||| || | ||||||||||| ||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 124 cggaggaagta 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||| ||||| ||||||||| |||| | |||||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatat 83
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||||||||| ||| |||||||||||||||||| ||| ||| |||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattga 85
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacat 51
|||||||||| ||||| ||| ||||||||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
|||||||||||||||||| || ||| | |||||| |||||||||||||||| || ||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 154 gaagtat 160
|||||||
Sbjct: 126 gaagtat 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcattt 44
|||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcattt 44
|||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattt 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||||||||||| || ||||| ||||
Sbjct: 41 atgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 97 cattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaa 156
||||||||| ||||| |||||| || |||||| |||||||||||||||| || |||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 157 gta 159
|||
Sbjct: 7 gta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||| ||||| ||||||||| ||||||||||||||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatatt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatt 43
|||||| ||| || |||||| |||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 123 atgctaaaatgacttacattgtggaa 148
|||||| |||||||||||||||||||
Sbjct: 65 atgctagaatgacttacattgtggaa 90
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 99 ttaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagt 158
||||||||||||| ||| || || |||||||||||||||| |||||| || |||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 159 at 160
||
Sbjct: 122 at 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||||| ||||||||| ||||||||| ||||||||| || ||| |||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattga 59
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 99 ttaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagt 158
||||||||||||| ||| || || ||||||||||||||||||||||| || ||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 159 a 159
|
Sbjct: 5 a 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgactta 138
||||||||||||| |||||||||||||||| || |||||| |||||||||
Sbjct: 55 tctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacatt 142
|||||||| |||||||||||||||| || |||||| |||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 27 taagtcattctagcatttcccacattcatattga 60
||||||||||||||||||| ||||||||||||||
Sbjct: 5 taagtcattctagcatttctcacattcatattga 38
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacat 51
|||||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||| ||| | ||||| ||| |||||||||||| |||||| |||||| ||||
Sbjct: 3 tgtacttccttcgtttcataatataagtcattctaacatttctcacatttatat 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 114 atgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
|||||||| |||||| ||||||||||||| || || ||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 4e-11
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
||||||||| ||||||||| |||| | |||||||||| ||||||||||| | || |||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatat--gaatgtgggaga 123
| |||| || |||||| ||| | | ||||||||||||||| |||| | ||||| | |
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
|||||||| | ||||||||||| || ||||| ||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtg 145
|||||||||||||||| | ||||||||||| |||||| || | |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtg 19
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
||||||||||||||||||| ||||| | |||||| |||||||||||||||| || ||||
Sbjct: 69 attcattaacatcaatatggatgtgaaa-atgctagaatgacttacattgtgaaacggag 11
Query: 154 gaagta 159
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||| ||||| ||||||||| |||||||||||||||||| ||||| |||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgt 61
Query: 64 tgaggaatgt 73
| | ||||||
Sbjct: 62 taatgaatgt 71
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 10 ccctccatttcacaatttaagtcattctagcattt 44
|||||| ||||||||| ||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| ||| ||||||||||||||||||| || ||| |||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
|||| || || ||||| | |||||||||| ||||||| | |||||||| | |||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 126 ctaaaatgacttacatt 142
||| |||||||||||||
Sbjct: 125 ctacaatgacttacatt 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 124/155 (80%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
||||||||| ||||| ||| ||||||||| |||||||| |||||||| | || |||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
|||| || ||||||||| || |||||||| ||||||| |||| ||| || || |||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagtat 160
||| ||||||||||||| || || ||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
||||||||||||||| |||||||| ||| || | |||||||||||| ||||||||||
Sbjct: 34 tatctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtga 93
Query: 147 aatggaggaagta 159
|||||||| ||||
Sbjct: 94 aatggagggagta 106
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcattt 44
||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcattt 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 130 aatgacttacattgtggaatggaggaagtat 160
|||||||||||||||| || |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 84 atctatctagattcattaacatcaatatgaatgtgggagatgcta 128
|||| |||||||||||| |||||||||||||||||||| ||||||
Sbjct: 43 atctgtctagattcattgacatcaatatgaatgtgggaaatgcta 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtggga 121
|||||||||||| ||||||||||||||||||||
Sbjct: 41 tctagattcattgacatcaatatgaatgtggga 9
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttac 139
|||||| | |||||||||||||||||| | |||||||||| |||||| || | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 140 attgtggaatggaggaagtat 160
|||||| || |||||||||||
Sbjct: 24 attgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 95/116 (81%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
|||||||||| ||||| ||| |||| | || ||||||| ||||||||||||| || |
Sbjct: 159 gtactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatc 100
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| |||| || |||||||| | | ||||||||||||||||| |||||||||||||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtggg 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 101/126 (80%)
Strand = Plus / Plus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatattgaagttgaggaatgtana 76
||||| ||| |||| | ||||||| || ||||||||||||| | ||| | |||| || |
Sbjct: 16 tttcataatgtaagactttctagccttgcccacattcatatatatgttaatgaatctaga 75
Query: 77 catatatatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgact 136
|| | |||| | | |||||||||| | ||| ||||||||||||| ||||||||| | ||
Sbjct: 76 cacacatatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtct 135
Query: 137 tacatt 142
||||||
Sbjct: 136 tacatt 141
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 93 gattcattaacatcaatatgaatgtgggagatgctaaaatgactt 137
||||||||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 28 aagtcattctagcatttcccacattcatattga 60
|||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattga 33
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 93 gattcattaacatcaatatgaatgtgggagatgctaaaatga 134
||||||||| ||||||||||||||||||| |||||| |||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 31 tcattctagcatttcccacattcatattga 60
||||||||||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattga 58
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 65.9 bits (33), Expect = 2e-10
Identities = 96/116 (82%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||||||||| ||||| | | |||| | |||||||||| ||||||||||||| || |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 66 agg-aatgtanacatatatatctatctagattcattaacatcaatatgaatgtggg 120
| ||| || ||| || || |||||||||||||||||||| |||||||||||||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtggg 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagt 63
|||||||||||| ||||| | | |||| | |||||||||| ||||||||||||| || ||
Sbjct: 161 tgtactccctccgtttcagattataagactttctagcattgcccacattcatatagatgt 102
Query: 64 tgaggaatgtanacatatatatctatctagattca-ttaacatcaatatgaatgtggg 120
| | |||| || | |||| || | |||||||| | |||||||| |||||||||||||
Sbjct: 101 taatgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtggg 44
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 90 ctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaat 149
|||||||||||| |||||||||||| ||| | ||| || |||||||||||||||| ||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 150 ggaggaagtatg 161
||||| ||||||
Sbjct: 122 ggagggagtatg 133
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattga 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 9 tccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
||||||| ||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 100 taacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||| ||||||||| | |||||||||||||||| |||||| || ||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 9 tccctccatttcacaatttaagtcattctagcatttc 45
||||||| ||||||||| |||||||||||||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttc 44
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
|||||||||||| |||||||| || || || |||||| ||||||||| |||||| || |
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 151 gagg 154
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||||| | ||||||||||| | |||| || | ||||||||||| ||
Sbjct: 75 tctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaa 16
Query: 149 tggaggaagtat 160
|||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||| ||| |||||||||||||||| |||| ||||||| |||||||| | |||| ||
Sbjct: 77 atatgtatttagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatat 136
Query: 142 tgtggaatggaggaagta 159
|||| || ||||| ||||
Sbjct: 137 tgtgaaacggagggagta 154
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||| ||| |||||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacatt 142
|||||||||| ||||||| ||| |||||||| | ||| || |||||||||||||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattc 53
|||||||||| ||| | ||| |||||||||||| ||||| ||||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattc 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||| ||||||||||| || ||| || ||||||||||||| || || ||||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 82 atatctatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacat 141
|||||| ||||||||||||||||| ||| | ||| || | |||||||||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 142 tgtggaatggaggaagtat 160
|||| || ||| |||||||
Sbjct: 22 tgtgaaacggaagaagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 ccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||| ||||||||| ||||||||| || ||||| |||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcata 56
|||| ||||| ||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 109 tatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtat 160
||||||||||| | || ||| |||||||||||||||| || |||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttc 45
|||| ||||| ||||||||| ||||||||||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttc 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||| ||||| ||| | || || ||| ||||||||| |||||| ||
Sbjct: 69 tctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaa 128
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 129 cggaggaagta 139
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||| ||||| ||||||||||||||||||| |||||| |||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattga 39
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 96 tcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggagga 155
||||| |||||||||| |||||| || |||||| ||||||||| ||||| || ||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 156 agtat 160
|||||
Sbjct: 90 agtat 94
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||| ||||| ||||| ||| ||| | |||||||||| ||||||||||| | || |||
Sbjct: 4 gtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatc 106
| |||| || ||| |||||| | ||||||||||||||||||
Sbjct: 64 aatgaatctaaacacatatatatgtctagattcattaacatc 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 68 gaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatgct 127
|||| || |||||||||| | | |||||||||||||||| | ||||||||||| |||||
Sbjct: 96 gaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatgct 37
Query: 128 aaaatgacttacattgtggaatggaggaagta 159
| || | ||| |||| || || ||||||||||
Sbjct: 36 agaaagtcttgcattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 87 tatctagattcattaacatcaatatgaatgtggg 120
|||||||||||||||||||| |||||||||||||
Sbjct: 49 tatctagattcattaacatccatatgaatgtggg 16
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtggg 120
|||||||||||||||||| |||||||||||||
Sbjct: 66 tctagattcattaacatccatatgaatgtggg 97
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||||| ||| |||| | |||||||||| |||||||||||||
Sbjct: 3 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||| ||||||||||||| ||||||||||||| ||||||||| | ||||||| || ||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 149 tggaggaagtat 160
||||| |||||
Sbjct: 132 cggagggagtat 143
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||||| ||| |||| | |||||||||| |||||||||||||
Sbjct: 144 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatat 91
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||| ||||||||||||| ||||||||||||| |||||| || | |||||||| || ||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 149 tggaggaagtat 160
||||| |||||
Sbjct: 15 cggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||| ||| |||| | |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 56
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
||||||||||||| ||||| || || | ||||||||||| ||||||||||| || ||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 154 gaagta 159
||||||
Sbjct: 132 gaagta 137
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacatt 142
|||||||||||||||||| ||||| ||||||| |||||| ||||| |||||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacatt 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||| ||||| ||||| ||| ||||||||||||||||| |||| || |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
||||||||| ||||| ||| ||| ||||||||||||| ||||||| |||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatat 81
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 94 attcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggag 153
||||||||||||| ||||| || || | ||||||||||| ||||||||||| || ||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 154 gaagta 159
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
|||||||||| ||||||||| |||||||||||| |||||| || | |||||||| ||
Sbjct: 77 tatctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatga 18
Query: 147 aatggaggaagtat 160
|||||||| |||||
Sbjct: 17 aatggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||||||| ||| |||| | |||||||||| ||||||||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatat 56
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||||| ||| |||| | |||||||||| |||||||||||||
Sbjct: 142 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatat 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
|||||||||||||||| ||||||||||||| |||||| || | |||||||| || || |
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 151 gaggaagta 159
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
|||||||||||||||| ||||| ||||| | |||||| || | ||||||||||| || |
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 151 gaggaagta 159
|||||||||
Sbjct: 150 gaggaagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 122/154 (79%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagttg 65
|||| ||||| ||||||||| |||| | |||||||||| | ||||| ||||| || |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 66 aggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagatg 125
| |||| || ||| || || | |||| ||||||||||||| | |||||||| || ||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 126 ctaaaatgacttacattgtggaatggaggaagta 159
||||| | |||||||||| || ||||||||||
Sbjct: 38 ttaaaaagtcttacattgtaaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatatt 58
|||| ||||| ||||||||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 107 aatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||||| || ||| ||| |||||||||||| || ||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 12 ctccatttcacaatttaagtcattctagcatttcccacatt 52
|||| ||||||||| |||||||||||||||||||| |||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 130 aatgacttacattgtggaatggaggaagtat 160
|||||||||||||||| || |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 113 aatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||| ||| |||||| |||||||||||||||| || |||| |||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctag 39
|||| ||||| ||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 124/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
||||||||||| ||||| ||| |||| | |||||||||| || | ||||||||||| |||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtt 63
Query: 65 gaggaatgtanacatatatatctatctagattcattaacatcaatatgaatgtgggagat 124
| |||| || ||||| | ||||||||||||||||| |||||||||||| ||
Sbjct: 64 aatgaatctagg--tatatgcgtgtctagattcattaacatttatatgaatgtggacaat 121
Query: 125 gctaaaatgacttacattgtggaatggaggaagta 159
|||| || | |||||||| || || ||||||||||
Sbjct: 122 gctagaaagtcttacattatgaaacggaggaagta 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 90 ctagattcattaacatcaatatgaat 115
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttc 45
||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 123 atgctaaaatgacttacattgtggaatggaggaagta 159
|||||| |||||||||||||||| || ||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 87 tatctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtgg 146
|||||||||||||||| ||| | || ||||||| ||||||||| | |||||||||||
Sbjct: 84 tatctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtga 143
Query: 147 aatggaggaagta 159
|| ||||||||||
Sbjct: 144 aacggaggaagta 156
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||| ||||||||| |||||||||||| |||||| ||| ||||||||| || ||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 149 tggaggaagtat 160
||||| |||||
Sbjct: 127 cggagggagtat 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||| ||| ||||| ||||||||||| ||||||||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatat 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattca 54
|||| ||||| ||||| ||| ||||| ||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||| ||| |||| | |||||||||| |||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 107
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 90 ctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaat 149
|||||||||||| ||| ||||||||||||| |||||| || | |||||||| || ||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 150 ggaggaagta 159
||||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattc 53
|||| ||||| ||||||||| ||||||||||||||| || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 124 tgctaaaatgacttacattgtggaatggaggaagta 159
||||| |||||||||||||||| || ||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||| | |||||||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatat 89
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||| ||||||||| |||||||||||| |||||| || | ||||||||||| ||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 149 tggaggaagta 159
||||| ||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccac 49
|||||||||| ||||| ||| |||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccac 48
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttc 45
|||||||| | ||||| ||| |||||||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttc 107
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||| ||||||||| |||| |||||||||| |||||||||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatat 69
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
||||| ||||| ||||||||| |||| | ||||||| || |||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatat 56
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| |||||||||||| | ||| | |||| || |||| ||| | | ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 94 attcattaacatcaatatgaatgtggg 120
||||||||||||| |||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtggg 95
Score = 54.0 bits (27), Expect = 6e-07
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| ||||||||||||| || ||| | |||| || || | ||| | |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 94 attcattaacatcaatatgaatgtgg 119
|||||||||||| ||||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgg 21
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| |||| |||||||| | ||| | |||| || |||| |||| | ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 94 attcattaacatcaatatgaatgtggg 120
||||||||||||| |||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtggg 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 34 ttctagcatttcccacattcatattgaagttgaggaatgtanacatatatatctatctag 93
|||||||||| ||||||||||||| || ||| | |||| || ||||||| | | ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 94 attcattaacatcaatatgaatgtggg 120
|||||||||||| |||||||| ||||
Sbjct: 46 attcattaacatatatatgaatatggg 20
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||| ||||||||||| ||| |||| | |||||||||| |||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 108 atatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagta 159
||||||||||||| |||||| || | |||||||| || |||||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacatt 142
|||||||||||||||||| ||| |||||||| |||||| || | ||||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacatt 22
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtggg 120
|||||||||||||||||| |||||||||||||
Sbjct: 56 tctagattcattaacatctatatgaatgtggg 87
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 78 atatatatctatctagattcattaacatcaatatgaatgtggg 120
|||||||| | ||||||||||||| |||| |||||||||||||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtggg 99
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcattt 44
|||||||||| ||||||||| ||| ||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcattt 66
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 5 gtactccctccatttcacaatttaagtcattctagcattt 44
||||||||| | ||||||||| ||||||||||||| ||||
Sbjct: 4 gtactcccttcgtttcacaatataagtcattctagtattt 43
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgg 119
|||||||||||||||||| ||||||||||||
Sbjct: 62 tctagattcattaacatctatatgaatgtgg 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 102 acatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaagtatg 161
||||| |||||||||||| |||||| || | |||||||| || || ||||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagtatg 3
Query: 162 ta 163
||
Sbjct: 2 ta 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatattgaagtt 64
|||||||||| ||||| ||| |||| | |||||||||| |||||||||||| || |||
Sbjct: 133 gtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtt 74
Query: 65 gaggaatgtanacatatatat 85
| |||| || |||| |||||
Sbjct: 73 aatgaatctagacatctatat 53
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 82 atatctatctagattcattaacatcaatatgaatgtggg 120
|||| ||||||||||||||||||| |||||||||||||
Sbjct: 43 atatatatctagattcattaacatatatatgaatgtggg 81
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtggg 120
|||||| | ||||||||||||||||| |||||||||||||
Sbjct: 50 atatatatgtctagattcattaacatatatatgaatgtggg 10
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||||||||||||||||| | |||||||| | |||||| || | ||||||||||| ||
Sbjct: 75 tctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaa 16
Query: 149 tggaggaagta 159
||||||||||
Sbjct: 15 cggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 90 ctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaat 149
||||||||||||||||| ||||| ||||||| |||||| || | |||||||| || ||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 150 ggaggaagta 159
||||| ||||
Sbjct: 138 ggagggagta 147
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
||||||||||| ||||| ||| |||| | |||||||||| ||||||| |||||
Sbjct: 148 gtactccctccgtttcataatgtaagactttctagcattgcccacatacatat 96
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtggg 120
|||||||||||||||| |||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggg 93
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||||||||| ||||| ||| |||| | |||||||||| |||| ||||||||
Sbjct: 142 tgtactccctccgtttcataatataagactttctagcattacccatattcatat 89
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 88 atctagattcattaacatcaatatgaat 115
||||||||||||||||||| ||||||||
Sbjct: 76 atctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtggga 121
|||||| | ||||| ||||||| |||||||||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtggga 9
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 80 atatatctatctagattcattaacatcaatatgaatgtggga 121
|||||| | |||||||| |||| |||||||||||||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtggga 108
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatg 150
|||||||| ||||||| | |||||||||| | |||||| || | ||||||||||| || |
Sbjct: 72 tagattcaataacatctaaatgaatgtggca-atgctagaaagtcttacattgtgaaacg 130
Query: 151 gaggaagtat 160
||||||||||
Sbjct: 131 gaggaagtat 140
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtggg 120
|||||||||||||||| |||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggg 93
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 4 tgtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
|||||| ||||| ||||| ||| ||||||||||||||||| | ||||||||||
Sbjct: 138 tgtacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 91 tagattcattaacatcaatatgaatgtggg 120
|||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtggg 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 91 tagattcattaacatcaatatgaatgtggg 120
|||||||||||||||| |||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tactccctccatttcacaatttaagtcattcta 38
|||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 98 attaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaatggaggaag 157
||||| |||||||| |||||| | || ||| |||||||| ||||||| || ||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 158 tat 160
|||
Sbjct: 107 tat 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 6 tactccctccatttcacaatttaagtcattctagcatttcccacattcatattga 60
|||| ||||| ||||||||| |||||||||||| |||| |||||| |||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattga 54
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 17 tttcacaatttaagtcattctagcatttcccacattcatat 57
||||||||| |||| | |||||||||| |||||||||||||
Sbjct: 115 tttcacaatgtaagactttctagcattgcccacattcatat 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 89 tctagattcattaacatcaatatgaatgtgggagatgctaaaatgacttacattgtggaa 148
|||| |||||||| ||| ||||||||||||| |||||| || | ||||||||||| ||
Sbjct: 56 tctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 115
Query: 149 tggaggaagtat 160
||| |||||||
Sbjct: 116 cggatgaagtat 127
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 5 gtactccctccatttcacaatttaagtcattctagcatttcccacattcatat 57
||||| ||||||||||| | | |||| | |||||||||| |||||||||||||
Sbjct: 135 gtactacctccatttcagattataagactttctagcattgcccacattcatat 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 90 ctagattcattaacatcaatatgaatgtggg 120
|||||||| |||||||| |||||||||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtggg 44
