miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 122/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 acatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| |||||||| |||||
Sbjct: 135 ttacattgtgatacgga 151
Score = 111 bits (56), Expect = 3e-24
Identities = 114/132 (86%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 10 acaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaa 68
||||||||||| ||| |||||| ||||||||| |||||||| ||||||||||| | |
Sbjct: 143 acaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagataga 84
Query: 69 tatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccca 128
|||||||||||||||||||||| |||||||| |||||||||||| | ||||||| ||
Sbjct: 83 tatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttaca 24
Query: 129 ttgtgaaacgga 140
||||||||||||
Sbjct: 23 ttgtgaaacgga 12
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 122/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 75 atagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 113 bits (57), Expect = 6e-25
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || || ||||||||| ||||||||| ||||||| |||
Sbjct: 148 gtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgtag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 129 bits (65), Expect = 1e-29
Identities = 121/137 (88%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| ||| |||||| |||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 75 -cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgac 133
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 134 ttacattgtgaaacgga 150
Score = 113 bits (57), Expect = 6e-25
Identities = 119/137 (86%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| ||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaa 88
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| || ||| || ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 87 acatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 120/137 (87%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatat-tgatggaatgaatctag 63
|||| ||||||||||| ||| |||||| || |||||| |||| | | |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 2e-15
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| ||||||||| |||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 75 acatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 129 bits (65), Expect = 1e-29
Identities = 121/137 (88%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||||||||||||||||||| ||| | ||||||||| |||||||| |||||||||||
Sbjct: 15 gttttacaatgtaagttattctagttt-tcccacattcatattgatattaatgaatctag 73
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||
Sbjct: 74 atagatatatatgtctagattcattaacatcaatatgaatgtggaaaatattagaatgac 133
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 134 ttacattgtgaaacgga 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 117/137 (85%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || || | ||||||| ||||||||| |||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctag 88
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | ||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 87 acatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actagaataac 29
Query: 124 tcccattgtgaaacgga 140
| |||||| |||||||
Sbjct: 28 ttacattgtaaaacgga 12
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 120/137 (87%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|||||||||||| |||||||||||| |||||||||||| ||| |||| |||||||||
Sbjct: 88 ataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 113 bits (57), Expect = 6e-25
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | ||| ||| ||||||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctat 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 75 acatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 120/137 (87%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | |||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 75 atagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| ||| || ||||||||| |||||| || |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| ||||||||| |||||| |||| |||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 119/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| |||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct: 88 acatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||| | || |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||||||||||||||||||| ||||||||| ||||| ||||| || ||||||
Sbjct: 75 acggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 119/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||||||| || ||||||||| |||||||||| |||||||||||
Sbjct: 148 gtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||| | |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 88 aaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 97.6 bits (49), Expect = 4e-20
Identities = 116/137 (84%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||| | |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||||| ||||||||||||| |||||||| |||||||||||| || ||||||
Sbjct: 75 atagatatatatttctagattcattaccatcaatattaatgtgggaaattctaaaatgac 134
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 135 ttagattgtgaaacgga 151
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 119/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| ||| || | |||||| |||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 113 bits (57), Expect = 6e-25
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| ||||||||| |||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 75 acatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 119/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | | ||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| | ||||||| |||||||| ||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatctaa 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| |||| |||||||||||||||| |||||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 119/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| |||||||||| ||||||||| ||||| ||| |||||||||||
Sbjct: 148 gtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| |||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| || |||||||||||||||||| || ||||||
Sbjct: 75 acatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgac 134
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 135 ttatattgtgaaacgga 151
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
| ||||||| || ||||||||||||||
Sbjct: 124 actagaatgtcttacattgtgaaacgga 151
Score = 65.9 bits (33), Expect = 1e-10
Identities = 112/137 (81%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| |||||||||| ||| ||| || ||||||||| |||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| |||||||| | | ||||| |||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatttctagtgaaaatactagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 113/130 (86%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| | ||| ||||||||| |||||||||| ||||||||||| || |||
Sbjct: 141 aatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctagacatata 82
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
||| | |||||||||||||| | ||||||||||||||||||| |||||||||| ||||
Sbjct: 81 tatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 113 bits (57), Expect = 6e-25
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| |||||| || |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||
Sbjct: 75 atagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgac 134
Query: 124 tcccattgtgaaacgga 140
| |||| |||||||||
Sbjct: 135 ttacattatgaaacgga 151
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | ||||||| ||||| || ||| ||| |||
Sbjct: 15 gtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaatttag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 75 ctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 116/137 (84%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | ||| ||| |||||||| ||||||||||||| |||| || ||||||
Sbjct: 88 acatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctataatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| |||||||||| ||||||||| ||||| || |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| || ||||||||||||| ||| |||||||||
Sbjct: 75 atagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||| ||||| ||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||||||||||| | |||||||||||||||||| || ||||||
Sbjct: 88 acatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
|||||||||| |||||||||||||
Sbjct: 124 gctagaatgacttatattgtgaaacgga 151
Score = 81.8 bits (41), Expect = 2e-15
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| |||||| ||||||||| |||||||| |||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||| | |||||||||||||| || ||||||||||||| ||| |||||||||
Sbjct: 88 atatatatatttatctagattcattaacattaatatgaatgtggaaaaagttagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 28 ttatattgtgaaacgga 12
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 105/121 (86%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| |||||||||||||||| || |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | | |||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgac 134
Query: 124 t 124
|
Sbjct: 135 t 135
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
||||||||||||||||||||||| | |||||| |||||||||||| |||||||||| |
Sbjct: 84 atatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttac 25
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 24 attgtgaaacgga 12
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| || |||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||||||||| |||||| | | |||| |||||||||
Sbjct: 75 atagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || |||||| | |||||||||||||| ||||||||||||||| |||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaat 40
Query: 113 aatagaatgactcccattgtgaaacgga 140
|||||||||| ||||||||||||||
Sbjct: 39 ggtagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 105 bits (53), Expect = 2e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 17 aagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaatatatat 75
|||| ||| |||||| || |||||| ||||||||| ||||||||||| | ||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 109
Score = 97.6 bits (49), Expect = 4e-20
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 17 aagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaatatatat 75
|||| ||| |||||| ||||||||| ||||||||| ||||||||||| || |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||| ||||||||||||||| ||||| ||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgact 2
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| |||| ||| |||| |||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||
Sbjct: 75 ttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 81.8 bits (41), Expect = 2e-15
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| || |||||| ||||| ||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| ||||||||||||| ||| |||||||| |||| ||| |||||||||
Sbjct: 88 acatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| |||||||| || ||| |||||| ||||||| |||| |||| |||||||||||
Sbjct: 15 gtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| ||||||| ||||||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 75 gcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | ||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||| |||||||||||| ||| |||||||||||| ||| |||||||||
Sbjct: 88 acttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
||||||||||||||
Sbjct: 28 atacattgtgaaacgga 12
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 114/132 (86%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 10 acaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaa 68
||||||||||| ||| |||||| ||||||||| ||||||||| ||||||||||| ||
Sbjct: 141 acaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagaca-- 84
Query: 69 tatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccca 128
|||||||||||| ||||||||| |||||||||||||| | |||| |||||||||| ||
Sbjct: 83 tatatatgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttaca 24
Query: 129 ttgtgaaacgga 140
||||| ||||||
Sbjct: 23 ttgtggaacgga 12
Score = 105 bits (53), Expect = 2e-22
Identities = 114/132 (86%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 10 acaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaa 68
||||||||||| ||| |||||| | | ||||| ||||||||| ||||||| ||| ||
Sbjct: 20 acaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagaca-- 77
Query: 69 tatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccca 128
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||
Sbjct: 78 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 137
Query: 129 ttgtgaaacgga 140
||||| ||||||
Sbjct: 138 ttgtggaacgga 149
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| | ||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||
Sbjct: 88 acatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 28 ttatattgtgaaacgga 12
Score = 105 bits (53), Expect = 2e-22
Identities = 117/137 (85%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| |||||| || |||||| |||||||| |||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 75 atagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 105 bits (53), Expect = 2e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 17 aagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaatatatat 75
|||| ||| |||||| ||||||||| ||||||||| |||||||||| | ||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 2
Score = 97.6 bits (49), Expect = 4e-20
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 17 aagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaatatatat 75
|||| ||| |||||| ||||||||| ||||||||| ||||||||||| || |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
| |||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgact 109
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| |||| |||||| |||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 148 gtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
| | |||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 88 atagaaatatatgtctagattcataaacatcaatataaatgtgggaaat 40
Score = 97.6 bits (49), Expect = 4e-20
Identities = 116/137 (84%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgga-atgaatctag 63
|||| |||| |||||| ||||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 15 gtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||| | | |||||||||||||| |||||||| |||||||||||| || ||||||
Sbjct: 75 acatatatttctatctagattcattaacatcaatataaatgtgggaaatgctaaaatgac 134
Query: 124 tcccattgtgaaacgga 140
| | ||||||||||||
Sbjct: 135 ttactttgtgaaacgga 151
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 6e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 69 tatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccca 128
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 129 ttgtgaaacgga 140
||||||||||||
Sbjct: 23 ttgtgaaacgga 12
Score = 58.0 bits (29), Expect = 3e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatata 72
|| |||||
Sbjct: 75 acatatata 83
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 103 bits (52), Expect = 6e-22
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 68 aatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaat 127
Query: 113 aatagaatgactcccattgtgaaacgga 140
|||||||||| ||||||||||||||
Sbjct: 128 gctagaatgacttacattgtgaaacgga 155
Score = 79.8 bits (40), Expect = 9e-15
Identities = 117/141 (82%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 152 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 93
Query: 64 tcaaatatatatgtctagattcattaatatca----atatgaatgtgggaaataatagaa 119
|| |||||| | |||||||||||||| |||| ||||||| || ||||| |||||
Sbjct: 92 acatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgctagaa 33
Query: 120 tgactcccattgtgaaacgga 140
||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 103 bits (52), Expect = 6e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 69 tatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccca 128
||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 129 ttgtgaaacgga 140
||||||||||||
Sbjct: 117 ttgtgaaacgga 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||||||| |||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| ||| |||||| ||||||||| |||||
Sbjct: 125 gtttcacaatgtaagtcattctagcatttcccacattcatatt 83
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 116/137 (84%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| || |||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||| |||||||||||||| || |||||||||||||| || || |||||||||
Sbjct: 88 acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 97.6 bits (49), Expect = 4e-20
Identities = 117/138 (84%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattga--tggaatgaatcta 62
|||| ||||||||||| ||| |||||| || |||||| ||||||| | | ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgn-tgaatcta 73
Query: 63 gtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatga 122
| || | ||||||||||||||||||| | ||||||||||||||| ||||| ||||||||
Sbjct: 74 gacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatga 133
Query: 123 ctcccattgtgaaacgga 140
|| ||||||||||||||
Sbjct: 134 cttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 101 bits (51), Expect = 2e-21
Identities = 111/130 (85%), Gaps = 7/130 (5%)
Strand = Plus / Minus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| |||||| ||||||||| ||||||||| ||||||||||| || ||
Sbjct: 135 aatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctagacagat- 77
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||
Sbjct: 76 -----gtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacatt 22
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 83.8 bits (42), Expect = 6e-16
Identities = 114/137 (83%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| | |||||||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 75 aca------tctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgac 128
Query: 124 tcccattgtgaaacgga 140
| |||| |||||||||
Sbjct: 129 ttacattatgaaacgga 145
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 117/137 (85%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| || ||||||||||||||| ||| ||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| |||||||||||| |||||||| | |||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 1e-13
Identities = 114/137 (83%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| ||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | | |||||| ||||| |||||||| ||||| ||||| |||||||||
Sbjct: 75 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 132
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 133 ttacattgtgaaacgga 149
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
|||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 117/137 (85%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| || ||||||||||||||| ||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 72
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||||||||||||| |||||||||||| |||||||| | |||||||
Sbjct: 73 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 132
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 133 ttacattgtgaaacgga 149
Score = 75.8 bits (38), Expect = 1e-13
Identities = 114/137 (83%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| ||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 146 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 87
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | | |||||| ||||| |||||||| ||||| ||||| |||||||||
Sbjct: 86 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 116/137 (84%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|||||||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct: 75 ------atatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgac 128
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 129 ttatattgtgaaacgga 145
Score = 83.8 bits (42), Expect = 6e-16
Identities = 114/137 (83%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| |||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 142 gtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatctag 83
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||| |||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 82 acatatat------ctagattcattagcatcaatatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 115/137 (83%), Gaps = 10/137 (7%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 80
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 79 a---------atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 89.7 bits (45), Expect = 9e-18
Identities = 114/137 (83%), Gaps = 10/137 (7%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 75 acat---------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 125
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 126 ttacattgtgaaacgga 142
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 99 aatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 113 aatagaatgactcccattgtgaaacgga 140
| ||||| |||| |||| |||||||||
Sbjct: 39 actagaaagacttacattatgaaacgga 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaat 103
||||||||||| || |||||| |||||||||||||||| ||| ||||||||
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 93.7 bits (47), Expect = 6e-19
Identities = 112/131 (85%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 11 caatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaat 69
|||||||||| ||| |||||| || |||||| |||||||||| ||||||||||| | |
Sbjct: 21 caatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctagataga- 79
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
|||||| |||||||||||||| || ||||| ||| |||||||| |||||||||| |||
Sbjct: 80 atatatatctagattcattaacattaatataaatatgggaaatgttagaatgacttacat 139
Query: 130 tgtgaaacgga 140
|||||||||||
Sbjct: 140 tgtgaaacgga 150
Score = 73.8 bits (37), Expect = 6e-13
Identities = 114/137 (83%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| || ||| ||||| ||||||||| ||| |||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctag 88
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||| | | ||||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 87 atatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||| ||||||||
Sbjct: 28 ttacattgcgaaacgga 12
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 116/137 (84%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| |||||| |||||| |||||||||||| ||||||||| |
Sbjct: 146 gtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctgg 87
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| || ||| ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 86 acatatgcctat--ctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 83.8 bits (42), Expect = 6e-16
Identities = 115/137 (83%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| | ||||||| ||||||||||| |||||||| || ||||||||| |||||||||
Sbjct: 75 --ataggcatatgtccagattcattaacatcaatataaacgtgggaaatgctagaatgac 132
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 133 ttatattgtgaaacgga 149
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 67 aatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcc 126
|||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||
Sbjct: 85 aatatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgactta 26
Query: 127 cattgtgaaacgga 140
||||||||||||||
Sbjct: 25 cattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 2e-15
Identities = 112/136 (82%), Gaps = 11/136 (8%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||||||||| ||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| ||||||| ||||||||||||||||||||| |||||||||
Sbjct: 75 acatatatat----------tcattaacatcaatatgaatgtgggaaatgctagaatgac 124
Query: 124 tcccattgtgaaacgg 139
| |||||||||||||
Sbjct: 125 ttacattgtgaaacgg 140
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 92/106 (86%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 36 cacatttatattgatgg-aatgaatctagtcaaatatatatgtctagattcattaatatc 94
|||||||||||||||| ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 117 cacatttatattgatgataatgaatctagacatatatatctatctagattcattaacata 58
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||| || ||||||| |||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctacaatgacttatattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 2e-15
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| |||||| ||||||||| ||||| ||| |||||||||||
Sbjct: 15 gtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||||||||||||||||||| |||||||| |||||| |||| ||||||| |
Sbjct: 75 atagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggc 134
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 135 ttatattgtgaaacgga 151
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
|||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| || ||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaa 102
|||||||||||||| |||||||||||
Sbjct: 80 tctagattcattaacatcaatatgaa 105
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
|||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 100 tgaaacgga 108
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgga-atgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| |||| |||| |||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatctaa 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||| ||||||||||||||||| ||| ||||||||||| ||||| ||| ||||||
Sbjct: 88 atatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgac 29
Query: 124 tcccattgtgaaacgga 140
| || |||||||||||
Sbjct: 28 ttacaatgtgaaacgga 12
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||| ||||||| |||||| ||| || |||||| |||| |||| |||||||||||
Sbjct: 15 gtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| ||||||| | ||||||||| || ||| ||||||||||||||||| |||||||||
Sbjct: 75 acatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | || |||| ||||||||| ||||||| |||
Sbjct: 148 gtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatatag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| ||||| | |||||||||||||| |||||||||||| | |||||| |||||||||
Sbjct: 88 acatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 89.7 bits (45), Expect = 9e-18
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| ||| | ||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||| ||||||| ||||||||| ||||||||||||| || | || |||||||||
Sbjct: 75 atagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 135 ttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 54.0 bits (27), Expect = 5e-07
Identities = 111/137 (81%), Gaps = 4/137 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| ||| || ||||||||| |||||||| |||||||||||
Sbjct: 15 gtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||| |||||||| |||| ||||||||||||||||||||| | |||||||
Sbjct: 75 atagatata---gtctagatccattggcatcaatatgaatgtgggaaatggtggaatgac 131
Query: 124 tcccattgtgaaacgga 140
| |||| |||||||||
Sbjct: 132 ttacattatgaaacgga 148
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 137 cgga 140
||||
Sbjct: 126 cgga 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 90 atatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 62 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| || ||| ||||||||| ||||||||| |||||||||||
Sbjct: 126 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 67
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| ||||| ||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 87 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| || |||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
|||||||||||||| |||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 130 tgtgaaacgga 140
| |||||||||
Sbjct: 112 tatgaaacgga 122
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
|||||||||||||||||||| || |||||||||||||||||| |||||||||| |||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 130 tgtgaaacgga 140
|||||||||||
Sbjct: 113 tgtgaaacgga 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| ||| |||||| ||||||||| |||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatat 46
|||| ||||||||||||||| |||||| || |||||| ||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
|||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 130 tgtgaaacgga 140
| |||||||||
Sbjct: 22 tatgaaacgga 12
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 135 aacgga 140
||||||
Sbjct: 127 aacgga 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 70
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 135 aacgga 140
||||||
Sbjct: 17 aacgga 12
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 80 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 128
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 74
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 109/130 (83%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| || ||| ||||||||| |||| | || ||||||||||| | |||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
|| ||||||||||||||||| | | |||||||||||| |||| |||||||||| ||||
Sbjct: 82 tagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 142 gtgaaacgga 151
Score = 81.8 bits (41), Expect = 2e-15
Identities = 102/121 (84%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | ||||||| |||| | || |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| ||||||| |||||||||||||| | | ||||||||||||||||| |||||||||
Sbjct: 88 acatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgac 29
Query: 124 t 124
|
Sbjct: 28 t 28
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 135 aacgga 140
||||||
Sbjct: 17 aacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 83 ttcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 83 ttcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacgga 144
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||||| ||||||||||||||| |||||| || ||||||| ||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 135 aacgga 140
||||||
Sbjct: 135 aacgga 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||||||| || || |||||| ||||||||| |||||||||||
Sbjct: 137 gtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatctag 78
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 73 tatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgt 132
||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 133 gaaac 137
|||||
Sbjct: 132 gaaac 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||||||||| |||||||||||||||| |||| |||||||||| |||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 139 ga 140
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| ||| |||||| | | | ||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctag 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| | |||||| ||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 88 acatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 2e-15
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | ||||||| |||||||| ||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactctag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||||||||||||||||||||| |||||||||||| | | |||| |||||||||
Sbjct: 75 atagatatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgac 134
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 135 ttatattgtgaaacgga 151
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
||||||||||||||||||||||| |||||||||||| || ||||| |||||||||| |
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttac 25
Query: 128 attgtgaaacgga 140
||| |||||||||
Sbjct: 24 attatgaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 97 tatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacgga 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| |||||| || || ||| ||||||||| ||||||||||| || |||
Sbjct: 22 aatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctagacatata 81
Query: 71 tatatgtctagatt 84
||| | ||||||||
Sbjct: 82 tatctatctagatt 95
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
|||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 125 tgaaacgga 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 86 attaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||| || |||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| ||| |||||| ||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||| ||||||||||||||| ||||| |||||||| | ||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 139 ga 140
||
Sbjct: 138 ga 139
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
||||||||||||||||||||| ||| ||| |||| || ||||||| ||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 139 ga 140
||
Sbjct: 138 ga 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| || |||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct: 99 aatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaat 40
Query: 113 aatagaatgactcccattgtgaaacgga 140
|||||||||| |||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacgga 12
Score = 75.8 bits (38), Expect = 1e-13
Identities = 108/130 (83%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| |||||| | ||||||| |||| |||| ||||||||||| || |||
Sbjct: 22 aatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctagacatata 81
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
||| | ||||||||||||| ||| ||||| ||||| ||||| |||||||||| ||||
Sbjct: 82 tatttatctagattcattagcatcgatatggatgtgaaaaatactagaatgacttacatt 141
Query: 131 gtgaaacgga 140
|||||||||
Sbjct: 142 atgaaacgga 151
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 137 cgga 140
||||
Sbjct: 125 cgga 128
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||| |||| |||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| |||||||||||||||| |||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| | ||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 101 aatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| |||||||||| ||||| |||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacgga 127
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| |||||||||||| |||||||| |||||||||| |||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 137 cgga 140
||||
Sbjct: 130 cgga 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| ||| |||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgga 119
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| ||| ||||| ||||||||
Sbjct: 116 gtttcacaatgtaagtcattctagcatttccaacattcatattgat 71
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
||||||||||||||||||||| ||| ||||||||||||| |||| ||||| | || |||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacat 140
Query: 130 tgtgaaacgga 140
|||||||||||
Sbjct: 141 tgtgaaacgga 151
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || |||| |||||| ||||||||| ||| |||||||| |||| | |
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagt 40
Query: 113 aatagaatgactcccattgtgaaacgga 140
| ||||| | || ||||||||||||||
Sbjct: 39 actagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 67 aatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcc 126
||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 64 aatatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgactta 123
Query: 127 cattgtgaaac 137
|||| ||||||
Sbjct: 124 cattatgaaac 134
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
||||||||||||||||||||| |||||||||||| |||||||| || ||||||| ||
Sbjct: 72 atatatgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatat 131
Query: 130 tgtgaaacgga 140
|||||||||||
Sbjct: 132 tgtgaaacgga 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 80/94 (85%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||| ||||| |||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 139 gtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatctag 80
Query: 64 tcaaatatatatgtctagattcattaatatcaat 97
|| |||| ||| ||||||||||||| ||||||
Sbjct: 79 acatatatctat--ctagattcattaacatcaat 48
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
|||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 3 ctgttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||||| ||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 122 ctgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 74
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
|||||||||||||||||| | || |||||||||||| ||||| |||||||||| ||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 122 gtgaaacgga 131
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| || |||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 108/130 (83%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| |||||| | ||||||| |||| |||| ||||||||||| || |||
Sbjct: 22 aatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctagacatata 81
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
||| | ||||||||||||| ||||||||| ||||| |||| |||||||||| ||||
Sbjct: 82 tatctatctagattcattagcatcaatatggatgtgaacaatagtagaatgacttacatt 141
Query: 131 gtgaaacgga 140
|||||||||
Sbjct: 142 atgaaacgga 151
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| | ||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaat 40
Query: 113 aatagaatgactcccattgtgaaacgga 140
|||||||||| |||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 139 ga 140
||
Sbjct: 13 ga 12
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||||||||| |||| ||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatagatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatat 46
|||| ||||||||||| ||| |||||| ||||||||| ||||
Sbjct: 114 gtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||| || || ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 135 aacgga 140
||||||
Sbjct: 132 aacgga 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||| || ||||||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 134 gtttcacaatgtaagtcattctagcatttcccacattcatattgatg 88
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 83 ttcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacgga 12
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgact 116
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 26 tagcatctcccacatttatattgatgg-aatgaatctagtcaaatatatatgtctagatt 84
||||||| |||||||| |||| |||| ||||||||||| || |||||||||||||||||
Sbjct: 12 tagcatcacccacattcatatagatgttaatgaatctagacacatatatatgtctagatt 71
Query: 85 cattaatatcaatatgaatgtg 106
|||| | ||| |||||||||||
Sbjct: 72 catttacatctatatgaatgtg 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || |||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 75 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatgtggg 20
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaa 135
||||||||||||||| |||||||||||| ||| |||| |||||||||| |||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 136 acgga 140
|||||
Sbjct: 134 acgga 138
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
|||||| |||||||||||| |||||||||||||||| |||| |||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 125 tgaaacgga 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 86 attaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||| || |||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| ||| |||||| ||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 80 agattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgg 139
|||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 140 a 140
|
Sbjct: 12 a 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 86 attaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||| ||||||||||||||||||||| |||||||||| | ||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacgga 130
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatct 61
|||| ||||||||||| ||| |||||| ||||||||| |||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatct 72
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
|||||||||||| |||||||||| ||| | ||||||||||||||| || ||||||| |
Sbjct: 84 atatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttac 25
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 24 attgtgaaacgga 12
Score = 67.9 bits (34), Expect = 3e-11
Identities = 113/137 (82%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| |||||||||| ||||||||| || | |||| |||||||| ||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||| |||||||||||| ||| ||||||||||| |||| || ||||||
Sbjct: 75 --acatatatatgcatagattcattaacatctatatgaatgtgaaaaatgctaaaatgac 132
Query: 124 tcccattgtgaaacgga 140
| |||| |||||||||
Sbjct: 133 ttgcattatgaaacgga 149
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
||||||||||||||||||| ||| || ||||||||||||||||| |||||||||| |
Sbjct: 79 atatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaatgacttac 138
Query: 128 attgtgaaacgga 140
||| |||||||||
Sbjct: 139 attatgaaacgga 151
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaa 135
|||||||||||||| |||||||||||| ||||||||| |||||||||| |||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 136 acgga 140
|||||
Sbjct: 125 acgga 129
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| || |||||| |||||| ||| ||||||||||||||
Sbjct: 60 atcaatatgaatatgagaaatactagaattacttacattgtgaaacgga 12
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 80 agattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgg 139
|||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 140 a 140
|
Sbjct: 128 a 128
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 84 tcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||| |||||||| ||||| |||||||||| |||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| |||||||||||||| |||||| |||||||||| |||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 137 cgga 140
||||
Sbjct: 113 cgga 116
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||||||||| || ||||||| |||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 50.1 bits (25), Expect = 8e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
||||||||| |||||| ||| ||||||||| ||||||||| |||||||||||
Sbjct: 22 aatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||| |||||||||||| | | |||| ||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgact 123
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
||||||| |||||| |||||||||||||||| |||| |||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
||||| |||||| ||||||||||||||||||||| |||||||||| ||||||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 139 ga 140
||
Sbjct: 138 ga 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| | ||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||||||||| || ||||||| |||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 137 cgga 140
||||
Sbjct: 136 cgga 139
Score = 50.1 bits (25), Expect = 8e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
||||||||| |||||| ||| ||||||||| ||||||||| |||||||||||
Sbjct: 129 aatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 77
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||| |||||||||||| | | |||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgact 28
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||| ||| |||||||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 89 aatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattgat 60
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| |||||||||| ||||||||| |||||||||
Sbjct: 124 gtttcacaatgtaagtcattttagcatttcccacattcatattgatg 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||||| |||| | ||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattttggcattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 69 tatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccca 128
|||| ||||||||||| ||||| |||||||||||| |||||||| || ||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 129 ttgtgaaacgga 140
||||||||||||
Sbjct: 118 ttgtgaaacgga 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 99 tgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 137 cgga 140
||||
Sbjct: 117 cgga 120
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 78 ctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
|||||||||||| ||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 138 gga 140
|||
Sbjct: 14 gga 12
Score = 63.9 bits (32), Expect = 5e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttat-tttagcatctcccacatttatattgatg 51
|||| ||||||||||| || |||||||| ||||||||| |||||||||
Sbjct: 133 gtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 86
Score = 44.1 bits (22), Expect = 5e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataataga-atgactcccattgtgaaacgga 140
||||||||||||||||||||| || | |||||| ||||||||||||||
Sbjct: 87 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgga 136
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||||||||| ||||||||||||||| ||||| ||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgact 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||| ||||||||||||||| ||||| ||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgact 7
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 90 atatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 62 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
||||||||||||| || |||||||||||||||||| |||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 137 cgga 140
||||
Sbjct: 122 cgga 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| ||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
|||||| |||||||||||||| |||||||||||||||| |||| |||| ||||| |||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 130 tgtgaaacgga 140
||||||||||
Sbjct: 113 ggtgaaacgga 123
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
||||||||||||||||||||| ||| |||||||| |||| |||| ||||| | || |||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 130 tgtgaaacgga 140
|||||||||||
Sbjct: 141 tgtgaaacgga 151
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacgga 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 98 atgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||| ||||| |||||||||
Sbjct: 104 gtttcacaatgtaagtcattctagcatttcctacattcatattgatg 58
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 78 ctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
|||||||||||| ||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 138 gga 140
|||
Sbjct: 134 gga 136
Score = 63.9 bits (32), Expect = 5e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 133 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttat-tttagcatctcccacatttatattgatg 51
|||| ||||||||||| || |||||||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataataga-atgactcccattgtgaaacgga 140
||||||||||||||||||||| || | |||||| ||||||||||||||
Sbjct: 61 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccat 129
||||| ||||||||||||||||||| ||||| || |||| |||| |||||||||| |||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 130 tgtgaaacgga 140
| |||||||||
Sbjct: 22 tatgaaacgga 12
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 90 atatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 75 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 125
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
||||||||||||| || |||||||||||||||||| |||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| ||||||||| ||||||||
Sbjct: 122 gtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 74 atgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtg 133
|||| |||||||||||| |||||||||||||||||| || |||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 134 aaacgga 140
|||||||
Sbjct: 119 aaacgga 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||| |||| |||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| | ||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
|||||||||||||||||||| ||| ||||||||||||| ||| ||||| |||| ||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 131 gtgaaacgga 140
|||||||||
Sbjct: 21 atgaaacgga 12
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 113/137 (82%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | |||||| ||| | ||| |||||||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctag 87
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| ||||||||||||| ||||||||| || | |||||||||||||||| ||||||||
Sbjct: 86 --atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 28 ttatattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
|||||||| |||||||||||||| || | |||||||||| |||| |||||||||| |
Sbjct: 77 atatatatatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttac 136
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 137 attgtgaaacgga 149
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||||||||| |||||||||||||||| |||| |||||||||| |||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 139 ga 140
||
Sbjct: 13 ga 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 83 ttcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
|||||||| ||||||||||||||| ||||| |||||||||| |||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| || |||||| |||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttctcacattcatattgatg 93
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
||||||||||||||||||||||||| || ||||| |||||||||| |||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 139 ga 140
||
Sbjct: 118 ga 119
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 107/130 (82%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| |||||||||| |||||||| |||| ||||| |||||||||| || ||
Sbjct: 141 aatgtaagtcattttagcattgcccacattcatatagatggtaatgaatctaaacatatg 82
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
| ||| |||||||||||||| ||| ||||| || |||| || |||||||||| ||||
Sbjct: 81 tctatatctagattcattaacatctatatgcatatgggtaaggctagaatgacttacatt 22
Query: 131 gtgaaacgga 140
|||||||||
Sbjct: 21 atgaaacgga 12
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
|||||| ||||||||||| ||| ||||||||||||| ||| || ||||||| ||||
Sbjct: 83 atatgtttagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacatta 142
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 143 tgaaacgga 151
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 112/137 (81%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| |||||||||| || |||||||| ||||||| ||||||| |||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatttag 74
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|||||| ||||||||||||| |||||||| ||||||| |||| || ||||||
Sbjct: 75 ------atatatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgac 128
Query: 124 tcccattgtgaaacgga 140
| |||||||||||||
Sbjct: 129 ttatattgtgaaacgga 145
Score = 60.0 bits (30), Expect = 8e-09
Identities = 111/137 (81%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||| ||||| |||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 142 gtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatctag 83
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
| |||| |||| |||||||| |||||| | |||||| ||||| || ||||||
Sbjct: 82 ------agatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||||||||| |||||||||||||||| ||||| || ||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 139 ga 140
||
Sbjct: 122 ga 123
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||| ||||| | ||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||||||||||||||||||| ||| ||||||||||| | ||| ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgact 109
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaat 6
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaat 111
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
|||||||||| || |||||||| ||| |||||||||||| |||| |||||||||| |
Sbjct: 79 atatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgacttac 138
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 139 attgtgaaacgga 151
Score = 58.0 bits (29), Expect = 3e-08
Identities = 111/137 (81%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctag 63
|||| ||||||||||| ||| |||||| | ||||||| |||| |||| ||||||| ||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaatttaa 89
Query: 64 tcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgac 123
|| |||||| || ||||||||||| ||| |||||||| | | |||| |||||||||
Sbjct: 88 acatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttagaatgac 29
Query: 124 tcccattgtgaaacgga 140
| ||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||| | ||||||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 2
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || ||||||| |||||||||||||| | | |||||||||||||||||
Sbjct: 34 aatgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaat 93
Query: 113 aatagaatg 121
|||||||
Sbjct: 94 gttagaatg 102
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| | ||||| ||||||||||||||||| | | |||||||||||| ||||
Sbjct: 69 aatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaat 10
Query: 113 aatagaatg 121
|||||||
Sbjct: 9 gctagaatg 1
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 84 tcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 87 ttaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||| ||| ||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||||||||| |||| ||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| ||||||||| |||| ||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 74
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaa 119
|||||||||||||||||||||| ||| ||||||||||||| ||| ||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 110
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||||||| |||||||||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaat 41
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 90 atatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 80 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| ||||| ||| ||||||||
Sbjct: 127 gtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||| ||||||||| |||||||||||| ||| |||| |||||||||| ||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 74 atgtctagattcattaatatcaatatgaatgtgggaaataatag 117
||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatgatag 1
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||||||| | |||||||||||||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaat 83
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | |||||||||||||||||||| |||| |||| ||||||||
Sbjct: 99 aatgaatctaggcacacatatatgtctagattcattagtatctatataaatgtggg 44
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||| ||| |||||||||||||| ||||||| |||| |||||||||| ||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 89 aatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||| ||| |||||| | ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatttatattgat 60
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | |||||||| |||||||||| ||||| |||||||||||||
Sbjct: 64 aatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtggg 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
|||||||||| || |||| | |||||||||||||||| || |||||||||||||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtggg 44
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||||||||||||||||||| |||||||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaat 6
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||||||||||||||||||| |||||||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaat 86
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 110/136 (80%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatggaatgaatctagt 64
|||| ||||||||||| ||| |||||| | ||||||| ||||||||| | |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgta-----tctaga 69
Query: 65 caaatatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|| || ||| | |||| | ||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 70 catatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggctagaatgact 129
Query: 125 cccattgtgaaacgga 140
||||||||||||||
Sbjct: 130 tacattgtgaaacgga 145
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||| |||| |||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | ||||||| ||||||||||||| ||| |||||||||||||
Sbjct: 40 aatgaatctaggcatacatatatgcctagattcattaacatctatatgaatgtggg 95
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || |||| |||| ||||||||||||| || |||||||| ||||
Sbjct: 75 aatgaatctaggcatatatgtatgcctagattcattaacatatatatgaatatggg 20
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 73 tatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgt 132
||||| || ||| ||||| |||||||||||||||| ||||| || ||||||| ||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 133 gaaacgga 140
||||||||
Sbjct: 19 gaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||||||| || | ||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagtattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | |||||| |||||||||||||| ||| |||||||||||||
Sbjct: 64 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtggg 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtg 106
||||||||||| | |||| | |||||||||||||||| ||| |||||||||||
Sbjct: 99 aatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || |||||||| |||||||||||||| || |||||||||||||
Sbjct: 75 aatgaatctaggcacatatatatatctagattcattaacatatatatgaatgtggg 20
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| | |||||| || ||||||||||||| ||| |||||||||||||
Sbjct: 40 aatgaatctagatatatatatgtgcctagattcattaacatctatatgaatgtggg 95
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | |||||| |||||||||||||| ||| |||||||||||||
Sbjct: 99 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtggg 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtg 106
||||||||||| | |||| | |||||||||||||||| ||| |||||||||||
Sbjct: 64 aatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| |||||||||||| | | |||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 86 attaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||| |||||||||||||| ||||||| |||||||||| |||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacgga 131
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||||||||| |||| |||||||| || |||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 137 cgga 140
||||
Sbjct: 120 cgga 123
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 86 attaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||| |||||| ||||| |||||||||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacgga 101
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| |||||||||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||| ||||| |||||||| ||| || ||||| |||||||||| ||||||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 137 cgga 140
||||
Sbjct: 135 cgga 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| || || |||||||||||||
Sbjct: 135 gtttcacaatgtaagtcattctagcatttctcatatttatattgatg 89
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 78 ctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
|||||||||||| ||||||||||| ||| |||| ||||||||||| |||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 138 gga 140
|||
Sbjct: 122 gga 124
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| |||||||||||| ||| |||| |||||||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| | ||||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||||| ||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgact 28
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
|||||| || |||||||||||| |||| ||| ||||||||| ||| ||||||||||
Sbjct: 77 atatatgtggctagattcattagtatctataagaatgtgggcaatcctagaatgacttat 136
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 137 attgtgaaacgga 149
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
||||||||||||||||||| |||||||| ||| || ||||| || ||||||| ||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||| |||||||||| || || ||||||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctag 74
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||||| ||| ||||||||||||| ||| ||||| |||| |||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 135 aacgga 140
||||||
Sbjct: 17 aacgga 12
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 106/130 (81%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| |||||| |||| ||| |||| |||| ||||||||||| || | |
Sbjct: 141 aatgtaagtcattctagcattacccatattcatatagatgttaatgaatctagacacaca 82
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
| ||| |||| ||||||||| ||| ||||| ||||||| ||| |||||||||| ||||
Sbjct: 81 tctatatctaaattcattaacatctatatgtatgtgggcaatgctagaatgacttacatt 22
Query: 131 gtgaaacgga 140
|||||||||
Sbjct: 21 atgaaacgga 12
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||||| ||| |||||||| |||| ||| |||||||||| |||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatga 145
Query: 135 aacgga 140
||||||
Sbjct: 146 aacgga 151
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||||||||| ||| |||||||||| || ||| |||||||||| |||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatga 18
Query: 135 aacgga 140
||||||
Sbjct: 17 aacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 105/130 (80%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 12 aatgtaagttattttagcatctcccacatttatattgatgg-aatgaatctagtcaaata 70
||||||||| ||| |||||| || ||||| |||| |||| ||||||||||| || | |
Sbjct: 22 aatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctagacacaca 81
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
| ||| |||| ||||||||| ||| |||| ||||||| ||| |||||||||| ||||
Sbjct: 82 tctatatctaaattcattaacatctatatatatgtgggcaatgctagaatgacttacatt 141
Query: 131 gtgaaacgga 140
|||||||||
Sbjct: 142 atgaaacgga 151
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacgga 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| ||||||| || ||||||||| |||||
Sbjct: 99 gtttcacaatgtaagtcattttagtatttcccacattcatatt 57
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatggaatgaatcta 62
|||| ||||||||||||||| |||||| | ||||||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgatgttatgaatcta 72
Score = 54.0 bits (27), Expect = 5e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 74 atgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtg 133
|||| ||||||||| || |||||||||||||||| |||| |||||| ||| |||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 134 aaacgga 140
|||||||
Sbjct: 18 aaacgga 12
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| ||| |||| |||||||||| ||||||||||||||
Sbjct: 76 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 124
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 84 tcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||| ||| |||||||||||| |||| |||||||||| ||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| ||| |||| |||||||||| ||||||||||||||
Sbjct: 97 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 145
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 80 agattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgg 139
|||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 140 a 140
|
Sbjct: 128 a 128
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
||||||||||||||| ||||| |||||||||| ||| |||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaac 15
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
||||||||||||||||||||||| ||| | |||||||||| ||| ||||| | || |
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 24 attgtgaaacgga 12
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| |||||| || |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtggg 108
|||||||||||||||||||||| ||| |||||||||||||
Sbjct: 79 atatatatgtctagattcattagcatctatatgaatgtggg 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || |||||| ||| ||| |||||||| ||| |||||| ||||||
Sbjct: 99 aatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtggg 44
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||| ||||||||||| |||||||||||| || ||||| ||||||||||
Sbjct: 79 atatatatgtttagattcattagcatcaatatgaatatgagaaatgttagaatgact 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||| || |||||| | |||| |||||||| |||||||||||| ||| ||||
Sbjct: 99 aatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaat 40
Query: 113 aatagaatgact 124
| ||||||||||
Sbjct: 39 actagaatgact 28
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
|||||||||||||||||||||| |||||||||||| || |||| || |||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 113 attgtgaaacgga 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaac 137
||||||||| ||||||| |||||||||| |||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||||||||||||||| || |||||||||||||
Sbjct: 50 atatatatgtctagattcattaacatatatatgaatgtggg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtggg 108
|||||| |||||||||||||| || |||||||||||||
Sbjct: 43 atatatatctagattcattaacatatatatgaatgtggg 81
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgt 105
|||||||||| || | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 99 aatgaatctaaacacacatatatgtctagattcattaacatctatatgaatgt 47
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgg 107
||||||||||| || |||| | ||| |||||||||||| ||| ||||||||||||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtgg 118
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 84 tcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||| |||||||||||||||| |||| || ||||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| |||||||||| | ||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcattttccacattcatattgatg 61
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||| |||||||||||| | ||||||| |||||||||
Sbjct: 118 gtttcacaatgtaatttattttagcattttccacattcatattgatg 72
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||||||||||||||| || |||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtggg 93
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
||||||||||||| ||||| ||| ||||||||||||| ||| ||||| | || |||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 119 tgaaacgga 127
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactccc 127
|||||| | ||||||||||||| |||||||| ||| || |||||| ||||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 128 attgtgaaacgga 140
|||||||||||||
Sbjct: 24 attgtgaaacgga 12
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| || |||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgga 125
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 74 atgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtg 133
|||||||||||||||| |||||||| ||| |||||||| || ||||||| |||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 134 aaacgga 140
||||||
Sbjct: 18 gaacgga 12
Score = 54.0 bits (27), Expect = 5e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 10 acaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
||||||||||| ||| |||||| ||||| ||||||||||||| |||||||||||
Sbjct: 20 acaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatctag 74
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 tcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||||||||| ||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgact 92
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
||||||||||||| ||||||||||||||| |||| |||||| ||| ||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg-gaatgaatctag 63
|||| ||||||||||||||| |||||| | |||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||| | |||||||||| | | |||||||||||||||
Sbjct: 136 gtttcacaatgtaaatcattttagcattttctacatttatattgatg 90
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgg 107
||||||||||||||||||| ||| ||||||||||||
Sbjct: 83 atatgtctagattcattaacatctatatgaatgtgg 118
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || || ||||| ||||| |||||||| ||| |||||||| |||| |||
Sbjct: 99 aatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaat 40
Query: 113 aatagaa 119
| |||||
Sbjct: 39 actagaa 33
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 73 tatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgt 132
|||||||| |||||||| |||| ||||||||||||| ||| ||||| | || ||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 133 gaaacgga 140
||||||||
Sbjct: 112 gaaacgga 119
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | ||||||||||||||||||| ||| |||||||||||||
Sbjct: 43 aatgaatctaggcacacatatatgtctagattcatttgcatctatatgaatgtggg 98
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
|||||||||| || ||||||||||||||||||||| | || |||||||||||||
Sbjct: 99 aatgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaa 102
||||||||||| || |||||| ||| |||||||||| | ||| |||||||
Sbjct: 64 aatgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 97 tatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccatt 130
|||||||||||||||||||| | ||||| ||| | ||||| |||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 131 gtgaaacgga 140
||||||||||
Sbjct: 123 gtgaaacgga 132
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 68 atatatatgtctagattcattaatatcaatatgaatgtgg 107
||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgact 2
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 81 gattcattaatatcaatatgaatgtgggaaataatagaatga 122
||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
||||||||||||| |||||||| ||| || ||||| |||||||||| ||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 137 cgga 140
||||
Sbjct: 15 cgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||| |||||||| |||||||||||||| | |||| |||||||| | ||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 137 cgga 140
||||
Sbjct: 136 cgga 139
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || | |||||| |||||||||||||| ||| || ||||||||||
Sbjct: 64 aatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtggg 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtg 106
||||||||||| | |||| | |||||||||||||||| ||| |||||||||||
Sbjct: 99 aatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 97 tatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 88
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||| | || ||||||||||||||||| ||||| || |||||||||||||
Sbjct: 99 aatgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtggg 44
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgg 107
||||||||||||||||||| ||| ||||||||||||
Sbjct: 80 atatgtctagattcattaacatctatatgaatgtgg 45
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || || ||||| ||||| |||||||| ||| |||||||| |||| |||
Sbjct: 64 aatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaat 123
Query: 113 aatagaa 119
| |||||
Sbjct: 124 actagaa 130
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 73 tatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgt 132
|||||||||||||||||| ||| |||||||| | || ||| |||||||||| |||| |
Sbjct: 79 tatgtctagattcattaacatctatatgaatataggcaatgctagaatgacttacattat 20
Query: 133 gaaacgga 140
||||||||
Sbjct: 19 gaaacgga 12
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || | | |||| |||||||||||||| ||| ||||||||||| | | |
Sbjct: 64 aatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcatt 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
|||||||||| |||| |||||||||
Sbjct: 124 gctagaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || |||||| ||| |||||||||||| ||| | |||||||||||
Sbjct: 99 aatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtggg 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaa 90
|||||||||| || |||||||||||||||||||||||
Sbjct: 64 aatgaatctaaacacatatatatgtctagattcattaa 101
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 93 tcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 107
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| || ||||||||| ||| |||| ||||| |||| ||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 137 cgga 140
||||
Sbjct: 124 cgga 127
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| |||| ||||||||||| |||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| |||||||||| || || |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatg 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||| ||||| |||||||||| || || |||||||||||||
Sbjct: 112 gtttcacaatataagtcattttagcatttctcatatttatattgatg 66
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||||||| |||||| | ||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacaattatattgatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||||||||| |||||||| | ||||| |||| |||||| ||| ||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 139 ga 140
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 74 atgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtg 133
|||||||||||||||| ||| ||||||||||||| ||| ||||| | || |||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 134 aaacgga 140
|||||||
Sbjct: 145 aaacgga 151
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 54.0 bits (27), Expect = 5e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 91 tatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||| |||| |||||| ||| ||||||||||||||
Sbjct: 69 tatcaatatgaatgtggnaaatgctagaataacttacattgtgaaacgga 118
Score = 54.0 bits (27), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||||||| |||||| | ||||||| ||||||||
Sbjct: 115 gtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 91 tatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||| |||| |||||| ||| ||||||||||||||
Sbjct: 61 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||||||| |||||| | ||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||||||||| ||||| ||| |||||| || ||||||||||||||||
Sbjct: 83 gttttacaatataagtcattctagcatttctcacatttatattgatg 37
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgg 107
||||||||||| || | ||| ||||||||||||||||| || ||||||||||||
Sbjct: 75 aatgaatctaggcacacatacatgtctagattcattaacatatatatgaatgtgg 21
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||||||||| || ||| | || ||||||||||||| ||| |||||||||||||
Sbjct: 40 aatgaatctagacatgtatgtgtgcctagattcattaacatctatatgaatgtggg 95
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| |||||||||| ||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||| || ||||||| ||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 83 ttcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||| |||| ||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacgga 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||| ||||| ||| |||||| ||||||||||||| |||||
Sbjct: 111 gtttcacaatctaagtcattctagcatttcccacatttatactgatg 65
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 74 atgtctagattcattaatatcaatatgaatgtggg 108
||||||||||||||||| ||| |||||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtggg 87
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 66 aaatatatatgtctagattcattaatatcaatatgaatgtggg 108
||||| ||||||||||||||||||| ||| | |||||||||||
Sbjct: 86 aaatacatatgtctagattcattaacatctaaatgaatgtggg 44
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaac 137
||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 3 ctgttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||||| ||||||||||| ||| ||||| ||||||||| ||||||||
Sbjct: 115 ctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtggg 108
|||||||||||||||| ||| |||||||||||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtggg 97
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 72 atatgtctagattcattaatatcaatatgaatgtggg 108
|||| |||||||||||||| ||| |||||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtggg 16
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 91 tatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||| |||| |||||| ||| ||||||||||||||
Sbjct: 61 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||||||| |||||| | ||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 91 tatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||| |||| |||||| ||| ||||||||||||||
Sbjct: 69 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgat 50
|||| ||||||||||||||| |||||| | ||||||| ||||||||
Sbjct: 115 gtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatat 46
|||| ||||||||||| ||||||| || ||||||||||||||
Sbjct: 15 gtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||||||||| | ||| |||| || ||||||| ||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 137 cgga 140
||||
Sbjct: 120 cgga 123
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 112
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| |||||||| |||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||| ||||| |||||||| | ||||| |||| |||||||||| ||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 139 ga 140
||
Sbjct: 131 ga 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattgatg 51
|||| ||||||||||| ||| |||||| | ||||| |||||||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcattttccacaattatattgatg 83
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 79 tagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
||||||||||||||||||||| || || ||||| |||||||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 139 ga 140
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatat 46
|||| ||||||||||| ||| |||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatat 46
|||| ||||||||||| ||| |||||| ||||||||||||||
Sbjct: 96 gtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||| |||||||||||| |||||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttata 45
|||| ||||||||||| ||| |||||| |||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgg 139
|||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 101 aatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| |||||||||| ||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacgga 142
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 71 tatatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
|||||||||||||||| ||| ||| ||| |||||||| |||| ||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgact 115
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||| ||||| || ||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtgaaaaatactataatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatattga 49
|||| ||||||||||| ||| |||||| |||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 93 tcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||| || ||||||||| |||||||||| ||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 92 atcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||||||||||||| || ||||||| |||| |||||||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaacgga 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgact 124
||||||||||||| |||| ||||||||||| |||| ||||||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgact 28
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 8e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||| || ||| |||||| |||||||||||| ||| | ||||||||||| |||
Sbjct: 99 aatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaat 40
Query: 113 aatagaatgactcccattgtgaaac 137
||||| | || |||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaac 15
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
|||| |||||||||||||| ||| ||||||||||| | | | |||||||||| ||||
Sbjct: 80 atatatctagattcattaacatccatatgaatgtgagcattgctagaatgacttacatta 21
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| ||| |||||||| | || ||| |||||||||| |||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 137 cgga 140
||||
Sbjct: 148 cgga 151
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 72 atatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattg 131
||||||||||||||||||| ||| | |||||| |||| ||| ||||| | || |||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattg 21
Query: 132 tgaaacgga 140
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || || ||| | | |||||||||||| ||| ||||| | ||||| |||
Sbjct: 64 aatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaat 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
| ||||| | || ||||||||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 96 atatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||| |||||| |||||||||| |||||| |||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 77 tctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaa 136
|||||||||||||| |||||||| | ||| |||| |||||||||| ||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 137 cgga 140
||||
Sbjct: 120 cgga 123
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacg 138
|||||||| ||||||||||||||||||||| || ||||||| ||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 72 atatgtctagattcattaatatcaatatgaatgtggg 108
|||| |||||||||||||| ||| |||||||||||||
Sbjct: 84 atatatctagattcattaacatctatatgaatgtggg 120
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || || ||| ||| |||||||||||| || ||||| ||||||| |||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaat 40
Query: 113 aatagaatgactcccattgtgaaacgga 140
||||| | || ||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||| || ||| |||||||||||||||||| ||| | |||||| |||| |||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaat 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
||||| | || ||||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 73 tatgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgt 132
|||||||||||| ||||| ||| |||||||||||| ||| |||||| ||| |||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 133 gaaacgga 140
||||||||
Sbjct: 123 gaaacgga 130
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtggg 108
|||||||||| || ||| ||||||||||||||||||| ||| | |||||| ||||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatggg 119
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
||||||||||| || ||||| | | |||||||||||| ||| ||||||||| ||| |||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
||||| | || ||||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 85 cattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||| || ||||| |||||| ||||| |||||||||| ||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||| ||| |||||| || ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacatttatatt 57
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgggaaat 112
|||||||||| || || |||||||||||||| ||||| ||| | ||| ||||||| |||
Sbjct: 64 aatgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaat 123
Query: 113 aatagaatgactcccattgtgaaacgga 140
||||| | || ||||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 102 atgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||||| |||||||||| ||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 gttttacaatgtaagttattttagcatctcccacatttatatt 47
|||| ||||||||||||||| ||| || ||||||||| |||||
Sbjct: 130 gtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||| ||||| ||| ||| ||| ||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacgga 12
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 95 aatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
|||||||||||||||||| || ||| ||| ||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacgga 133
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 76 gtctagattcattaatatcaatatgaatgtgggaaataatagaatga 122
||||||||||||||| ||| ||||| ||||||| ||| ||||||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatga 107
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| ||||||||| ||||| |||| |||||||||| ||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 74 atgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtg 133
||||||||||||||||| | | | ||||||||||| ||| ||||| | || |||||||
Sbjct: 78 atgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtg 19
Query: 134 aaacgga 140
|||||||
Sbjct: 18 aaacgga 12
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 attcattaatatcaatatgaatgtggg 108
||||||||||||| |||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtggg 75
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 70 atatatgtctagattcattaatatcaatatgaatgtggg 108
|||||| | |||||||||||| ||| |||||||||||||
Sbjct: 82 atatatatatagattcattaacatctatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtggg 108
|||||||||||| ||| |||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 53 aatgaatctagtcaaatatatatgtctagattcattaatatcaatatgaatgtgg 107
||||||||||| | ||| |||| |||||||||||||||||| | || |||||||
Sbjct: 62 aatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtgg 116
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 82 attcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtgaaacgga 140
||||||||| |||||||| || ||| |||| |||||||||| ||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtggg 108
|||||||||||| ||| |||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggg 93
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtggg 108
|||||| ||||||||| ||| |||||||||||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtggg 103
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 75 tgtctagattcattaatatcaatatgaatgtggg 108
|||||| ||||||||| ||| |||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtggg 44
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 78 ctagattcattaatatcaatatgaat 103
||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 75 tgtctagattcattaatatcaatatgaatgtgggaaataatagaatgactcccattgtga 134
|||||||||| ||||| ||| |||||||||||| ||| ||||| | || ||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 135 aacgga 140
||||||
Sbjct: 128 aacgga 133
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtggg 108
|||||||||||| ||| |||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggg 93
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 79 tagattcattaatatcaatatgaatgtggg 108
|||||||||||| ||| |||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtggg 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtggg 108
|||||||||||| ||| |||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tagattcattaatatcaatatgaatgtggg 108
|||||||||||| ||| |||||||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtggg 101
