miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00685;mir-36;AL110499.1/17063-17162 6239:Caenorhabditis elegans
          Length = 100

 Score =  194 bits (98), Expect = 1e-49
 Identities = 98/98 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttctagaaacccttggaccagtgtgggtgtccgttgcggtgctacattctctaatctgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ttctagaaacccttggaccagtgtgggtgtccgttgcggtgctacattctctaatctgta 62

                                                 
Query: 61  tcaccgggtgaacacttgcagtggtcctcgtggtttct 98
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tcaccgggtgaacacttgcagtggtcctcgtggtttct 100




>RF00685;mir-36;ABLE02007319.1/2747-2822 281687:Caenorhabditis
          japonica
          Length = 76

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 59 tatcaccgggtgaacacttgcagtggtcc 87
          |||||||||||||||||||||||||||||
Sbjct: 48 tatcaccgggtgaacacttgcagtggtcc 76