miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00685;mir-36;AL110499.1/17533-17637 6239:Caenorhabditis elegans
          Length = 105

 Score =  192 bits (97), Expect = 6e-49
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtcccagagaccttggtggtttttctctgcagtgatagatacttctaacaactcgcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   gggtcccagagaccttggtggtttttctctgcagtgatagatacttctaacaactcgcta 67

                                                
Query: 61  tcaccgggtgaaaaatcacctaggtctggagcctcct 97
           |||||||||||||||||||||||||||||||||||||
Sbjct: 68  tcaccgggtgaaaaatcacctaggtctggagcctcct 104




>RF00685;mir-36;ABEG01005150.1/10268-10376 135651:Caenorhabditis
          brenneri
          Length = 109

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 59 tatcaccgggtgaaaaatcacctaggtc 86
          |||||||||||||||||||||| |||||
Sbjct: 70 tatcaccgggtgaaaaatcaccaaggtc 97