miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00849;mir-60;U23511.1/16773-16702 6239:Caenorhabditis elegans
Length = 72
Score = 143 bits (72), Expect = 5e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 16 ttcttgaactggaagagtgccataaaatcatgacaaagtacgtgatattatgcacatttt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcttgaactggaagagtgccataaaatcatgacaaagtacgtgatattatgcacatttt 60
Query: 76 ctagttcaagac 87
||||||||||||
Sbjct: 61 ctagttcaagac 72
>RF00849;mir-60;ABEG01000158.1/15566-15495 135651:Caenorhabditis
brenneri
Length = 72
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 17 tcttgaactggaagagtgccataaaatcatgacaaagtacgtgatattatgcacattttc 76
|||||| |||||| ||| |||||||||||| || || ||| ||||||||||||||||||
Sbjct: 2 tcttgagctggaaaggtgacataaaatcatgtcagagaacgcgatattatgcacattttc 61
Query: 77 tagttcaagac 87
|||| ||||||
Sbjct: 62 tagtccaagac 72
>RF00849;mir-60;ABLE02025694.1/4091-4159 281687:Caenorhabditis
japonica
Length = 69
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 59 gatattatgcacattttctagttcaagac 87
|||||||||||||||||||||||||||||
Sbjct: 41 gatattatgcacattttctagttcaagac 69
