miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 107 bits (54), Expect = 7e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 233 tccgtcccacaatataagggattttgagtttttgtttgcaacgtttgaccactcgtctta 174
Query: 61 tt 62
||
Sbjct: 173 tt 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtttta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 107 bits (54), Expect = 7e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tccgtcccaaaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 175
Query: 61 tt 62
||
Sbjct: 174 tt 173
Score = 87.7 bits (44), Expect = 6e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 18 aatataagggattttgagtttttgtttgcagcgtttgaccactcgtcttatt 69
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||
Sbjct: 235 tccgtcccacaatataagggattttcagtttttgcttgcaacgtttgaccacttgtctta 176
Query: 61 tttaaa 66
||||||
Sbjct: 175 tttaaa 170
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 2 ccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtcttat 61
|||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10 ccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtcttat 69
Query: 62 t 62
|
Sbjct: 70 t 70
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||
Sbjct: 9 tccgtcccacaatataagggattttcagtttttgcttgcaacgtttgaccacttgtctta 68
Query: 61 tttaaa 66
||||||
Sbjct: 69 tttaaa 74
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 235 tccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtctta 176
Query: 61 tt 62
||
Sbjct: 175 tt 174
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 233 tccgtcccacaatataagggattttgagtttttgcttgcaacatttgaccactcgtctta 174
Query: 61 tt 62
||
Sbjct: 173 tt 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 19 aatataagggattttgagtttttgtttgcaatgtttgaccactcgtcttatttaaa 74
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa
Indica Group
Length = 242
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtaacgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||
Sbjct: 234 tccgtcccacaatataagggattttcagtttttgcttgtaacgtttgaccactcgtctta 175
Query: 61 tt 62
||
Sbjct: 174 tt 173
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa
Indica Group
Length = 243
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 9 tccgtcccacaatataagagattttgagtttttgcttgcaacgtttgaccactcggctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 73.8 bits (37), Expect = 9e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||| ||||||||||||||||||| | ||| ||||||||||||||||||
Sbjct: 235 tccgtcccacaatacaagggattttgagtttttgcgtacaatgtttgaccactcgtctta 176
Query: 61 t 61
|
Sbjct: 175 t 175
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 230 tccgtcccataatataagggattttgagtttttcattgcaacgtttgactactcgtctta 171
Query: 61 tt 62
||
Sbjct: 170 tt 169
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 9 tccgtcccataatataagagattttgagtttttctttataacgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgcaatgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 236 tccgtcccacaatataagggattttgagtttttgcttgcaacatttaaccactcgtctta 177
Query: 61 tt 62
||
Sbjct: 176 tt 175
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 235 tccgtcccacaatatgagggcttttgagtttttgcttgcaacgtttgaccactcgtctta 176
Query: 61 tt 62
||
Sbjct: 175 tt 174
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||| ||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 9 tccgtcccataatataggggattttgagtttttgcttgtaacgtttgactactcgtctta 68
Query: 61 tttaa 65
|||||
Sbjct: 69 tttaa 73
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa
Indica Group
Length = 242
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttggaacgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||||||||||||| || | || ||||||||||||||||||| |||||
Sbjct: 234 tccgtcccacaatataagggattttaagctactgcttgcaacgtttgaccactcatctta 175
Query: 61 tt 62
||
Sbjct: 174 tt 173
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 236 tccgtcccacaatataagggattttcagtttttacttgcaacgtttgaccactcgtctta 177
Query: 61 tt 62
||
Sbjct: 176 tt 175
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| | | ||||||| |||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgctcgtaacgtttaaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct: 234 tccgtcccacaatataagggattttgagttttcgcttacaacgtttgaccactcgtctta 175
Query: 61 tt 62
||
Sbjct: 174 tt 173
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| || ||||||||| ||||||| |||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttataacgtttga-cactcgtttta 67
Query: 61 tt 62
||
Sbjct: 68 tt 69
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 236 tccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccattcgtctta 177
Query: 61 tt 62
||
Sbjct: 176 tt 175
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtaatgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF00906;MIR1122;AL731617.3/71366-71211 39947:Oryza sativa Japonica
Group
Length = 156
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||
Sbjct: 145 tccgtcccacaatataaggaattttgattttttgtttgtaacgtttgaccactcgtctta 86
Query: 61 tttaaa 66
||||||
Sbjct: 85 tttaaa 80
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||||
Sbjct: 22 aatataagggattttaagtttttgtttgtaacgtttgaccactcatcttatttaaa 77
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 15 taagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24 taagggattttgagtttttgcttgcaacgtttgaccactcgtcttatt 71
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 14 ataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 223 ataagggattttgagttttttcttgcaacgtttgaccactcgtcttatt 175
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 87.7 bits (44), Expect = 6e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 7 ccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 15 ccacaatataagggattttgagtttttgcttgtagtgtttgaccactcgtcttatttaaa 74
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||| |||||| ||| | ||||||||||| ||||||||
Sbjct: 220 aatataagggattttgggtttttacttgtagtgtttgaccacttgtcttatt 169
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa
Indica Group
Length = 134
Score = 87.7 bits (44), Expect = 6e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 22 aatataagtgattttgagtttttgcttgcaacgtttgaccactcgtcttatt 73
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgacca 51
||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123 tccgtcccacaatataagggattttgagtttttacttgcaacgtttgacca 73
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||||
Sbjct: 9 tccgtcccacaatataagggattttgggtttttacttgtaacgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| ||| | |||||||||||||||||||
Sbjct: 230 tccgtcccataatataagggattttgagtttttacttgtatcgtttgaccactcgtctta 171
Query: 61 tt 62
||
Sbjct: 170 tt 169
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 9 tccgttccataatataagggattttgagtttttgtttgcactgtttgactactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 218 aatataagggattttgagtttttgcttacacactttgaccactcgtcttatt 167
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||||
Sbjct: 230 tccgtcccacaatataagggattttgggtttttacttgtaacgtttgaccactcgtctta 171
Query: 61 tt 62
||
Sbjct: 170 tt 169
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| ||| | |||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttacttgtatcgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 233 tccgtcccataatataagggattttgagtttttgtttgcactgtttgaccactcgtctta 174
Query: 61 tt 62
||
Sbjct: 173 tt 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgtttgcactatttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 9 tccgtcccagaatataagggattttgagtttttacttgcaacgtttgactactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 77.8 bits (39), Expect = 6e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggatttt-gagtttttgattgcaacgtttgaccactcgtctt 59
||||| ||||||||||||||||||| ||||||||| ||| |||| |||||||||||||||
Sbjct: 233 tccgtcccacaatataagggatttttgagtttttgcttgtaacgcttgaccactcgtctt 174
Query: 60 att 62
|||
Sbjct: 173 att 171
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa
Indica Group
Length = 242
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 19 aatataagggattttgagttttcgcttccaacgtttgaccactcgtcttatt 70
Score = 67.9 bits (34), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||| |||||||| |||||| || ||||||||||||||||||||||
Sbjct: 234 tccgtcccacaatataggggattttaagttttac-ttacaacgtttgaccactcgtctta 176
Query: 61 tttaaa 66
||||||
Sbjct: 175 tttaaa 170
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||| |||||||| |||||| ||||||||||||||||||||
Sbjct: 19 aatataagggattttaagtttttgcttgcaatgtttgaccactcgtcttatt 70
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||| |||||||| ||| ||||||||| |||||||||||||
Sbjct: 225 aatataagggattttaagtttttgcttgtaacgtttgaacactcgtcttatt 174
>RF01058;MIR806;AACV01010328.1/26487-26725 39947:Oryza sativa
Japonica Group
Length = 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 221 aatataagggattttgagtttttgcttgcactctttgaccactcgtcttatttaaa 166
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 19 aatataagggattctgagtttttgtttgcactgtttgaccactcgtcttatt 70
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 223 aatataagggattttgagtttttgcttgcacggtttgatcactcgtcttatttaaa 168
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgaatttttgcttgcgttgtttgaccactcgtctta 68
Query: 61 tttaaa 66
||||||
Sbjct: 69 tttaaa 74
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 12 atataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 20 atataagggattttgagtttttgtttgcactgtttgaccactcgtcttatt 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||| ||||||| || | ||||||||||||||||||
Sbjct: 233 tccgtcccataatataagggattttaagtttttacttatactgtttgaccactcgtctta 174
Query: 61 tt 62
||
Sbjct: 173 tt 172
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtactgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||| |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 231 tccgtcccataatataagagattttgagtttttccttgtactgtttgaccactcgtctta 172
Query: 61 tt 62
||
Sbjct: 171 tt 170
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa
Japonica Group
Length = 242
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttatttgcactgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 5 ttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtcttattta 64
||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 230 ttccataatataagggattttgagtttttatttgcattgtttgaccactcatcttattta 171
Query: 65 aa 66
||
Sbjct: 170 aa 169
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 233 tccgtcccataatataagggattttgagtttttgcttacagtgtttgaccactcgtctta 174
Query: 61 tt 62
||
Sbjct: 173 tt 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||| |||||||| || || |||||||||||| |||||
Sbjct: 9 tccgtcccataatataagggattttaagtttttgcttacagtgtttgaccactcatctta 68
Query: 61 tttaaa 66
||||||
Sbjct: 69 tttaaa 74
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 237 tccgtcccataatataagggattttgagtttttgcttgcactgtttgactactcgtctta 178
Query: 61 tt 62
||
Sbjct: 177 tt 176
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||| |||||||| ||| | ||||||| | ||||||||
Sbjct: 9 tccgtcccataatataagggattttaagtttttgtttgtactgtttgactaatcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 231 tccgtcccataatataagggattttgagtttttgcttgtactgtttgaccactcgtctta 172
Query: 61 tt 62
||
Sbjct: 171 tt 170
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||| |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagagattttgagtttttccttgtactgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa
Indica Group
Length = 238
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttt-gattgcactgtttgaccactcgtctta 67
Query: 61 tt 62
||
Sbjct: 68 tt 69
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||| ||||||||||||||||| | ||||| |||||||||||| |||||||
Sbjct: 220 aatacaagggattttgagttttagtttgcattgtttgaccactcatcttatt 169
>RF01058;MIR806;AACV01026200.1/8692-8927 39947:Oryza sativa Japonica
Group
Length = 236
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 228 tccgtcccataatataagggattttgagtttttgtttacactgtttgaccactcgtctta 169
Query: 61 tt 62
||
Sbjct: 168 tt 167
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||| |||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 9 tccgtcccataatatatgggattttgagtttttatttgcactctttgatcactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||| ||||||||| ||||| ||||||||||||| |||||
Sbjct: 9 tccgtcccataatataagggatttggagtttttgcttgcaccgtttgaccactcatctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 232 tccgtcccataatataagggattttgagtttttgcttactttgtttgaccactcgtctta 173
Query: 61 tt 62
||
Sbjct: 172 tt 171
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgactttttgcttgcactgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| | |||| ||||| ||||||||||| ||||||
Sbjct: 227 tccgtcccataatataagggattttgactatttgcttgcactgtttgaccacttgtctta 168
Query: 61 tt 62
||
Sbjct: 167 tt 166
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgcacggtttgactactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 234 tccgtcccataatataagggattttgagtttttgcttgtagtgtttgaccactcgtctta 175
Query: 61 tt 62
||
Sbjct: 174 tt 173
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 235 tccgtcccataatataagggattttgactttttgcttgcactgtttgaccactcgtctta 176
Query: 61 tt 62
||
Sbjct: 175 tt 174
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| ||||| ||||| ||||||||| ||||||||
Sbjct: 9 tccgtcccataatataagggattttgactttttatttgcactgtttgaccattcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtattgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 236 tccgtcccataatataagggattttgagtttttgtttagattgtttgaccactcgtctta 177
Query: 61 tt 62
||
Sbjct: 176 tt 175
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 73.8 bits (37), Expect = 9e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 2 ccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtcttat 61
|||| ||| |||||||||||||||||||||||| ||| | |||||||||||||||||||
Sbjct: 231 ccgtcccataatataagggattttgagtttttggttgaactgtttgaccactcgtcttat 172
Query: 62 t 62
|
Sbjct: 171 t 171
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 19 aatataagggattttgagtttttgtttgaactgtttgaccactcgtcttatt 70
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 218 aatataagggattttgagtttttgtttgtactgtttgaccactcgtcttatt 167
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| ||| | |||||| ||||||||||||
Sbjct: 19 aatataagggattttgagtttttgcttgtactgtttgattactcgtcttatt 70
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 224 aatataagggattttgacattttgcttgcactgtttgaccactcgtcttatttaaa 169
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 225 aatataaggaattttgagtttttgtttgcactgtttgaccactcgtcttatt 174
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| || | ||||||||||||||||||||
Sbjct: 19 aatataagggattttgagtttttgcttatactgtttgaccactcgtcttatt 70
>RF01062;MIR812;AP003347.3/33179-33351 39947:Oryza sativa Japonica
Group
Length = 173
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP008215.1/22501411-22501583 39947:Oryza sativa
Japonica Group
Length = 173
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatttaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaa 65
|||||||||||||||||||||||
Sbjct: 158 gtttgaccactcgtcttatttaa 136
>RF01062;MIR812;AAAA02010595.1/33394-33562 39946:Oryza sativa
Indica Group
Length = 169
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||| ||||||||
Sbjct: 169 gtttttgcttgcaacgtttgaccactagtcttatt 135
>RF01062;MIR812;AAAA02004615.1/12774-12603 39946:Oryza sativa
Indica Group
Length = 172
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AP003849.2/59096-58923 39947:Oryza sativa Japonica
Group
Length = 174
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||| ||||||||
Sbjct: 174 gtttttgcttgcaacgtttgaccacttgtcttatt 140
>RF01062;MIR812;AAAA02021982.1/29150-28978 39946:Oryza sativa
Indica Group
Length = 173
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgaccactcgtcttatttaa 38
>RF01062;MIR812;ABRL01000707.1/2129-1958 65489:Oryza barthii
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| |||||||||||||||||||||||||||||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttatttaaa 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||| |||||| |||||||||||| |||||||||||
Sbjct: 3 ttttgtttgcaatgtttgaccactcatcttatttaaa 39
>RF01062;MIR812;AACV01012425.1/11928-12097 39947:Oryza sativa
Japonica Group
Length = 170
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatttaa 38
>RF01062;MIR812;AACV01022584.1/5740-5911 39947:Oryza sativa
Japonica Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgaccactcgtcttatttaa 38
>RF01062;MIR812;AP003450.3/144108-144282 39947:Oryza sativa
Japonica Group
Length = 175
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 gttttcgattgcaacgtttgaccactcgtcttatttaa 38
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttattta 64
|||||| |||||||||||||||||||||||||||||
Sbjct: 174 tttttgcttgcaacgtttgaccactcgtcttattta 139
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa
Indica Group
Length = 238
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgtttgcactctttgatcactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 67.9 bits (34), Expect = 6e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 230 tccgtcccataatataagggattttgagttttt-cttgcactgtttgaccactcgtctta 172
Query: 61 tt 62
||
Sbjct: 171 tt 170
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||| |||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 231 tccgtcccataatataaaggattttgagtttttgcttgcactgtttgaccactcgtttta 172
Query: 61 tt 62
||
Sbjct: 171 tt 170
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||| ||| | |||||| |||||||||||||
Sbjct: 19 aatataagggattttgagtttttgtttgtactgtttgatcactcgtcttatt 70
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa
Japonica Group
Length = 240
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttaagtttttacttgcactgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||||| || || ||||||||| ||||||||||
Sbjct: 222 aatataaaagattttgagtttttgcttccactgtttgaccattcgtcttatt 171
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 232 tccgtcccataatataagggattttgatattttgcttgcactgtttgaccactcgtctta 173
Query: 61 tt 62
||
Sbjct: 172 tt 171
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| ||||| ||||||||| ||||||||||
Sbjct: 19 aatataagggattttgatattttgcttgcactgtttgaccattcgtcttatt 70
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgtgtgaactgtttgaccactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 58.0 bits (29), Expect = 6e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 11 aatataagggatttt-gagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||| ||||||||| ||| | ||||||||||||||||||||
Sbjct: 224 aatataagggatttttgagtttttggttgaactgtttgaccactcgtcttatt 172
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||| |||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 227 tccgtcccataatataacggattttgagtttttgcttgcactggttgaccactcgtctta 168
Query: 61 tt 62
||
Sbjct: 167 tt 166
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 26 gagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||| ||||| ||||||||||||||||||||
Sbjct: 26 gagtttttgtttgcactgtttgaccactcgtcttatt 62
>RF01062;MIR812;AAAA02004559.1/13841-13672 39946:Oryza sativa
Indica Group
Length = 170
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||||||||
Sbjct: 3 ttttgattgcaacgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||| || |||||||||||||| |||||||||
Sbjct: 170 gtttttgtttgaaatgtttgaccactcgttttatttaaa 132
>RF01062;MIR812;AACV01004534.1/3266-3096 39947:Oryza sativa
Japonica Group
Length = 171
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttattta 64
||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttattta 37
>RF01062;MIR812;AP005098.4/149489-149327 39947:Oryza sativa
Japonica Group
Length = 163
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttattt 63
||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattt 36
>RF01058;MIR806;AP005719.3/82355-82591 39947:Oryza sativa Japonica
Group
Length = 237
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||||| ||||| ||||| |||||| |||||||||||||||||
Sbjct: 19 aatataagggattttgacattttgtttgcactgtttgatcactcgtcttatttaaa 74
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 219 aatataagggattttgacattttgcttgcattgtttgaccactcgtcttatt 168
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa Indica
Group
Length = 241
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtct 58
|||||||| ||||||||||||||| ||||| ||||||||||||||||
Sbjct: 223 aatataagagattttgagtttttgcttgcactgtttgaccactcgtct 176
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 12 atataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 20 atataagagattttgagttttttcttgcactgtttgaccactcgtcttatt 70
>RF01062;MIR812;AAAA02018397.1/69188-69020 39946:Oryza sativa Indica
Group
Length = 169
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||||||
Sbjct: 161 ttgcaacgtttgaccactcgtcttatttaaa 131
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 12 caacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02016557.1/24055-24229 39946:Oryza sativa
Indica Group
Length = 175
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||| ||||||||||||||||||||
Sbjct: 1 gtttttgattgcaatgtttgaccactcgtcttatt 35
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatt 62
||||| |||||||||||||||||||||||||||
Sbjct: 173 ttttgcttgcaacgtttgaccactcgtcttatt 141
>RF01062;MIR812;AAAA02033648.1/11539-11708 39946:Oryza sativa Indica
Group
Length = 170
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||| |||||||||||||||||||||||||
Sbjct: 170 gtttttgtttgcaccgtttgaccactcgtcttatttaaa 132
>RF01062;MIR812;AAAA02031122.1/7716-7886 39946:Oryza sativa Indica
Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 171 gtttttgtttgcaacgtttgaccactcgtcttatt 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaa 65
||||||||||||||||||||||||||||||
Sbjct: 9 ttgcaacgtttgaccactcgtcttatttaa 38
>RF01062;MIR812;AAAA02025228.1/28145-27974 39946:Oryza sativa
Indica Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02011350.1/21929-21758 39946:Oryza sativa Indica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 172 gtttttgtttgcaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AACV01006032.1/3007-2837 39947:Oryza sativa
Japonica Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||
Sbjct: 159 aacgtttgaccactcgtcttatt 137
>RF01062;MIR812;AAAA02027427.1/13502-13329 39946:Oryza sativa
Indica Group
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AC104429.2/4630-4801 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AAAA02011276.1/7207-7036 39946:Oryza sativa Indica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtct 58
|||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtct 31
>RF01062;MIR812;AP002538.2/42335-42164 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 172 gtttttgcttgcaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AAAA02004436.1/4027-4199 39946:Oryza sativa Indica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AACV01009271.1/10556-10725 39947:Oryza sativa
Japonica Group
Length = 170
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgattataacgtttgaccactcgtcttatttaaa 39
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| ||||||||||||||| |||||||||||
Sbjct: 169 tttttgtttgcaacgtttgacctctcgtcttatt 136
>RF01062;MIR812;AACV01022520.1/58374-58200 39947:Oryza sativa
Japonica Group
Length = 175
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01013528.1/595-423 39947:Oryza sativa Japonica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 165 ttgcaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AAAA02007162.1/13852-14024 39946:Oryza sativa
Indica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| |||||||||||||| ||||||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgactactcgtcttatttaaa 39
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||| ||| |||||||||||||||||||||||||||
Sbjct: 171 ttttgtttgtaacgtttgaccactcgtcttatttaaa 135
>RF01062;MIR812;AP003871.3/81937-82107 39947:Oryza sativa Japonica
Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacatttgaccactcgtcttatttaaa 39
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 37 tgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||| |||||||||||||||||
Sbjct: 162 tgcaacgtttgaacactcgtcttatttaaa 133
>RF01062;MIR812;AAAA02029081.1/4555-4382 39946:Oryza sativa Indica
Group
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatttaaa 39
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||||||||||||||||
Sbjct: 174 gtttttgcttgcaatgtttgaccactcgtcttatt 140
>RF01062;MIR812;AL731589.3/75309-75482 39947:Oryza sativa Japonica
Group
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||| |||| ||||||||||||||||||
Sbjct: 174 gtttttgattgtaacgattgaccactcgtcttatt 140
>RF01062;MIR812;AAAA02010901.1/16278-16093 39946:Oryza sativa Indica
Group
Length = 186
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 186 gtttttgcttgcaacgtttgaccactcgtcttatt 152
>RF01062;MIR812;AACV01014767.1/38057-37887 39947:Oryza sativa
Japonica Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||| |||||||||||||||||||||||||
Sbjct: 171 gtttttgcttgcaccgtttgaccactcgtcttatttaaa 133
>RF01062;MIR812;AACV01010959.1/9597-9425 39947:Oryza sativa
Japonica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||||||
Sbjct: 9 ttgcaacgtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AACV01006063.1/27291-27465 39947:Oryza sativa
Japonica Group
Length = 175
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| || ||||||||||||||||||||||||||||
Sbjct: 175 gtttttgtttacaacgtttgaccactcgtcttatttaaa 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| || ||||| ||||||||||||||||||
Sbjct: 1 gtttttgtttacaacgcttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01011247.1/5926-6098 39947:Oryza sativa
Japonica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||| |||||||||| |||||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgactactcgtcttatttaa 136
>RF01062;MIR812;AC025296.10/17042-16871 4530:Oryza sativa (rice)
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||||||
Sbjct: 164 ttgcaacgtttgaccactcgtcttatttaaa 134
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||||| |||||| ||||||||
Sbjct: 1 gtttttgattgcaacgtttaaccacttgtcttatt 35
>RF01062;MIR812;AP008208.1/3789206-3789378 39947:Oryza sativa
Japonica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||| ||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccattcgtcttatt 139
>RF01062;MIR812;AACV01013079.1/2108-2281 39947:Oryza sativa
Japonica Group
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
|||||||||||||| ||||||||||||
Sbjct: 162 aacgtttgaccacttgtcttatttaaa 136
>RF01062;MIR812;AACV01002753.1/4109-4282 39947:Oryza sativa
Japonica Group
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||||||| |||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgttttatt 35
>RF01062;MIR812;AP004632.3/138567-138739 39947:Oryza sativa
Japonica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 1 gtttttaattgcaacgtttgaccacttgtcttatttaaa 39
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtctta 60
||||||| |||||||||||||||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtctta 141
>RF01062;MIR812;AAAA02004453.1/14160-14328 39946:Oryza sativa
Indica Group
Length = 169
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||| ||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatttaa 38
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| ||||||||||||| ||||||| |||||
Sbjct: 168 tttttgtttgcaacgtttgatcactcgttttatt 135
>RF01062;MIR812;AC118340.1/59212-59371 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaa 65
||||||||||||||||||||||||||||||
Sbjct: 152 ttgcaacgtttgaccactcgtcttatttaa 123
>RF01062;MIR812;AAAA02030716.1/2093-1923 39946:Oryza sativa Indica
Group
Length = 171
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||| ||||||||||||||||||||||||||
Sbjct: 171 gtttttgtttgtaacgtttgaccactcgtcttatttaa 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||| |||||| ||||||||||||||| |||||
Sbjct: 1 gtttttaattgcagcgtttgaccactcgttttatt 35
>RF01062;MIR812;AAAA02027965.1/10752-10582 39946:Oryza sativa
Indica Group
Length = 171
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
|||||| |||||||| ||||||||||||||||||||||
Sbjct: 1 gtttttaattgcaacatttgaccactcgtcttatttaa 38
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| || |||||||||||||||| |||||||
Sbjct: 170 tttttgctttcaacgtttgaccactcatcttatt 137
>RF01062;MIR812;AAAA02003779.1/4099-3929 39946:Oryza sativa Indica
Group
Length = 171
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 170 tttttgcttgtaacgtttgaccactcgtcttatttaaa 133
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||| ||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgactactcgtcttatt 35
>RF01062;MIR812;AACV01013318.1/11508-11337 39947:Oryza sativa
Japonica Group
Length = 172
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| |||||||||||||||||||||||||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttatt 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||| ||||||||||
Sbjct: 9 ttgcaacgtttgaccattcgtcttatt 35
>RF01062;MIR812;AP003957.2/18636-18808 39947:Oryza sativa Japonica
Group
Length = 173
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 37 tgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||||||||
Sbjct: 164 tgcaacgtttgaccactcgtcttatttaaa 135
>RF01062;MIR812;AP003343.3/135412-135241 39947:Oryza sativa
Japonica Group
Length = 172
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| |||||||||||||||| ||||||||||||||
Sbjct: 2 tttttgcttgcaacgtttgaccattcgtcttatttaaa 39
>RF01062;MIR812;AAAA02008402.1/8990-9163 39946:Oryza sativa Indica
Group
Length = 174
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaa 65
||||||||||||||||||||||||||||||
Sbjct: 166 ttgcaacgtttgaccactcgtcttatttaa 137
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| ||||| ||||| ||||||| ||||||||||
Sbjct: 235 tccgtcccataatataagggattttgactttttacttgcactgtttgactactcgtctta 176
Query: 61 tt 62
||
Sbjct: 175 tt 174
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa
Indica Group
Length = 243
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| |||||| || || ||||||||| ||||||||
Sbjct: 9 tccgtcccataatataagggattttgactttttgcttacactgtttgaccattcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||| | ||||| || || ||||||||| ||||||||
Sbjct: 235 tccgtcccataatataagggattttaactttttacttacactgtttgaccagtcgtctta 176
Query: 61 tttaaa 66
||||||
Sbjct: 175 tttaaa 170
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa
Indica Group
Length = 244
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 9 tccgtcccataatataagggattttgattttttgcttgcactgttcgaccattcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||| |||||||| |||||| ||| | | |||||||||||||||||
Sbjct: 236 tccgtcccataatataagagattttgattttttgtttgtaccatttgaccactcgtctta 177
Query: 61 tt 62
||
Sbjct: 176 tt 175
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| |||||||||||||||| ||||||| ||||| ||||| |||||||||||
Sbjct: 9 tccgtcccataatataagggattttgtgtttttgcttgcactctttgatcactcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttg 34
||||| ||| ||||||||||||||||||||||||
Sbjct: 234 tccgtcccataatataagggattttgagtttttg 201
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagttttt-cttgtactgtttgaccactcgtctta 67
Query: 61 tt 62
||
Sbjct: 68 tt 69
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||||||| ||||||||||||||| | |||||| || || ||||||||| ||||||||
Sbjct: 9 tccgttccataatataagggattttaactttttgcttacactgtttgaccattcgtctta 68
Query: 61 tt 62
||
Sbjct: 69 tt 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||||||| ||||||||||||||| | ||||| ||||| ||||||||||| ||||||
Sbjct: 235 tccgttccataatataagggattttaactttttacttgcactgtttgaccactggtctta 176
Query: 61 tt 62
||
Sbjct: 175 tt 174
>RF01062;MIR812;AAAA02014507.1/1802-1631 39946:Oryza sativa Indica
Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||| ||||||||||| |||||||||||||||||||
Sbjct: 170 ttttgtttgcaacgtttaaccactcgtcttatttaaa 134
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatttaa 65
||||||||||||||||| ||||||||
Sbjct: 13 aacgtttgaccactcgttttatttaa 38
>RF01062;MIR812;AACV01004632.1/2862-2689 39947:Oryza sativa
Japonica Group
Length = 174
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 37 tgcaacgtttgaccactcgtcttatttaa 65
|||||||||||||||||||||||||||||
Sbjct: 10 tgcaacgtttgaccactcgtcttatttaa 38
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| || ||||||||||| ||||||||||||
Sbjct: 173 tttttgctttcaacgtttgactactcgtcttatt 140
>RF01062;MIR812;AACV01015146.1/17582-17413 39947:Oryza sativa
Japonica Group
Length = 170
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttattta 64
||||||| ||| |||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttattta 37
>RF01062;MIR812;AAAA02021186.1/45161-45331 39946:Oryza sativa
Indica Group
Length = 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||| ||||||||||| |||||||||||||||||||
Sbjct: 3 ttttgtttgcaacgtttaaccactcgtcttatttaaa 39
>RF01062;MIR812;AACV01001491.1/2069-2243 39947:Oryza sativa
Japonica Group
Length = 175
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||||||| ||||||| |||||||||
Sbjct: 3 ttttgattgcaacgtttgaacactcgttttatttaaa 39
>RF01058;MIR806;AC097368.3/118507-118267 39947:Oryza sativa Japonica
Group
Length = 241
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 2 ccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtcttat 61
|||| ||| |||||||| |||||| |||||||| || || |||||||||||||||||||
Sbjct: 232 ccgtcccataatataagagattttaagtttttgcttacattgtttgaccactcgtcttat 173
Query: 62 t 62
|
Sbjct: 172 t 172
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||| |||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 19 aatataagagattttgagtttttacttgcactgtttgatcactcgtcttatt 70
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 10 caatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||| |||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 226 caataaaagggattttgatattttgcttgcactgtttgaccactcgtcttatt 174
>RF01062;MIR812;AL713939.6/126032-126207 4530:Oryza sativa (rice)
Length = 176
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtctt 59
||||||| ||||||||||||||||||||||||
Sbjct: 176 gtttttgtttgcaacgtttgaccactcgtctt 145
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||| |||||||||||||||||||||
Sbjct: 1 gtttttgcttgcagcgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP005807.3/11576-11404 39947:Oryza sativa Japonica
Group
Length = 173
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||||||
Sbjct: 162 caacgtttgaccactcgtcttatttaaa 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatt 35
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa
Indica Group
Length = 235
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| ||||| ||||||||| ||||||||||
Sbjct: 19 aatataagggattttgacattttgcttgcactgtttgaccattcgtcttatt 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 227 tccgtcccataatataagg-attttgacattttggttgcactgtttgaccactcgtctta 169
Query: 61 tt 62
||
Sbjct: 168 tt 167
>RF01058;MIR806;AAAA02000336.1/19576-19334 39946:Oryza sativa
Indica Group
Length = 243
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| ||||| ||||||||| ||||||||||
Sbjct: 19 aatataagggattttgacattttgcttgcactgtttgaccattcgtcttatt 70
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| |||| ||||| | ||||||||||||||||||
Sbjct: 225 aatataagggattttgacattttccttgcactgattgaccactcgtcttatt 174
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa
Indica Group
Length = 243
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| ||||| ||||||||| ||||||||||
Sbjct: 19 aatataagggattttgacattttgcttgcactgtttgaccattcgtcttatt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| ||| | ||||||||||||||||||||
Sbjct: 225 aatataagggattttgacattttgcttgtactgtttgaccactcgtcttatt 174
>RF01062;MIR812;AAAA02006096.1/10115-10287 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 173 gtttttgtttgtaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AAAA02005674.1/20425-20258 39946:Oryza sativa Indica
Group
Length = 168
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||
Sbjct: 156 aacgtttgaccactcgtcttatttaaa 130
>RF01062;MIR812;AAAA02004566.1/9745-9575 39946:Oryza sativa Indica
Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||| || |||||||||||||
Sbjct: 1 gtttttgattgcaacgttcgatcactcgtcttatt 35
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatt 62
||||| ||||||||||||||||||| |||||||
Sbjct: 169 ttttgcttgcaacgtttgaccactcatcttatt 137
>RF01062;MIR812;AAAA02021416.1/40369-40537 39946:Oryza sativa Indica
Group
Length = 169
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 161 ttgcaacgtttgaccactcgtcttatt 135
>RF01062;MIR812;AAAA02023753.1/2650-2478 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AAAA02030701.1/27133-27304 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 172 gtttttgcttggaacgtttgaccactcgtcttatt 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
||||||||||||||||||| |||||||
Sbjct: 9 ttgcaacgtttgaccactcatcttatt 35
>RF01062;MIR812;AAAA02003196.1/32277-32449 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgagcactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||| |||||||||||||||||||||
Sbjct: 173 gtttttgcttgcagcgtttgaccactcgtcttatt 139
>RF01062;MIR812;AAAA02008634.1/17996-17821 39946:Oryza sativa Indica
Group
Length = 176
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 176 gtttttgcttgtaacgtttgaccactcgtcttatt 142
>RF01062;MIR812;AAAA02007981.1/16808-16636 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgcttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02000569.1/44845-44673 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||||| ||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcggcttatt 139
>RF01062;MIR812;AAAA02000041.1/40875-40703 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||| ||||||||||||||||||||||
Sbjct: 173 gtttttgcttgctacgtttgaccactcgtcttatt 139
>RF01062;MIR812;ABRL01002103.1/5388-5215 65489:Oryza barthii
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02026017.1/48638-48465 39946:Oryza sativa
Indica Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
|||||||||||||||| ||||||||||||||
Sbjct: 9 ttgcaacgtttgaccattcgtcttatttaaa 39
>RF01062;MIR812;AC210489.1/6921-6765 4538:Oryza glaberrima
(African rice)
Length = 157
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 157 gtttttgcttgcaacgtttgatcactcgtcttatt 123
>RF01062;MIR812;AAAA02027640.1/6344-6172 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02015375.1/256-84 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttgcaccgtttgactactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02025478.1/24577-24748 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
||||||| |||||||||||||||||||||||
Sbjct: 164 ttgcaacatttgaccactcgtcttatttaaa 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
||||||||| |||||||||||||||||
Sbjct: 13 aacgtttgatcactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02007251.1/7007-6836 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| || ||||||||||||||||||||||||
Sbjct: 172 gtttttgcttacaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AL606446.1/53708-53879 39947:Oryza sativa Japonica
Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||| |||||||||||||||||||
Sbjct: 1 gtttttgattgcaaaatttgaccactcgtcttatt 35
>RF01062;MIR812;AP005698.3/85213-85385 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| || ||||||||||||||||||||||||
Sbjct: 173 gtttttgtttacaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgatcactcgtcttatt 35
>RF01062;MIR812;AP004330.3/32219-32048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
|||||| ||||||||||||||||||||||||
Sbjct: 164 ttgcaatgtttgaccactcgtcttatttaaa 134
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 12 caacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02011387.1/17306-17134 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| || ||||||||||||||||||||||||
Sbjct: 1 gtttttgcttacaacgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||| ||||||||||||
Sbjct: 173 gtttttgcttgcaatgtttgacaactcgtcttatt 139
>RF01062;MIR812;ABRL01001266.1/5370-5536 65489:Oryza barthii
Length = 167
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||| | |||||||||||||||||||||||||
Sbjct: 167 gtttttgtttgtaccgtttgaccactcgtcttatttaaa 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||||||| || ||||||||||| ||||||||||||
Sbjct: 1 gtttttgattacactgtttgaccacttgtcttatttaaa 39
>RF01062;MIR812;AAAA02011062.1/27832-28005 39946:Oryza sativa Indica
Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| || ||||||||||||||||||||||||
Sbjct: 174 gtttttgcttacaacgtttgaccactcgtcttatt 140
>RF01062;MIR812;AC098598.2/95832-96004 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||| ||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccaatcgtcttatt 139
>RF01062;MIR812;AACV01003520.1/10218-10389 39947:Oryza sativa
Japonica Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 164 ttgcaacgtttgaccactcgtcttatt 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| |||||||||||||||||| ||||||||
Sbjct: 2 tttttgcttgcaacgtttgaccacttgtcttatt 35
>RF01062;MIR812;AAAA02033862.1/2577-2751 39946:Oryza sativa Indica
Group
Length = 175
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 175 gtttttgcttgcaacgtttgatcactcgtcttatt 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| ||||||||||||||| |||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcatcttatt 35
>RF01062;MIR812;AP004738.3/117852-117676 39947:Oryza sativa
Japonica Group
Length = 177
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgatcactcgtcttatt 35
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatt 62
||||| |||||| ||||||||||||||||||||
Sbjct: 175 ttttgcttgcaatgtttgaccactcgtcttatt 143
>RF01062;MIR812;AL662934.3/50208-50378 39947:Oryza sativa Japonica
Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||| ||||||||
Sbjct: 171 gtttttgtttgcaacgtttgaccacttgtcttatt 137
>RF01062;MIR812;AAAA02025488.1/32380-32208 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||||||| |||||||||||
Sbjct: 9 ttgcaacgtttgaccactcttcttatttaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaa 65
|||||||||||||||||||| ||||||
Sbjct: 162 caacgtttgaccactcgtctaatttaa 136
>RF01062;MIR812;AAAA02000644.1/83237-83065 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AAAA02022622.1/23036-23207 39946:Oryza sativa
Indica Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||||||||| |||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcatcttatt 35
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| ||| ||||||| |||||| ||||||||||||
Sbjct: 171 tttttgcttgtaacgtttaaccacttgtcttatttaaa 134
>RF01062;MIR812;AACV01004780.1/45323-45496 39947:Oryza sativa
Japonica Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||||||||| |||| ||||||||||||||
Sbjct: 174 gtttttgtttgcaacgtttaaccattcgtcttatttaaa 136
>RF01062;MIR812;AACV01003822.1/5854-6022 39947:Oryza sativa
Japonica Group
Length = 169
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttatt 35
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 161 ttgcaacgtttgaccactcgtcttatt 135
>RF01062;MIR812;AAAA02031277.1/7485-7316 39946:Oryza sativa Indica
Group
Length = 170
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| | ||||| |||||||||||||||||||||||
Sbjct: 1 gtttttgctagcaacatttgaccactcgtcttatttaaa 39
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 162 ttgcaacgtttgaccactcgtcttatt 136
>RF01062;MIR812;AAAA02022467.1/164350-164522 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
||||||||||||||| |||||||||||||||
Sbjct: 165 ttgcaacgtttgaccgctcgtcttatttaaa 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 1 gtttttgtttgtgacgtttgtccactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02033926.1/2113-2280 39946:Oryza sativa Indica
Group
Length = 168
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||| ||||||||||||||||||||
Sbjct: 168 gtttttgattgcactgtttgaccactcgtcttatt 134
>RF01062;MIR812;AACV01007669.1/15637-15464 39947:Oryza sativa
Japonica Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||||||||||||||||
Sbjct: 174 gtttttgcttgcaatgtttgaccactcgtcttatt 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||| ||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacatttaaccactcgtcttatt 35
>RF01062;MIR812;AC121365.2/113520-113348 39947:Oryza sativa
Japonica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP008210.1/2457757-2457587 39947:Oryza sativa
Japonica Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 171 gtttttgcttgcaacgtttgatcactcgtcttatt 137
>RF01062;MIR812;AAAA02006568.1/7398-7226 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AP004302.3/102499-102666 39947:Oryza sativa Japonica
Group
Length = 168
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 168 gtttttgtttgtaacgtttgaccactcgtcttatt 134
>RF01062;MIR812;AP003704.3/7695-7526 39947:Oryza sativa Japonica
Group
Length = 170
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||| |||||||||||||||||||||
Sbjct: 170 gtttttgcttgcaccgtttgaccactcgtcttatt 136
>RF01062;MIR812;AAAA02030638.1/19667-19840 39946:Oryza sativa Indica
Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 174 gtttttgcttgcaacgtttgatcactcgtcttatt 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
||||||||| |||||||||||||||||
Sbjct: 9 ttgcaacgtatgaccactcgtcttatt 35
>RF01062;MIR812;AP003504.1/88831-89001 39947:Oryza sativa Japonica
Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 9 ttgcaacgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||
Sbjct: 159 aacgtttgaccactcgtcttatt 137
>RF01062;MIR812;AP008212.1/10411021-10411193 39947:Oryza sativa
Japonica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttattt 63
||||| ||||||||||||||||| |||||||||||
Sbjct: 2 ttttttattgcaacgtttgaccattcgtcttattt 36
>RF01062;MIR812;ABRL01000391.1/1533-1700 65489:Oryza barthii
Length = 168
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||| ||||||||||||||| ||||||||||||
Sbjct: 1 gtttttcattgcaacgtttgactactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||
Sbjct: 156 aacgtttgaccactcgtcttatt 134
>RF01062;MIR812;AP008215.1/20660684-20660840 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatttaaa 66
||||||| |||||||||||||||||||||||
Sbjct: 149 ttgcaacatttgaccactcgtcttatttaaa 119
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||| | ||||||| ||||||||||||||||
Sbjct: 1 gtttttgtttgtatcgtttgatcactcgtcttatttaa 38
>RF01062;MIR812;AAAA02006907.1/61212-61384 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||| |||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgatcactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
||||||||||||||||||||| |||||
Sbjct: 165 ttgcaacgtttgaccactcgttttatt 139
>RF01062;MIR812;AAAA02003932.1/22015-21845 39946:Oryza sativa
Indica Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcactgtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;DJ347888.1/191-351 4530:Oryza sativa (rice)
Length = 161
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||||||||||||||| ||||||||
Sbjct: 161 gtttttgcttgcaacgtttgaccacttgtcttatt 127
>RF01062;MIR812;AAAA02030866.1/12688-12519 39946:Oryza sativa
Indica Group
Length = 170
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||| |||||||||||||| |||||||||||||
Sbjct: 1 gtttttaattgcaacgtttgatcactcgtcttatt 35
>RF01062;MIR812;AACV01006015.1/16796-16959 39947:Oryza sativa
Japonica Group
Length = 164
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gtttttgtttggaacgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| ||||||||||||||||| |||||
Sbjct: 164 gtttttgcttgtaacgtttgaccactcgtattatt 130
>RF01062;MIR812;AP008207.1/7747472-7747302 39947:Oryza sativa
Japonica Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||||||||| |||||||
Sbjct: 171 gtttttgtttgcaacgtttgaccactcatcttatt 137
>RF01062;MIR812;AACV01003610.1/1608-1774 39947:Oryza sativa
Japonica Group
Length = 167
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||||||||||||||||
Sbjct: 1 gtttttgtttgcaatgtttgaccactcgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||| ||||||
Sbjct: 159 ttgcaacgtttgaccactcgccttatt 133
>RF01062;MIR812;AAAA02018550.1/1210-1039 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatttaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 44 tttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||
Sbjct: 156 tttgaccactcgtcttatttaaa 134
>RF01062;MIR812;AACV01002952.1/2774-2943 39947:Oryza sativa Japonica
Group
Length = 170
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtctta 60
||||| |||||||||||||||||||||||||
Sbjct: 168 ttttgcttgcaacgtttgaccactcgtctta 138
>RF01062;MIR812;AAAA02021140.1/3763-3594 39946:Oryza sativa Indica
Group
Length = 170
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||||||||| |||||||
Sbjct: 170 gtttttgcttgcaacgtttgaccactcatcttatt 136
>RF01062;MIR812;AACV01016994.1/6652-6822 39947:Oryza sativa
Japonica Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||||||||| |||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcatcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
||||||| |||||||||||||||||||
Sbjct: 159 aacgtttaaccactcgtcttatttaaa 133
>RF01062;MIR812;AP005913.3/63117-62944 39947:Oryza sativa Japonica
Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||||||
Sbjct: 9 ttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP008208.1/27940206-27940034 39947:Oryza sativa
Japonica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| |||||| ||||||||||||||||||||
Sbjct: 1 gtttttgtttgcaatgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01025949.1/8418-8245 39947:Oryza sativa Japonica
Group
Length = 174
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||||||||||||||||| |||||
Sbjct: 174 gtttttgtttgcaacgtttgaccactcgttttatt 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||| ||||||| ||||||||||||||||||||
Sbjct: 1 gttttcgattgcagtgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02017733.1/16042-16214 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||||||| || |||||||||||||| |||||||||
Sbjct: 1 gtttttgattgtaatgtttgaccactcgttttatttaaa 39
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttattt 63
||||||||||||||||||||| ||||||
Sbjct: 165 ttgcaacgtttgaccactcgttttattt 138
>RF01062;MIR812;AACV01016979.1/4172-4005 39947:Oryza sativa Japonica
Group
Length = 168
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||||| ||||| ||||||||||||||||||||||||
Sbjct: 168 gtttttgcttgcactgtttgaccactcgtcttatttaaa 130
>RF01062;MIR812;AACV01000531.1/1917-1745 39947:Oryza sativa
Japonica Group
Length = 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatttaaa 39
>RF01058;MIR806;AAAA02014507.1/19596-19366 39946:Oryza sativa
Indica Group
Length = 231
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 12 atataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||| ||||| ||||| ||||||||| ||||||||||
Sbjct: 20 atataagggattttgacattttgcttgcactgtttgaccattcgtcttatt 70
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 12 atataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||| ||||| ||||| |||||||||||| |||||||
Sbjct: 212 atataagggattttgacattttgcttgcactgtttgaccactcatcttatt 162
>RF01058;MIR806;AACV01000531.1/1711-1951 39947:Oryza sativa Japonica
Group
Length = 241
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||||
Sbjct: 195 aacgtttgaccactcgtcttatttaaa 169
>RF01062;MIR812;ABRL01000119.1/394-558 65489:Oryza barthii
Length = 165
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| |||||| ||||||||||||||||||||
Sbjct: 2 tttttgcttgcaatgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02034869.1/21771-21600 39946:Oryza sativa
Indica Group
Length = 172
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaa 65
||||||||||||| ||||||||||||||||
Sbjct: 9 ttgcaacgtttgatcactcgtcttatttaa 38
>RF01062;MIR812;AAAA02025316.1/8588-8419 39946:Oryza sativa Indica
Group
Length = 170
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| ||||||||||||| || ||||||||||||||
Sbjct: 2 tttttgtttgcaacgtttgatcattcgtcttatttaaa 39
>RF01062;MIR812;AAAA02000014.1/13074-12902 39946:Oryza sativa
Indica Group
Length = 173
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||| |||||||||||| |||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccattcgtcttatttaa 38
>RF01062;MIR812;AAAA02006808.1/23504-23678 39946:Oryza sativa Indica
Group
Length = 175
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| ||| |||||||||||||||||||||||
Sbjct: 174 tttttgcttgtaacgtttgaccactcgtcttatt 141
>RF01062;MIR812;AACV01012879.1/26666-26838 39947:Oryza sativa
Japonica Group
Length = 173
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatttaa 65
||||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatttaa 38
>RF01062;MIR812;AP004632.3/148714-148539 39947:Oryza sativa
Japonica Group
Length = 176
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttat 61
||||||||||||||||||||||||||
Sbjct: 9 ttgcaacgtttgaccactcgtcttat 34
>RF01062;MIR812;AAAA02015781.1/367-537 39946:Oryza sativa Indica
Group
Length = 171
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatt 62
|||||| ||||||| |||||||||||||||||||
Sbjct: 170 tttttgtttgcaacatttgaccactcgtcttatt 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
|||||| ||| |||||||| |||||||||||||||
Sbjct: 1 gtttttaattacaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AP003904.3/273-450 39947:Oryza sativa Japonica
Group
Length = 178
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
|||||||||| |||||| |||||||||||||||||||
Sbjct: 1 gtttttgattataacgttggaccactcgtcttatttaa 38
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 167 caacgtttgaccactcgtcttatt 144
>RF01062;MIR812;AACV01010311.1/56158-55985 39947:Oryza sativa
Japonica Group
Length = 174
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| |||||||||||||||| |||| |||||||||
Sbjct: 2 tttttgcttgcaacgtttgaccattcgttttatttaaa 39
>RF01062;MIR812;AAAA02013581.1/2947-2775 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaa 65
||||||| ||||||||||||||||||||||
Sbjct: 9 ttgcaacatttgaccactcgtcttatttaa 38
>RF01062;MIR812;AY749282.1/500-327 40149:Oryza meridionalis
Length = 174
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| || |||||||||||||||||| |||||||||
Sbjct: 173 tttttgcttacaacgtttgaccactcgttttatttaaa 136
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtctt 59
||||||| ||| ||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtctt 32
>RF01062;MIR812;AP004689.3/74467-74305 39947:Oryza sativa Japonica
Group
Length = 163
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||||| ||||||||||||| || ||||||||||||||
Sbjct: 2 tttttgcttgcaacgtttgatcattcgtcttatttaaa 39
>RF01062;MIR812;AK289013.1/3852-4024 39947:Oryza sativa Japonica
Group
Length = 173
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ttgcaacgtttgaccactcgtcttatttaa 65
|||||||||||||||||| |||||||||||
Sbjct: 9 ttgcaacgtttgaccacttgtcttatttaa 38
>RF01062;MIR812;AC144558.1/139667-139494 39947:Oryza sativa
Japonica Group
Length = 174
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatttaa 65
||||||| ||| |||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttggccactcgtcttatttaa 38
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica
Group
Length = 242
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tccgttccacaatataagggattttgagtttttg 34
||||| ||| ||||||||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttg 42
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1 tccgttccacaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 60
||||| ||| ||||||| ||||||||||||||| || | ||||||||||||||||||
Sbjct: 234 tccgtcccataatataaaggattttgagtttttacttatagtgtttgaccactcgtctta 175
Query: 61 tt 62
||
Sbjct: 174 tt 173
>RF01058;MIR806;AL772417.3/14129-13890 4530:Oryza sativa (rice)
Length = 240
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 13 tataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||| ||||| ||||| ||||||||| ||||||||||
Sbjct: 21 tataagggattttgacattttgcttgcactgtttgaccattcgtcttatt 70
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 aatataagggattttgagtttttgattgcaacgtttgaccactcgtcttatt 62
||||||||||||||||| ||||| | ||| |||||||||||| |||||||
Sbjct: 222 aatataagggattttgatattttgctcgcactgtttgaccactcatcttatt 171
>RF01062;MIR812;AAAA02005879.1/5825-5992 39946:Oryza sativa Indica
Group
Length = 168
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
|||| |||| |||||||||||||| ||||||||||||
Sbjct: 3 tttttattgtaacgtttgaccacttgtcttatttaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 36 ttgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||| ||||||
Sbjct: 160 ttgcaacgtttgaccactcgccttatt 134
>RF01062;MIR812;AAAA02014810.1/13149-13320 39946:Oryza sativa
Indica Group
Length = 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 cgtttgaccactcgtcttatttaaa 66
|||||||||||||||||||||||||
Sbjct: 15 cgtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02014521.1/2699-2528 39946:Oryza sativa Indica
Group
Length = 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 30 ttttgattgcaacgtttgaccactcgtct 58
||||| |||||||||||||||||||||||
Sbjct: 170 ttttgcttgcaacgtttgaccactcgtct 142
>RF01062;MIR812;AAAA02018583.1/14874-15047 39946:Oryza sativa
Indica Group
Length = 174
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatt 62
|||||||||||||||||||||| | ||||||||
Sbjct: 3 ttttgattgcaacgtttgaccatttgtcttatt 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 aacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||
Sbjct: 162 aacgtttgaccactcgtcttatt 140
>RF01062;MIR812;AAAA02010926.1/12447-12618 39946:Oryza sativa Indica
Group
Length = 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 29 tttttgattgcaacgtttgaccactcgtcttatttaa 65
|||||| ||| ||||||||| ||||||||||||||||
Sbjct: 171 tttttgtttgtaacgtttgatcactcgtcttatttaa 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||| ||||||||| |||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgatcactcgtcttatt 35
>RF01062;MIR812;AP008217.1/23465636-23465805 39947:Oryza sativa
Japonica Group
Length = 170
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatttaaa 66
||||| ||||| ||||||||||||||||||||||||
Sbjct: 3 ttttgcttgcactgtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AL663019.2/48460-48289 39947:Oryza sativa Japonica
Group
Length = 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ttttgattgcaacgtttgaccactcgtcttatt 62
||||| ||||||||||||| |||||||||||||
Sbjct: 3 ttttgtttgcaacgtttgatcactcgtcttatt 35
>RF01062;MIR812;ABXC01006225.1/128526-128697 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 156 gtttgaccactcgtcttatttaaa 133
>RF01062;MIR812;ABXC01000987.1/49747-49574 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 159 gtttgaccactcgtcttatttaaa 136
>RF01062;MIR812;ABXC01004413.1/188323-188497 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 160 gtttgaccactcgtcttatttaaa 137
>RF01062;MIR812;ABXC01005450.1/115662-115490 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;CR855170.1/139136-139309 4530:Oryza sativa (rice)
Length = 174
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 163 caacgtttgaccattcgtcttatttaaa 136
>RF01062;MIR812;AAAA02035822.1/1734-1558 39946:Oryza sativa Indica
Group
Length = 177
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 11 caacgtttgaccattcgtcttatttaaa 38
>RF01062;MIR812;AAAA02011985.1/3215-3046 39946:Oryza sativa Indica
Group
Length = 170
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 155 gtttgaccactcgtcttatttaaa 132
>RF01062;MIR812;AAAA02007012.1/32747-32574 39946:Oryza sativa
Indica Group
Length = 174
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02012042.1/11416-11586 39946:Oryza sativa
Indica Group
Length = 171
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;FJ266021.1/157822-157657 4533:Oryza brachyantha
Length = 166
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 12 caacgtttgaccattcgtcttatttaaa 39
>RF01062;MIR812;AAAA02007873.1/12057-11888 39946:Oryza sativa
Indica Group
Length = 170
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02004443.1/24290-24120 39946:Oryza sativa
Indica Group
Length = 171
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 12 caacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02011011.1/6798-6968 39946:Oryza sativa Indica
Group
Length = 171
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 160 caacgtttgaccattcgtcttatttaaa 133
>RF01062;MIR812;AAAA02035816.1/557-386 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 161 caacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AAAA02022102.1/84641-84470 39946:Oryza sativa
Indica Group
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttattt 63
||||||| ||| ||||||||||| ||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccgctcgtcttattt 36
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| ||||||| ||||||||||| |||||||
Sbjct: 172 gtttttgtttgcaacatttgaccactcatcttatt 138
>RF01062;MIR812;AP008214.1/2163949-2163791 39947:Oryza sativa
Japonica Group
Length = 159
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||| ||||||||||||||||||||||
Sbjct: 148 caacgcttgaccactcgtcttatttaaa 121
>RF01062;MIR812;AAAA02034323.1/17590-17763 39946:Oryza sativa
Indica Group
Length = 174
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
|||||||||||||||| |||||||||||
Sbjct: 12 caacgtttgaccactcttcttatttaaa 39
>RF01062;MIR812;AACV01006131.1/2219-2048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 28 gtttttgattgcaacgtttgaccactcgtctt 59
||||||| || |||||||||||||||||||||
Sbjct: 172 gtttttgttttcaacgtttgaccactcgtctt 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 28 gtttttgattgcaacgtttgaccactcgtcttatt 62
||||||| || |||||||||||| |||||||||||
Sbjct: 1 gtttttgcttacaacgtttgaccgctcgtcttatt 35
>RF01062;MIR812;AAAA02027573.1/25196-25026 39946:Oryza sativa
Indica Group
Length = 171
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 12 caacgtttgaccattcgtcttatttaaa 39
>RF01062;MIR812;AACV01012769.1/40584-40423 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AACV01008142.1/10694-10533 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 147 gtttgaccactcgtcttatttaaa 124
>RF01062;MIR812;AACV01018439.1/1110-1277 39947:Oryza sativa
Japonica Group
Length = 168
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AC144558.1/118736-118904 39947:Oryza sativa
Japonica Group
Length = 169
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AACV01023720.1/2532-2702 39947:Oryza sativa
Japonica Group
Length = 171
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 12 caacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02028052.1/20898-20729 39946:Oryza sativa
Indica Group
Length = 170
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatt 62
||||||||||||||||||||||||
Sbjct: 12 caacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01006444.1/8361-8528 39947:Oryza sativa
Japonica Group
Length = 168
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02001237.1/421-593 39946:Oryza sativa Indica
Group
Length = 173
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 162 caacgtttgaccattcgtcttatttaaa 135
>RF01062;MIR812;AP008208.1/30831425-30831611 39947:Oryza sativa
Japonica Group
Length = 187
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 182 caacgtttgaccattcgtcttatttaaa 155
>RF01062;MIR812;AACV01023883.1/2067-2235 39947:Oryza sativa Japonica
Group
Length = 169
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 154 gtttgaccactcgtcttatttaaa 131
>RF01062;MIR812;AAAA02007928.1/15883-15712 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
|||| |||||||||||||||||||||||
Sbjct: 161 caacatttgaccactcgtcttatttaaa 134
>RF01062;MIR812;AC091246.8/135795-135624 39947:Oryza sativa
Japonica Group
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 157 gtttgaccactcgtcttatttaaa 134
>RF01062;MIR812;AP004023.3/2827-2655 39947:Oryza sativa Japonica
Group
Length = 173
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 162 caacgtttgaccattcgtcttatttaaa 135
>RF01062;MIR812;AAAA02029564.1/10431-10603 39946:Oryza sativa Indica
Group
Length = 173
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 162 caacgtttgaccattcgtcttatttaaa 135
>RF01062;MIR812;AAAA02013850.1/30866-30697 39946:Oryza sativa
Indica Group
Length = 170
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||| ||||||||||||||
Sbjct: 12 caacgtttgaccattcgtcttatttaaa 39
>RF01062;MIR812;AACV01020588.1/577-411 39947:Oryza sativa Japonica
Group
Length = 167
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 152 gtttgaccactcgtcttatttaaa 129
>RF01062;MIR812;AP008218.1/12955264-12955092 39947:Oryza sativa
Japonica Group
Length = 173
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gtttgaccactcgtcttatttaaa 66
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttatttaaa 39
>RF01062;MIR812;AAAA02000177.1/14304-14475 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 caacgtttgaccactcgtcttatttaaa 66
||||||||||||||| ||||||||||||
Sbjct: 161 caacgtttgaccacttgtcttatttaaa 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 aacgtttgaccactcgtcttatt 62
|||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatt 35
