miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00846;mir-64;AC024798.1/92980-93089 6239:Caenorhabditis elegans
          Length = 110

 Score =  218 bits (110), Expect = 1e-56
 Identities = 110/110 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctccccgctgacctcgccgaatatgacactgaagcgttaccgaaccgttttcccacacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctccccgctgacctcgccgaatatgacactgaagcgttaccgaaccgttttcccacacct 60

                                                             
Query: 61  ggattcggtgcaacgatcagtggcatgctcggctagcgccagttaagtat 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggattcggtgcaacgatcagtggcatgctcggctagcgccagttaagtat 110




>RF00846;mir-64;AC024798.1/93126-93233 6239:Caenorhabditis elegans
          Length = 108

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 14 tcgccgaatatgacactgaagcgttaccgaac 45
          ||||||| |||||||||||||||| |||||||
Sbjct: 18 tcgccgattatgacactgaagcgtaaccgaac 49