miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00846;mir-64;AC024798.1/93126-93233 6239:Caenorhabditis elegans
          Length = 108

 Score =  198 bits (100), Expect = 9e-51
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagccttcgccgattatgacactgaagcgtaaccgaacaccatattttgagattctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   atggagccttcgccgattatgacactgaagcgtaaccgaacaccatattttgagattctg 68

                                                   
Query: 61  ctacgcgcagtgccatgctcggcgcgttggctccattaaa 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  ctacgcgcagtgccatgctcggcgcgttggctccattaaa 108




>RF00846;mir-64;AC024798.1/92980-93089 6239:Caenorhabditis elegans
          Length = 110

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 10 tcgccgattatgacactgaagcgtaaccgaac 41
          ||||||| |||||||||||||||| |||||||
Sbjct: 14 tcgccgaatatgacactgaagcgttaccgaac 45