miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00831;mir-73;U40422.1/30624-30726 6239:Caenorhabditis elegans
Length = 103
Score = 196 bits (99), Expect = 4e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 cagtgagagtcccacacacgactggacttccatatcgagccacagctatcaacgaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtgagagtcccacacacgactggacttccatatcgagccacagctatcaacgaatttg 60
Query: 61 ctggcaagatgtaggcagttcagttgtgcgtttatggag 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggcaagatgtaggcagttcagttgtgcgtttatggag 99
>RF00831;mir-73;AAGD02008731.1/16405-16304 31234:Caenorhabditis
remanei
Length = 102
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 58 ttgctggcaagatgtaggcagttcagttgt 87
||||||||||||||||||||||||||||||
Sbjct: 61 ttgctggcaagatgtaggcagttcagttgt 90
>RF00831;mir-73;ABEG01000826.1/44537-44436 135651:Caenorhabditis
brenneri
Length = 102
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 59 tgctggcaagatgtaggcagttcagttgt 87
|||||||||||||||||||||||||||||
Sbjct: 62 tgctggcaagatgtaggcagttcagttgt 90
>RF00831;mir-73;CAAC02000448.1/1381310-1381211 6238:Caenorhabditis
briggsae
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 ttgctggcaagatgtaggcagttcagttgt 87
||||||||||||||| ||||||||||||||
Sbjct: 58 ttgctggcaagatgttggcagttcagttgt 87
