miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AAAA02007981.1/16808-16636 39946:Oryza sativa Indica
Group
Length = 173
Score = 184 bits (93), Expect = 4e-46
Identities = 102/105 (97%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgcttgaccactcgtcttattcaaatgttttttacaaatatagaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 acgaaaagttatgtttaatatactctaggtaataaagtaagtcac 105
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 129 bits (65), Expect = 2e-29
Identities = 95/105 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 9 tccgtcccacaatataagggattttcagtttttgcttgcaacgtttgaccacttgtctta 68
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
|| || | |||||| |||||||| |||||||||||||||| ||||
Sbjct: 69 tttaaattttttttgcaaatataaaaaacgaaaagttatgcttaa 113
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 235 tccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtctta 176
Query: 71 ttcaa 75
|||||
Sbjct: 175 ttcaa 171
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 129 bits (65), Expect = 2e-29
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||
Sbjct: 233 tccgtcccacaatataagggattttgagtttttgcttgcaacatttgaccactcgtctta 174
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
||||||| |||||| |||||||| |||||||||||||
Sbjct: 173 ttcaatttttttttgcaaatataaaaaacgaaaagtt 137
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||||| |||||| |||||||| |||||| | ||||||||||||||||||
Sbjct: 19 aatataagggattttgagtttttgtttgcaatgtttgaccactcgtcttatt 70
>RF01062;MIR812;AACV01006063.1/27291-27465 39947:Oryza sativa
Japonica Group
Length = 175
Score = 127 bits (64), Expect = 8e-29
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 gtttttgtttacaacgcttgaccactcgtcttattcaaatgttgtttacaaatatagaaa 60
Query: 98 acgaaaagttatgtttaatatact 121
||||||||||||| ||||||||||
Sbjct: 61 acgaaaagttatgcttaatatact 84
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
||||||| || ||||| ||||||||||||||||||
Sbjct: 175 gtttttgtttacaacgtttgaccactcgtcttatt 141
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 125 bits (63), Expect = 3e-28
Identities = 87/95 (91%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 233 tccgtcccacaatataagggattttgagtttttgtttgcaacgtttgaccactcgtctta 174
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaag 105
||||||| ||||||||||||||| ||||| |||||
Sbjct: 173 ttcaatttttttttacaaatataaaaaacaaaaag 139
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||||||||| |||||||||||| |||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtttta 68
Query: 71 ttc 73
|||
Sbjct: 69 ttc 71
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa Indica
Group
Length = 242
Score = 121 bits (61), Expect = 5e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 234 tccgtcccacaatataagggattttcagtttttgcttgtaacgtttgaccactcgtctta 175
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
||||| | |||||| |||||||| |||| ||||||||
Sbjct: 174 ttcaaattttttttgcaaatataaaaaatgaaaagtt 138
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| |||| ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtaacgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 121 bits (61), Expect = 5e-27
Identities = 122/141 (86%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 3 ctactcattccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccac 62
|||||| ||||||| ||||||||||| |||||| |||||||||||||||| || |||||
Sbjct: 244 ctactccttccgtcccacaatataagggattttgagtttttgcttgcaacatttaaccac 185
Query: 63 tcgtcttattc-aattgttttttacaaatatagaaaacgaaaagttatgtttaatatact 121
||||||||||| |||| |||| | |||||||| ||||| |||||||||| |||| |||||
Sbjct: 184 tcgtcttattcaaatttttttctccaaatataaaaaacaaaaagttatgcttaaaatact 125
Query: 122 ctagggtataaagtaagtcac 142
||| ||||||||||||||
Sbjct: 124 gtagataataaagtaagtcac 104
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgcaatgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 121 bits (61), Expect = 5e-27
Identities = 116/133 (87%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 236 tccgtcccacaatataagggattttcagtttttacttgcaacgtttgaccactcgtctta 177
Query: 71 ttc-aattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggta 129
||| || | |||||| |||||||| ||||||||||||| || |||| |||| ||| |
Sbjct: 176 ttcaaaattttttttgcaaatataaaaaacgaaaagttgtgcttaaagtactgtagataa 117
Query: 130 taaagtaagtcac 142
|||||||||||||
Sbjct: 116 taaagtaagtcac 104
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||| | |||| || |||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgctcgtaacgtttaaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 119 bits (60), Expect = 2e-26
Identities = 114/132 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 234 tccgtcccaaaatataagggattttgagtttttgattgcaacgtttgaccactcgtctta 175
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggtat 130
||||| | |||||| |||||||| ||||||||||||| || |||| |||| ||| ||
Sbjct: 174 ttcaaatcttttttgcaaatataaaaaacgaaaagttgtgcttaaagtactgtagacaat 115
Query: 131 aaagtaagtcac 142
||||||||||||
Sbjct: 114 aaagtaagtcac 103
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||||| |||||||| ||||| || |||||||||||||||||||||
Sbjct: 18 aatataagggattttgagtttttgtttgcagcgtttgaccactcgtcttattcaa 72
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 119 bits (60), Expect = 2e-26
Identities = 114/132 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 236 tccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccattcgtctta 177
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggtat 130
||||||| |||||| |||||||| ||||| |||| ||||| |||| |||| ||| ||
Sbjct: 176 ttcaatttttttttgcaaatataaaaaacaaaaaattatgcttaaagtactatagataat 117
Query: 131 aaagtaagtcac 142
||||||||||||
Sbjct: 116 aaagtaagtcac 105
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| || | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtaatgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 111 bits (56), Expect = 5e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||| |||||| |||| |||| ||||||||||||||||
Sbjct: 9 tccgtcccacaatataagggattttgggtttttacttgtaacgtttgaccactcgtctta 68
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatg 110
||||| | |||||| |||||||| ||||||||||||||||
Sbjct: 69 ttcaaattttttttgcaaatataaaaaacgaaaagttatg 108
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| |||| | || ||||||||||||||||
Sbjct: 230 tccgtcccataatataagggattttgagtttttacttgtatcgtttgaccactcgtctta 171
Query: 71 ttcaa 75
|||||
Sbjct: 170 ttcaa 166
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 111 bits (56), Expect = 5e-24
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||| |||||| |||| |||| ||||||||||||||||
Sbjct: 230 tccgtcccacaatataagggattttgggtttttacttgtaacgtttgaccactcgtctta 171
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatg 110
||||| | |||||| |||||||| ||||||||||||||||
Sbjct: 170 ttcaaattttttttgcaaatataaaaaacgaaaagttatg 131
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| |||| | || ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttacttgtatcgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 111 bits (56), Expect = 5e-24
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 234 tccgtcccacaatataagggattttgagttttcgcttacaacgtttgaccactcgtctta 175
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggtat 130
||||| ||||||||| ||||| ||||||||||||| || |||| |||| ||| ||
Sbjct: 174 ttcaaaaattttttacagatataaaaaacgaaaagttgtgcttaaaatacggtagataat 115
Query: 131 aaagtaagtcac 142
||||||||||||
Sbjct: 114 aaagtaagtcac 103
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||| |||| |||| ||||||| |||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttataacgtttga-cactcgtttta 67
Query: 71 ttcaa 75
|||||
Sbjct: 68 ttcaa 72
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 109 bits (55), Expect = 2e-23
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 235 tccgtcccacaatataagggattttcagtttttgcttgcaacgtttgaccacttgtctta 176
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttat 109
|| || | |||||| ||||||| |||||||||||||||
Sbjct: 175 tttaaattttttttgtaaatata-aaaacgaaaagttat 138
Score = 87.7 bits (44), Expect = 7e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 12 ccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttat 71
||||| || |||||||| |||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 10 ccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtcttat 69
Query: 72 tcaa 75
||||
Sbjct: 70 tcaa 73
>RF01062;MIR812;AACV01013528.1/595-423 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| ||||||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaattttttttgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
|||||||||| |||||||
Sbjct: 61 acgaaaagttgtgtttaa 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 46 ttgcaacgcttgaccactcgtcttatt 72
|||||||| ||||||||||||||||||
Sbjct: 165 ttgcaacgtttgaccactcgtcttatt 139
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 107 bits (54), Expect = 7e-23
Identities = 89/98 (90%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttc-agtttttgcttgcaacgcttgaccactcgtctt 69
|||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 233 tccgtcccacaatataagggatttttgagtttttgcttgtaacgcttgaccactcgtctt 174
Query: 70 attcaattgttttttacaaatatagaaaacgaaaagtt 107
|||||| | |||||| |||||||| |||||||||||||
Sbjct: 173 attcaaat-ttttttgcaaatataaaaaacgaaaagtt 137
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| ||||||||| ||||| ||||||||||
Sbjct: 9 tccgtcccagaatataagggattttgagtttttacttgcaacgtttgactactcgtctta 68
Query: 71 ttcaat 76
||||||
Sbjct: 69 ttcaat 74
>RF01062;MIR812;AP008208.1/3789206-3789378 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaatttttttttgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|| ||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 61 acaaaaagttgtgcttaaagtactgtagataataaagtaagtcac 105
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| ||||||| |||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccattcgtcttattcaa 136
>RF01062;MIR812;AACV01003520.1/10218-10389 39947:Oryza sativa
Japonica Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaa 98
||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 2 tttttgcttgcaacgtttgaccacttgtcttattcaatt-ttttttacaaatataaaaaa 60
Query: 99 cgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 61 cgaaaagttgtgcttaaagtactgtagataataaagtaagtcac 104
Score = 61.9 bits (31), Expect = 4e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatat 92
|||||| ||||||||| ||||||||||||||||||||| | ||||||| ||||||
Sbjct: 172 gtttttacttgcaacgtttgaccactcgtcttattcaaat-ttttttaaaaatat 119
>RF01062;MIR812;AACV01013079.1/2108-2281 39947:Oryza sativa Japonica
Group
Length = 174
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
|||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||| ||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaatttttttttgcaaatataaaa 60
Query: 97 aacgaaaagttatgtttaa 115
||||||||||| |||||||
Sbjct: 61 aacgaaaagttgtgtttaa 79
>RF01062;MIR812;AAAA02017093.1/21668-21840 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||| ||||| |||||||||| |||||||||| | ||||||||||||||| |||
Sbjct: 1 gtttttgcttacaacgtttgaccactcatcttattcaaattttttttacaaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
||||||||||||| ||||
Sbjct: 61 acgaaaagttatgcttaa 78
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 aacgcttgaccactcgtcttattcaattgttttt 83
|||| |||| |||||||||||||||||| |||||
Sbjct: 161 aacgtttgatcactcgtcttattcaatttttttt 128
>RF01062;MIR812;AAAA02000177.1/14304-14475 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 7e-20
Identities = 89/101 (88%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 gtttttgcttctaacgtttgaccactcgtcttattcaatt-ttttttacaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaag 138
|||||||||| || |||| ||||| ||| ||||||||||
Sbjct: 60 acgaaaagttgtgcttaaaatactgtagataataaagtaag 100
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa
Indica Group
Length = 243
Score = 97.6 bits (49), Expect = 7e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 9 tccgtcccacaatataagagattttgagtttttgcttgcaacgtttgaccactcggctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
Score = 97.6 bits (49), Expect = 7e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||| ||| |||||| ||||||||| | ||| | ||||||||||||||||
Sbjct: 235 tccgtcccacaatacaagggattttgagtttttgcgtacaatgtttgaccactcgtctta 176
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
| ||||| |||||| |||||||| |||||||||||||
Sbjct: 175 tacaatttttttttgcaaatataaaaaacgaaaagtt 139
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 97.6 bits (49), Expect = 7e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||| | |||||||| |||||| |||||||||||| |||| |||| |||||||||||
Sbjct: 235 tccgtcttataatataagggattttaagtttttgcttgtaacgtttgaacactcgtctta 176
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
||||| | ||||||||||||||| ||| | |||||||
Sbjct: 175 ttcaaattttttttacaaatataaaaagcaaaaagtt 139
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||| | |||||||| |||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 9 tccgtcttataatataagggattttaagtttttgcttgcaatgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa Japonica
Group
Length = 240
Score = 97.6 bits (49), Expect = 7e-20
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||||| ||||||| ||||||| ||||||||||| || | ||||||| ||||||||
Sbjct: 232 tccgtctcataatataaaagattttgagtttttgcttccactgtttgaccattcgtctta 173
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct: 172 ttcaaaaaatttgtacaaatatagaaaacgaaaagttatgcttaa 128
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| |||||| | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttaagtttttacttgcactgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01062;MIR812;AAAA02021982.1/29150-28978 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| |||||||||||||||||| |||| |||||| ||||||| |||
Sbjct: 1 gtttttgtttgcaacgtttgaccactcgtcttatttaatttttttttgtaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatact 121
||||||||||||| |||| |||||
Sbjct: 61 acgaaaagttatgcttaaaatact 84
>RF01062;MIR812;AP004330.3/32219-32048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 gtttttacttacaacgtttgaccactcgtcttattcaatt-ttttttacaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatact 121
|||||||||||| |||| |||||
Sbjct: 60 ccgaaaagttatgcttaaaatact 83
>RF01062;MIR812;AP008215.1/16635749-16635577 39947:Oryza sativa
Japonica Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcaaattctttttacaaatataaaaaacgaaaagttatgctta 77
Query: 115 atatactctagggtataaagtaagtcac 142
| ||||| ||| ||||||||||||||
Sbjct: 78 aaatactgtagataataaagtaagtcac 105
>RF01062;MIR812;AP005387.3/148274-148447 39947:Oryza sativa Japonica
Group
Length = 174
Score = 95.6 bits (48), Expect = 3e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaa 98
|||||| ||| |||| |||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 2 tttttgtttgtaacgtttgatcactcgtcttattcaatttttttttacaaatataaaaaa 61
Query: 99 cgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 62 cgaaaagttgtgcttaaagtactgtagataataaagtaagtcac 105
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa Indica
Group
Length = 242
Score = 95.6 bits (48), Expect = 3e-19
Identities = 111/132 (84%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| |||||| || | ||||||||||| |||||||||| |||||
Sbjct: 234 tccgtcccacaatataagggattttaagctactgcttgcaacgtttgaccactcatctta 175
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggtat 130
||||||| |||||| | |||||| |||| |||||||| || |||| |||| ||| ||
Sbjct: 174 ttcaatttttttttgcgaatataaaaaatgaaaagttgtgcttaaagtactatagataat 115
Query: 131 aaagtaagtcac 142
||||||||||||
Sbjct: 114 aaagtaagtcac 103
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| |||| ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttggaacgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01062;MIR812;AAAA02018397.1/69188-69020 39946:Oryza sativa Indica
Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 92/105 (87%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 gtttttacttacaacgtttgaccactcgtcttattcaatt-ttttttacaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
| ||||| ||||| |||| ||||| ||| ||||||||||||||
Sbjct: 60 atgaaaaattatgcttaaaatactgtag---ataaagtaagtcac 101
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||| ||||||||| ||||||||||||||||||
Sbjct: 169 gtttttacttgcaacgtttgaccactcgtcttatt 135
>RF01062;MIR812;AC121365.2/113520-113348 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||| | ||||||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaatgtttgaccactcgtcttattcaaattttttttccaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
Score = 54.0 bits (27), Expect = 1e-06
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacg-cttgaccactcgtcttattcaattgttttt 83
||||||||||| |||| ||| |||||||||||||||||||| |||||
Sbjct: 173 gtttttgcttgtaacgtcttaaccactcgtcttattcaatttttttt 127
>RF01062;MIR812;AACV01022584.1/5740-5911 39947:Oryza sativa Japonica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| |||||||||||||||||| |||| |||||| ||||||| |||
Sbjct: 1 gtttttgtttgcaacgtttgaccactcgtcttatttaatttttttttgtaaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
||||||||||||| ||||
Sbjct: 61 acgaaaagttatgcttaa 78
>RF01062;MIR812;AACV01006791.1/2979-3151 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| |||||||||| |||||||||| | ||||||| ||||||| |||
Sbjct: 1 gtttttacttgcaacgtttgaccactcatcttattcaaattttttttataaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
|||||||||| |||||||
Sbjct: 61 acgaaaagttgtgtttaa 78
>RF01062;MIR812;AC093088.4/58736-58908 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| |||| |||| ||||||||| ||||||||||||| ||||||||||||||| |||
Sbjct: 1 gtttttacttgtaacgtttgaccacttgtcttattcaatttttttttacaaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
| ||||||||||| ||||
Sbjct: 61 atgaaaagttatgcttaa 78
>RF01062;MIR812;AAAA02013581.1/2947-2775 39946:Oryza sativa Indica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| |||||||| |||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 1 gtttttacttgcaacatttgaccactcgtcttatttaattgttttttgcaaatataaaat 60
Query: 98 acgaaaagttatgtttaa 115
|||||||||| |||||||
Sbjct: 61 acgaaaagttgtgtttaa 78
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 91.7 bits (46), Expect = 4e-18
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| |||||||| ||||| ||||||||||
Sbjct: 230 tccgtcccataatataagggattttgagtttttcattgcaacgtttgactactcgtctta 171
Query: 71 ttc-aattgttttttacaaatatagaaaacgaaaagtt 107
||| |||| |||||| |||||||| |||||||||||||
Sbjct: 170 ttcaaatttttttttccaaatataaaaaacgaaaagtt 133
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || ||||||||||||||| ||||||| || |||| ||||||||||||||||
Sbjct: 9 tccgtcccataatataagagattttgagtttttctttataacgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 91.7 bits (46), Expect = 4e-18
Identities = 85/97 (87%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||||| | ||||| ||||||||||
Sbjct: 237 tccgtcccataatataagggattttgagtttttgcttgcactgtttgactactcgtctta 178
Query: 71 ttcaa--ttgttttttacaaatatagaaaacgaaaag 105
||||| || ||||||||||||||| |||||||||||
Sbjct: 177 ttcaatttttttttttacaaatataaaaaacgaaaag 141
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtctcataatataagtgattttgagtttttgcttgcaacgtttgaccactcgtctta 71
Query: 71 tt 72
||
Sbjct: 72 tt 73
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 2 actactcattccgtctcacaatataagagattttcagtttttgcttgcaacgcttgacca 61
||||||| |||||| ||||||||||| |||||| ||||||| ||||||||| |||||||
Sbjct: 132 actactccctccgtcccacaatataagggattttgagtttttacttgcaacgtttgacca 73
>RF01062;MIR812;AAAA02027640.1/6344-6172 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| ||||||||||||||||||||| | | ||||||||||||| |||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttattcaaatttcttttacaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
| ||||||||| ||||| ||||| ||| ||||||||||||||
Sbjct: 61 ataaaaagttatatttaaaatactgtagataataaagtaagtcac 105
>RF01062;MIR812;AAAA02000014.1/13074-12902 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| ||||||| |||||||||| |||| ||||||||||||||| |||
Sbjct: 1 gtttttgtttgtaacgtttgaccattcgtcttatttaatttttttttacaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| || |||| ||||| ||| |||||| |||||||
Sbjct: 61 acgaaaagttgtgcttaaaatactgtagatgataaaggaagtcac 105
>RF01062;MIR812;AACV01016049.1/9539-9711 39947:Oryza sativa Japonica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| |||| |||| ||||||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttacttgtaacgtttgaccactcgtcttattcaaattttttttgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||| | || |||| ||||| ||| ||||||||||||||
Sbjct: 61 acgaaaagatgtgcttaaaatactgtagataataaagtaagtcac 105
>RF01062;MIR812;AACV01002753.1/4109-4282 39947:Oryza sativa Japonica
Group
Length = 174
Score = 89.7 bits (45), Expect = 2e-17
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| |||||||||||| |||||||||| | |||| |||||||| |||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgttttattcaattttattttgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 61 acgaaaagttgtgcttaaagtactgtagataataaagtaagtcac 105
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 89.7 bits (45), Expect = 2e-17
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| |||||||| || | |||| ||||||||||||||||| ||||||||||||||||
Sbjct: 235 tccgtcccacaatatgagggcttttgagtttttgcttgcaacgtttgaccactcgtctta 176
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
||||| |||||| ||||||| |||| ||||||||
Sbjct: 175 ttcaaaatttttttgcaaatatcaaaaatgaaaagtt 139
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||| | |||||| |||||||||||| |||| ||||| ||||||||||
Sbjct: 9 tccgtcccataatataggggattttgagtttttgcttgtaacgtttgactactcgtctta 68
Query: 71 ttcaatt 77
|| ||||
Sbjct: 69 tttaatt 75
>RF01062;MIR812;AP005807.3/11576-11404 39947:Oryza sativa Japonica
Group
Length = 173
Score = 87.7 bits (44), Expect = 7e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||| ||||| |||| ||||||||||||||||||||| | ||||| |||||||| |||
Sbjct: 1 gttttcgcttgaaacgtttgaccactcgtcttattcaaattctttttgcaaatatataaa 60
Query: 98 acgaaaagttatgtttaatatact 121
||||||||||||| |||| |||||
Sbjct: 61 acgaaaagttatgcttaaaatact 84
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||| ||||| ||||| ||||||||||||||||||
Sbjct: 173 gtttgtgcttacaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AAAA02023753.1/2650-2478 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| ||||||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttattcaaattttttttgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtc 140
| |||||||| || |||| |||| ||| ||||||||||||
Sbjct: 61 atgaaaagttgtgcttaaagtactatagataataaagtaagtc 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc 73
||||||||||| |||| |||||||||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgaccactcgtcttattc 138
>RF01062;MIR812;AACV01022520.1/58374-58200 39947:Oryza sativa
Japonica Group
Length = 175
Score = 85.7 bits (43), Expect = 3e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| ||||||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaat-tttttttcaaatataaaaa 59
Query: 98 acgaaaa 104
|||||||
Sbjct: 60 acgaaaa 66
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||| |||| ||| |||||||||||||||||
Sbjct: 175 gtttttacttgtaacgtttgtccactcgtcttattcaa 138
>RF01062;MIR812;AAAA02006907.1/61212-61384 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
|||||||||||||||| |||| |||||||||||||| |||| |||||| |||||||| ||
Sbjct: 1 gtttttgcttgcaacgtttgatcactcgtcttattcaaatttttttttgcaaatataaaa 60
Query: 97 aacgaaaagtt 107
|||||||||||
Sbjct: 61 aacgaaaagtt 71
>RF01062;MIR812;AP003849.2/59096-58923 39947:Oryza sativa Japonica
Group
Length = 174
Score = 85.7 bits (43), Expect = 3e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
||||||| |||||||| ||||||||||||||||||| |||| |||||| |||||||| ||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttattcaaatttttttttgcaaatataaaa 60
Query: 97 aacgaaaagttatgtttaa 115
| |||||||||||| ||||
Sbjct: 61 agcgaaaagttatgcttaa 79
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| ||||||||| |||||||||||
Sbjct: 174 gtttttgcttgcaacgtttgaccacttgtcttattcaa 137
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| | | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtactgtttgaccactcgtctta 68
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggtat 130
||||| ||| | |||||||| ||||||||||||| || ||||| |||| ||| ||
Sbjct: 69 ttcaaaaaatttgtgcaaatataaaaaacgaaaagttgtgcttaatgtactttagataat 128
Query: 131 aaagtaagtca 141
|||||||||||
Sbjct: 129 aaagtaagtca 139
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || ||||||||||||||| ||||||| |||| | | ||||||||||||||||
Sbjct: 231 tccgtcccataatataagagattttgagtttttccttgtactgtttgaccactcgtctta 172
Query: 71 ttcaa 75
|||||
Sbjct: 171 ttcaa 167
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 24 ataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||
Sbjct: 223 ataagggattttgagttttttcttgcaacgtttgaccactcgtcttattcaatttctttt 164
Query: 84 tacaaatatagaaaa 98
| |||||||| ||||
Sbjct: 163 tgcaaatataaaaaa 149
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 25 taagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 24 taagggattttgagtttttgcttgcaacgtttgaccactcgtcttattcaa 74
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| | | ||||||||||||||||
Sbjct: 231 tccgtcccataatataagggattttgagtttttgcttgtactgtttgaccactcgtctta 172
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatactctagggtat 130
||||| ||| | |||||||| ||||||||||||| || ||||| |||| ||| ||
Sbjct: 171 ttcaaaaaatttgtgcaaatataaaaaacgaaaagttgtgcttaatgtactttagataat 112
Query: 131 aaagtaagtca 141
|||||||||||
Sbjct: 111 aaagtaagtca 101
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || ||||||||||||||| ||||||| |||| | | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagagattttgagtttttccttgtactgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01062;MIR812;AC210489.1/6921-6765 4538:Oryza glaberrima (African
rice)
Length = 157
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttattcaatttttttttacaaatataaaaa 60
Query: 98 acgaaaagtt 107
| |||||||
Sbjct: 61 ataaaaagtt 70
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| |||| ||||||||||||||||
Sbjct: 157 gtttttgcttgcaacgtttgatcactcgtcttattcaa 120
>RF01062;MIR812;AL606446.1/53708-53879 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||| ||||||||||||||||||||| | ||||||||||||||| ||
Sbjct: 1 gtttttgattgcaaaatttgaccactcgtcttattcaaattttttttacaaatataaaag 60
Query: 98 acgaaaagttatgtttaa 115
|||||||||| |||||||
Sbjct: 61 acgaaaagttgtgtttaa 78
>RF01062;MIR812;AAAA02027965.1/10752-10582 39946:Oryza sativa Indica
Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||||||
Sbjct: 9 ttgcaacatttgaccactcgtcttatttaatttttttttgcaaatatagaaaacgaaaag 68
Query: 106 tt 107
||
Sbjct: 69 tt 70
>RF01062;MIR812;AAAA02011387.1/17306-17134 39946:Oryza sativa Indica
Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||| ||||| ||||||||||||||||||||| | |||||| ||||||| |||
Sbjct: 1 gtttttgcttacaacgtttgaccactcgtcttattcaaattttttttgcaaatattaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||| | ||||| |||||||||||||||
Sbjct: 173 gtttttgcttgcaatgtttgacaactcgtcttattcaa 136
>RF01062;MIR812;AP003871.3/81937-82107 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||||||| |||||||||||||||||| || | ||||||||||||||| |||
Sbjct: 1 gtttttgcttgcaacatttgaccactcgtcttatttaaattttttttacaaatataaaaa 60
Query: 98 acgaaaagtt 107
| ||||||||
Sbjct: 61 atgaaaagtt 70
>RF01062;MIR812;AACV01012425.1/11928-12097 39947:Oryza sativa
Japonica Group
Length = 170
Score = 83.8 bits (42), Expect = 1e-15
Identities = 62/68 (91%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatttaatttttttt---aaatatagaaa 57
Query: 98 acgaaaag 105
||||||||
Sbjct: 58 acgaaaag 65
>RF01062;MIR812;AACV01007669.1/15637-15464 39947:Oryza sativa
Japonica Group
Length = 174
Score = 83.8 bits (42), Expect = 1e-15
Identities = 91/106 (85%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
||||||||||||||| || |||||||||||||||| |||| |||| | |||||||| ||
Sbjct: 1 gtttttgcttgcaacatttaaccactcgtcttattcaaatttttttctccaaatataaaa 60
Query: 97 aacgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||| |||||||||| |||| ||||| ||| ||||||||||||||
Sbjct: 61 aacaaaaagttatgcttaaaatactgtagataataaagtaagtcac 106
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||| | |||||||||||||||||||||
Sbjct: 174 gtttttgcttgcaatgtttgaccactcgtcttattcaa 137
>RF01062;MIR812;AACV01012879.1/26666-26838 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
|||| |||||||||||||||||| |||| ||||||||||||||| |||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatttaatttttttttacaaatataaaaaacgaaaagtt 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 55 ttgaccactcgtcttattcaattgtttttta 85
||||||| ||||||||||||||| |||||||
Sbjct: 156 ttgaccattcgtcttattcaattttttttta 126
>RF01062;MIR812;AAAA02006568.1/7398-7226 39946:Oryza sativa Indica
Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| || |||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttattcaaattttttttgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
|| |||||||
Sbjct: 61 acaaaaagtt 70
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 55 ttgaccactcgtcttattcaattgtttttt 84
||||||||||||||||||||||| ||||||
Sbjct: 157 ttgaccactcgtcttattcaattttttttt 128
>RF01062;MIR812;AACV01016994.1/6652-6822 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 90/105 (85%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| |||||||||| |||||||||||| |||||| ||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcatcttattcaattttttttt--aaatataaaaa 58
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||| || || |||| |||| ||| ||||||||||||||
Sbjct: 59 acgaaaatttgtgcttaaagtactatagataataaagtaagtcac 103
>RF01062;MIR812;AP005913.3/63117-62944 39947:Oryza sativa Japonica
Group
Length = 174
Score = 83.8 bits (42), Expect = 1e-15
Identities = 91/106 (85%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
|||||| ||||||||| ||||||||||||||||||| || | |||||| |||||||| ||
Sbjct: 1 gtttttacttgcaacgtttgaccactcgtcttattcaaaattttttttgcaaatataaaa 60
Query: 97 aacgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 61 aacgaaaagttgtgcttaaagtactgtagataataaagtaagtcac 106
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||| | |||| || ||||||||||||||||||
Sbjct: 174 gtttttgctcgtaacgtttaaccactcgtcttattcaa 137
>RF01062;MIR812;AAAA02004453.1/14160-14328 39946:Oryza sativa Indica
Group
Length = 169
Score = 81.8 bits (41), Expect = 4e-15
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| |||||||||||||||||| ||| ||||||| ||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatttaat--ttttttataaatataaaaa 58
Query: 98 acgaaaagttatgtttaatatact 121
|||||||||| || |||| |||||
Sbjct: 59 acgaaaagttgtgcttaaaatact 82
>RF01062;MIR812;AAAA02004559.1/13841-13672 39946:Oryza sativa Indica
Group
Length = 170
Score = 81.8 bits (41), Expect = 4e-15
Identities = 88/103 (85%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||| |||||||| ||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 3 ttttgattgcaacgtttgaccactcgtcttattcaatttttttt---aaatataaaaaac 59
Query: 100 gaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 60 gaaaagttgtgcttaaagtactgtagataataaagtaagtcac 102
>RF01062;MIR812;AAAA02000041.1/40875-40703 39946:Oryza sativa Indica
Group
Length = 173
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
||||||||||||||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 18 ttgaccactcgtcttattcaaattttttttacaaatataaaaaacgaaaagtt 70
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||| ||| |||||||||||||||||||||
Sbjct: 173 gtttttgcttgctacgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AAAA02025228.1/28145-27974 39946:Oryza sativa Indica
Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| ||||||||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaat-ttttttgcaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
| ||||| || || |||| |||| ||| ||||||||||||||
Sbjct: 60 atgaaaaattgtgcttaaagtactatagataataaagtaagtcac 104
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa--ttgttttttacaaatataga 95
|||||||||||||||| |||| |||||||||||||||| || |||||| |||||||| |
Sbjct: 1 gtttttgcttgcaacgtttgatcactcgtcttattcaaattttttttttgcaaatataaa 60
Query: 96 aaacgaaaagtt 107
||||||||||||
Sbjct: 61 aaacgaaaagtt 72
>RF01062;MIR812;AAAA02022622.1/23036-23207 39946:Oryza sativa Indica
Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| |||||||||| |||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcatcttattcaaat-ttttttgcaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||| || || |||| |||| ||| ||||||||||||||
Sbjct: 60 acgaaaatttgtgcttaaagtactgtagataataaagtaagtcac 104
>RF01062;MIR812;AACV01013318.1/11508-11337 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| ||||||| ||||||||||||||| ||||| |||||||| |||
Sbjct: 1 gtttttacttgcaacgtttgaccattcgtcttattcaatt-tttttcccaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 60 acgaaaagttgtgcttaaactactatagataataaagtaagtcac 104
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgtttttta 85
||||||||||||||| ||||||||||||||||||||| | |||||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttattcaaatttttttta 125
>RF01062;MIR812;AAAA02011349.1/24079-23906 39946:Oryza sativa Indica
Group
Length = 174
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| ||||||| ||||||||||||||| |||||| ||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccattcgtcttattcaatt-ttttttgtaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| |||||| |||| ||| ||||||||||||||
Sbjct: 60 acgaaaagttgcgtttaaagtactgtagataataaagtaagtcac 104
>RF01062;MIR812;AACV01010959.1/9597-9425 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 4e-15
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| |||||||||||||||||| || ||||| |||||||| |||
Sbjct: 1 gtttttacttgcaacgtttgaccactcgtcttatttaaaattttttcgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 61 acgaaaagttatgcttaaagtactgtagataataaagtaagtcac 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgtttttt 84
|||||| ||| ||||| ||| ||||| ||||||||||||| ||||||
Sbjct: 173 gtttttacttacaacgtttggccacttgtcttattcaattctttttt 127
>RF01062;MIR812;AC025296.10/17042-16871 4530:Oryza sativa (rice)
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| || |||||| ||||||||||||| ||||||||||||||| |||
Sbjct: 1 gtttttgattgcaacgtttaaccacttgtcttattcaatt-ttttttacaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
| |||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 60 atgaaaagttgtgcttaaattactgtagataataaagtaagtcac 104
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttatt 72
||||| ||||||||| ||||||||||||||||||
Sbjct: 171 tttttacttgcaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AAAA02016557.1/24055-24229 39946:Oryza sativa Indica
Group
Length = 175
Score = 79.8 bits (40), Expect = 2e-14
Identities = 89/104 (85%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
||||||| |||||| | ||||||||||||||||||| ||| |||||| |||||||| ||
Sbjct: 1 gtttttgattgcaatgtttgaccactcgtcttattcaaatctttttttgcaaatataaaa 60
Query: 97 aacgaaaagttatgtttaatatactctagggtataaagtaagtc 140
||||||||||| ||||||| |||| ||| ||||||||||||
Sbjct: 61 aacgaaaagttgtgtttaaagtactgtagataataaagtaagtc 104
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||| |||||||||||||||||||||
Sbjct: 173 ttttgcttgcaacgtttgaccactcgtcttattcaa 138
>RF01062;MIR812;AAAA02030701.1/27133-27304 39946:Oryza sativa Indica
Group
Length = 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 43 tgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaa 102
||||||||||| |||||||||| |||||||||||| |||||| | |||||| |||| |||
Sbjct: 6 tgcttgcaacgtttgaccactcatcttattcaatttttttttgcgaatataaaaaatgaa 65
Query: 103 aagttatgtttaatatactctagggtataaagtaagtcac 142
||||| || |||| |||| ||| ||||||||||||||
Sbjct: 66 aagttgtgcttaaagtactatagataataaagtaagtcac 105
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||| |||| |||||||||||||||||||||
Sbjct: 172 gtttttgcttggaacgtttgaccactcgtcttattcaa 135
>RF01062;MIR812;AAAA02010595.1/33394-33562 39946:Oryza sativa Indica
Group
Length = 169
Score = 79.8 bits (40), Expect = 2e-14
Identities = 89/105 (84%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| ||||||||||||||||||||||| |||| | ||||| |||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttattcaattttttt----atatataaaaa 56
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||||||| |||| ||||| ||| |||||| |||||||
Sbjct: 57 acgaaaagttatgcttaaaatactatagataataaaggaagtcac 101
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| ||||||||| |||||||||||
Sbjct: 169 gtttttgcttgcaacgtttgaccactagtcttattcaa 132
>RF01062;MIR812;ABRL01002103.1/5388-5215 65489:Oryza barthii
Length = 174
Score = 77.8 bits (39), Expect = 7e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa-ttgttttttacaaatatagaa 96
|||||||||||||| | ||||||||||||||||||||| || |||||| |||||||| ||
Sbjct: 1 gtttttgcttgcaatgtttgaccactcgtcttattcaattttttttttgcaaatataaaa 60
Query: 97 aacgaaaagtt 107
|||| ||||||
Sbjct: 61 aacggaaagtt 71
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| | ||||||| |||||||||||||
Sbjct: 174 gtttttgcttgcactgtttgaccattcgtcttattcaa 137
>RF01062;MIR812;AAAA02027427.1/13502-13329 39946:Oryza sativa Indica
Group
Length = 174
Score = 77.8 bits (39), Expect = 7e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaata-tagaa 96
||||||| ||| |||| |||||||||||||||||| || | |||||| |||||| |||||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttatttaaattttttttgcaaatattagaa 60
Query: 97 aacgaaaagttatgtttaa 115
|||||||||||||| ||||
Sbjct: 61 aacgaaaagttatgcttaa 79
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaatt 77
||||||||||| || | |||||||||||||| ||||||||
Sbjct: 174 gtttttgcttggaatgtttgaccactcgtctcattcaatt 135
>RF01062;MIR812;AAAA02003779.1/4099-3929 39946:Oryza sativa Indica
Group
Length = 171
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| ||||| |||||||||||| ||| |||||| |||||||| |||
Sbjct: 1 gtttttgtttgcaacgtttgactactcgtcttatt--attttttttttcaaatataaaaa 58
Query: 98 acgaaaagttatgtttaa 115
|||||||||| |||||||
Sbjct: 59 acgaaaagttgtgtttaa 76
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttatt 72
|||||||||| |||| ||||||||||||||||||
Sbjct: 170 tttttgcttgtaacgtttgaccactcgtcttatt 137
>RF01062;MIR812;AAAA02028052.1/20898-20729 39946:Oryza sativa Indica
Group
Length = 170
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 49 caacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
||||| ||||||||||||||||||||| | ||||||||| ||||| |||||||||||||
Sbjct: 12 caacgtttgaccactcgtcttattcaaattttttttacagatataaaaaacgaaaagtt 70
>RF01062;MIR812;AP003504.1/88831-89001 39947:Oryza sativa Japonica
Group
Length = 171
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| |||||||||||||||||| || |||||||| |||||||| |||
Sbjct: 1 gtttttacttgcaacgtttgaccactcgtcttattgaaatgttttttgcaaatataaaaa 60
Query: 98 acgaaaa 104
|| ||||
Sbjct: 61 acaaaaa 67
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 50 aacgcttgaccactcgtcttattcaattgtttt 82
|||| ||||||||||||||||||||||| ||||
Sbjct: 159 aacgtttgaccactcgtcttattcaattttttt 127
>RF01062;MIR812;AAAA02010901.1/16278-16093 39946:Oryza sativa Indica
Group
Length = 186
Score = 77.8 bits (39), Expect = 7e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||| |||||| ||||||||||| ||||||||| | |||||| ||||||||||||
Sbjct: 1 gtttttgctagcaacgtttgaccactcg-cttattcaaattttttttgcaaatatagaaa 59
Query: 98 acgaaaagtta 108
|| ||||||||
Sbjct: 60 acaaaaagtta 70
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| |||||||||||||||||||||
Sbjct: 186 gtttttgcttgcaacgtttgaccactcgtcttattcaa 149
>RF01062;MIR812;AL606621.3/36682-36853 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 7e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 57 gaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
|||||||||||||||| |||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 20 gaccactcgtcttatttaatt-ttttttgcaaatataaaaaacgaaaagttatgtttaa 77
>RF01062;MIR812;AAAA02027656.1/553-725 39946:Oryza sativa Indica
Group
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttat 109
||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||
Sbjct: 18 ttgaccactcgtcttattcaattattttttccaaatataaaaaatgaaaagttat 72
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa
Indica Group
Length = 242
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||||| |||||||| |||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 9 tccgtctcataatataagggattttgagttttcgcttccaacgtttgaccactcgtctta 68
Query: 71 ttc 73
|||
Sbjct: 69 ttc 71
Score = 73.8 bits (37), Expect = 1e-12
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||| | |||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 234 tccgtcccacaatataggggattttaagtttta-cttacaacgtttgaccactcgtctta 176
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
|| || ||||||||||||||| ||||| |||||||
Sbjct: 175 tttaaaatttttttacaaatataaaaaacaaaaagtt 139
>RF01062;MIR812;AAAA02004566.1/9745-9575 39946:Oryza sativa Indica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| | || ||||||||||||||||| |||||| |||||||| |||
Sbjct: 1 gtttttgattgcaacgttcgatcactcgtcttattcaata-ttttttgcaaatataaaaa 59
Query: 98 acgaaaagttatgtttaa 115
| ||||||||||||||||
Sbjct: 60 atgaaaagttatgtttaa 77
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaat 76
|||||||||||||| |||||||||| |||||||||||
Sbjct: 169 ttttgcttgcaacgtttgaccactcatcttattcaat 133
>RF01062;MIR812;AAAA02000569.1/44845-44673 39946:Oryza sativa Indica
Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||| | ||| | ||||||||||||||||| ||||| |||||| |||||||| |||
Sbjct: 1 gtttttgcgtacaatgtttgaccactcgtcttatacaatttttttttgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| ||||||||||| |||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcggcttattcaa 136
>RF01062;MIR812;AACV01006032.1/3007-2837 39947:Oryza sativa Japonica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| |||||||||||||||||||| || |||||| |||||||| |||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttattcagtttttttttgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
| ||||||| |||||||
Sbjct: 61 ataaaaagttgtgtttaa 78
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 aacgcttgaccactcgtcttattcaa 75
|||| |||||||||||||||||||||
Sbjct: 159 aacgtttgaccactcgtcttattcaa 134
>RF01062;MIR812;CT831424.1/569-741 39946:Oryza sativa Indica Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
|||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttattcaatt-ttttttgcaaatataaaaaacgaaaagtt 69
>RF01062;MIR812;AP002538.2/42335-42164 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 172 gtttttgcttgcaacgtttgaccactcgtcttattcaatttttttt 127
Score = 44.1 bits (22), Expect = 0.001
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
|||| ||||||| | || |||||||||| |||||| ||||||| |||||||||||||
Sbjct: 13 aacgtttgaccatttgttttattcaatt-ttttttgtaaatataaaaaacgaaaagtt 69
>RF01062;MIR812;AACV01006131.1/2219-2048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||| ||||| |||||| |||||||||||||| | |||||| ||||| || |||
Sbjct: 1 gtttttgcttacaacgtttgaccgctcgtcttattcaaatttttttttcaaatgtaaaaa 60
Query: 98 acgaaaagttatgtttaa 115
||||||| ||||| ||||
Sbjct: 61 acgaaaaattatgcttaa 78
>RF01062;MIR812;AAAA02034869.1/21771-21600 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| |||| ||||||||||||| |||| |||||| |||||||| |||
Sbjct: 1 gtttttacttgcaacgtttgatcactcgtcttatttaatt-ttttttgcaaatataaaaa 59
Query: 98 acgaaaagttatgtttaa 115
||||||||||||||||
Sbjct: 60 gtgaaaagttatgtttaa 77
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| ||||||||| |||| |||| |||||||||||
Sbjct: 172 gtttttacttgcaacgtttgaacacttgtcttattcaa 135
>RF01062;MIR812;AP006523.2/118080-118251 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
|||||| | ||||| ||||||||||||||||| |||||| |||||||| |||||||||||
Sbjct: 9 ttgcaaagtttgactactcgtcttattcaatt-ttttttgcaaatataaaaaacgaaaag 67
Query: 106 ttatgtttaa 115
||||| ||||
Sbjct: 68 ttatgattaa 77
>RF01062;MIR812;AP008213.1/28888545-28888717 39947:Oryza sativa
Japonica Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| ||||||| ||||||||||||| | | |||| |||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccattcgtcttattcaaatttattttgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 aacgcttgaccactcgtcttattcaa 75
|||| |||||||||||||||||||||
Sbjct: 161 aacgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AP004262.2/8297-8125 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaa 98
|||| ||||| |||| ||||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 2 ttttcgcttgtaacgtttgaccactcgtcttattcaatttttttttgcaaatataaaaac 61
Query: 99 cgaaaa 104
||||||
Sbjct: 62 cgaaaa 67
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||||||| || ||||||||||||||||||
Sbjct: 173 gtttttacttgcaacattttaccactcgtcttattcaa 136
>RF01062;MIR812;AACV01011247.1/5926-6098 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaaatttttttgcaaatatcaaaa 60
Query: 98 acgaaaagtt 107
| ||||||||
Sbjct: 61 atgaaaagtt 70
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaatt 77
||||||||||| |||| ||||| |||||||||||| ||||
Sbjct: 173 gtttttgcttgtaacgtttgactactcgtcttatttaatt 134
>RF01062;MIR812;AC104429.2/4630-4801 39947:Oryza sativa Japonica
Group
Length = 172
Score = 73.8 bits (37), Expect = 1e-12
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| || |||||||||||||||||||| |||||| |||||||| |||
Sbjct: 1 gtttttgattgcaacgtttaaccactcgtcttattcaatt-ttttttgcaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
| ||||| || || |||| |||| ||| ||||||||||||||
Sbjct: 60 atgaaaacttgtgcttaaagtactgtagataataaagtaagtcac 104
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||| |||| || ||||||||||||||||||
Sbjct: 172 gtttttacttgtaacgtttaaccactcgtcttattcaa 135
>RF01062;MIR812;AAAA02000644.1/83237-83065 39946:Oryza sativa Indica
Group
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||||| |||||| |||||||| |||| |||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcaatttttttttgcaaatataaaaaataaaaagttatgctta 77
Query: 115 a 115
|
Sbjct: 78 a 78
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||| |||| |||||||||||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AAAA02007162.1/13852-14024 39946:Oryza sativa Indica
Group
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| ||||| |||||||||||| || | |||||| |||||||| |||
Sbjct: 1 gtttttgtttgcaacgtttgactactcgtcttatttaaattttttttgcaaatataaaaa 60
Query: 98 acgaaaagt 106
|||||||||
Sbjct: 61 acgaaaagt 69
>RF01062;MIR812;AP003957.2/18636-18808 39947:Oryza sativa Japonica
Group
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||| ||||||||||||| |||| ||||||||||||||| ||||| ||||||| ||||||
Sbjct: 18 ttgatcactcgtcttatttaatttttttttacaaatataaaaaacaaaaagttgtgttta 77
Query: 115 a 115
|
Sbjct: 78 a 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||| | ||||||| ||||||||||||||||||
Sbjct: 173 gtttttacatgcaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AL713939.6/126032-126207 4530:Oryza sativa (rice)
Length = 176
Score = 73.8 bits (37), Expect = 1e-12
Identities = 92/108 (85%), Gaps = 3/108 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa--ttgttttttacaaatat-ag 94
||||||||||||| || ||||||||||||||||||||| || |||||| ||||||| |
Sbjct: 1 gtttttgcttgcagcgtttgaccactcgtcttattcaatttttttttttgcaaatataaa 60
Query: 95 aaaacgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 61 aaaacgaaaagttgtgcttaaagtactgtagataataaagtaagtcac 108
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| |||||||| ||||||||||||||| |||||
Sbjct: 176 gtttttgtttgcaacgtttgaccactcgtcttgttcaa 139
>RF01062;MIR812;AP003904.3/273-450 39947:Oryza sativa Japonica Group
Length = 178
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 57 gaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttat 109
|||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 20 gaccactcgtcttatttaatttttttttgcaaatataaaaaacgaaaagttat 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 49 caacgcttgaccactcgtcttattcaa 75
||||| |||||||||||||||||||||
Sbjct: 167 caacgtttgaccactcgtcttattcaa 141
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| |||||| | ||||||||||||||||
Sbjct: 230 tccgtcccataatataagggattttgagttttt-cttgcactgtttgaccactcgtctta 172
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
||||| ||| | |||||||| |||||||||||||||| ||||
Sbjct: 171 ttcaaaaaatttgtgcaaatataaaaaacgaaaagttatgcttaa 127
Score = 48.1 bits (24), Expect = 6e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||| ||||| |||| |||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgtttgcactctttgatcactcgtctta 68
Query: 71 ttca 74
||||
Sbjct: 69 ttca 72
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| | ||||||||||| | ||||||||||||||||
Sbjct: 232 tccgtcccataatataagggattttgatattttgcttgcactgtttgaccactcgtctta 173
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
||||| ||| | |||||||| |||||||||||||||| ||||
Sbjct: 172 ttcaaaaaatttgtgcaaatataaaaaacgaaaagttatgcttaa 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||||| | ||||||||||| | ||||||| |||||||||||||
Sbjct: 19 aatataagggattttgatattttgcttgcactgtttgaccattcgtcttattcaa 73
>RF01062;MIR812;AAAA02030716.1/2093-1923 39946:Oryza sativa Indica
Group
Length = 171
Score = 71.9 bits (36), Expect = 4e-12
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
||||| || |||||||||||| |||||||||| |||||| |||||||| |||||||||||
Sbjct: 9 ttgcagcgtttgaccactcgttttattcaatt-ttttttgcaaatataaaaaacgaaaag 67
Query: 106 ttatgtttaatatactctagggtataaagtaagtca 141
|| || |||| ||| | ||| ||| ||||||||||
Sbjct: 68 ttgtgcttaaaataatgtagattattaagtaagtca 103
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
||||||| ||| |||| |||||||||||||||||| |||| |||||
Sbjct: 171 gtttttgtttgtaacgtttgaccactcgtcttatttaatttttttt 126
>RF01062;MIR812;AP008215.1/22501411-22501583 39947:Oryza sativa
Japonica Group
Length = 173
Score = 71.9 bits (36), Expect = 4e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||||| |||||||||||||||||| || | |||||| | ||| || |||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatttaaatatttttttcgaatgtaaaaa 60
Query: 98 acgaaaagttatgtttaatatact 121
|| ||||||| || |||| |||||
Sbjct: 61 acaaaaagttgtgcttaaaatact 84
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||||||| || | |||||||||||||||||| |||| |||||
Sbjct: 173 gtttttgcttttaaagtttgaccactcgtcttatttaatttttttt 128
>RF01062;MIR812;AAAA02007928.1/15883-15712 39946:Oryza sativa Indica
Group
Length = 172
Score = 71.9 bits (36), Expect = 4e-12
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||||| | ||||| ||||||| |||| ||||||||||||||
Sbjct: 18 ttgaccactcgtcttattcaatt-tcttttataaatataaaaaataaaaagttatgttta 76
Query: 115 atatactctagggtataaagtaagtcac 142
| ||||| || ||||||||||||||
Sbjct: 77 aaatactgtaaataataaagtaagtcac 104
>RF01062;MIR812;AP004632.3/138567-138739 39947:Oryza sativa Japonica
Group
Length = 173
Score = 71.9 bits (36), Expect = 4e-12
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
|||||||| ||||||||| |||||||| || | |||||| |||||||| ||||| |||||
Sbjct: 9 ttgcaacgtttgaccacttgtcttatttaaattttttttgcaaatataaaaaacaaaaag 68
Query: 106 ttatgtttaatatactctagggtataaagtaagtca 141
|| || |||| ||||| ||| |||||||||||||
Sbjct: 69 ttgtgcttaaaatactgtagataataaagtaagtca 104
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| |||||||||||||||| ||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtcttaatcaa 136
>RF01058;MIR806;AC097368.3/118507-118267 39947:Oryza sativa Japonica
Group
Length = 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 12 ccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttat 71
||||| || ||||||||||||||| ||||||||||| || | |||||||||||||||||
Sbjct: 232 ccgtcccataatataagagattttaagtttttgcttacattgtttgaccactcgtcttat 173
Query: 72 tcaa 75
||||
Sbjct: 172 tcaa 169
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||||| ||||||| |||||| | |||| ||||||||||||||||
Sbjct: 19 aatataagagattttgagtttttacttgcactgtttgatcactcgtcttattcaa 73
>RF01062;MIR812;AAAA02019865.1/3288-3116 39946:Oryza sativa Indica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
||||||||||||||||||||| | |||||| |||||||| |||||||||||
Sbjct: 18 ttgaccactcgtcttattcaaattttttttgcaaatataaaaaacgaaaag 68
>RF01062;MIR812;AAAA02033862.1/2577-2751 39946:Oryza sativa Indica
Group
Length = 175
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
||||||||||| |||| |||||||||| |||||||| || | ||||||| ||||||| ||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcatcttattcaaaatattttttataaatataaaa 60
Query: 97 aacgaaaagtt 107
|||||||||||
Sbjct: 61 aacgaaaagtt 71
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||||||||||||| |||| |||||||||||||
Sbjct: 175 gtttttgcttgcaacgtttgatcactcgtcttatt 141
>RF01062;MIR812;ABRL01000391.1/1533-1700 65489:Oryza barthii
Length = 168
Score = 69.9 bits (35), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaaaacgaaaa 104
|||||||| ||||| ||||||||||||| |||| |||||| |||||||| ||||||||||
Sbjct: 9 ttgcaacgtttgactactcgtcttattcaaatttttttttccaaatataaaaaacgaaaa 68
Query: 105 gtt 107
|||
Sbjct: 69 gtt 71
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 aacgcttgaccactcgtcttattcaa 75
|||| |||||||||||||||||||||
Sbjct: 156 aacgtttgaccactcgtcttattcaa 131
>RF01062;MIR812;AAAA02010366.1/9316-9488 39946:Oryza sativa Indica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||||||||| || ||||||||| ||||||||||| | ||| | ||||||| |||||
Sbjct: 3 ttttgcttgcaccgtttgaccacttgtcttattcaaaagatttgtgtaaatataaaaaac 62
Query: 100 gaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||||||| |||| |||| | || ||||||||||||||
Sbjct: 63 gaaaagttatgcttaaagtactttgggtaataaagtaagtcac 105
>RF01062;MIR812;AP004727.2/137063-136892 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
|||| ||| ||||| |||| |||||||||||||||| | |||||| |||||||| |||||
Sbjct: 3 tttttctttcaacgtttgatcactcgtcttattcaaattttttttgcaaatataaaaaac 62
Query: 100 gaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||| || |||| ||||| || ||||||||||||||
Sbjct: 63 aaaaagttgtgcttaaaatactgtaaataataaagtaagtcac 105
>RF01062;MIR812;AACV01003610.1/1608-1774 39947:Oryza sativa Japonica
Group
Length = 167
Score = 69.9 bits (35), Expect = 2e-11
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa---ttgttttttacaaatatag 94
||||||| |||||| | ||||||||||||||||||||| || |||||| ||||||||
Sbjct: 1 gtttttgtttgcaatgtttgaccactcgtcttattcaaatttttttttttgcaaatataa 60
Query: 95 aaaacgaaaagtt 107
|||||||||||||
Sbjct: 61 aaaacgaaaagtt 73
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||| ||||||||| ||||||||||| |||||||||
Sbjct: 165 tttttcttgcaacgtttgaccactcgccttattcaa 130
>RF01062;MIR812;AC144558.1/139667-139494 39947:Oryza sativa Japonica
Group
Length = 174
Score = 69.9 bits (35), Expect = 2e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa-ttgttttttacaaatatagaa 96
||||||||||| |||| ||| |||||||||||||| || || |||||| ||||| || ||
Sbjct: 1 gtttttgcttgtaacgtttggccactcgtcttatttaattttttttttgcaaatctaaaa 60
Query: 97 aacgaaaagttatgtttaa 115
||||||||||| |||||||
Sbjct: 61 aacgaaaagttgtgtttaa 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaat 76
|||||| ||| ||||| |||| |||||||||||||||||
Sbjct: 174 gtttttacttacaacgtttgatcactcgtcttattcaat 136
>RF01062;MIR812;AL663019.2/48460-48289 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 87/103 (84%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||| |||||||| |||| |||||||||||||||||| |||||| | |||||| |||||
Sbjct: 3 ttttgtttgcaacgtttgatcactcgtcttattcaatt-ttttttgctaatataaaaaac 61
Query: 100 gaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 62 aaaaagttgtgcttaaagtactgtagataataaagtaagtcac 104
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 69.9 bits (35), Expect = 2e-11
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgtt 80
|||||||| |||||| |||||||||||||| | |||| ||||||||||||| || |
Sbjct: 223 aatataagggattttgagtttttgcttgcacggtttgatcactcgtcttatttaaaaaat 164
Query: 81 ttttacaaatatagaaaacgaaaagttatgtttaa 115
|| | |||||||| |||||||||||||||| ||||
Sbjct: 163 ttgtgcaaatataaaaaacgaaaagttatgcttaa 129
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 4 tactcattccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccact 63
||||| ||||||| || |||||||| |||||| | ||||||||||| | |||||||||
Sbjct: 2 tactccttccgtcccataatataagggattttgaatttttgcttgcgttgtttgaccact 61
Query: 64 cgtcttatt 72
|||||||||
Sbjct: 62 cgtcttatt 70
>RF01062;MIR812;AACV01004534.1/3266-3096 39947:Oryza sativa Japonica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 88/105 (83%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| |||||||||||||||||| | | |||||| |||||||| |||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttattta--ttttttttgcaaatataaaaa 58
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 59 acgaaaagttgtgcttaaagtactgtagacaataaagtaagtcac 103
>RF01062;MIR812;AAAA02011350.1/21929-21758 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| |||| ||||| ||||||| |||| |||||| |||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgatcactcatcttatttaatt-ttttttgcaaatataaaaa 59
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 60 acgaaaagtt 69
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| |||||||| |||||||||||||||||||||
Sbjct: 172 gtttttgtttgcaacgtttgaccactcgtcttattcaa 135
>RF01062;MIR812;AACV01010498.1/7513-7684 39947:Oryza sativa Japonica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||| ||||| ||| |||||||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttacttacaacgtttggccactcgtcttattcagattttttttgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
>RF01062;MIR812;AAAA02025478.1/24577-24748 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| |||| |||| |||| ||||||||||||| || | |||||| |||||||| |||
Sbjct: 1 gttttttcttgtaacgtttgatcactcgtcttatttaaattttttttgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||| |||||||| ||||||||||||||||||
Sbjct: 172 gtttttacttgcaacatttgaccactcgtcttatt 138
>RF01062;MIR812;AAAA02011276.1/7207-7036 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| |||||||||||||| |||||| | |||||| |||||||| ||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtctcattcaaat-tttttttcaaatataaaag 59
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 60 acgaaaagtt 69
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||| |||| |||| ||||||||||||||||
Sbjct: 172 gtttttacttgtaacgtttgatcactcgtcttattcaa 135
>RF01062;MIR812;AAAA02004436.1/4027-4199 39946:Oryza sativa Indica
Group
Length = 173
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| |||||||||||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtcttattcaa 136
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 61 actcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
||||||||||||||||| |||||| |||||||| ||| |||||||| |||||||
Sbjct: 23 actcgtcttattcaatttttttttgcaaatataaaaacggaaaagttgtgtttaa 77
>RF01062;MIR812;AAAA02010926.1/12447-12618 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| |||| |||||||||||||||| | ||||| |||||||| |||
Sbjct: 1 gtttttgtttgtaacgtttgatcactcgtcttattcaaattatttttgcaaatata-aaa 59
Query: 98 acgaaaagttatgtttaa 115
||||||||||||| ||||
Sbjct: 60 acgaaaagttatgcttaa 77
>RF01062;MIR812;AC098598.2/95832-96004 39947:Oryza sativa Japonica
Group
Length = 173
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||||||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 173 gtttttgcttgcaacgtttgaccaatcgtcttattcaatttttttt 128
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| |||| | ||||||||||||||| ||| ||| ||||||| |||
Sbjct: 1 gtttttacttgcaacgtttgattattcgtcttattcaattttttattataaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
| ||||||| |||||||
Sbjct: 61 ataaaaagttgtgtttaa 78
>RF01062;MIR812;AC105768.2/60290-60126 39947:Oryza sativa Japonica
Group
Length = 165
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| ||||||| ||||||||||||| |||||| |||||||| |||
Sbjct: 1 gtttttgtttgtaacgtttgaccattcgtcttattcaaaatttttttgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
>RF01062;MIR812;AP003450.3/144108-144282 39947:Oryza sativa Japonica
Group
Length = 175
Score = 67.9 bits (34), Expect = 6e-11
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaa-ttgttttttacaaatatagaaaacgaaaa 104
|||||||| |||||||||||||||||| || || |||||| |||||||| ||||| ||||
Sbjct: 9 ttgcaacgtttgaccactcgtcttatttaattttttttttgcaaatataaaaaacaaaaa 68
Query: 105 gttatgtttaatatactctagggtataaagtaagtcac 142
||| || |||| |||| ||| ||||||||||||||
Sbjct: 69 gttgtgcttaaagtactgtagataataaagtaagtcac 106
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||||||||| ||||||||||||||||||
Sbjct: 174 tttttgcttgcaacgtttgaccactcgtcttatt 141
>RF01062;MIR812;AAAA02030638.1/19667-19840 39946:Oryza sativa Indica
Group
Length = 174
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 174 gtttttgcttgcaacgtttgatcactcgtcttattcaatttttttt 129
Score = 61.9 bits (31), Expect = 4e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa-ttgttttttacaaatatagaa 96
|||| ||||||||||| |||||||||||||||||||| || | |||| |||||||| ||
Sbjct: 1 gtttctgcttgcaacgtatgaccactcgtcttattcaatttatattttgcaaatataaaa 60
Query: 97 aacgaaaagtt 107
|| ||||||||
Sbjct: 61 aatgaaaagtt 71
>RF01062;MIR812;AAAA02008402.1/8990-9163 39946:Oryza sativa Indica
Group
Length = 174
Score = 67.9 bits (34), Expect = 6e-11
Identities = 89/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatat-agaa 96
|||||||||||||||| || || |||||| |||||||| | ||||||| |||||| | ||
Sbjct: 1 gtttttgcttgcaacgtttaactactcgttttattcaaattttttttataaatataaaaa 60
Query: 97 aacgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||| ||||||| ||||||| ||||| | | ||||||||||||||
Sbjct: 61 aacaaaaagttgtgtttaaaatactatggataataaagtaagtcac 106
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||| ||||||||| |||||||||||||||||| |||| |||||
Sbjct: 174 gttttttcttgcaacgtttgaccactcgtcttatttaatttttttt 129
>RF01062;MIR812;AP003753.3/5864-5694 39947:Oryza sativa Japonica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||||| | ||||||||||||||||||||| ||| || ||||||| |||
Sbjct: 1 gtttttgcttgcactgtttgaccactcgtcttattcaaaaaatttgtataaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
||||||||||||| ||||
Sbjct: 61 acgaaaagttatgcttaa 78
>RF01062;MIR812;AP003373.3/23023-22854 39947:Oryza sativa Japonica
Group
Length = 170
Score = 67.9 bits (34), Expect = 6e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||| || | ||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 1 gtttttgcttccactgtttgaccattcgtcttattcaaaaaatttgtacaaatatagaaa 60
Query: 98 acgaaaagttatgtttaa 115
||||||||||||| ||||
Sbjct: 61 acgaaaagttatgcttaa 78
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||||| | |||||||||||||||||||||
Sbjct: 170 gtttttacttgcactgtttgaccactcgtcttattcaa 133
>RF01058;MIR806;AACV01010328.1/26487-26725 39947:Oryza sativa
Japonica Group
Length = 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||
Sbjct: 231 tccgtctcataatataagggattttgagtttttgcttgcactctttgaccactcgtctta 172
Query: 71 tt 72
||
Sbjct: 171 tt 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||| | |||||||| ||||| | |||||||||||||||||||||
Sbjct: 19 aatataagggattctgagtttttgtttgcactgtttgaccactcgtcttattcaa 73
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa
Indica Group
Length = 241
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 22 atataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||| ||||||| |||||| | |||||||||||||||||||||
Sbjct: 20 atataagagattttgagttttttcttgcactgtttgaccactcgtcttattcaa 73
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtct 68
||||||||||||||| |||||||||||||| | ||||||||||||||
Sbjct: 223 aatataagagattttgagtttttgcttgcactgtttgaccactcgtct 176
>RF01062;MIR812;AAAA02021416.1/40369-40537 39946:Oryza sativa Indica
Group
Length = 169
Score = 65.9 bits (33), Expect = 3e-10
Identities = 85/97 (87%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
|||||||| ||||||||||||||||||||| | |||||| |||||||| |||||||||||
Sbjct: 9 ttgcaacg-ttgaccactcgtcttattcaaat-ttttttgcaaatata-aaaacgaaaag 65
Query: 106 ttatgtttaatatactctagggtataaagtaagtcac 142
|| || |||| |||| || | |||||||||||||||
Sbjct: 66 ttgtgcttaaagtactgta-gatataaagtaagtcac 101
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 46 ttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||||||||||||||||||||
Sbjct: 161 ttgcaacgtttgaccactcgtcttattcaa 132
>RF01062;MIR812;AAAA02014507.1/1802-1631 39946:Oryza sativa Indica
Group
Length = 172
Score = 65.9 bits (33), Expect = 3e-10
Identities = 79/93 (84%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttat 109
|||| |||||||||||| ||||| |||| |||||| |||| ||| ||||||||||||| |
Sbjct: 13 aacgtttgaccactcgttttatttaatt-ttttttgcaaacataaaaaacgaaaagttgt 71
Query: 110 gtttaatatactctagggtataaagtaagtcac 142
|||||| ||||| || ||||||||||||||
Sbjct: 72 gtttaaaatactatatataataaagtaagtcac 104
>RF01062;MIR812;AAAA02014561.1/38934-38770 39946:Oryza sativa Indica
Group
Length = 165
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaacgaaaagttatgttta 77
Query: 115 a 115
|
Sbjct: 78 a 78
>RF01062;MIR812;AC113333.2/54699-54527 39947:Oryza sativa Japonica
Group
Length = 173
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaa 98
||||||||| |||| |||||||||||| ||||| |||| |||||| |||||||| ||||
Sbjct: 2 tttttgcttataacgtttgaccactcgttttatttaatttttttttgcaaatataaaaaa 61
Query: 99 cgaaaagtt 107
| |||||||
Sbjct: 62 caaaaagtt 70
>RF01062;MIR812;AAAA02022102.1/84641-84470 39946:Oryza sativa Indica
Group
Length = 172
Score = 65.9 bits (33), Expect = 3e-10
Identities = 88/105 (83%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| |||||| ||||||||||| ||| |||||| ||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccgctcgtcttatttgatt-ttttttgtaaatataaaaa 59
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| || |||| ||||| ||| ||||| ||||||||
Sbjct: 60 acgaaaagttgtgcttaaaatactatagataataaattaagtcac 104
>RF01062;MIR812;AAAA02018583.1/14874-15047 39946:Oryza sativa Indica
Group
Length = 174
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaa-ttgttttttacaaatatagaaaa 98
||||| |||||||| ||||||| | ||||||||||| || ||||||||||||||| ||||
Sbjct: 3 ttttgattgcaacgtttgaccatttgtcttattcaattttttttttacaaatataaaaaa 62
Query: 99 cgaaaagtt 107
| |||||||
Sbjct: 63 caaaaagtt 71
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||| |||| |||||||||||||||||||||
Sbjct: 174 gtttttacttgaaacgtttgaccactcgtcttattcaa 137
>RF01062;MIR812;AAAA02019866.1/820-993 39946:Oryza sativa Indica
Group
Length = 174
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
||||||||||||| | ||||| ||||||||||||| |||| |||||| |||||||| ||
Sbjct: 1 gtttttgcttgcactgtttgactactcgtcttattcaaatttttttttgcaaatataaaa 60
Query: 97 aacgaaaag 105
|||||||||
Sbjct: 61 aacgaaaag 69
>RF01062;MIR812;AL662934.3/50208-50378 39947:Oryza sativa Japonica
Group
Length = 171
Score = 65.9 bits (33), Expect = 3e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 57 gaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgtttaat 116
||||||||||||||||||||| |||||| ||||||| |||| |||||||| || ||||
Sbjct: 20 gaccactcgtcttattcaatttttttttgcaaatatgaaaaatgaaaagttgtgcttaaa 79
Query: 117 atactctagggtataaagtaagtca 141
|||| ||| |||||||||||||
Sbjct: 80 gtactgtagataataaagtaagtca 104
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| |||||||| ||||||||| |||||||||||
Sbjct: 171 gtttttgtttgcaacgtttgaccacttgtcttattcaa 134
>RF01062;MIR812;AAAA02025488.1/32380-32208 39946:Oryza sativa Indica
Group
Length = 173
Score = 65.9 bits (33), Expect = 3e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
|||||||| |||||||||| ||||||| || | ||||| ||||||| |||||||||||
Sbjct: 9 ttgcaacgtttgaccactcttcttatttaaattatttttgtaaatataaaaaacgaaaag 68
Query: 106 ttatgtttaatatactctagggtataaagtaagtcac 142
|||||| ||| || || ||| ||||||||||||||
Sbjct: 69 ttatgtgtaaaatgctgtagataataaagtaagtcac 105
>RF01062;MIR812;AK289013.1/3852-4024 39947:Oryza sativa Japonica
Group
Length = 173
Score = 65.9 bits (33), Expect = 3e-10
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||||||||| ||||||||| |||||||| |||| |||||| |||||||| ||
Sbjct: 1 gtttttacttgcaacgtttgaccacttgtcttatttaatttttttttgcaaatataaaag 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|| |||| ||||| |||| ||| ||| ||||||||||||||
Sbjct: 61 acaaaaaattatgcttaaagtaccgtagataataaagtaagtcac 105
>RF01062;MIR812;AACV01021771.1/5496-5330 39947:Oryza sativa Japonica
Group
Length = 167
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| ||| || |||||||||||||||||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttgtataaatatagaaaacgaaaagttatgctta 77
Query: 115 a 115
|
Sbjct: 78 a 78
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || ||||||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 227 tccgtcccataatataacggattttgagtttttgcttgcactggttgaccactcgtctta 168
Query: 71 ttcaa 75
|||||
Sbjct: 167 ttcaa 163
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 37 agtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| ||||| | |||||||||||||||||||||
Sbjct: 27 agtttttgtttgcactgtttgaccactcgtcttattcaa 65
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||| || | ||||||||||||||||
Sbjct: 233 tccgtcccataatataagggattttgagtttttgcttacagtgtttgaccactcgtctta 174
Query: 71 ttcaa 75
|||||
Sbjct: 173 ttcaa 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||| || | |||||||||| |||||
Sbjct: 9 tccgtcccataatataagggattttaagtttttgcttacagtgtttgaccactcatctta 68
Query: 71 tt 72
||
Sbjct: 69 tt 70
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||| ||||| | ||||||||||||||||
Sbjct: 233 tccgtcccataatataagggattttgagtttttgtttgcactgtttgaccactcgtctta 174
Query: 71 ttcaa 75
|||||
Sbjct: 173 ttcaa 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||| ||||| ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgtttgcactatttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||||||| | | ||||||||||||||||
Sbjct: 232 tccgtcccataatataagggattttgagtttttgcttactttgtttgaccactcgtctta 173
Query: 71 ttcaattgttttttacaaatatagaaaacgaaaagtt 107
||||| ||| | |||||||| |||||||||||||
Sbjct: 172 ttcaaaaaatttgtgcaaatataaaaaacgaaaagtt 136
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| ||||| |||||||||||||| || |||||||||| |||||
Sbjct: 9 tccgtcccataatataagggatttggagtttttgcttgcaccgtttgaccactcatctta 68
Query: 71 tt 72
||
Sbjct: 69 tt 70
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||||| ||||||| |||||| |||||||| ||||| | ||||||||||||||||
Sbjct: 9 tccgtctcatgatataagggattttgagtttttgtttgcactgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| ||| | | ||||||||||||||||
Sbjct: 233 tccgtcccataatataagggattttaagtttttacttatactgtttgaccactcgtctta 174
Query: 71 ttcaa 75
|||||
Sbjct: 173 ttcaa 169
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| | |||||||||||| | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgactttttgcttgcactgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| | | |||||||||| | ||||||||| ||||||
Sbjct: 227 tccgtcccataatataagggattttgactatttgcttgcactgtttgaccacttgtctta 168
Query: 71 ttcaa 75
|||||
Sbjct: 167 ttcaa 163
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||||| | ||||| ||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgcacggtttgactactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| | | ||||||||||||||||
Sbjct: 234 tccgtcccataatataagggattttgagtttttgcttgtagtgtttgaccactcgtctta 175
Query: 71 ttcaa 75
|||||
Sbjct: 174 ttcaa 170
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| | |||||||||||| | ||||||||||||||||
Sbjct: 235 tccgtcccataatataagggattttgactttttgcttgcactgtttgaccactcgtctta 176
Query: 71 ttcaa 75
|||||
Sbjct: 175 ttcaa 171
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||||||| | | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgcttgtattgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||| || | | ||||||||||||||||
Sbjct: 236 tccgtcccataatataagggattttgagtttttgtttagattgtttgaccactcgtctta 177
Query: 71 ttcaa 75
|||||
Sbjct: 176 ttcaa 172
>RF01062;MIR812;AAAA02006096.1/10115-10287 39946:Oryza sativa Indica
Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||| |||| |||||| | ||||||||||||||| |||||||||| || || |||
Sbjct: 18 ttgaccacttgtctcattcaaattttttttacaaatataaaaaacgaaaaattgtgctta 77
Query: 115 atatactctagggtataaagtaagtcac 142
| |||| ||| ||||||||||||||
Sbjct: 78 aagtactgtagatgataaagtaagtcac 105
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| ||| |||| |||||||||||||||||||||
Sbjct: 173 gtttttgtttgtaacgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AAAA02013220.1/9377-9208 39946:Oryza sativa Indica
Group
Length = 170
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||||||||| | ||||||||||||||||||||| ||| | |||||||| |||||
Sbjct: 3 ttttgcttgcactgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaac 62
Query: 100 gaaaagttatgtttaa 115
||||||||||| ||||
Sbjct: 63 gaaaagttatgcttaa 78
>RF01062;MIR812;AAAA02014116.1/9970-10142 39946:Oryza sativa Indica
Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
|||| ||||||||| ||||||| ||||||||||||| |||| | |||||||| |||||
Sbjct: 3 tttttcttgcaacgtttgaccattcgtcttattcaaaaattttgtgcaaatataaaaaac 62
Query: 100 gaaaagttatgtttaa 115
||||| || |||||||
Sbjct: 63 gaaaacttgtgtttaa 78
>RF01062;MIR812;AACV01007529.1/6429-6597 39947:Oryza sativa Japonica
Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| | | ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1 gtttttgcttgtactgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtca 141
|||||||||| || ||||| |||| ||| |||||||||||||
Sbjct: 61 acgaaaagttgtgcttaatgtactttagataataaagtaagtca 104
>RF01062;MIR812;ABRL01000707.1/2129-1958 65489:Oryza barthii
Length = 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||| |||||| | |||||||||| ||||||| || | ||||||||||||||| |||||
Sbjct: 3 ttttgtttgcaatgtttgaccactcatcttatttaaat-ttttttacaaatataaaaaac 61
Query: 100 gaaaagtt 107
||||||||
Sbjct: 62 gaaaagtt 69
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||||||||| ||||||||||||||||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AL731589.3/75309-75482 39947:Oryza sativa Japonica
Group
Length = 174
Score = 63.9 bits (32), Expect = 1e-09
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
||||||| ||| |||| ||||||||||||||||||| |||| |||||| |||||||| ||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttattcaaatttttttttgcaaatataaaa 60
Query: 97 aacg 100
||||
Sbjct: 61 aacg 64
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| ||| |||| |||||||||||||||||||||
Sbjct: 174 gtttttgattgtaacgattgaccactcgtcttattcaa 137
>RF01062;MIR812;AP008210.1/2457757-2457587 39947:Oryza sativa
Japonica Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaatt 77
|||||||||||||||| |||| ||||||||||||||||||
Sbjct: 171 gtttttgcttgcaacgtttgatcactcgtcttattcaatt 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/78 (83%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| |||| |||| ||||||||| ||||||||||| | || ||| ||||||| |||
Sbjct: 1 gtttttacttgtaacgtttgaccactagtcttattcaaattttcttt--aaatataaaaa 58
Query: 98 acgaaaagttatgtttaa 115
| ||||| ||||| ||||
Sbjct: 59 atgaaaaattatgcttaa 76
>RF01062;MIR812;AP008208.1/35433406-35433578 39947:Oryza sativa
Japonica Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
|||||||||||| | ||||| | |||||||||| || | ||||||||||||||| |||||
Sbjct: 3 ttttgcttgcaatgtttgactattcgtcttatttaaattttttttacaaatatacaaaac 62
Query: 100 gaaaagtt 107
|||||||
Sbjct: 63 aaaaagtt 70
>RF01062;MIR812;AAAA02019003.1/8410-8580 39946:Oryza sativa Indica
Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| |||| ||| |||||||||| || ||||| |||||||| |||
Sbjct: 1 gtttttgattgcaacgtttgattacttgtcttattcattt--tttttgcaaatataaaaa 58
Query: 98 acgaaaagttatgtttaa 115
||||||||||||| ||||
Sbjct: 59 acgaaaagttatgcttaa 76
>RF01062;MIR812;AAAA02007251.1/7007-6836 39946:Oryza sativa Indica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaat 76
|||||||||| ||||| ||||||||||||||||||||||
Sbjct: 172 gtttttgcttacaacgtttgaccactcgtcttattcaat 134
Score = 44.1 bits (22), Expect = 0.001
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 58 accactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgtttaa 115
||||||||||||||| || |||||| |||||||| ||| |||||||||||| ||||
Sbjct: 21 accactcgtcttatttaaaattttttt-caaatataaaaagcgaaaagttatgcttaa 77
>RF01062;MIR812;AP004738.3/117852-117676 39947:Oryza sativa Japonica
Group
Length = 177
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgtttt 82
|||||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 175 ttttgcttgcaatgtttgaccactcgtcttattcaattttttt 133
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| |||||||| |||| |||||||||||||||| | |||||| |||||||| ||
Sbjct: 1 gtttttgtttgcaacgtttgatcactcgtcttattcaaat-tttttttcaaatataaaac 59
Query: 98 acgaaaagtt 107
|||||||||
Sbjct: 60 ccgaaaagtt 69
>RF01062;MIR812;AP005098.4/149489-149327 39947:Oryza sativa
Japonica Group
Length = 163
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||||||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||| |||| ||||||||| |||||||||||
Sbjct: 163 gtttttgcttttaacgtttgaccacttgtcttattcaa 126
>RF01062;MIR812;AACV01002952.1/2774-2943 39947:Oryza sativa Japonica
Group
Length = 170
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
|||||||| | || ||||||||||||||| || ||||| |||||||| |||| ||||||
Sbjct: 9 ttgcaacgttcgatcactcgtcttattcattt--tttttgcaaatataaaaaatgaaaag 66
Query: 106 ttatgtttaa 115
||||||||||
Sbjct: 67 ttatgtttaa 76
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgtttt 82
|||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 168 ttttgcttgcaacgtttgaccactcgtcttactcaattttttt 126
>RF01062;MIR812;AAAA02002384.1/5529-5357 39946:Oryza sativa Indica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| || | ||||||||||||||||||||| | |||||| ||||||| |||
Sbjct: 1 gtttttgtttgtaatgtttgaccactcgtcttattcaaatattttttttaaatataaaaa 60
Query: 98 acgaaaa 104
|||||||
Sbjct: 61 acgaaaa 67
>RF01062;MIR812;AC134045.2/54140-54311 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatata 93
||||||| ||||||||||||||| |||||||||||||||
Sbjct: 18 ttgaccattcgtcttattcaatttttttttacaaatata 56
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgtt 80
|||||||| |||||| ||||||||||| || ||||||||||||||||||||| |
Sbjct: 218 aatataagggattttgagtttttgcttacacactttgaccactcgtcttattcaaaaaat 159
Query: 81 ttttacaaatatagaaaacgaaaagtt 107
|| | |||||||| |||||||||||||
Sbjct: 158 ttatgcaaatataaaaaacgaaaagtt 132
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||||| |||||||| ||||| | ||||| |||||||||||||||
Sbjct: 19 aatataagggattttgagtttttgtttgcactgtttgactactcgtcttattcaa 73
>RF01058;MIR806;AACV01023803.1/7242-7003 39947:Oryza sativa Japonica
Group
Length = 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatata 93
||||||| ||||||||||||||| |||||||||||||||
Sbjct: 189 ttgaccattcgtcttattcaatttttttttacaaatata 151
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 61.9 bits (31), Expect = 4e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgtt 80
|||||||| |||||| | ||||||||||| | |||||||||||||||||| || ||
Sbjct: 224 aatataagggattttgacattttgcttgcactgtttgaccactcgtcttatttaaaaatt 165
Query: 81 ttttacaaatatagaaaacgaaaagtt 107
|| | |||||||| |||||||||||||
Sbjct: 164 ttgtgcaaatataaaaaacgaaaagtt 138
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 18 cacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||||| |||||| |||||||||||| | | ||||||||||||||||||
Sbjct: 16 cacaatataagggattttgagtttttgcttgtagtgtttgaccactcgtcttatt 70
Score = 48.1 bits (24), Expect = 6e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgtt 80
|||||||| |||||| |||||| |||| | | ||||||||| ||||||||||| |
Sbjct: 220 aatataagggattttgggtttttacttgtagtgtttgaccacttgtcttattcaaaaaat 161
Query: 81 ttttacaaatatagaaaacgaaaa 104
|| |||||||||| ||||||||||
Sbjct: 160 ttatacaaatataaaaaacgaaaa 137
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 61.9 bits (31), Expect = 4e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgtt 80
|||||||| ||||| |||||||| ||||| | ||||||||||||||||||||| |
Sbjct: 225 aatataaggaattttgagtttttgtttgcactgtttgaccactcgtcttattcaaaaaat 166
Query: 81 ttttacaaatatagaaaacgaaaagtt 107
|| | |||||||| |||||||||||||
Sbjct: 165 ttgtgcaaatataaaaaacgaaaagtt 139
Score = 58.0 bits (29), Expect = 6e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
||||||| | |||||||| |||||| ||||||||||| | | ||||||||||||||||
Sbjct: 9 tccgtctaataatataagggattttgagtttttgcttatactgtttgaccactcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01062;MIR812;AAAA02003196.1/32277-32449 39946:Oryza sativa
Indica Group
Length = 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgagcactcgtcttattcaa 38
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| || |||||||||||||||||||||
Sbjct: 173 gtttttgcttgcagcgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AAAA02031122.1/7716-7886 39946:Oryza sativa Indica
Group
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| |||||||| |||||||||||||||||||||
Sbjct: 171 gtttttgtttgcaacgtttgaccactcgtcttattcaa 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||| ||||||||| |||||||||||||||||| |||| |||||
Sbjct: 3 tttttcttgcaacgtttgaccactcgtcttatttaatttttttt 46
>RF01062;MIR812;AAAA02008634.1/17996-17821 39946:Oryza sativa Indica
Group
Length = 176
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||| |||| |||||||||||||||||||||
Sbjct: 176 gtttttgcttgtaacgtttgaccactcgtcttattcaa 139
Score = 54.0 bits (27), Expect = 1e-06
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| || |||| |||||||||||| | |||||| |||||||| |||
Sbjct: 1 gtttttgtttgtaacgtttaaccagtcgtcttattca--ttttttttgcaaatataaaaa 58
Query: 98 acgaaaagttatgtttaa 115
|| |||||||||| ||||
Sbjct: 59 acaaaaagttatgcttaa 76
>RF01062;MIR812;AC118340.1/59212-59371 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattc-aattgttttttacaaatatagaa 96
|||||| |||| |||| ||||||| ||||||||||| || | |||||| |||||||| ||
Sbjct: 1 gtttttacttgtaacgtttgaccattcgtcttattcaaacttttttttgcaaatataaaa 60
Query: 97 aacgaaaagttatg 110
||| ||||||||||
Sbjct: 61 aacaaaaagttatg 74
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||| ||||||||| |||||||||||||||||| |||| |||||
Sbjct: 160 gtttttacttgcaacgtttgaccactcgtcttatttaatttttttt 115
>RF01062;MIR812;AAAA02014521.1/2699-2528 39946:Oryza sativa Indica
Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaa 104
||||||||||||||||||||||| |||||| |||||||| ||||| ||||
Sbjct: 18 ttgaccactcgtcttattcaatt-tttttttcaaatataaaaaacaaaaa 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||| |||||||||||||| ||||||
Sbjct: 170 ttttgcttgcaacgtttgaccactcgtctcattcaa 135
>RF01062;MIR812;AACV01004632.1/2862-2689 39947:Oryza sativa Japonica
Group
Length = 174
Score = 60.0 bits (30), Expect = 2e-08
Identities = 88/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa-ttgttttttacaaatatagaa 96
|||||| | ||||||| |||||||||||||||||| || || |||||| ||| |||| ||
Sbjct: 1 gtttttacatgcaacgtttgaccactcgtcttatttaattttttttttgcaagtataaaa 60
Query: 97 aacgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
||| ||||||| || |||| ||||| ||| ||||||| ||||||
Sbjct: 61 aacaaaaagttgtgcttaaaatactgtagataataaagtgagtcac 106
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||| ||||| ||||| |||||||||||||||
Sbjct: 173 tttttgctttcaacgtttgactactcgtcttattcaa 137
>RF01062;MIR812;AAAA02011062.1/27832-28005 39946:Oryza sativa Indica
Group
Length = 174
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaa-ttgttttttacaaatatagaaaacgaaaagtt 107
||||||||| ||||||||||| || |||||| |||||||| |||||||||||||
Sbjct: 18 ttgaccacttgtcttattcaattttttttttgcaaatataaaaaacgaaaagtt 71
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||| ||||| |||||||||||||||||||||
Sbjct: 174 gtttttgcttacaacgtttgaccactcgtcttattcaa 137
>RF01062;MIR812;AAAA02031277.1/7485-7316 39946:Oryza sativa Indica
Group
Length = 170
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| ||||||||| |||||||||||||||||||||
Sbjct: 170 gtttttacttgcaacgtttgaccactcgtcttattcaa 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||| ||||| ||||||||||||||||||
Sbjct: 1 gtttttgctagcaacatttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02029081.1/4555-4382 39946:Oryza sativa Indica
Group
Length = 174
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||| | |||||||||||||||||||||
Sbjct: 174 gtttttgcttgcaatgtttgaccactcgtcttattcaa 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtctta-ttcaattgttttttacaaatatagaa 96
||||||||||| |||| |||||||||||||||| || |||| ||||| |||||||| ||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatttaaatttatttttgcaaatatacaa 60
Query: 97 aacgaaaa 104
||| ||||
Sbjct: 61 aacaaaaa 68
>RF01062;MIR812;AACV01000006.1/18111-18284 39947:Oryza sativa
Japonica Group
Length = 174
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattc-aattgttttttacaaatatagaaaacgaaaagtt 107
||||||||||||||||||| |||| || |||| ||||||| |||||||||||||
Sbjct: 19 ttgaccactcgtcttattcaaatttttctttataaatataaaaaacgaaaagtt 72
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||| ||| |||||||||||||||||||||
Sbjct: 174 gtttttgcttataacatttgaccactcgtcttattcaa 137
>RF01062;MIR812;AP006554.2/116160-116331 39947:Oryza sativa Japonica
Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||||| | ||||||| ||||||||||||||| | |||| |||||||| |||
Sbjct: 1 gtttttgcttgcaatgtttgaccattcgtcttattcaatt-tattttgcaaatataaaaa 59
Query: 98 acgaaaagtt 107
| |||||||
Sbjct: 60 ataaaaagtt 69
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| ||||| |||| ||||||||||||||||
Sbjct: 170 ttttgcttacaacgtttgatcactcgtcttattcaa 135
>RF01062;MIR812;DJ347888.1/191-351 4530:Oryza sativa (rice)
Length = 161
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| ||||||||| |||||||||||
Sbjct: 161 gtttttgcttgcaacgtttgaccacttgtcttattcaa 124
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaa 104
||||| || ||||||||||||| ||||||| |||||| |||||||| ||||||||||
Sbjct: 5 ttgcagcgtttgaccactcgtcatattcaaaaattttttgcaaatataaaaaacgaaaa 63
>RF01062;MIR812;AAAA02004615.1/12774-12603 39946:Oryza sativa Indica
Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| |||| |||||||||||||||||| || | ||||||| ||||||| |||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttatttaaatattttttataaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
| ||| ||| |||||||
Sbjct: 61 ataaaatgttgtgtttaa 78
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttt 83
|||||| |||||||| |||| |||||||||||||||||| |||||
Sbjct: 172 gtttttacttgcaacatttgatcactcgtcttattcaatttttttt 127
>RF01062;MIR812;AACV01021379.1/7107-6943 39947:Oryza sativa Japonica
Group
Length = 165
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaa 104
||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 18 ttgaccactcgtcttattcaaaaattttgtgcaaatatagaaaacgaaaa 67
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||| | | |||||||||||||||||||||
Sbjct: 165 gtttttgcttgtactgtttgaccactcgtcttattcaa 128
>RF01062;MIR812;AAAA02021140.1/3763-3594 39946:Oryza sativa Indica
Group
Length = 170
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| |||||||||| ||||||||||
Sbjct: 170 gtttttgcttgcaacgtttgaccactcatcttattcaa 133
Score = 54.0 bits (27), Expect = 1e-06
Identities = 86/105 (81%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| ||| ||||||||| ||||||| |||| ||||| ||||||| |||
Sbjct: 1 gtttttgcttgtaacatctgaccactcatcttatttaatttttttt---aaatataaaaa 57
Query: 98 acgaaaagttatgtttaatatactctagggtataaagtaagtcac 142
|||||||||| || |||| |||| ||| ||||||||||||||
Sbjct: 58 acgaaaagttgtgcttaaagtactgtagataataaagtaagtcac 102
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 91/110 (82%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 12 ccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttat 71
||||| || |||||||| |||||| |||||||| ||| | | |||||||||||||||||
Sbjct: 231 ccgtcccataatataagggattttgagtttttggttgaactgtttgaccactcgtcttat 172
Query: 72 tcaattgttttttacaaatatagaaaacgaaaagttatgtttaatatact 121
| || ||| | |||||||| |||||||||||||||| |||| |||||
Sbjct: 171 t-aaaaaatttgtgcaaatataaaaaacgaaaagttatgcttaaaatact 123
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||||| |||||||| ||| | | |||||||||||||||||||||
Sbjct: 19 aatataagggattttgagtttttgtttgaactgtttgaccactcgtcttattcaa 73
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaa 104
||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 180 ttgaccactcgtcttattcaaaaattttgtgcaaatatagaaaacgaaaa 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| ||||||| |||| | | ||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgagttttt-cttgtactgtttgaccactcgtctta 67
Query: 71 ttcaa 75
|||||
Sbjct: 68 ttcaa 72
>RF00906;MIR1122;AL731617.3/71366-71211 39947:Oryza sativa Japonica
Group
Length = 156
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| ||||||||||| ||||| | |||||| ||| |||| ||||||||||||||||
Sbjct: 145 tccgtcccacaatataaggaattttgattttttgtttgtaacgtttgaccactcgtctta 86
Query: 71 tt 72
||
Sbjct: 85 tt 84
>RF01062;MIR812;AACV01023991.1/981-810 39947:Oryza sativa Japonica
Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgtttt 82
|||||||||| ||||| || |||||||||||||||||||| ||||
Sbjct: 1 gtttttgcttacaacgtttaaccactcgtcttattcaattttttt 45
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||| ||| |||||||||||||||||||||
Sbjct: 172 gtttttgcttgtaacatttgaccactcgtcttattcaa 135
>RF01062;MIR812;AAAA02014507.1/22435-22605 39946:Oryza sativa Indica
Group
Length = 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttgtgcaaatatagaaaacgaaaagtt 70
>RF01062;MIR812;AAAA02004443.1/24290-24120 39946:Oryza sativa Indica
Group
Length = 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||| ||| ||||| |||||||||||||||||||| | |||||| ||||||| |||
Sbjct: 1 gtttttccttacaacgtttgaccactcgtcttattca--ttttttttgtaaatataaaaa 58
Query: 98 acgaaaagttat 109
| ||||||||||
Sbjct: 59 atgaaaagttat 70
>RF01062;MIR812;ABRL01000119.1/394-558 65489:Oryza barthii
Length = 165
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| | |||||||||||||||||||||
Sbjct: 2 tttttgcttgcaatgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02021186.1/45161-45331 39946:Oryza sativa Indica
Group
Length = 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattca 74
||||||||||| ||||||| |||||||||||||||||
Sbjct: 171 gtttttgcttgtaacgcttaaccactcgtcttattca 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||| |||||||| || ||||||||||||||| || | | |||| |||||||| |||||
Sbjct: 3 ttttgtttgcaacgtttaaccactcgtcttatttaaat-tcttttgcaaatataaaaaac 61
Query: 100 gaaaagtt 107
||||||||
Sbjct: 62 gaaaagtt 69
>RF01062;MIR812;AAAA02019268.1/24495-24327 39946:Oryza sativa Indica
Group
Length = 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| ||| | |||||||| |||||||||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaacgaaaagttatgctta 77
Query: 115 a 115
|
Sbjct: 78 a 78
>RF01062;MIR812;AAAA02034457.1/5030-5202 39946:Oryza sativa Indica
Group
Length = 173
Score = 58.0 bits (29), Expect = 6e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaa 98
||||| ||| ||||| |||| || ||||||||||||| ||| |||||||||| ||||
Sbjct: 2 tttttactttcaacgtttgatcattcgtcttattcaaaaaatttatacaaatataaaaaa 61
Query: 99 cgaaaagttatgtttaa 115
|||||||||||| ||||
Sbjct: 62 cgaaaagttatgcttaa 78
>RF01062;MIR812;AACV01006891.1/63505-63334 39947:Oryza sativa
Japonica Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
||||||||||||||||||||| | |||||| || ||||| |||||||| ||||
Sbjct: 18 ttgaccactcgtcttattcaaattttttttgcagatataaaaaacgaatagtt 70
>RF01062;MIR812;AAAA02006808.1/23504-23678 39946:Oryza sativa Indica
Group
Length = 175
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||| |||| |||||||||||||||||||||
Sbjct: 174 tttttgcttgtaacgtttgaccactcgtcttattcaa 138
>RF01062;MIR812;AACV01023883.1/2067-2235 39947:Oryza sativa Japonica
Group
Length = 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| || |||||||||| |||||||||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcaaaaaaattgtacaaatataaaaaacgaaaagttatgctta 77
Query: 115 a 115
|
Sbjct: 78 a 78
>RF01062;MIR812;AP003704.3/7695-7526 39947:Oryza sativa Japonica
Group
Length = 170
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattca 74
||||||||||||| || ||||||||||||||||||||
Sbjct: 170 gtttttgcttgcaccgtttgaccactcgtcttattca 134
>RF01062;MIR812;AAAA02008540.1/15529-15363 39946:Oryza sativa Indica
Group
Length = 167
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||||||||||||||||| || ||| |||||||||| |||||||||||||||| |||
Sbjct: 15 ttgaccactcgtcttatttaaaaaatttatacaaatataaaaaacgaaaagttatgctta 74
Query: 115 a 115
|
Sbjct: 75 a 75
>RF01062;MIR812;AACV01002654.1/12821-12650 39947:Oryza sativa
Japonica Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 78/93 (83%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttat 109
|||| |||||||||||| ||||| |||| |||||| |||| ||| ||||||||||||| |
Sbjct: 13 aacgtttgaccactcgttttatttaatt-tttttttcaaaaataaaaaacgaaaagttgt 71
Query: 110 gtttaatatactctagggtataaagtaagtcac 142
| |||| | ||| ||| ||||||||||||||
Sbjct: 72 gcttaaaacactgtagataataaagtaagtcac 104
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||||||| |||||||||||||||||||||
Sbjct: 172 gttttttcttgcaacatttgaccactcgtcttattcaa 135
>RF01062;MIR812;AY749282.1/500-327 40149:Oryza meridionalis
Length = 174
Score = 58.0 bits (29), Expect = 6e-08
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtc--ttattcaattgttttttacaaatataga 95
||||||||||| |||| ||||||||||||| ||||||| || |||||| ||||||| |
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttttattcattttttttttgtaaatata-a 59
Query: 96 aaacgaaaagtt 107
||||||||||||
Sbjct: 60 aaacgaaaagtt 71
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||| ||||| |||||||||||| |||||
Sbjct: 173 tttttgcttacaacgtttgaccactcgttttatt 140
>RF01062;MIR812;AACV01012074.1/7964-7793 39947:Oryza sativa Japonica
Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaa 98
|||||||||||| | ||||||||||||||||||||| ||| | |||||||| ||||
Sbjct: 2 tttttgcttgcattgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaa 61
Query: 99 cgaaaagtt 107
|||||||||
Sbjct: 62 cgaaaagtt 70
>RF01062;MIR812;AAAA02030866.1/12688-12519 39946:Oryza sativa Indica
Group
Length = 170
Score = 58.0 bits (29), Expect = 6e-08
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 46 ttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaag 105
|||||||| |||| |||||||||||||||| | |||| |||||||| ||||| |||||
Sbjct: 9 ttgcaacgtttgatcactcgtcttattcaaaattcttttgcaaatataaaaaacaaaaag 68
Query: 106 ttatgtttaatatactctagggtataaagtaagtcac 142
|| || |||| |||| ||| ||||||||||||||
Sbjct: 69 ttgtgcttaagttactgtagataataaagtaagtcac 105
>RF01062;MIR812;AAAA02034956.1/41821-41993 39946:Oryza sativa Indica
Group
Length = 173
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||||||||||||||||||||| ||| | |||||||| |||| ||||||||||||||
Sbjct: 18 ttgaccactcgtcttattcaataaatttgtgcaaatataaaaaataaaaagttatgttta 77
Query: 115 a 115
|
Sbjct: 78 a 78
>RF01062;MIR812;AACV01025949.1/8418-8245 39947:Oryza sativa Japonica
Group
Length = 174
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
||||||||||||||||||||| | |||||| ||||||| |||| ||||||||
Sbjct: 18 ttgaccactcgtcttattcaaattttttttgtaaatataaaaaatgaaaagtt 70
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgtttttt 84
||||||| |||||||| |||||||||||| ||||||| || ||||||
Sbjct: 174 gtttttgtttgcaacgtttgaccactcgttttattcatttttttttt 128
>RF01062;MIR812;AACV01016979.1/4172-4005 39947:Oryza sativa Japonica
Group
Length = 168
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||||||||||| |||||||| ||| |||||||||| |||||||||||||||| |||
Sbjct: 18 ttgaccactcgttttattcaaaaaatttgtacaaatataaaaaacgaaaagttatgctta 77
Query: 115 a 115
|
Sbjct: 78 a 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||||||| | ||||||||||||||||||
Sbjct: 168 gtttttgcttgcactgtttgaccactcgtcttatt 134
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 58.0 bits (29), Expect = 6e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || ||||||| |||||| |||||||||||||| | |||||||||||| |||
Sbjct: 231 tccgtcccataatataaaggattttgagtttttgcttgcactgtttgaccactcgtttta 172
Query: 71 ttcaa 75
|||||
Sbjct: 171 ttcaa 167
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 58.0 bits (29), Expect = 6e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || ||||||||||||||| | |||||| ||| | | ||||||||||||||||
Sbjct: 236 tccgtcccataatataagagattttgattttttgtttgtaccatttgaccactcgtctta 177
Query: 71 ttcaa 75
|||||
Sbjct: 176 ttcaa 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| | |||||||||||| | | ||||| ||||||||
Sbjct: 9 tccgtcccataatataagggattttgattttttgcttgcactgttcgaccattcgtctta 68
Query: 71 ttcaa 75
|||||
Sbjct: 69 ttcaa 73
>RF01058;MIR806;AACV01026200.1/8692-8927 39947:Oryza sativa Japonica
Group
Length = 236
Score = 58.0 bits (29), Expect = 6e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 11 tccgtctcacaatataagagattttcagtttttgcttgcaacgcttgaccactcgtctta 70
|||||| || |||||||| |||||| |||||||| || || | ||||||||||||||||
Sbjct: 228 tccgtcccataatataagggattttgagtttttgtttacactgtttgaccactcgtctta 169
Query: 71 ttcaa 75
|||||
Sbjct: 168 ttcaa 164
>RF01062;MIR812;AACV01025331.1/33364-33536 39947:Oryza sativa
Japonica Group
Length = 173
Score = 56.0 bits (28), Expect = 2e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||| | | ||||||| ||||||| |||| ||||||| || |||
Sbjct: 18 ttgaccactcgtcttattctaattttttttataaatataaaaaataaaaagttgtgctta 77
Query: 115 atatactctagggtataaagtaagtcac 142
| |||| ||| ||||||||||||||
Sbjct: 78 aagtactatagataataaagtaagtcac 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||| ||||||||| |||| ||||||||||||||||
Sbjct: 172 ttttttcttgcaacgtttgatcactcgtcttattcaa 136
>RF01062;MIR812;AACV01010066.1/9500-9324 39947:Oryza sativa Japonica
Group
Length = 177
Score = 56.0 bits (28), Expect = 2e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| ||| | |||||||| ||||||||||||| || |||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaacgaaaagttgtgctta 77
Query: 115 atatactctagggtataaagtaag 138
| |||| |||| ||||||||||
Sbjct: 78 aagtactttaggtaataaagtaag 101
>RF01062;MIR812;AAAA02021046.1/1401-1562 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
|||| |||||| || || |||||||||||||||||| ||| | |||||||| |||||
Sbjct: 3 tttttcttgcaccgtttcaccactcgtcttattcaaaaaatttgtgcaaatataaaaaac 62
Query: 100 gaaaagttatgtttaa 115
||||||||||| ||||
Sbjct: 63 gaaaagttatgcttaa 78
>RF01062;MIR812;AACV01015146.1/17582-17413 39947:Oryza sativa
Japonica Group
Length = 170
Score = 56.0 bits (28), Expect = 2e-07
Identities = 60/70 (85%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| |||||||||||||||||| | || ||||| ||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatttactttttttt---aaatataaaaa 57
Query: 98 acgaaaagtt 107
|| |||||||
Sbjct: 58 acaaaaagtt 67
>RF01062;MIR812;AACV01009271.1/10556-10725 39947:Oryza sativa
Japonica Group
Length = 170
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaattgtttt 82
|||||| |||||||| |||||| |||||||||||||||| ||||
Sbjct: 169 tttttgtttgcaacgtttgacctctcgtcttattcaattttttt 126
Score = 54.0 bits (27), Expect = 1e-06
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtctta-ttcaattgttttttacaaatatagaaaacgaaaagtta 108
|||| |||||||||||||||| || |||| |||||| |||||||| |||| |||||||
Sbjct: 13 aacgtttgaccactcgtcttatttaaatttttttttgcaaatataaaaaataaaaagttg 72
Query: 109 tgtttaa 115
|||||||
Sbjct: 73 tgtttaa 79
>RF01062;MIR812;AACV01003822.1/5854-6022 39947:Oryza sativa Japonica
Group
Length = 169
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||| ||||||||| |||||||||||||||||||||
Sbjct: 167 ttttacttgcaacgtttgaccactcgtcttattcaa 132
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||||||||||||| || |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AACV01001491.1/2069-2243 39947:Oryza sativa Japonica
Group
Length = 175
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||| |||||||| |||| ||||||| ||||| || | ||||||||||||||| ||||
Sbjct: 3 ttttgattgcaacgtttgaacactcgttttatttaaattttttttacaaatataaaaaat 62
Query: 100 gaaaagtt 107
|||||||
Sbjct: 63 aaaaagtt 70
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 55 ttgaccactcgtcttattcaattgtttttt 84
|||||||||||||||||| |||| ||||||
Sbjct: 158 ttgaccactcgtcttattaaattttttttt 129
>RF01062;MIR812;AAAA02015781.1/367-537 39946:Oryza sativa Indica
Group
Length = 171
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 49 caacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaa 104
||||| || |||||||||||||||||| | |||||| |||||||| ||||||||||
Sbjct: 12 caacgtttaaccactcgtcttattcaaat-ttttttgcaaatataaaaaacgaaaa 66
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| ||||||| |||||||||||||||||||||
Sbjct: 170 tttttgtttgcaacatttgaccactcgtcttattcaa 134
>RF01062;MIR812;AAAA02017733.1/16042-16214 39946:Oryza sativa Indica
Group
Length = 173
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||| || | |||||||||||| ||||| || | | |||| |||||||| |||
Sbjct: 1 gtttttgattgtaatgtttgaccactcgttttatttaaatttgttttgcaaatataaaaa 60
Query: 98 acgaaaagttat 109
||||||||||||
Sbjct: 61 acgaaaagttat 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
|||||| ||||||||| |||||||||||| |||||
Sbjct: 173 gtttttacttgcaacgtttgaccactcgttttatt 139
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 40 ttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaac 99
||||||||||| | ||||||||||||||||||||| ||| | |||||||| |||||
Sbjct: 206 ttttgcttgcactgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaac 147
Query: 100 gaaaagtt 107
||||||||
Sbjct: 146 gaaaagtt 139
>RF01062;MIR812;AAAA02011985.1/3215-3046 39946:Oryza sativa Indica
Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||| |||||||||||||||| ||| | |||||||| |||||||||||||||| |||
Sbjct: 18 ttgatcactcgtcttattcaaaaaatttatgcaaatataaaaaacgaaaagttatgctta 77
Query: 115 atatact 121
| |||||
Sbjct: 78 aaatact 84
>RF01062;MIR812;AAAA02010584.1/17577-17417 39946:Oryza sativa Indica
Group
Length = 161
Score = 54.0 bits (27), Expect = 1e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||||||||||||||||||| ||| | |||||||| ||||||||||||| || |||
Sbjct: 12 ttgaccactcgtcttattcagaaaatttgtgcaaatataaaaaacgaaaagttgtgctta 71
Query: 115 atatactctagggtataaagtaagtca 141
|| |||| ||| |||||||||||||
Sbjct: 72 atgtactttagataataaagtaagtca 98
>RF01062;MIR812;AP003347.3/33179-33351 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
||||||| |||||||| ||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP005698.3/85213-85385 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgtttttt 84
|||||||||| ||||| ||||| |||| |||||||||||| ||||||
Sbjct: 1 gtttttgcttacaacgtttgactactcatcttattcaattttttttt 47
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| || ||||| |||||||||||||||||||||
Sbjct: 173 gtttttgtttacaacgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AACV01003611.1/24763-24932 39947:Oryza sativa
Japonica Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||||| |||||||||||||| ||| | |||||||| ||||||||||||| || |||
Sbjct: 18 ttgaccgctcgtcttattcaaaaaatttatgcaaatataaaaaacgaaaagttgtgctta 77
Query: 115 atatactctagggtataaagtaagtca 141
| ||||| | || |||||||||||||
Sbjct: 78 aaatactttgggtaataaagtaagtca 104
>RF01062;MIR812;FJ581045.1/130260-130099 4529:Oryza rufipogon
Length = 162
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
||||||||||||||||||||| ||| | |||||||| ||| |||||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttatgcaaatataaaaagcgaaaagttatgctta 77
Query: 115 atatact 121
| |||||
Sbjct: 78 aaatact 84
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaat 76
||||||||||||| | ||||||||||||||||||||||
Sbjct: 162 gtttttgcttgcactgtttgaccactcgtcttattcaat 124
>RF01062;MIR812;AP004632.3/148714-148539 39947:Oryza sativa Japonica
Group
Length = 176
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 40 ttttgcttgcaacgcttgaccactcgtct--tattcaattgttttttacaaatatagaaa 97
|||| ||||||||| |||||||||||||| ||||||| | |||||| |||||||| |||
Sbjct: 3 tttttcttgcaacgtttgaccactcgtcttatattcaaattttttttgcaaatataaaaa 62
Query: 98 acgaaaagtt 107
| |||||||
Sbjct: 63 ataaaaagtt 72
>RF01062;MIR812;AACV01014767.1/38057-37887 39947:Oryza sativa
Japonica Group
Length = 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||||||| || ||||||||||||||||||
Sbjct: 171 gtttttgcttgcaccgtttgaccactcgtcttatt 137
>RF01058;MIR806;AAAA02000336.1/19576-19334 39946:Oryza sativa Indica
Group
Length = 243
Score = 54.0 bits (27), Expect = 1e-06
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaattgtt 80
|||||||| |||||| | |||| |||||| | ||||||||||||||||||||| |
Sbjct: 225 aatataagggattttgacattttccttgcactgattgaccactcgtcttattcaaaaaat 166
Query: 81 ttttacaaatatagaaaacgaaaagtt 107
|| | |||||||| |||||||||||||
Sbjct: 165 ttgtgcaaatataaaaaacgaaaagtt 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 21 aatataagagattttcagtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||| |||||| | ||||||||||| | ||||||| |||||||||||||
Sbjct: 19 aatataagggattttgacattttgcttgcactgtttgaccattcgtcttattcaa 73
>RF01062;MIR812;AAAA02036734.1/2948-2780 39946:Oryza sativa Indica
Group
Length = 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| || ||||||||| |||||||||||
Sbjct: 169 gtttttgcttgcaccgtttgaccacttgtcttattcaa 132
>RF01062;MIR812;AAAA02005879.1/5825-5992 39946:Oryza sativa Indica
Group
Length = 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttat 109
|||| ||||||||| |||||||| || | |||||| |||||||| |||||||||| || |
Sbjct: 13 aacgtttgaccacttgtcttatttaaattttttttgcaaatataaaaaacgaaaatttgt 72
Query: 110 gtttaatatactctagggtataaagtaagt 139
| |||| |||| ||| |||||||||||
Sbjct: 73 gcttaaaataccgtagataataaagtaagt 102
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 46 ttgcaacgcttgaccactcgtcttattcaa 75
|||||||| ||||||||||| |||||||||
Sbjct: 160 ttgcaacgtttgaccactcgccttattcaa 131
>RF01062;MIR812;AP004810.3/106040-105868 39947:Oryza sativa Japonica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||||| | ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1 gtttttgtttgcattgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
>RF01062;MIR812;AAAA02018755.1/3057-2885 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| | |||||||||||||||||||||
Sbjct: 173 gtttttgcttgcactgtttgaccactcgtcttattcaa 136
>RF01062;MIR812;AC145325.3/42995-43168 39947:Oryza sativa Japonica
Group
Length = 174
Score = 52.0 bits (26), Expect = 4e-06
Identities = 78/94 (82%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattc-aattgttttttacaaatatagaaaacgaaaagtta 108
|||| ||||||| | ||||||||| |||| |||||| |||||||| ||||| |||||||
Sbjct: 13 aacgtttgaccatttgtcttattcaaattcttttttgcaaatataaaaaacaaaaagttg 72
Query: 109 tgtttaatatactctagggtataaagtaagtcac 142
|| |||| |||| ||| ||||||||||||||
Sbjct: 73 tggttaaagtactatagataataaagtaagtcac 106
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||||||||||||| ||||| |||||| ||||||||
Sbjct: 174 gtttttgcttgcaacgtttgactactcgttttattcaa 137
>RF01062;MIR812;AAAA02020519.1/16817-16988 39946:Oryza sativa Indica
Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| |||| ||||||| |||| |||||| ||| |||||| ||||||| |||
Sbjct: 1 gtttttgcttgtaacgtttgaccattcgtattattccatt-tttttttcaaatattaaaa 59
Query: 98 acgaaaagtt 107
|| |||||||
Sbjct: 60 acaaaaagtt 69
>RF01062;MIR812;AACV01005799.1/13497-13667 39947:Oryza sativa
Japonica Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/53 (88%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
|||||||||| |||||||||| | ||||| |||||||| |||||||||||||
Sbjct: 18 ttgaccactcatcttattcaaattttttt--caaatataaaaaacgaaaagtt 68
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| |||| |||| |||||||||||||||||||||
Sbjct: 171 gtttttacttgtaacgtttgaccactcgtcttattcaa 134
>RF01062;MIR812;AAAA02010849.1/11238-11401 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| | |||||||||||||||||||||
Sbjct: 1 gtttttgcttgcactgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02005420.1/17308-17480 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||||||| | | ||||||||||||||||||||| ||| |||||||||| |||
Sbjct: 1 gtttttgcttgtagtgtttgaccactcgtcttattcaaagaatttatacaaatataaaaa 60
Query: 98 acgaaaagtt 107
| ||||||||
Sbjct: 61 atgaaaagtt 70
>RF01062;MIR812;AP008218.1/21453608-21453436 39947:Oryza sativa
Japonica Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||| || | ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1 gtttttgcttataatgtttgaccactcgtcttattcaaaaaatttatgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
||||||||||
Sbjct: 61 acgaaaagtt 70
>RF01062;MIR812;AP004302.3/102499-102666 39947:Oryza sativa Japonica
Group
Length = 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||| ||| |||| |||||||||||||||||||||
Sbjct: 168 gtttttgtttgtaacgtttgaccactcgtcttattcaa 131
>RF01062;MIR812;AP005164.3/83305-83475 39947:Oryza sativa Japonica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
||||||| ||||| | ||||||||||||||||||||| | ||| | |||||||| |||
Sbjct: 1 gtttttgtttgcattgtttgaccactcgtcttattcaaataatttgtgcaaatataaaaa 60
Query: 98 acgaaaagtt 107
| ||||||||
Sbjct: 61 atgaaaagtt 70
>RF01062;MIR812;AACV01022757.1/36968-37137 39947:Oryza sativa
Japonica Group
Length = 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
|||||| ||||||||| ||||||||||||| |||||||
Sbjct: 170 gtttttacttgcaacgtttgaccactcgtcctattcaa 133
>RF01062;MIR812;AC134923.2/59990-60160 39947:Oryza sativa Japonica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 60 cactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgtttaatata 119
|||| ||||||||||| |||| | ||||||| ||||||||||||| ||||||| |||
Sbjct: 23 cacttgtcttattcaaaaattttgtgcaaatattaaaaacgaaaagttgtgtttaaaata 82
Query: 120 ctctagggtataaagtaagtca 141
|| ||| |||||||||||||
Sbjct: 83 ctttagataataaagtaagtca 104
>RF01062;MIR812;AP008208.1/33215908-33216080 39947:Oryza sativa
Japonica Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 50 aacgcttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagtt 107
|||| ||||||||||||||||||||| ||| | |||||||| |||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaacgaaaagtt 70
>RF01062;MIR812;AACV01020588.1/577-411 39947:Oryza sativa Japonica
Group
Length = 167
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaattgttttttacaaatatagaaa 97
|||||||||||| | ||||||||||||||||||||| | ||| | |||||||| |||
Sbjct: 1 gtttttgcttgcgctgtttgaccactcgtcttattcaaaagatttgtgcaaatataaaaa 60
Query: 98 acgaaaagttatgtttaa 115
| ||||| ||||| ||||
Sbjct: 61 atgaaaaattatgcttaa 78
>RF01062;MIR812;AP003343.3/135412-135241 39947:Oryza sativa
Japonica Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tttttgcttgcaacgcttgaccactcgtcttatt 72
||||||||||||||| ||||||| ||||||||||
Sbjct: 2 tttttgcttgcaacgtttgaccattcgtcttatt 35
>RF01062;MIR812;AP003210.3/62731-62562 39947:Oryza sativa Japonica
Group
Length = 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 gtttttgcttgcaacgcttgaccactcgtcttattcaa 75
||||||||||||| | |||||||||||||||||||||
Sbjct: 170 gtttttgcttgcactgtttgaccactcgtcttattcaa 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 55 ttgaccactcgtcttattcaattgttttttacaaatatagaaaacgaaaagttatgttta 114
|||||||||||||||||||| ||| | |||||||| |||||||||||||||| |||
Sbjct: 18 ttgaccactcgtcttattcagaaaatttatgcaaatataaaaaacgaaaagttatgctta 77
Query: 115 a 115
|
Sbjct: 78 a 78
