miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00830;mir-74;U40422.1/30902-30998 6239:Caenorhabditis elegans
          Length = 97

 Score =  192 bits (97), Expect = 6e-49
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  aaatggttcaaaaaacgttcgggcttccatctctttcccagcctacatctcaacctgggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aaatggttcaaaaaacgttcgggcttccatctctttcccagcctacatctcaacctgggc 60

                                               
Query: 61 tggcaagaaatggcagtctacacgtttttcaaccaaa 97
          |||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcaagaaatggcagtctacacgtttttcaaccaaa 97




>RF00830;mir-74;ABLE02006369.1/12112-12208 281687:Caenorhabditis
          japonica
          Length = 97

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gctggcaagaaatggcagtctac 81
          |||||||||||||||||||||||
Sbjct: 59 gctggcaagaaatggcagtctac 81




>RF00830;mir-74;CAAC02000448.1/1381014-1380917 6238:Caenorhabditis
          briggsae
          Length = 98

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 59 gctggcaagaaatggcagtcta 80
          ||||||||||||||||||||||
Sbjct: 60 gctggcaagaaatggcagtcta 81