miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00856;mir-232;Z68748.1/3269-3172 6239:Caenorhabditis elegans
Length = 98
Score = 194 bits (98), Expect = 1e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 aagttcaatttttggatccctgcagtttcgatgattttatccttaattctgaagatgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttcaatttttggatccctgcagtttcgatgattttatccttaattctgaagatgtga 60
Query: 61 taaatgcatcttaactgcggtgatctagatcatgaaca 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaatgcatcttaactgcggtgatctagatcatgaaca 98
>RF00856;mir-232;CAAC02000470.1/1099567-1099662
6238:Caenorhabditis briggsae
Length = 96
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 55 atgtgataaatgcatcttaactgcggtgatct 86
||||||||||||||||||||||||||||||||
Sbjct: 52 atgtgataaatgcatcttaactgcggtgatct 83
>RF00856;mir-232;ABLE02018558.1/14257-14154 281687:Caenorhabditis
japonica
Length = 104
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 gataaatgcatcttaactgcggtgatct 86
||||||||||||||||||||||||||||
Sbjct: 63 gataaatgcatcttaactgcggtgatct 90
>RF00856;mir-232;AAGD02002188.1/4948-5045 31234:Caenorhabditis
remanei
Length = 98
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 gataaatgcatcttaactgcggtgatct 86
||||||||||||||||||||||||||||
Sbjct: 58 gataaatgcatcttaactgcggtgatct 85
