miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00905;mir-789;Z82285.1/29139-29043 6239:Caenorhabditis elegans
Length = 97
Score = 131 bits (66), Expect = 2e-30
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 1 tgtcctgaaggcaggcaattgatgacccagacaaggactaatcaagattgtcgatctagt 60
|||||||||||| | ||||||||||| ||| || |||||||||| |||||||||| ||||
Sbjct: 1 tgtcctgaaggcggacaattgatgactcaggcagggactaatcatgattgtcgatttagt 60
Query: 61 ccctgcctgggtcaccaattgtcggcccccgcgg 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ccctgcctgggtcaccaattgtcggcccccgcgg 94
>RF00905;mir-789;ABEG01013089.1/23907-23993 135651:Caenorhabditis
brenneri
Length = 87
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 ccctgcctgggtcaccaattgtc 83
|||||||||||||||||||||||
Sbjct: 52 ccctgcctgggtcaccaattgtc 74
>RF00905;mir-789;ABLE02015100.1/4370-4465 281687:Caenorhabditis
japonica
Length = 96
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 60 tccctgcctgggtcaccaattgt 82
|||||||||||||||||||||||
Sbjct: 36 tccctgcctgggtcaccaattgt 14
