miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00955;mir-1829;Z69660.1/8998-8939 6239:Caenorhabditis elegans
Length = 60
Score = 95.6 bits (48), Expect = 6e-20
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 9 ttcaagatggttgtaaaacatcgagtactacaaccactggaatttctctatt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ttcaagatggttgtaaaacattgagtactacaaccactggaatttctctatt 60
>RF00955;mir-1829;Z78542.1/11427-11486 6239:Caenorhabditis elegans
Length = 60
Score = 87.7 bits (44), Expect = 1e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 13 agatggttgtaaaacatcgagtactacaaccactggaatttctctatt 60
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 agatggttgtaaaacatcgagtattacaaccactggaatttctctatt 60
>RF00955;mir-1829;Z79601.1/10621-10562 6239:Caenorhabditis elegans
Length = 60
Score = 60.0 bits (30), Expect = 3e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 19 ttgtaaaacatcgagtactacaaccactggaatttctctatt 60
|||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 19 ttgtaaaaaatcgagtattacaaccattggaatttctctatt 60
>RF00955;mir-1829;U97550.2/31325-31384 6239:Caenorhabditis elegans
Length = 60
Score = 42.1 bits (21), Expect = 7e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 28 atcgagtactacaaccactggaatttctctatt 60
|||||||| ||||||||| |||||||||||||
Sbjct: 28 atcgagtatgacaaccactcgaatttctctatt 60
