miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00847;mir-62;CAAC02000438.1/250486-250427 6238:Caenorhabditis
briggsae
Length = 60
Score = 103 bits (52), Expect = 3e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 11 aggtgggttagatcccatatccttccgcgtaatggaaatgatatgtaatctagcttacag 70
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1 aggtgggttagatcccatatccttccgcttgatggaaatgatatgtaatctagcttacag 60
>RF00847;mir-62;ABLE02008024.1/1957-1898 281687:Caenorhabditis
japonica
Length = 60
Score = 77.8 bits (39), Expect = 2e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 12 ggtgggttagatcccatatccttccgcgtaatggaaatgatatgtaatctagcttacag 70
|||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 ggtgagttagatctcatatccttccggaaaatggaaatgatatgtaatctagcttacag 60
>RF00847;mir-62;ABEG01018421.1/3544-3485 135651:Caenorhabditis
brenneri
Length = 60
Score = 71.9 bits (36), Expect = 1e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 11 aggtgggttagatcccatatccttccgcgtaatggaaatgatatgtaatctagcttacag 70
||||| ||||||| | ||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 1 aggtgagttagatatcgtatccttccgcttaatggtaatgatatgtaatctagcttacag 60
