miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00846;mir-64;AAGD02000398.1/371-493 31234:Caenorhabditis remanei
          Length = 123

 Score =  216 bits (109), Expect = 4e-56
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagaaggcctcgccgaatatgacactgttgcgtagcatgaccaatgagactctacaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   cagaaggcctcgccgaatatgacactgttgcgtagcatgaccaatgagactctacaaaag 68

                                                            
Query: 61  agtgaatggatctgactacgctcagtggaatacccggcgagtgccttct 109
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  agtgaatggatctgactacgctcagtggaatacccggcgagtgccttct 117




>RF00846;mir-64;AAGD02000398.1/736-840 31234:Caenorhabditis
          remanei
          Length = 105

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 5  aggcctcgccgaatatgacactg 27
          |||||||||||||||||||||||
Sbjct: 9  aggcctcgccgaatatgacactg 31