miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00830;mir-74;AAGD02008731.1/16098-16005 31234:Caenorhabditis
remanei
Length = 94
Score = 186 bits (94), Expect = 4e-47
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 17 aaaaggtcgacacgtttggacttccgtctctttcccagctgatattggatagcatgctgg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaggtcgacacgtttggacttccgtctctttcccagctgatattggatagcatgctgg 60
Query: 77 caagaaatggcagtccagatgtgtacaccttcaa 110
||||||||||||||||||||||||||||||||||
Sbjct: 61 caagaaatggcagtccagatgtgtacaccttcaa 94
>RF00830;mir-74;ABEG01000826.1/44255-44162 135651:Caenorhabditis
brenneri
Length = 94
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 70 atgctggcaagaaatggcagtccagatgtgta 101
|||||||||||||||||||||||| |||||||
Sbjct: 54 atgctggcaagaaatggcagtccacatgtgta 85
>RF00830;mir-74;CAAC02000448.1/1381014-1380917 6238:Caenorhabditis
briggsae
Length = 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 atgctggcaagaaatggcagtccagatgtg 99
|||||||||||||||||||||| |||||||
Sbjct: 58 atgctggcaagaaatggcagtctagatgtg 87
