miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 137/155 (88%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 62 gatgaatttaaat--agatatatgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || | | ||||||||||||||||||||| || ||||||||||||| ||||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||| ||||||||||| ||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| || ||| ||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| ||||||||||||| || |||||||| || ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 137/155 (88%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| ||||||||||||| ||||||||||||||| || | |||||||||| |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtag 4
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| ||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | | ||||||||||||||| |||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||||||| || ||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||||| |||||||||||||||||| |||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| |||||||||||||||||||||||||||| ||| ||| ||| ||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatat 62
Query: 61 tgatgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaa 118
| |||||| || | | |||||| | ||||||||||||| || |||||||||||||||||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaa 122
Query: 119 tgctagaatgacttatattgtgaaacgaagggagta 154
| ||||||||||||| ||||||||||| ||||||||
Sbjct: 123 tactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| |||||||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | | ||||||||||||||| |||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||||| |||| ||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| |||||||| |||||| ||||||||||||| ||| || ||| |||||||||||
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatt 100
Query: 62 gatgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| ||||||||||||| ||||||||||||||| | ||||| |||||| ||||
Sbjct: 99 aatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaat 40
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||| ||||||||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| |||||| || |||||||||||| || ||||||||| || ||||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 62 gatgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || | | |||||| | ||||||||||||| || |||||||||||| ||||
Sbjct: 64 aatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||| ||||||||||| ||| |||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| | ||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||| ||||||| ||||||||| || |||||||||| | || |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| || || ||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | ||||| | ||||||||||||| || ||||||||| | |||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || ||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 64 aatgaatcta----gatatatgtctagattcattagcatcaatatgaatgtaggaaatgc 119
Query: 122 tagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||||||||| |||||||||
Sbjct: 120 tagaatgacttatattgtgaaacggagggagtag 153
Score = 93.7 bits (47), Expect = 7e-19
Identities = 126/152 (82%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||||||| ||| | | ||| |||||||| |
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || || |||| ||||||||||||| || |||||||||||| |||||||
Sbjct: 92 atgaatcta----gacatatatctagattcattagcatcaatatgaatgtgggaaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| ||| ||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||| ||| ||| ||| ||| ||||| | ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 62 gatgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || |||||||| ||||||||||||||||| || |||||||||||| | |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||| ||||||||||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtag 159
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| |||| ||| ||| ||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | ||||||||||||| | |||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| ||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||||| | ||| ||| ||| ||| | || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
||||||||| | | |||||| |||||||||||||| || | |||||||||||||||||||
Sbjct: 65 atgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgct 124
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| ||||||||
Sbjct: 125 agaatgacttacattgtgaaacggagggagta 156
Score = 121 bits (61), Expect = 3e-27
Identities = 130/153 (84%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||||||||||||||||| ||| || ||| ||| | || ||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtt 98
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || ||| ||||||||||| ||||||||| || | |||||||||| ||||||
Sbjct: 97 aatgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgc 38
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||||||| ||| ||||
Sbjct: 37 cagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 135/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||| | || |||||||| |||||||||||||||| || ||||||||| | ||||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtag 159
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||||||| ||| | ||||| |||||||| |
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | |||||| ||||||| || |||| ||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||| |||||||||||||||||||| ||| | | ||| |||||||| ||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | | ||||||||||||||||||||| || |||||||||||| |||||||
Sbjct: 65 atgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgct 124
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| |||||| |||| ||||||||
Sbjct: 125 agaatgacttacattgtggaacggagggagta 156
Score = 129 bits (65), Expect = 1e-29
Identities = 131/153 (85%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| |||||||| |||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 98
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || | | ||||||||||| ||||||||| || ||||||||||| |||||||
Sbjct: 97 aatgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgc 38
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||||| |||| ||| ||||
Sbjct: 37 tagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 135/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||||||| ||| ||| || |||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtt 63
Query: 62 gatgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || |||||||| ||||||||||||||||| | |||||||||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||||||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||||||| ||| ||| |||||| | ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | ||||||||||||| || |||||| ||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 141 bits (71), Expect = 3e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| |
Sbjct: 159 agtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 100
Query: 61 tgatgaatttaaatagatatatgt-ctagattcattaatataaatatgaatgtgaaaaat 119
| |||||| |||| | || ||||| ||||||||||||| || |||||||||||| ||||
Sbjct: 99 taatgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaat 40
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||| ||||||||||| ||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 133/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatttaa-atagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || | | | |||||| |||||||||||| || |||||||||||| ||||||
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 141 bits (71), Expect = 3e-33
Identities = 135/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||| ||||||||||| |||||||| ||| ||| ||| |||||||||||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagttttc-ccacattcatattgatatta 63
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||| ||||||||||||||||| || |||||||||||| |||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 101 bits (51), Expect = 3e-21
Identities = 130/154 (84%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||||| |||| ||| ||| |||||||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | ||||||||||||||||| |||||||||||| |||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||| ||||| ||||| ||||| ||||||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | ||||||||||||| || |||||||||||| |||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| ||||||||||| ||||||||| || |||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||||||||||| ||| |||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||| ||| ||| ||| ||| ||||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||| |||||||||||||||| || ||||| |||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||| |||||||||||||||| ||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| |||| |||||||| ||| || |||||||||||| |
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | |||||||||||||| ||||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||| ||||||||||||||||||||| ||| |||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||| ||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 100
Query: 62 gatgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || ||| |||||| | ||||||||||||| || |||||||||||| ||||
Sbjct: 99 aatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaa 40
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
| |||||||||||||||||||||||| ||| |||||
Sbjct: 39 gttagaatgacttatattgtgaaacggaggaagtag 4
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| |||||||||||| || ||| ||| ||||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| |||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||||||||| ||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||| | | ||| ||| |||||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 62 gatgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || | | |||||| | |||||||||||||||| |||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||| ||||||| ||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgatacggagggagtag 159
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||| ||||||||||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 63 atgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| ||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
| | ||||||||| ||||||||||| ||| ||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 137 bits (69), Expect = 5e-32
Identities = 132/153 (86%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || |||| ||||||| ||||||||||| || ||||| || ||| ||||||
Sbjct: 64 aatgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgc 123
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||||||||| ||| ||||
Sbjct: 124 tagaatgacttatattgtgaaacggaggaagta 156
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||| ||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| | | | || | |||||||||||||| || |||||||||||| |||||||
Sbjct: 96 atgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| ||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||| ||||||||||||| ||| || ||| ||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 62 gatgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || |||||||| |||||||||||||||| || |||||||||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
| |||||||||||| ||||||||||| |||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagtag 159
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | ||||||||||||| ||| ||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||| |||| | ||||||||||||||||| ||||||| |||||||| |
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
||||||||| |||||||||| || ||||||||||| || ||||||||| ||| |||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||||||||| |||| |||||||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagtag 159
Score = 71.9 bits (36), Expect = 2e-12
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||| |||||| |||||||||||| ||| |||||| |||||||| |
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| |||| | |||||| | ||| |||||||| || ||||||||| || |||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||||| |||| |||| ||| |||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagtag 4
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||| ||| ||| ||| ||| ||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 63 atgaattta--aatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|| |||||| | | ||||||||||||||||||||| || |||||||||||| |||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtag 159
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | ||| ||| ||||||||||||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| ||||||||| ||||||||||| ||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||||||||||||| |||||||||| ||| ||| ||| |||| ||| |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 62 gatgaatttaa--atagatatatgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || ||| ||||| ||||||||||||||| || |||||||||||| |||||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||| ||||||||||| ||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 63 atgaatttaaa--tagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | || ||||||| |||||||||||| || ||||||||||| | ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||| || ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||||||| | || |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||| |||| ||||||||||| ||||||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 132/156 (84%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaat-gtgaaaaat 119
|||||| | | ||| |||| | |||||||||||||| || ||||| | ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtg-aaaat 40
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| |||||||||
Sbjct: 39 actagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| |||||| |||| ||||||||||||||||| || |||||||||||| |||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|| ||||||||| | ||||||||| ||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| | ||||||||| || || ||||||||||| |||||||||||||||||| ||
Sbjct: 81 atatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacat 140
Query: 137 tgtgaaacgaagggagta 154
||||||||| ||||||||
Sbjct: 141 tgtgaaacggagggagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| || |||||||||||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|| ||| || |||||||||| ||||||||||||||| || ||||||||| || |||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|| |||||||||| ||||||||||| |||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagtag 4
Score = 105 bits (53), Expect = 2e-22
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||| || ||| ||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | | |||||| ||||| || ||||| |||||| |||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| |||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagtag 157
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| || |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|| ||| || |||||||| ||||||||||||||||| || ||||||||| || |||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|| |||||||||| ||||||||||| |||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagtag 157
Score = 105 bits (53), Expect = 2e-22
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||| || ||| ||||||| |||||||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| |||| | | |||||| ||||| || ||||| |||||| |||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 127 bits (64), Expect = 5e-29
Identities = 122/143 (85%), Gaps = 10/143 (6%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || || ||||||||||||| || ||||||||||||| |||||||
Sbjct: 86 atgaatctacat----------ctagattcattaacatcaatatgaatgtgagaaatgct 37
Query: 123 agaatgacttatattgtgaaacg 145
||||||||||| |||||||||||
Sbjct: 36 agaatgacttacattgtgaaacg 14
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
||||||||||||||| ||||| ||| || ||||||||||||||||||| |||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 146 aagggagta 154
||||||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 63 atgaatttaaa--tagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||||||||||||||||| || |||||| |||||| |||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||| ||||||||| ||||||||||| |||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagtag 159
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||| ||| ||| || || |||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| |||||||||||||||||||| |||||||||| |||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 127 bits (64), Expect = 5e-29
Identities = 131/153 (85%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||| ||| ||| || ||||| |||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
||||||| ||||||||| ||||||||||||| || ||||| |||||| |||||||
Sbjct: 64 aatgaatt----tagatatatctctagattcattagcatcaatataaatgtggaaaatgc 119
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|| ||||||||||||||||||||| ||||||||
Sbjct: 120 taaaatgacttatattgtgaaacggagggagta 152
Score = 77.8 bits (39), Expect = 4e-14
Identities = 124/152 (81%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||| ||| ||| ||| |||||||||||| |
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || || |||| |||| |||||||| || ||| | ||||||| |||||||
Sbjct: 92 atgaatcta----gagatatatctaaattcattagcatcaatgtaaatgtgagaaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
| ||||||||| ||||||||||| ||| ||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 127/147 (86%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaatt 69
|||||||||||||||||||||||||| ||| || ||| |||||||| || ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 70 taaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatgctagaat 127
|| |||||||| |||||||||||||||||||| || |||||| | |||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 128 gacttatattgtgaaacgaagggagta 154
|||||| ||||||||||| ||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| | | ||| || ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | ||||||||||||| || ||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| | ||||||
Sbjct: 38 gtagaatgacttacattgtgaaacggaaggagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 127 bits (64), Expect = 5e-29
Identities = 137/160 (85%), Gaps = 6/160 (3%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatat----tga 57
||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 58 tattgatgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaa 115
| || |||||| || |||||||| ||||||||||||||||| || | ||||||||||
Sbjct: 64 tgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggg 123
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||| ||||||||||| |||||||||
Sbjct: 124 aaatgctagaatgacttacattgtgaaacggagggagtag 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 129/158 (81%), Gaps = 6/158 (3%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| ||| |||| ||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 63 atgaattt--aaatagatatatgtctagattcattaata----taaatatgaatgtgaaa 116
|||||| | | ||| |||| | |||||||||||||| | || ||||||| || |
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 117 aatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||| ||| ||| ||| ||| ||||| || ||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||||| ||||||||||||||| || |||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||| ||||||||| ||||||||||| |||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtag 4
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||| ||| ||| ||| ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | ||||||||||||| || |||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||| ||||||||||||||||||||| ||| |||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| || ||| |||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||||||||| |||||||||||||||||| |||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| |||||||||||||||||||||||||||| ||| ||| ||| ||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatat 62
Query: 61 tgatgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaa 118
| |||||| | | ||| |||| | |||||||||||||| | |||||||||||| |||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaa 122
Query: 119 tgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||| ||||||||||| ||| ||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 123 bits (62), Expect = 7e-28
Identities = 131/153 (85%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || || || |||||||||||||| || |||||||||||| |||||||
Sbjct: 65 atgaatcta----gacat---tctagattcattaacatcaatatgaatgtgggaaatgct 117
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
||||||||||| ||||||||||| |||||||||
Sbjct: 118 agaatgacttacattgtgaaacggagggagtag 150
Score = 117 bits (59), Expect = 5e-26
Identities = 129/153 (84%), Gaps = 7/153 (4%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | ||||||||||||||||| || |||||||||||| |||||||
Sbjct: 89 atgaatctaga-------atgtctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
||||||||||| ||||||||||| ||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 123 bits (62), Expect = 7e-28
Identities = 131/153 (85%), Gaps = 7/153 (4%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 63 atg-aatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
||| || ||||||||| | ||| |||||||| || |||||||||||| ||||
Sbjct: 91 atgaaacttaaataga------tgtagtttcattaacatcaatatgaatgtgggaaataa 38
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||||||||| ||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 123/153 (80%), Gaps = 5/153 (3%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| |||||||||||| |||| ||| ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
||||| || || || || || |||||||| || ||||| |||||| |||| ||
Sbjct: 65 atgaaactacatctatttaagt-----ttcattaacatcaatataaatgtgggaaatact 119
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
||||||||||| ||||||||||| ||| |||||
Sbjct: 120 agaatgacttacattgtgaaacggaggaagtag 152
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtt 63
Query: 62 gatgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || |||| |||||| ||||||||||||| || ||||| |||||| ||||
Sbjct: 64 aatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagtag 155
||| ||||||||| ||||||||||| |||||||||
Sbjct: 124 tctaaaatgacttagattgtgaaacggagggagtag 159
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||| ||| ||| ||| ||| |||||||| |
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 63 atgaattta--aatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| |||| | |||||||||||||| | |||||||||||| |||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 125/146 (85%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaa 67
||||||||||||||||||||||||||||| || || ||| ||||||| || | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 68 tttaaa--tagatatatgtctagattcattaatataaatatgaatgtgaaaaatgctaga 125
| || | || ||||||||||||||||||| | || ||||||||||||| ||||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 126 atgacttatattgtgaaacgaaggga 151
|||||||| ||||||||||| |||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/146 (83%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaa 67
||||||||||||||||||||||||||||| ||| || ||| |||||||| | |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 68 tttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatgctaga 125
| || | | |||| ||||||||||||| || | ||||||||||||| | ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 126 atgacttatattgtgaaacgaaggga 151
|||||||| ||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||| |
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || ||||||||| |||||||| |||| || |||||||||||| ||||| |
Sbjct: 65 atgaatctagatagatata-gtctagatccattggcatcaatatgaatgtgggaaatggt 123
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
|||||||||| ||| ||||||| |||||||||
Sbjct: 124 ggaatgacttacattatgaaacggagggagtag 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 121 bits (61), Expect = 3e-27
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||||| ||| ||||||||||||| || ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 63 atgaatttaaatagatata-tgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || ||| |||| | ||||||||||||| || ||||||||||||| ||||||
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||| |||||| ||| ||||
Sbjct: 37 tagaatgacttacattgcgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||| |||||||||||||||||| ||| || ||| |||||||| |
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 63 atgaatttaaataga-tatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || ||||| ||||| |||||||||||||| || ||||| ||| || |||||
Sbjct: 65 atgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatgt 124
Query: 122 tagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||||||||||| |||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagtag 158
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 119 bits (60), Expect = 1e-26
Identities = 121/143 (84%), Gaps = 10/143 (6%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || || ||||||||||||| || ||||||||||||| |||||||
Sbjct: 86 atgaatctacat----------ctagattcattaacatcaatatgaatgtgagaaatgct 37
Query: 123 agaatgacttatattgtgaaacg 145
||||||||||| |||||||||||
Sbjct: 36 agaatgacttacattgtgaaacg 14
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
||||||||||||||| ||||| ||| || ||||||||| ||||||||| |||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 146 aagggagta 154
||||||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||||||||| |||||||||| ||| ||| ||| |||||||||||| ||
Sbjct: 159 gtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtt 100
Query: 62 gatgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaat 119
|||||| || |||| |||||||||||||||||| || || ||||| |||||| ||||
Sbjct: 99 aatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaat 40
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|| | ||||||||| |||||||||| ||||||||
Sbjct: 39 gcaaaaatgacttactttgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||| |||||||||| | | ||| ||| |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||| | | ||||||||||||| || ||||| |||||| |||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| ||||||||| |||||||||| ||| ||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
||||||||||| ||||||||||||||||| |||||| ||| ||| ||| ||| |
Sbjct: 3 agtacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgt 55
Query: 61 tgatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
| |||||| || ||||||||||||||||||||||||| || ||||||||| || |||||
Sbjct: 56 taatgaatctagatagatatatgtctagattcattaacatcaatatgaatatgggaaatg 115
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| ||||||||||||||||||||| ||||||||
Sbjct: 116 ctaaaatgacttatattgtgaaacggagggagta 149
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||| ||| ||| ||||||| |||||||| ||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 63 atgaatttaaatagatatatgtctagattcattaa 97
|||||| || | | |||| | ||||||||||||||
Sbjct: 89 atgaatctagacatatatctatctagattcattaa 55
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 58 atatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacat 117
Query: 137 tgtgaaacgaagggagta 154
||||||||| ||| ||||
Sbjct: 118 tgtgaaacggaggaagta 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||| |||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 63 atgaat 68
||||||
Sbjct: 75 atgaat 70
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||||||||||||||||| ||||||||| | ||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 113 bits (57), Expect = 7e-25
Identities = 129/154 (83%), Gaps = 8/154 (5%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| || |||||||||||||||||||||||||| ||| ||| ||| |||||||| |
Sbjct: 150 agtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 91
Query: 61 tgatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
| |||||| ||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 90 taatgaat--------atatatgtctagattcattaacattaatataaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 126/152 (82%), Gaps = 8/152 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | | |||| ||||||||| || |||||||||||| |||||||
Sbjct: 65 atgaatctagacatatat--------attcattaacatcaatatgaatgtgggaaatgct 116
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| |||||||
Sbjct: 117 agaatgacttacattgtgaaacggggggagta 148
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 139 tgaaacgaagggagta 154
||||||| ||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 93 attaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggag 152
||||| || |||||||||||| |||||||||||||||||| ||||||||||| ||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 153 ta 154
||
Sbjct: 6 ta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||| ||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 82
Query: 62 gatgaat 68
||||||
Sbjct: 81 aatgaat 75
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 63 atgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| |||||||||||||||||||| || |||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
| |||||||||| ||| ||||||| | |||||||
Sbjct: 125 gtggaatgacttacattatgaaacggaaggagtag 159
Score = 87.7 bits (44), Expect = 4e-17
Identities = 122/147 (82%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 10 tccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaatt 69
||||||||| |||||||||||||| | ||| ||| ||| |||||||| | ||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 70 taaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatgctagaat 127
|| | | |||||| | ||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 128 gacttatattgtgaaacgaagggagta 154
|||||| ||||||||||| ||||||||
Sbjct: 31 gacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 111 bits (56), Expect = 3e-24
Identities = 129/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || || || |||||||||||||| | || |||||||||||| |||||||
Sbjct: 65 atgaatcta----gacatctgtctagattcattgacatcaatatgaatgtgggaaatgct 120
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
||||||||||| ||| ||||||| |||||||||
Sbjct: 121 agaatgacttacattatgaaacggagggagtag 153
Score = 93.7 bits (47), Expect = 7e-19
Identities = 126/152 (82%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| ||| ||| |||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | |||| ||||||||||||| | || |||||||||||| ||||| |
Sbjct: 92 atgaatctagacagat----gtctagattcattgacatcaatatgaatgtgggaaatgat 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| ||| ||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 111 bits (56), Expect = 3e-24
Identities = 127/152 (83%), Gaps = 14/152 (9%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
||| ||||| |||||||||||||||| ||||||||||||| |||||||
Sbjct: 82 atg----------gatat----ctagattcattaatatcaatatgaatgtgagaaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| ||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatat 62
Query: 61 tgatgaat 68
| ||||||
Sbjct: 63 taatgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||| || |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 90 aatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| ||| ||| || ||||| ||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||||| | |||||| | |||||||||||||||| || |||||||||| ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||| ||||||| ||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
|||||| ||||||||||| |||||||||||||||||
Sbjct: 3 agtactccctccgtttcataatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
|||||||||||||||||| | |||||||||||||||| |||||||||||||||||| |||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 138 gtgaaacgaaggga 151
|||||||| |||||
Sbjct: 122 gtgaaacggaggga 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggga 151
||||||||||||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 57 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||||||||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctag 105
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||| ||| ||| ||| ||| || | ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| | | | ||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 65 atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
| |||||||| ||| ||||||| ||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggagggagta 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||| |||| |||||||| ||| ||| || ||| |||| ||| ||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || | |||||||||| |||||||||| || | ||||||||| ||||||
Sbjct: 97 aatgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgc 38
Query: 122 tagaatgacttatattgtgaaacgaagggagtag 155
|| ||||||||| ||||||||||| ||| |||||
Sbjct: 37 taaaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 129/154 (83%), Gaps = 8/154 (5%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| || ||| ||| |||||||| ||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 63 atgaatttaaatagata--tatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||| |||| ||||||| ||||||||||| ||| ||||| ||||||| ||||||
Sbjct: 92 atgagtttagatagatacatatgtctagatacatcaatat------gaatgtggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| |
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 61 tgatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|| | | ||| ||| | |||| | ||||||| || |||||||||||| |||| |
Sbjct: 63 --atctag--acatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| |||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagtag 153
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 144 cgaagggagtag 155
|| |||||||||
Sbjct: 15 cggagggagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattcta 35
|||||||||||||||| |||| |||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattcta 102
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||||| |||||||||||| || |||||||||||| |||||||||||||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 139 tgaaacgaagggagta 154
||||||| ||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 93 attaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggag 152
||||| || |||||||||||| |||||||||||||||||| ||||||||||| ||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 153 ta 154
||
Sbjct: 6 ta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||| ||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtt 82
Query: 62 gatgaat 68
||||||
Sbjct: 81 aatgaat 75
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||| ||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
||||||||||| | |||||| || ||||||||||| || |||||||| | ||||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||||| ||| | ||||| |||| ||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 63 atgaatttaaat--agatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||||| || |||||||| || ||||||||||| ||||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| ||| ||| || |||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 63 atgaatttaaata--gatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
||||||||| ||| ||| | |||||||||||||||| || |||||||| || ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||| ||||||| ||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| ||||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | | | || ||| |||| ||||||||| || ||||| ||||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||| ||||||| ||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| |||||||||||||||| |||| || || |||||||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 63 atgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| ||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||| ||||||| ||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| ||| ||| |||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | |||||||||||| || |||||| ||||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||| ||||||| ||||||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 101 bits (51), Expect = 3e-21
Identities = 96/110 (87%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 25 aagtcattctagtattcaccatatttatattgatattgatgaatttaaatagatatat-- 82
|||||||||||| ||| ||| ||| |||||||| || |||||| |||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 83 gtctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
|||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 117 cggaggaagta 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctag 38
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||||| |||||||||||||
Sbjct: 129 agtacttcctccgtttcacaatataagtcattctag 94
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/153 (82%), Gaps = 10/153 (6%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || ||||||| |||||||| || |||||||||||| |||||||
Sbjct: 65 atgaatcta----------tgtctagtttcattaacatcaatatgaatgtgggaaatgct 114
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
||||||||||| |||||||||| |||||||||
Sbjct: 115 agaatgacttacattgtgaaaccgagggagtag 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || |||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 146 aagggagtag 155
||| |||||
Sbjct: 13 gaggaagtag 4
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||||| || |||||||||||| |||||||||||||||||| ||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 137 tgtgaaacgaagggagta 154
||||||||| ||| ||||
Sbjct: 22 tgtgaaacggaggtagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 4 gtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 62 gatgaat 68
||||||
Sbjct: 64 aatgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||| |||| ||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 88 aatatgtatgtacaaaatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||| ||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacat 23
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||| ||||||||||||||||| ||| |||||| |||||||| ||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtt 63
Query: 62 gatgaat 68
||||||
Sbjct: 64 aatgaat 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 104 tatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||| |||||||||||||||||| ||||| ||||| ||| ||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
|||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 138 gtgaaacgaagggagtag 155
||||||| ||| |||||
Sbjct: 123 atgaaacggaggaagtag 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 108 aatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 51 aatgtgaaaaatgctagaatgacttacattatgaaacggagggagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||| |||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 63 atgaat 68
||||||
Sbjct: 79 atgaat 74
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/151 (82%), Gaps = 11/151 (7%)
Strand = Plus / Plus
Query: 4 acttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattga 63
||||||||||||||| ||||||||||||||||| ||| || |||||||||||| || |
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 64 tgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgcta 123
| ||| || ||||||||||||||| || ||||||||| || |||||||||
Sbjct: 66 taaatcta-----------gtctagattcattaacatcaatatgaatatggaaaatgcta 114
Query: 124 gaatgacttatattgtgaaacgaagggagta 154
|||||||||| ||||||||||| ||||||||
Sbjct: 115 gaatgacttacattgtgaaacggagggagta 145
Score = 81.8 bits (41), Expect = 3e-15
Identities = 116/143 (81%), Gaps = 11/143 (7%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | ||||||| ||||| || ||||| ||||||| |||||||
Sbjct: 85 atgaatcta-----------gactagatttattaacatcaatataaatgtgagaaatgct 37
Query: 123 agaatgacttatattgtgaaacg 145
||||||||||| ||| |||||||
Sbjct: 36 agaatgacttacattatgaaacg 14
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 125/152 (82%), Gaps = 10/152 (6%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||| |||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
||| || || || |||||| |||||| || |||||||||||| ||||||||
Sbjct: 86 atgtatctatat----------ctagatacattaacatcaatatgaatgtggaaaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||| ||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 122/152 (80%), Gaps = 10/152 (6%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
||| || || ||| ||||| |||||| || |||||||||||| |||||||
Sbjct: 65 atgtatctagata----------tagatacattaacatcaatatgaatgtgggaaatgct 114
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||||||| |||||| |||| ||| ||||
Sbjct: 115 agaatgacttacattgtggaacggaggaagta 146
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
|||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 138 gtgaaacgaagggagta 154
|||||||| ||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 62 gatgaat 68
||||||
Sbjct: 64 aatgaat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagt 28
|||| |||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt- 95
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|| | | ||| ||| | |||| | ||||||| || ||||||||||| |||||||
Sbjct: 94 -atctag--acatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgc 38
Query: 122 tagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtag 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 8/154 (5%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 63 atgaatttaaatagat--atatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||| |||| |||||| |||||||||||| | || ||||||||| || ||||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| | ||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 63 atgaatttaaata--gatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| || |||| |||||||||||||| || |||||||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||| ||||||| ||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| | | || ||| |||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 63 atgaatttaaataga--tatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| | | ||| |||||||||||||| || |||||||| | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||| ||||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| |||||||||||||||||||| | |||||||| | ||||||| |||| ||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 62 gatgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaat 119
||||||||| | | ||||||||||||||||||||| || ||||||||||| |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||| | |||||||||| ||| ||| |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||| |||||| ||||||||| || |||||||| || | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 123/147 (83%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaatt 69
|||||| || |||||||||||||||| ||| ||| ||| |||| | | || ||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 70 taaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatgctagaat 127
|| ||| |||| ||||||||||||||||| | ||||||||||| |||||||||||||
Sbjct: 72 tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131
Query: 128 gacttatattgtgaaacgaagggagta 154
|||||| ||||||||||| ||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| ||| |||| | | ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | || |||||| |||||||||||||| | ||||||||||| |||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||| || |||| | |||||||
Sbjct: 38 ttagaatgacttacattatggaacggaaggagtag 4
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| | ||||| |||| ||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 63 atgaatttaaa--tagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | |||| |||| |||||||||||||| || |||||||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||| ||||||| ||| |||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagtag 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| | | || ||| |||| ||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 63 atgaatttaaatagatat--atgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| || | ||||||||||||||||| || |||||||| | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||| ||||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| |||||||||| |||||||||| ||| ||| |||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||||| ||||||||||||| || |||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|||||| | |||| ||| ||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagtag 159
Score = 61.9 bits (31), Expect = 2e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| |||||||| | |||||| ||| |||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | | | ||||||||||||||||||||| || ||||||||||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| |||||| ||| ||||||| ||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 73 atagatatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
|||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||
Sbjct: 48 atagatatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgactt 107
Query: 133 atattgtgaaacgaagggagtag 155
| ||| ||||||| ||| |||||
Sbjct: 108 acattatgaaacggaggaagtag 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 63 atgaatttaaatagatatatgtctagattcattaatataa 102
||| || || | | |||| | ||||||| |||||||||||
Sbjct: 69 atggatctagacatatatctatctagatccattaatataa 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagt 28
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||| |||||||| || ||||| ||||| ||||||||| ||||| ||| |||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 136 cggagggagta 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctag 38
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 122 cggagggagta 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 97 atataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| |||||||||||| |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 62 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| ||||||||||||||| |||||||||||||
Sbjct: 133 gtactccctccgtttcacaatataagtcattctag 99
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 97 atataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| |||||||||||| |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 75 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| ||||||||||||||| |||||||||||||
Sbjct: 4 gtactccctccgtttcacaatataagtcattctag 38
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||||||| || || |||| ||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 63 atgaatttaaatagatatat--gtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| |||||| ||||||||||||| || ||||||||||| ||||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||| ||||||| ||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| ||| ||| |||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||||| | |||||||||||| || ||||| |||||||||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||| ||||||| ||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || |||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 125 cggagggagta 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 57 aatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||| ||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgat 60
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| |||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 63 atgaat 68
||||||
Sbjct: 75 atgaat 70
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||||||| ||| ||| ||| ||| |||| |
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | ||||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 123 agaatgacttatattgtgaaacg 145
||||||||||||||| |||||||
Sbjct: 36 agaatgacttatattatgaaacg 14
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/150 (82%)
Strand = Plus / Plus
Query: 6 ttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatg 65
||||||||||||| ||| ||||||||||||| ||| ||| ||| |||| ||| || |||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 66 aatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgctaga 125
||| | | | |||| || |||||||||||| ||| ||| ||||||| ||| |||||
Sbjct: 68 aatctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 126 atgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||||| |||||||||
Sbjct: 128 atgacttatattgtgaaacggagggagtag 157
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/153 (83%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | || ||| | |||||||| || ||||||||||||| |||||||
Sbjct: 65 atgaatctatgt-gacata------gtttcattaacatcaatatgaatgtgagaaatgct 117
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
||||||||||| |||||||||| |||||||||
Sbjct: 118 agaatgacttacattgtgaaaccgagggagtag 150
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || |||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 146 aagggagtag 155
||| |||||
Sbjct: 13 gaggaagtag 4
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
||||||||||||||| ||||||||| ||| |||||||||||||||||| ||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 146 aagggagtag 155
|||||||||
Sbjct: 118 gagggagtag 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 taaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||| |||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 59 taaatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| |||||| |||||||||||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 63 atgaatttaaata 75
|||||| ||||||
Sbjct: 66 atgaatctaaata 54
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatatt 55
|||||||||||||||||||| ||||||||||||| ||| ||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/153 (83%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| | ||||| |||| || ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 63 atgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
||||| || |||| ||||||||||||||||| ||| | ||||||||||| |||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagt 153
||||||||||||| ||| ||||||| |||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatgtaagtcattctag 36
||||||||||| |||||||||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctag 125
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||||||||||||||||| || |||||||||||| |||||||||||||||||| ||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 137 tgtgaaacgaagggagta 154
||||||||| ||| ||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctag 97
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||||||||||| ||||| ||||||||||| ||| ||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||| |||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctag 38
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| || ||||||||| || |||||||||||||||||| |||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 142 aacgaagggagta 154
|||| ||||||||
Sbjct: 127 aacggagggagta 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |
Sbjct: 141 agtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 82
Query: 61 tgatgaat 68
| ||||||
Sbjct: 81 taatgaat 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatt 49
|||||||||||||||| ||||||||||||||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||| ||||||| ||| ||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttatat 107
Query: 137 t 137
|
Sbjct: 108 t 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgactta 133
|||||||| || ||||||||||||| ||||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgactta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| || ||||||||| || |||||||||||||||||| |||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 142 aacgaagggagta 154
|||| ||||||||
Sbjct: 17 aacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 62
Query: 61 tgatgaat 68
| ||||||
Sbjct: 63 taatgaat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatt 49
|||||||||||||||| ||||||||||||||||| ||| |||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatatt 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||| ||||||| ||| ||||
Sbjct: 101 aaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 91 tcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggg 150
|||||||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 151 agtag 155
|||||
Sbjct: 8 agtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 87 agattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacga 146
|||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 147 agggagtag 155
||| |||||
Sbjct: 128 aggaagtag 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||||||| ||| ||| ||| | |||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 63 atgaat 68
||||||
Sbjct: 75 atgaat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctag 38
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/152 (81%), Gaps = 10/152 (6%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | |||| |||||||| || ||||||||||| ||||||||
Sbjct: 65 atgaatctaga----------tctaaattcattagcatcaatatgaatgtagaaaatgct 114
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
||||||| ||| ||||||||||| ||||||||
Sbjct: 115 agaatgatttacattgtgaaacggagggagta 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || ||||| ||| |||||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgat 63
Query: 62 gatgaatttaaatagatatat 82
|||||| || ||||||||||
Sbjct: 64 aatgaatctagatagatatat 84
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || ||||| ||| ||| |||| |||||||||||||||||||||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
||||| ||||||||||| |||||||||||||
Sbjct: 129 gtactccctccgtttcataatgtaagtcatt 99
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| || ||||||||||||| |||| ||| ||||||||| |||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 142 aacgaagggagta 154
|||| ||||||||
Sbjct: 135 aacggagggagta 147
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtatt 40
||||| ||||||||||||||||||||||||| |||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatt 110
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 87 agattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacga 146
|||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 147 agggagta 154
||| ||||
Sbjct: 128 aggaagta 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| |||||||||||||||||| || ||||||| |||||||||
Sbjct: 57 aatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggagtag 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||| |||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctag 102
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctag 38
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| ||||||||||||||||| ||| |||||| |||| ||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 63 atgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
||||| ||| || ||||||||||||||||| ||| || | |||||||||||||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||| ||||||||| ||| |||||| |||||||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagtag 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||| ||| || |||| ||| ||| |||||||||||||||||| ||| |||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 146 aagggagta 154
||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||| ||||||||||||||||| |||||||||||| |||||||||||||||||| |||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 139 tgaaacgaagggagta 154
||||||| ||| ||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 63 atgaat 68
||||||
Sbjct: 55 atgaat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 118 atgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||| ||||||||||| |||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagtag 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaa 147
|||||||||| || ||||||||||||| |||||||||||||| ||| ||||||||||| |
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 148 gggagta 154
|||||||
Sbjct: 135 gggagta 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaa 147
|||||||||| || |||||||||||| |||||||||||||||||| ||||||||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 148 gggagta 154
|| ||||
Sbjct: 11 ggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| ||||||||||||||||||| |||||||||
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctag 108
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 125/154 (81%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||| |||||| ||||||||||||| ||| || ||||| |||||||| ||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || || ||||||||||||| || |||||||||||| |||||
Sbjct: 87 aatgaatctagat----------ctagattcattaacatcaatatgaatgtgggaaatgg 38
Query: 122 tagaatgacttatattgtgaaacgaagggagtag 155
|| ||||||||| ||| ||||||| |||||||||
Sbjct: 37 taaaatgacttacattatgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||| | ||||||||||||||||||||||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 136 cggaggaagta 146
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| ||||||||||||||||| || |||||| |||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||||| |||||| ||||||||||| || ||||||||||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| ||||||||| ||| ||||||| ||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||| ||||||||||||| ||| ||| ||| ||| |||| |||
Sbjct: 160 agtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatgg 101
Query: 61 tgatgaatttaa--atagatatatgtctagattcattaatataaatatgaatgtgaaaaa 118
| |||||| ||| ||| | ||| |||||||||||||| || ||||| || || ||
Sbjct: 100 taatgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaa 41
Query: 119 tgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||| ||| ||||||| ||| |||||
Sbjct: 40 ggctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| |||||||||||||| || |||||||||||| |||||| |||| ||||||| ||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 137 tgtgaaacgaagggagtag 155
|||||||| |||||||||
Sbjct: 113 ggtgaaacggagggagtag 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||| ||| |||||||| | |||||| ||||||||||| ||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||| |||||||||| |||| ||| ||| ||| |||||||| ||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 63 atgaat 68
||||||
Sbjct: 70 atgaat 65
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||| ||| |||||||| ||||| |||||| ||||||||||||||||||| |||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 63 atgaatttaaatagatat 80
|| |||||| ||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 96 aatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||||||||| ||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 63 atgaatt 69
|||||||
Sbjct: 65 atgaatt 71
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
||||||||| || ||||||||| || ||||||||||||||||||| ||||||||||| ||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 149 ggagtag 155
| |||||
Sbjct: 10 gaagtag 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 9 ctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||| ||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgat 74
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||| || ||||||||||||||||||| ||| ||||||| || ||||||
Sbjct: 77 aatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagtag 130
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 125/154 (81%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||| |||||| ||||||||||||| ||| || ||||| |||||||| ||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|||||| || || ||||||||||||| || |||||||||||| |||||
Sbjct: 64 aatgaatctagat----------ctagattcattaacatcaatatgaatgtgggaaatgg 113
Query: 122 tagaatgacttatattgtgaaacgaagggagtag 155
|| ||||||||| ||| ||||||| |||||||||
Sbjct: 114 taaaatgacttacattatgaaacggagggagtag 147
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||| | ||||||||||||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/110 (85%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 25 aagtcattctagtattcaccatatttatattgatattgatgaatttaaatagatat--at 82
|||||||||||| ||| || ||| |||||||| || |||||| || |||||||| ||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 83 gtctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 77.8 bits (39), Expect = 4e-14
Identities = 93/110 (84%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 25 aagtcattctagtattcaccatatttatattgatattgatgaatttaaatagatatatgt 84
|||||||||||| ||| ||| ||| |||||||| || |||||| || | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 85 --ctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||||||||| || ||||||||||||| |||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
|||| |||||||||||| || |||||||||||| | |||||||||||||||||||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 141 aaacgaagggagtag 155
||||| ||| |||||
Sbjct: 119 aaacggaggaagtag 133
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||||||| || ||| ||| |||||||| ||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 63 atgaatttaaa 73
|||||| ||||
Sbjct: 72 atgaatctaaa 62
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||| || |||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 62
Query: 61 tgatgaat 68
| ||||||
Sbjct: 63 taatgaat 70
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||| | ||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||||||||||||||||||||| ||| | ||||| |||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgt 62
Query: 61 tgatgaat 68
| ||||||
Sbjct: 63 taatgaat 70
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||||||||||||||||||| |||||||||||| ||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatt 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 93 attaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggag 152
||||| || ||||||||||| |||| |||||||||||||||||||||||| ||| ||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 153 ta 154
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 62
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || |||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 126 cggagggagta 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 63 atgaatttaaatagatat 80
|||||| || ||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 97 atataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| ||||||||| || |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 62 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 80
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 97 atataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| ||||||||| || |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 80 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctaga-atgacttatattgtgaa 142
|||||||||||||| || |||||||||||| ||||| |||| |||||| ||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 143 acgaagggagta 154
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtc 29
|||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtc 31
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 109 atgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 112 tgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 62 tgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtatt 40
|||||| ||| ||||||||||| |||||||||||||||||
Sbjct: 3 agtactcccttcgtttcacaatataagtcattctagtatt 42
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||||||| ||||||||| ||| ||||||| |||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgat 49
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 146 aagggagtag 155
|||||||||
Sbjct: 13 gagggagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 125
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctag 91
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 85 ctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaac 144
|||||||||||| || |||||||| |||||||||| |||||||||||| ||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 145 gaagggagta 154
| ||||||||
Sbjct: 122 ggagggagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggga 151
|||||||| ||| ||||| |||||||||||||||||||||||| |||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattcta 35
|||| ||||||||||||||||||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattcta 99
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatgtaagtcattcta 35
||||||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattcta 37
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 83.8 bits (42), Expect = 6e-16
Identities = 125/155 (80%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| |||||||||||||||||||| |||||||| ||| ||| ||| |||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgt 62
Query: 61 tgatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
| |||||||| ||||||||| || || || |||||||||||| |||||
Sbjct: 63 tcatgaattt------------gtctagatttatgaacatcaatatgaatgtgggaaatg 110
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| ||||||||||| ||| |||||
Sbjct: 111 ctagaatgacttacattgtgaaacggaggaagtag 145
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 89
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
|||||| || || |||||||||||| ||||||||||||| |||| ||||||||||| ||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 149 ggagta 154
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 63 atgaatttaaatagatat 80
|| |||||| ||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||| ||| |||||||| ||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 96 aatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||||||||| ||||||||||||| ||| ||| ||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||| |||||||||||||||| || ||||||||||||| |||| ||||||||||||| ||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 101 aaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||| |||||||||||||||||| ||| ||||| | |||||||||
Sbjct: 77 aaatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagtag 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||||||||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||| ||||| |||||||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctag 97
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
||||||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 146 aaggga 151
|||||
Sbjct: 13 gaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 105 atgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 88 atgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaa 67
||||||||||||||| ||||||||||||| ||| ||||| ||||||||||| |||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 68 t 68
|
Sbjct: 70 t 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
||||||||||||||||||||| |||||||||
Sbjct: 138 gtacttcctccgtttcacaatataagtcatt 108
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 87 aatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
||||||||||||||||||| || ||||| ||| ||| |||||||| ||||||||| |||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 138 gtgaaacgaagggagta 154
|||||||| ||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||| ||||||||| ||| ||| ||| ||| ||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgat 84
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||| |||||||||||||||| || ||| | ||| |||||||||||| ||||||||||||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 137 tgtgaaacg 145
|||||||||
Sbjct: 22 tgtgaaacg 14
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggg 150
|||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcatt 32
|||||| ||||||||||||| |||||||||
Sbjct: 5 tacttcttccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||| ||| |||| | |||||||||| ||||||| |||| ||| |
Sbjct: 3 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 62
Query: 61 tgatgaatttaaatagata--tatgtctagattcattaatataaatatgaatgtgaaaaa 118
| ||||| || ||| ||| |||||||||||||||||| || ||||||||||| | ||
Sbjct: 63 taatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaa 122
Query: 119 tgctagaatgacttatattgtgaaacgaagggagta 154
| ||| || | |||| ||||||||||| ||||||||
Sbjct: 123 tcctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||| | || |||||||||||| |||||||||||||||||| |||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 142 aacgaagggagta 154
|||| ||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| |||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 83 aatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtag 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||| ||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 80
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/153 (82%), Gaps = 11/153 (7%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||||||||||||| ||| ||| ||| ||| ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat--- 60
Query: 62 gatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgc 121
|| || |||||| ||| ||||||| ||||| || ||||| ||| ||| ||||||
Sbjct: 61 ---ga---tagatagatctat--ctagatttattaacatcaatataaatatgagaaatgc 112
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagta 145
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgat 90
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||||||||||||||||| || ||||||||| | ||||||||| ||||||||||||
Sbjct: 55 atatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatat 114
Query: 137 tgtgaaacg 145
|||||||||
Sbjct: 115 tgtgaaacg 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 4 acttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
||||||||||||||||||| ||||||||| ||| ||| || |||| ||||||||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgat 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||| ||| ||||||||||||||||||||||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctag 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaac 144
||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||||| |||||||||||| || |||||||||||| ||||| |||||||||||| ||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 139 tgaaacgaagggagtag 155
||||||| || ||||||
Sbjct: 20 tgaaacggagagagtag 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 117/146 (80%), Gaps = 13/146 (8%)
Strand = Plus / Plus
Query: 9 ctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaat 68
||||||||||||||||||||||||||| ||| ||| ||| |||||||| || ||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 69 ttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatg 128
||| | || |||||||||||||| || |||||| ||||||||||||||
Sbjct: 71 ctaa------acatatctagattcattaacatcaatatg-------aaaatgctagaatg 117
Query: 129 acttatattgtgaaacgaagggagta 154
||||| ||||||||||| || |||||
Sbjct: 118 acttacattgtgaaacggagagagta 143
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 146 aagggagta 154
||||||||
Sbjct: 122 gagggagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 93 attaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaac 144
||||| || |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||| |||||||||||||||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 63 atgaat 68
||||||
Sbjct: 70 atgaat 65
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||| ||| |||| | |||||||||| ||||||| |||| ||| |
Sbjct: 160 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 101
Query: 61 tgatgaatttaaatagata--tatgtctagattcattaatataaatatgaatgtgaaaaa 118
| ||||| || ||| ||| |||||||||||||||||| || ||||||||||| | ||
Sbjct: 100 taatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaa 41
Query: 119 tgctagaatgacttatattgtgaaacgaagggagta 154
| ||| || | |||| ||||||||||| ||||||||
Sbjct: 40 tcctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || |||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 146 aagggagta 154
||| ||||
Sbjct: 122 gaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||| ||||||||| ||||||| ||| ||| |||||||| ||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 63 atgaat 68
||||||
Sbjct: 70 atgaat 65
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||| | | ||||||||| ||||||||||| ||||||||
Sbjct: 57 aatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||||||||||||| | ||||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgat 60
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||| ||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgttt-cacaatgtaagtcattctagtattcaccatatttatattga 57
|||||||||||||| |||||| ||||||||||||| ||| ||| ||| |||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||||| |||||||||||||||||| ||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 144 cgaagggagtag 155
|| |||||||||
Sbjct: 113 cggagggagtag 124
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatt 49
|||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatatt 51
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 115 aaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 44 aaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||| |||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctag 90
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaa 147
||||||||| || |||||||||||| |||||||||||||||||| ||||||||||| |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 148 gggagtag 155
||||||||
Sbjct: 11 gggagtag 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaa 147
||||||||| || |||||||||||| |||||||||||||||||| ||| ||||||| |
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 148 gggagta 154
|||||||
Sbjct: 132 gggagta 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||| ||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 83
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| |||||||||||| ||||||| | |||||||| | ||||||| |||| ||| ||
Sbjct: 4 gtactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 62 gatgaatttaaatag--atatatgtctagattcattaatataaatatgaatgtgaaaaat 119
||||||||| | | ||||||||||||||||||||| || |||||||| || |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaat 123
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||| | |||||||||| ||||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 63 atgaat 68
||||||
Sbjct: 98 atgaat 93
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 91 tcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggg 150
||||||| || |||||||||||| ||||||||| ||||||||| ||||||||||| ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 151 agta 154
||||
Sbjct: 8 agta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||| ||||||||||||||||||||||||| ||| ||| ||| ||| ||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||| ||| | ||| ||||||||||| ||||||||
Sbjct: 76 aatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 76
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
|||| ||||||||| || || |||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 141 aaacgaagggagta 154
||||| ||||||||
Sbjct: 18 aaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||| || ||||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 79 aatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||||||||||||| ||||||| ||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||||||||||||| ||||||| |||| ||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 144 cgaagggagtag 155
|| ||| |||||
Sbjct: 120 cggaggaagtag 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctag 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| |||||||| ||||||| ||| || ||| |||||||| ||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 63 atgaatttaaatagatat 80
|||||| || ||||||||
Sbjct: 70 atgaatctagatagatat 53
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||||||||||||||||||| |||||||||||||||| || |||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatt 50
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 attaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggag 152
|||||||| ||||| |||||||||||| |||||||||||| ||||||||||| ||| ||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 153 ta 154
||
Sbjct: 107 ta 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattcta 35
|||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 122 tagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||| ||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
|||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 149 ggagtag 155
| |||||
Sbjct: 121 gaagtag 127
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| | | ||| |||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 63 atgaat 68
||||||
Sbjct: 66 atgaat 61
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 96 aatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||| ||||||| ||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 63 aatatatatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || |||||| | ||||||||||||| ||||||||| |||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 120 cggaggaagta 130
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcatt 32
||||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcatt 101
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatat 54
||||| ||||||||| ||||||||||||||| ||||||| ||| ||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| ||||||||||| |||||||| | |||||| ||| | ||||| |||||||| |
Sbjct: 3 agtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgt 62
Query: 61 tgatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
| |||||| || || || |||||||||||||||| || ||||||||||| | ||||
Sbjct: 63 taatgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|||||| | |||| ||| ||||||| ||| |||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagtag 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 120/152 (78%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| |||||||| | |||||| ||| ||| ||| |||| || ||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 63 atgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatgct 122
|||||| || | | |||| ||||||||||||| || ||||||||| | ||||||
Sbjct: 96 atgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgct 37
Query: 123 agaatgacttatattgtgaaacgaagggagta 154
|||| | |||| ||| ||||||| ||||||||
Sbjct: 36 agaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||||| ||| ||||||||||| |||||||||| | ||||||
Sbjct: 55 atatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataa 114
Query: 137 tgtgaaacgaagggagtag 155
| ||||||| |||||||||
Sbjct: 115 tttgaaacggagggagtag 133
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 120 cggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctag 97
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||| ||||||||||||| ||||| ||||| ||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtatt 40
||||| ||||||||| |||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatt 42
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| |||||||| | |||||| ||| ||| ||| |||| ||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 63 atgaattta--aatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| || | |||||||||||||||| || |||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| || | |||| ||| ||||||| ||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| |||||||||||||| || ||||||||||| |||||||||| | |||| ||
Sbjct: 81 atatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 140
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||| ||||
Sbjct: 141 tatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| |||||||| | |||||| ||| ||| ||| |||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaattta--aatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || |||| || | |||||||||||||||| || |||||||||||| ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| || | |||| ||| ||||||| ||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| |||||||||||||| || ||||||||||| |||||||||| | |||| ||
Sbjct: 82 atatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 23
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || ||||||||| || |||||||||||| |||||| |||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 124 cggaggaagta 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
||||||||||||||||||||||||||||| |||||| ||| ||||||| ||||| || |
Sbjct: 136 agtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgt 77
Query: 61 tgatgaat 68
| ||||||
Sbjct: 76 taatgaat 69
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||| |||||| |||||||||||| ||| ||||||| ||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattcta 35
|||| ||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattcta 37
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||| ||||||||| || ||||||||| || |||||| |||||||||||| |||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 144 cgaagggagta 154
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||| ||||||||||| ||||||||||||| ||||||| |||||| ||||||||
Sbjct: 138 agtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgat 81
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtag 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||||||||||||| ||| ||||| | ||||||||
Sbjct: 64 aatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||| ||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||| ||||| ||||| |||||||||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatt 79
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||||||||||||||| |||||||||| |||||| ||| ||| ||| |||| ||| |
Sbjct: 3 agtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
Query: 61 tgatgaatttaaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
| |||||| || | | | ||||||||||||||||||| || | |||||| | | ||||
Sbjct: 63 taatgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatg 122
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||| || | |||| ||| ||||||| ||||||||
Sbjct: 123 ctacaaagtcttacattatgaaacggagggagta 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| || ||||||||||| |||||||||| |||||| ||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 142 aacgaagggagta 154
|||| ||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 73 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgata 59
|||| ||||||||||||||||||||| ||||||| ||| ||| ||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgata 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgata 59
|||| ||||||||||||||||||||| ||||||| ||| ||| ||| |||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgata 69
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtatt 42
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
|||||||||||||||||||| | ||||| ||| || |||| |||||||||||||||||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 138 gtgaaacgaagggagtag 155
|||||||| ||| |||||
Sbjct: 123 gtgaaacggaggaagtag 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 104 tatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||| ||||| ||||||||||||| ||||||||||| ||| ||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||| |||||||||||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctag 106
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||| ||||| || ||||| | |||| ||||||||||||||||||| |||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 146 aagggagtag 155
|||||||||
Sbjct: 131 gagggagtag 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||||||||||||||||| ||| ||| | |||||||||| ||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 63 atgaatttaaatagata 79
|| ||| || |||||||
Sbjct: 79 ataaatctatatagata 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 110 tgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||| ||||||||| ||||||||| | ||||||||
Sbjct: 49 tgtgaaaaatgctaaaatgacttacattgtgaaatggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
||||| ||||| |||||||||||||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
||||||||| | ||||||||||||| |||||||||||||||||| ||||||||||| ||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 149 ggagta 154
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 97 atataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| |||||||| || ||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 73 atatatatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctag 38
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatat 54
|||| ||||||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 57 aatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 atgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||| ||||||| ||||||||||| |||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagtag 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||||||||||||||| |||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctag 78
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
||||||||| || ||||| || ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 149 ggagta 154
| ||||
Sbjct: 126 gaagta 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 63 atgaatt 69
|||||||
Sbjct: 71 atgaatt 65
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 115 aaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
||||| |||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| |||||||||||||||||||||||||||||| ||| |||||
Sbjct: 62 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtag 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 56 aatatgaatgtggaaa-tgctagaatgacttatattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattga 57
|||||||||||||||||||| ||||||||||||| ||| ||| ||| |||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctag 38
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || | |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 144 c 144
|
Sbjct: 15 c 15
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| |||||||| ||||||||| ||| ||||||| |||||||||
Sbjct: 86 aatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||| ||||||||||||| ||| ||| ||| ||| ||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgat 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||| |||||| ||| |||||||||||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctag 38
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtat 39
|||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtat 41
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||| ||||||||||||||||||||||||||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctag 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 116 aaatgctagaatgacttatattgtgaaacg 145
|||||||||||||||||| |||||||||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacg 80
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
||||| |||||||||| |||| | |||| ||||||| ||||| ||||||||||||||||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatatt 22
Query: 138 gtgaaacgaagggagta 154
||||||||||| ||||
Sbjct: 21 atgaaacgaaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacggagggagtag 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||| |||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctag 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattcta 35
||||||||| ||||||| ||| ||||||||||||
Sbjct: 4 gtacttccttcgtttcataatataagtcattcta 37
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||| | |||| ||||||||||||| ||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 146 aagggagta 154
||||||||
Sbjct: 13 gagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||||||||||||||||||| ||||||| ||| ||| | |||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 62 gatgaatttaaatagatata 81
|||||| || |||||||||
Sbjct: 64 aatgaatctatatagatata 83
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcat 31
|||| ||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 126 atgacttatattgtgaaacgaagggagtag 155
|||||||| ||||||||||| |||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtag 127
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| |||||||||||||||||||| | |||||| ||| |||||| |||| ||| |
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgt 101
Query: 61 tgatgaatttaaatagat--atatgtctagattcattaatataaatatgaatgtgaaaaa 118
| |||||| |||||| || | ||||||||||||||||| | | ||||||||| ||
Sbjct: 100 taatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaa 41
Query: 119 tgctagaatgacttatattgtgaaacgaagggagta 154
|||||||| | |||| ||||||||||| ||| ||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctag 38
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||| || || | |||||||||| | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 146 aagggagta 154
||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatatgggaaatgctagaatgacttatattgtgaaacg 14
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||| |||||||||||||
Sbjct: 120 gtacttcctccgtttcacaatataagtcattctag 86
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
||||||||||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| |||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 73 aatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 60.0 bits (30), Expect = 9e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgata 59
|||| ||||||||||||||||||||| ||||||| ||| ||| ||| |||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgata 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgata 59
|||| ||||||||||||||||||||| ||||||| ||| ||| ||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgata 61
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||
Sbjct: 57 aatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatt 42
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| ||||||||||||| || ||||||||| ||| |||||| ||||||||
Sbjct: 91 aatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 63 atgaattta 71
|| ||||||
Sbjct: 65 ataaattta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 80 tatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgt 139
||||| || ||| ||||| || |||||||||||| ||||| ||| ||||||||| |||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 140 gaaacgaagggagta 154
|||||| ||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcatt 32
|||| |||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 87 agattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacga 146
|||||||||| || |||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 147 agggagta 154
||| ||||
Sbjct: 12 aggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 attaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggag 152
||||| || |||||||||||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 153 ta 154
||
Sbjct: 136 ta 137
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
||||| |||||||||||||| |||||||||||||| ||| ||| ||| ||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgat 82
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa
Japonica Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgat 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 83 gtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaa 142
|||||||||||||| || ||||||||| || |||| ||||||||||||| ||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 143 acgaagggagtag 155
||| |||||||||
Sbjct: 125 acggagggagtag 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||| ||| |||| ||||||| ||||| ||||||||||| ||| |||||
Sbjct: 57 aatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaa 147
|||||||||| || |||||||||||| |||||||| ||||||||| ||||||||||| |
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 148 gggagtag 155
|| |||||
Sbjct: 128 ggaagtag 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||||||||||||||||| ||| ||| ||| ||| |||||||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 63 atgaat 68
||||||
Sbjct: 74 atgaat 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||||| | ||||||||| ||||||||||| | ||||||
Sbjct: 57 aatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcatt 32
|||||| | |||||||||||||||||||||||
Sbjct: 3 agtactccatccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 92 cattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggga 151
|||||| || ||||| ||||||| |||||||||||||||||| ||||||||||| ||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 152 gtag 155
||||
Sbjct: 7 gtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 117 aatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||||||| |||||| |||| | |||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagtag 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tccgtttcacaatgtaagtcattctag 36
|||||| ||||||||||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctag 68
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctag 97
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||| |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| ||| ||||| ||| |||||||||||| ||||| ||| |||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 144 cgaagggagta 154
| ||||||||
Sbjct: 96 tggagggagta 106
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcatt 32
||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
||||| ||||| ||||||||||||| ||||| ||| ||| |||||||||||||||| |
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatact 48
Query: 62 gatgaat 68
||||||
Sbjct: 47 aatgaat 41
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 80 tatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgt 139
|||||||||||| ||||| || ||||||||||| | ||||||||||| ||||| ||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 140 gaaacgaagggagta 154
|||||| ||||||||
Sbjct: 123 gaaacggagggagta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||| ||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||| ||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctag 104
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacat 114
Query: 137 tgtgaaa 143
| |||||
Sbjct: 115 tatgaaa 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 117 aatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctag 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||| ||||| |||||||||||||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctag 99
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 108 aatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||||||||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctag 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 115 aaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||| ||||||||||| |||||||||
Sbjct: 44 aaaatgctagaatgacttgcattgtgaaacggagggagtag 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatt 49
|||| |||||||||||||||| |||||||||||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatatt 51
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctag 38
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
||||||||| || |||||| ||||||||| ||||||||||||||| ||||||||||| ||
Sbjct: 69 attcattaacatcaatatggatgtgaaaa-tgctagaatgacttacattgtgaaacggag 11
Query: 149 ggagta 154
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 105 atgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggg 150
||||||||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 64 atgaatgtgaaaa-tgctagaatgacttacattgtgaaacggaggg 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctag 79
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaag 148
||||||||| || ||||||||||| |||||||||||||||||| ||||||||||| ||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 149 ggagtag 155
| |||||
Sbjct: 109 gaagtag 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 105 atgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctag 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctag 38
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 108 aatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||| |||||||| ||||||||||||| ||||||| | |||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacggatggagtag 92
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 104 tatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||||||||||||||| ||| ||||||| ||| ||||
Sbjct: 55 tatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag 38
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| |||||||| ||||| || | |||||||||| |||| ||||||||||||| ||
Sbjct: 67 atatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacat 126
Query: 137 tgtgaaacgaagggagta 154
| |||||| ||||||||
Sbjct: 127 tatgaaacagagggagta 144
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||| | |||||||||| ||| | |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 63 atgaatttaaatagat--atatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| |||||| || ||||||||||||||||||| || | |||||| || ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatt 49
||||||||||||||||||||||||| | |||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatatt 51
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa
Indica Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtatt 40
||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatt 42
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgat 81
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
||||||||||| ||||| || ||||||||| || |||||||| |||||||| ||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtg 122
Query: 141 aaacgaagggagta 154
||||| ||| ||||
Sbjct: 123 aaacggaggaagta 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 98 tataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||| |||||||| |||| ||||||| ||||| ||||||||||| ||| ||||
Sbjct: 61 tataaatgtgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 85 ctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaac 144
|||||||||||| || |||||||||||| |||||||| ||||||||| ||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 145 gaagggagta 154
| ||| ||||
Sbjct: 14 ggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||| ||| ||| ||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctaga-atgacttatattgtgaaacgaagggagtag 155
|||||||||||| |||||||| | |||||||| ||||||||||| |||||||||
Sbjct: 90 aatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagtag 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcat 31
|||| ||||||||||||||||||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcat 115
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||||| || | ||||||||| | |||||||||| | |||| ||
Sbjct: 82 atatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacat 23
Query: 137 tgtgaaacgaagggagta 154
||||||||| ||| ||||
Sbjct: 22 tgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctag 38
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||| ||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 57 aatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||| ||| ||||| ||||| ||||||||
Sbjct: 69 aaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctag 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 110 tgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| ||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
||||| |||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||||||||||||||||||||||||||||| |||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatt 72
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
||||| |||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| |||| ||| ||||||||| ||||||||||| ||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 125 aatgacttatattgtgaaacgaagggagta 154
||||||||| ||||||||||| ||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 107 gaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||| ||| ||||||||||||||| ||||||||||| ||| |||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||| ||||| || ||||||||||| | |||||||||| | |||| |||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 142 aacgaagggagtag 155
|||| |||||||||
Sbjct: 128 aacggagggagtag 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||| | ||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctag 107
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 85 ctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaac 144
|||||||||||| || |||||||||||| |||||||| ||||||||| ||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 145 gaagggagta 154
| ||| ||||
Sbjct: 134 ggaggaagta 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||||||||||||| ||| ||| ||| ||| ||||||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat 88
Score = 54.0 bits (27), Expect = 6e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctaga-atgacttatattgtgaaacgaagggagtag 155
|||||||||||| |||||||| | |||||||| ||||||||||| |||||||||
Sbjct: 58 aatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcat 31
|||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcat 33
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 51 atattgatattgatgaatttaaatagatatatgtctagattcattaatataaatatgaat 110
||||||||||| |||||| || ||||||||| ||||||||||||||||| ||||||||
Sbjct: 19 atattgatattaatgaatctagatagatataa-tctagattcattaatatcaatatgaac 77
Query: 111 gtgaaaaatgctag 124
||| |||||||||
Sbjct: 78 gtgggaaatgctag 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 51 atattgatattgatgaatttaaatagatatatgtctagattcattaatataaatatgaat 110
||||||||||| |||||| || || |||| | ||||||||||||||||| ||||||||
Sbjct: 73 atattgatattaatgaatctagatt-atatctatctagattcattaatatcaatatgaac 15
Query: 111 gtgaaaaatgctag 124
||| |||||||||
Sbjct: 14 gtgggaaatgctag 1
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctag 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 106 tgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct: 53 tgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 111 gtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| |||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctag 38
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| || |||||||||||| |||||||| | | |||| |||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtga 18
Query: 142 aacgaagggagtag 155
|||| |||||||||
Sbjct: 17 aacggagggagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| |||||||||||||| || || |||||||| |||| || || | |||| ||
Sbjct: 81 atatatatctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacat 140
Query: 137 tgtgaaacgaagggagtag 155
||||||||| |||||||||
Sbjct: 141 tgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctag 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 104 tatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||| |||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctag 38
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 105 atgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
|||||| ||||||||||||||||||| |||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaactcattctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 89 attcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacga 146
|||||||| || |||||||||||| |||||||| |||||||| |||||| |||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacga 106
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 90 ttcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagg 149
|||||||| || |||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 150 gagtag 155
|||||
Sbjct: 9 aagtag 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||| |||||||||||| ||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaa 67
|||||
Sbjct: 65 atgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 agaatgacttatattgtgaaacgaagggagtag 155
|||||||||| |||||||||||||||||||||
Sbjct: 69 agaatgacttgcattgtgaaacgaagggagtag 101
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgat 67
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| ||| ||| |||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 57 aatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| ||| ||| |||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 70 aatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
|||||||||||||||||||| || ||||||||||| |||||||||| |||||| |||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 138 gtgaaacgaagggagta 154
||||||| ||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||| |||||||||| ||||||
Sbjct: 3 agtacttcctccgtttcataatgtaagtctttctag 38
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattga 57
|||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||||||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 117 aatgctagaatgacttatattgtgaaacg 145
|||||||||||||||||||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacg 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||| ||||||||||||| |||||||||||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctag 71
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||||| |||||||||||| || ||||| ||||| |||||||||| | |||||||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 139 tgaaacgaagggagtag 155
||||||| |||||||||
Sbjct: 121 tgaaacggagggagtag 137
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||||| |||||||||||| || ||||| ||||| |||||||||| | |||||||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 139 tgaaacgaagggagtag 155
||||||| |||||||||
Sbjct: 20 tgaaacggagggagtag 4
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| ||||||| |||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 41 aatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||||||||||||| ||||| ||||||||||||| ||| || ||||||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgat 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 125 aatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||||| || |||||
Sbjct: 34 aatgacttatattgtgaaacggagagagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 90 ttcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagg 149
|||||||| || | ||| |||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 150 gagta 154
|||||
Sbjct: 117 gagta 121
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcatt 32
|||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatt 34
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 101 aaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| |||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 58 aaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||||||| ||||||||||||| ||| ||| ||||||| |||| ||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 63 atgaa 67
|||||
Sbjct: 61 atgaa 57
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 78 tatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatatt 137
|||||||||||||||| ||| || ||| ||||||| |||||| |||||||||||| |||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 138 gtgaaacgaagggagta 154
| ||||| ||||||||
Sbjct: 122 ataaaacggagggagta 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||| ||||| |||||||||||| ||| ||||||| ||||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattcta 35
|||| ||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattcta 37
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 115 aaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 44 aaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||||||||| ||| |||||||||||||||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagtag 147
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||||||||||| ||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| ||| ||||||| |||||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctag 113
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 63.9 bits (32), Expect = 6e-10
Identities = 125/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||| | || ||| ||| ||| |||||| | ||||||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 63 atgaatttaaatagatatatg--tctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| || |||| |||||||||||||| || |||| ||||| | ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
||||| | |||| ||| ||||||| ||||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||| ||||||||||||||||| | || |||||| | ||||||| || | |||| ||||
Sbjct: 81 atatatctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattg 140
Query: 139 tgaaacgaagggagtag 155
||||||| ||| |||||
Sbjct: 141 tgaaacggaggaagtag 157
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| |||||||| |||||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
||||||||||||||||||||||||| |||||||| ||| ||| ||| ||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgat 77
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
|||||||||||||||| || ||||| ||| || |||||||| ||||||||| ||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 141 aaacgaagggagta 154
|||| ||||||||
Sbjct: 18 gaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| ||||||||||||| |||| ||||||||||| ||| |||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||| |||||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatat 54
|||| ||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttata 53
|||| ||||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||||||||||| ||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 11 ccgtttcacaatgtaagtcattctagtattcaccatatttatat 54
|||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||| |||||| |||||||||||||||||| |||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacg 97
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctag 38
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| ||||||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattc 41
|||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcattc 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 117 aatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||| | |||||| ||| ||| || |||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 63 atgaatttaaatagat--atatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| |||| | || |||||||||||||||||| || | |||||| || ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||| ||||| |||||||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 146 aagggagtag 155
||| |||||
Sbjct: 13 gaggaagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctag 125
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||| |||||| |||||||| | |||||| || ||| |||||||| |||| |
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 63 atgaatttaaatagatatatgt--ctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || | | |||| ||| |||||||||||| ||| ||||||||||| ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||| ||||||| ||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
||||||||||||||||| || ||||||||||| |||||||||| | |||||| | ||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 19
Query: 141 aaacgaagggagtag 155
||||| |||||||||
Sbjct: 18 aaacggagggagtag 4
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
||||||||||||||||| || ||||||||||| |||||||||| | |||||| | ||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 114
Query: 141 aaacgaagggagtag 155
||||| |||||||||
Sbjct: 115 aaacggagggagtag 129
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctag 61
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctag 38
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 120 gctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||| ||||||||||| ||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 aaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||||||||||| |||||| |||| ||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| |||||||| | |||||| || ||| ||| |||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 63 atgaatttaaataga--tatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| |||| | | |||||||||||||||||||| || |||||||||| | ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||| ||||||| ||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||||||||||||| |||||||| | |||||| ||| | | ||| |||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| || | ||| |||||||||||| || ||||||||||| | ||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||| ||||||| ||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 73 atagatatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||||| |||||||||||||||||| ||||| || || ||| |||||||||||
Sbjct: 86 atagatataagtctagattcattaatatctatatgcatatgggcaatattagaatgactt 27
Query: 133 atattgtgaaacgaagggagtag 155
| ||| ||||||| |||||||||
Sbjct: 26 acattatgaaacggagggagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||| |||||||||||||||||
Sbjct: 137 gtacttcctccgtttcataatgtaagtcattctag 103
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| ||||||||||| |||||||||||||||| |||| |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||| | ||||||||||||||||| ||| ||||||| ||| ||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| ||| ||||||||||| | |||||||||| | |||||| | |||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 142 aac 144
|||
Sbjct: 123 aac 125
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 115 aaaatgctagaatgacttatattgtgaaacg 145
|||||||||||||||||||||||||||||||
Sbjct: 50 aaaatgctagaatgacttatattgtgaaacg 80
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctag 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||| |||||||||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctag 56
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagtag 155
|||||||||||| || ||||||||||||||| |||||||||| |||||||||
Sbjct: 71 aatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 91 tcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaaggg 150
||||||| || |||||||||||| ||| ||||| ||||||||| ||| ||||||| |||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 151 agta 154
||||
Sbjct: 8 agta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcatt 32
|||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcatt 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||| |||| ||||||||||||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctag 90
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag 38
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 83 gtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaa 142
||||||||||||||| || ||||| ||||| ||||||||||||| ||| ||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 143 acgaagggagta 154
|| ||||||||
Sbjct: 121 acagagggagta 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 117 aatgctagaatgacttatattgtgaaacgaagggagtag 155
||||||||||||||||| ||| ||||||| ||| |||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
||||||||||||||||| || ||||||||||| | |||||||||| | |||| ||| ||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 118
Query: 141 aaacgaagggagta 154
|||| ||||||||
Sbjct: 119 aaacagagggagta 132
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaa 126
||||||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaa 9
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtatt 40
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtatt 42
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| ||| || ||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 87 aatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgat 58
|||| ||||| ||||| ||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgat 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 109 atgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||| ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
|||||||||||||| || |||||||| ||| |||||||||| |||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 144 c 144
|
Sbjct: 15 c 15
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaa 143
||||||||||||| || |||||||| || |||||||||| | |||||||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 144 cgaagggagta 154
|| ||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||| |||||| || |||||||||||| |||||||||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 84 tctagattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||| |||||| || |||||||||||| |||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtg 113
||||||||||||||||||||| ||| |||||||||||
Sbjct: 48 atatatgtctagattcattaacatatatatgaatgtg 12
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtg 113
|||||| |||||||||||||| ||| |||||||||||
Sbjct: 43 atatatatctagattcattaacatatatatgaatgtg 79
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
||||||||||||| ||||| || ||||||||||| |||||||||| | |||| ||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 139 tgaaacgaagggagtag 155
||||||| ||| |||||
Sbjct: 119 tgaaacggaggaagtag 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||| | ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctag 101
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 103 atatgaatgtgaaaaatgctagaatgacttatattgtgaaacgaagggagta 154
||||||||||||| |||||||||| | |||| | | ||||||| ||||||||
Sbjct: 56 atatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||| ||
Sbjct: 138 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 79
Query: 62 gatgaatttaaa 73
|||||||||||
Sbjct: 78 aatgaatttaaa 67
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatatt 61
|||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 63
Query: 62 gatgaatttaaa 73
|||||||||||
Sbjct: 64 aatgaatttaaa 75
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatg 128
||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct: 48 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||| |||||||||||||| || ||||||||||| |||||||||| | |||||| |
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatc 143
Query: 139 tgaaacgaagggagta 154
||||||| ||||||||
Sbjct: 144 tgaaacggagggagta 159
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||||||||||||||||| || ||||||||||| |||||||||| | ||||||
Sbjct: 81 atatatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataa 140
Query: 137 tgtgaaacgaagggagtag 155
| ||||||| ||| |||||
Sbjct: 141 tatgaaacggaggaagtag 159
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||| | || ||| ||| ||||||| || | ||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 63 atgaattt--aaatagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| | | ||| ||| ||| |||||||||||| | ||||| || ||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatat 60
|||||| |||||||||||||||||||| | |||||| ||| ||||| |||| || |
Sbjct: 3 agtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgt 62
Query: 61 tgatgaatttaaatagat--atatgtctagattcattaatataaatatgaatgtgaaaaa 118
| |||||| |||| | || ||||||||||||||||||| || | |||||| || ||
Sbjct: 63 taatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaa 122
Query: 119 tgctagaatgacttatattgtgaaacgaagggagtag 155
||||| || | |||| ||||||||||| ||| |||||
Sbjct: 123 tgctaaaaagtcttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||||||||| | ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagactttctag 38
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
||||||||||||||||||||||||| | || ||||||| | ||| || | ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 63 atgaatttaa--atagatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| ||| ||| |||||||||||||| ||||| || | ||| ||||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 121 ctagaatgacttatattgtgaaacgaagggagta 154
|||||| | |||| ||||||||||| ||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 agtacttcctccgtttcacaatgtaagtcattctag 36
|||||| |||||||||||||||||||| | ||||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctag 125
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||| | ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctag 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||| |||||| |||||||||| | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 146 aagggagta 154
||| ||||
Sbjct: 150 gaggaagta 158
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||||||||||||||||| || ||||||||||| |||| ||||| | ||||||
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||||||||
Sbjct: 121 tatgaaacggagggagta 138
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagt 28
||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagt 30
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagt 28
||||||||||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagt 115
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 80 tatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgt 139
|||||||| |||||||| ||| ||||||||||| |||||||||| | |||| |||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 140 gaaacg 145
||||||
Sbjct: 112 gaaacg 117
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||||| |||||||||||||||||| | |||||| ||| ||| ||| |||| |||| |
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatacta 67
Query: 63 atgaattta 71
|||||||||
Sbjct: 66 atgaattta 58
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||| | ||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctag 106
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||||||| |||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctag 38
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
||||||||||||||||||| | ||| ||||||||||| |||| ||||| | ||||||
Sbjct: 82 atatatgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtcttataa 23
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 125/156 (80%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||| ||||||||||||||| | |||||| ||| ||| ||| || | ||| ||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 63 atgaatttaa--atagatatatgtctagattcatta--atataaatatgaatgtgaaaaa 118
|||||| ||| ||| ||| ||| ||||||||||| ||||| ||||| |||||| ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 119 tgctagaatgacttatattgtgaaacgaagggagta 154
||||| || | |||| ||||||||||| ||||||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 79 atatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattg 138
|||||| |||||||||||| || | ||||||||| |||||||||| | |||| ||||
Sbjct: 80 atatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattg 21
Query: 139 tgaaacgaagggagta 154
|||||| ||||||||
Sbjct: 20 tgaaacagagggagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
||||||||||| |||| || ||||||||||| | |||||||||| | |||| ||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 142 aacgaaggga 151
|||| |||||
Sbjct: 96 aacggaggga 105
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
|||||||||||||||| || ||||||||||| |||| ||||| | |||| ||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 141 aaacgaagggagta 154
||||| ||||||||
Sbjct: 145 aaacggagggagta 158
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||||||||||||| || | ||||||||| |||||||||| | |||| |||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 142 aacgaagggagtag 155
|||| ||| |||||
Sbjct: 17 aacggaggaagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
||||||||||||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 85 ctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaac 144
||||||||||||| || ||||| ||||| |||||||||| | |||| ||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 145 gaagggagta 154
| ||||||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaagtcattctag 36
|||||||||||||||| |||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctag 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| ||||||||||| |||||||||| ||||||
Sbjct: 84 gtactccctccgtttcataatgtaagtctttctag 50
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaa 126
|||||| |||||||||||||| ||| ||||||||||| ||||||||||
Sbjct: 58 atatatatctagattcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 81 atgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtg 140
||||||||||||||||| || ||||||||||| |||||||||| | |||||| | ||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 141 aaacgaagggagta 154
||||| ||| ||||
Sbjct: 113 aaacggaggaagta 126
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtga 141
|||||| ||||||||| || ||||||||||| |||||||||| | |||| ||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 142 aacgaagggagta 154
|||| ||||||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatgtaagtcattctagtatt 40
|||||||||||||||||||| | ||||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtatt 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 2 gtacttcctccgtttcacaatgtaagtcattctag 36
||||| |||||||||||||||||||| | ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaaggctttctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 117 aatgctagaatgacttatattgtgaaacgaagggagta 154
|||||||||| | |||| ||||||||||| ||||||||
Sbjct: 42 aatgctagaaagccttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatgactt 132
||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 88 gattcattaatataaatatgaatgtgaaaaatgctagaatga 129
||||||||| || |||||||||||| ||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||||||| | |||||||||| | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 146 aagggagta 154
||||||||
Sbjct: 150 gagggagta 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 123/155 (79%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 3 tacttcctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattg 62
|||| |||||||||||||||||||| | |||||| ||| || ||| |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 63 atgaatttaaata--gatatatgtctagattcattaatataaatatgaatgtgaaaaatg 120
|||||| || ||| |||| ||||||||||||||| || || |||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 121 ctagaatgacttatattgtgaaacgaagggagtag 155
|||||| | |||| ||| ||||||| ||| |||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||||||||| |||||||||| | |||||| | |||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 146 aagggagta 154
||||||||
Sbjct: 152 gagggagta 160
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||| | |||||||||||| || ||||||||||| |||||||||| | ||||||
Sbjct: 82 atatatatatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 23
Query: 137 tgtgaaacgaagggagta 154
| ||||||| ||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 77 atatatgtctagattcattaatataaatatgaatgtg 113
||||||||||||||| ||||| ||| |||||||||||
Sbjct: 82 atatatgtctagatttattaacatatatatgaatgtg 46
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 tacttcctccgtttcacaatgtaag 27
|||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 130 cttatattgtgaaacgaagggagtag 155
|||||||||||||||| |||||||||
Sbjct: 130 cttatattgtgaaacggagggagtag 155
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 86 tagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgtgaaacg 145
|||||||||||| || ||||||||||| |||||||||| | |||| ||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 146 aagggagta 154
||||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 9 ctccgtttcacaatgtaagtcattctagtattcaccatatttatattgatattgatgaat 68
|||||||||| |||||||| | |||||| ||| |||||||||||| ||| || ||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 80 tatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatattgt 139
|||||||||||||||||| || |||| ||| || | |||||||||| | |||| ||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 140 gaaacgaagggagta 154
|||||| || |||||
Sbjct: 123 gaaacggagagagta 137
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 82 tgtctagattcattaatataaatatgaatgtg 113
|||||||||||||||| ||| |||||||||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtg 46
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 77 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaatgacttatat 136
|||||||| |||||||||| |||| ||||||||||| ||||||| || | |||| ||
Sbjct: 81 atatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacat 140
Query: 137 tgtgaaacgaagggagta 154
| |||||| ||||||||
Sbjct: 141 tatgaaaccgagggagta 158
