miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||||||||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||||||||||| ||||||||||||||||| ||| |||||| || || ||||||
Sbjct: 67 gaatctagatagatat--atatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| |||||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/152 (84%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | |||||||| |||||| |||||| ||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||||| ||| ||||||||||| |||||||||| ||| || |||| ||
Sbjct: 93 tctagacatatatatctat--ctagattcattaacatcaatatggatgtggaaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 138/159 (86%), Gaps = 4/159 (2%)
Strand = Plus / Minus
Query: 10 atgtccttcctccgtttcagaa--taagtcagtttagtattttccacatatatattgatg 67
|||| |||||||||||||| || ||||||| ||||| |||| |||||| ||||||||||
Sbjct: 161 atgtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatg 102
Query: 68 ttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatatgag 127
||||||||||||||||| | |||||||||||||||||| ||||||||||| || || |
Sbjct: 101 ttaatgaatctagatag--aaatatatgtctagattcataaacatcaatataaatgtggg 44
Query: 128 aaatattaaaatgacttacattgtgaaacagagggagta 166
|||| |||||||||||| ||||||||| |||||||||
Sbjct: 43 aaatgcaaaaatgacttactttgtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/152 (84%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaa--taagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| || ||||||| ||| | |||| |||||| |||||||||||| |||||
Sbjct: 10 cctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||| | ||| ||||||||||| ||||||||||| || || ||||| ||
Sbjct: 70 tctagacatatatttctat--ctagattcattaacatcaatataaatgtgggaaatgcta 127
Query: 136 aaatgacttacattgtgaaacagagggagtac 167
||||||||||| ||||||||| |||| |||||
Sbjct: 128 aaatgacttactttgtgaaacggaggaagtac 159
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 132/152 (86%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||||||||| ||||| |||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||||||||||||||| ||||||||||||| | |||||||| || || ||||| |||
Sbjct: 93 tctagatagatatatat--gtctagattcattaatatcaatatgaatgtgggaaatgtta 36
Query: 136 aaatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagtac 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 103/121 (85%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| |||||||| |||||||||||||| | |||||| ||| |||||||||
Sbjct: 40 atttcccacattcatattgatattaatgaatctagacatatatatctat--ctagattca 97
Query: 106 ttgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagt 165
|| | |||||||| || ||| ||||| || |||||||||||||||||||| ||||||||
Sbjct: 98 ttaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacggagggagt 157
Query: 166 a 166
|
Sbjct: 158 a 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 131/151 (86%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||||||||||| ||||||||| ||||||| |||||||||| || || |||||||||
Sbjct: 70 tctagatagatat--atatgtctacattcattaacatcaatatgaatgtgggaaatatta 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 128 gaatgacttacattgtgaaacggaggaagta 158
Score = 103 bits (52), Expect = 8e-22
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | || ||||| |||||| ||||||||||||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaat 97
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||| |||| | |||||| ||| ||||||||||| |||||||||| || || |||||
Sbjct: 96 gaatgtagacatatatatctat--ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| |||||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| ||||| |||| |||||| ||||| ||||||||
Sbjct: 156 cttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaat 97
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||||||||||| ||||||||||||||||| |||||||||| || || | |||
Sbjct: 96 gaatctagatagatat--atatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| |||||||||||||||||||| |||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/108 (85%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||||||||||||||| | |||||| ||| ||||||||||| |||| |||||
Sbjct: 53 atattgatgttaatgaatctagacatatatatctat--ctagattcattaacattaatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || ||||| |||||||||||| |||||||||| |||| ||||
Sbjct: 111 gaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 118/136 (86%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 32 taagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatata 91
||||||| | ||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 137 taagtcattctagcatttcccacattcatattgatattaatgaatctagatagatatata 78
Query: 92 tatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgt 151
| ||||||||||||| ||||||||||| || || ||||| |||||||||||||||||
Sbjct: 77 t--gtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgt 20
Query: 152 gaaacagagggagtac 167
||||| |||| |||||
Sbjct: 19 gaaacggaggaagtac 4
Score = 105 bits (53), Expect = 2e-22
Identities = 134/159 (84%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 10 atgtccttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatg 67
|||| |||||||||||||| ||| |||||| ||| | |||| |||||| ||||||||||
Sbjct: 2 atgtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatg 61
Query: 68 ttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatatgag 127
||||||||||||| | |||||||| | |||||||||||| | |||||||| || || |
Sbjct: 62 ttaatgaatctag--acatatatatctatctagattcattaatatcaatatgaatgtggg 119
Query: 128 aaatattaaaatgacttacattgtgaaacagagggagta 166
|||| || ||||||||||||||||| || |||||||||
Sbjct: 120 aaatgctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 121 bits (61), Expect = 3e-27
Identities = 97/108 (89%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 52 atattgatattaatgaatctagatagatatatat--gtctagattcattaacatcaatat 109
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 110 gaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/151 (83%), Gaps = 5/151 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | || |||||||||||| |||||||||||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaa 93
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||| | |||||||| | |||||||||||| | |||||||| || || |||| | ||
Sbjct: 92 tctag--acatatatatctatctagattcattaatatcaatatgaatgtgggaaa-acta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||| ||||||||||| |||| |||||||||
Sbjct: 35 gaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 133/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 97
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||||||||||| |||||||| || |||||||||| |||||||||| ||||| ||||
Sbjct: 96 gaatctagataaatatatat--gtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 133 ttaaaatgacttacattgtgaaacagagggagtac 167
|| |||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtac 4
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/151 (84%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||||||| || |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||| || |||||||| | |||||||||||| |||||||||| || || ||||| ||
Sbjct: 70 tcta--tacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgcta 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 128 gaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 115 bits (58), Expect = 2e-25
Identities = 96/108 (88%), Gaps = 3/108 (2%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||| ||||||||||||||||| |||||| |||||||||||| |||| |||||
Sbjct: 53 atattgatggtaatgaatctagataga---atatatatctagattcattaacattaatat 109
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| ||||| ||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 110 aaatatgggaaatgttagaatgacttacattgtgaaacggagggagta 157
Score = 69.9 bits (35), Expect = 1e-11
Identities = 91/109 (83%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 58 tatattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaata 117
|||||| ||||||||||||||||||| |||| | | |||||||||||| ||||||||
Sbjct: 110 tatattaatgttaatgaatctagatatatat---tctatctagattcattaccatcaata 54
Query: 118 tagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| || |||||||| || |||||||||||||| ||||| |||| ||||
Sbjct: 53 tgaatgtgagaaatgctagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 96/108 (88%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatat--atatgtctagattcattaatatcaatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || |||||| || |||| ||||||||||||||| |||||||||
Sbjct: 111 gaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 108/126 (85%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 42 tagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtctaga 101
|||||||| |||||| |||||||| ||||||||||||| | |||||||| | ||||||
Sbjct: 127 tagtatttcccacattcatattgatattaatgaatctag--acatatatatctatctaga 70
Query: 102 ttcattgacatcaatatagata-tgagaaatattaaaatgacttacattgtgaaacagag 160
|||||| |||||||||| || ||| ||||| || |||||||||||||||||||| |||
Sbjct: 69 ttcattaacatcaatatttctagtga-aaatactagaatgacttacattgtgaaacggag 11
Query: 161 ggagta 166
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 117/136 (86%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatat 90
|||||||| | |||||||||||| || ||||||||| |||||||| |||||||||||||
Sbjct: 25 ataagtcattctagtattttccatattcatattgatgctaatgaatttagatagatatat 84
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
|| || |||||||||| ||||||||| ||||||||||| ||| ||||||||| ||||
Sbjct: 85 at--gtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattg 142
Query: 151 tgaaacagagggagta 166
|| ||| |||||||||
Sbjct: 143 tggaacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 117/136 (86%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatat 90
|||||||| | ||| ||||| ||||| |||||||| |||||||||||| ||||||||||
Sbjct: 138 ataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatatat 79
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
|| ||||||||||||| ||| ||||||| || || ||||| || ||||||||||||||
Sbjct: 78 at--gtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattg 21
Query: 151 tgaaacagagggagta 166
|||||| |||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/152 (82%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| ||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||| | |||||||| | | |||||||||| | |||||||| || ||| |||| ||
Sbjct: 70 tctag--acatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgcta 127
Query: 136 aaatgacttacattgtgaaacagagggagtac 167
||||||||| |||||| ||| ||||||||||
Sbjct: 128 gaatgacttatattgtggaacggagggagtac 159
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 113 bits (57), Expect = 8e-25
Identities = 94/106 (88%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 61 attgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatatag 120
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatat----atgtctagattcattaacatcaatatga 103
Query: 121 atatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||| ||||| |||||||||||| |||||||||| |||||||||
Sbjct: 104 atatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 58.0 bits (29), Expect = 4e-08
Identities = 72/86 (83%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatat 90
|||||||| ||||| |||| ||| || ||||||||||||||||||| |||| ||||
Sbjct: 129 ataagtcattttagcatttcccatattcatattgatgttaatgaatc----tagacatat 74
Query: 91 atatgtctagattcattgacatcaat 116
|| | |||||||||||| ||||||||
Sbjct: 73 atctatctagattcattaacatcaat 48
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 101/115 (87%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 52 cacatatatattgatgttaatgaatctagatagatatatatatgtctagattcattgaca 111
||||| ||||||||||||||| |||||| |||||||||||| ||||||||||||| |||
Sbjct: 117 cacatttatattgatgttaataaatctatatagatatatat--gtctagattcattaaca 60
Query: 112 tcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||| ||||| ||||| | |||||||||||||||||||| |||||||||
Sbjct: 59 tcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/108 (85%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||||||||||||||| | |||||| ||| | ||||| ||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagacatatatatctatat--agatttattaacatcaatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| || ||| ||| || |||||||||||||||||||| |||||||||
Sbjct: 111 aaatgtga--aatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||| | || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||||||||| ||||| ||||||||||||||||| ||||||||| ||| ||||||||
Sbjct: 67 gaatctagacggatat--atatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
||||||||||||||||||||||| |||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 123/151 (81%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| ||||| |||| ||||| ||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||| | |||||||| ||||||||||||| | || | ||| || || ||||| ||
Sbjct: 93 tctag--acatatatatccgtctagattcattaatataagtatgaatgtgggaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||| ||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||||||||||||||| | ||||||||||| ||||||||| || || |||||
Sbjct: 67 gaatctagatagatatatattt--ctagattcattaccatcaatattaatgtgggaaatt 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|||||||||||| |||||||||| |||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/152 (83%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| ||||| |||| |||||| ||||||||| |||||||
Sbjct: 153 cctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||||| ||| ||||||||||| || ||||||| || || ||||| ||
Sbjct: 93 tctagaaatatatatctat--ctagattcattaacgtcaatatgaatgtgggaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 101/115 (87%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 52 cacatatatattgatgttaatgaatctagatagatatatatatgtctagattcattgaca 111
||||| ||||||||||||||| |||||| |||| ||||||||||||||||||||| |||
Sbjct: 44 cacatttatattgatgttaataaatctatatag--atatatatgtctagattcattaaca 101
Query: 112 tcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||| ||||| ||||| | |||||||||||||||||||| |||||||||
Sbjct: 102 tcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagta 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/108 (85%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||||||||||||||| | |||||| ||| | ||||| ||| ||||||||||
Sbjct: 108 atattgatgttaatgaatctagacatatatatctatat--agatttattaacatcaatat 51
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| || ||| ||| || |||||||||||||||||||| |||||||||
Sbjct: 50 aaatgtga--aatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | ||| |||| |||||| ||||| ||||||||
Sbjct: 7 cttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||||||||||| ||||||||||||||||| |||||||||| || ||| ||||
Sbjct: 67 gaatctagatagatat--atatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| |||| |||| |||||||||| |||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/121 (83%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
||||| ||||| |||||||||| ||||||||||||| | |||||| ||| |||||||||
Sbjct: 123 atttttcacatttatattgatgataatgaatctagacatatatatctat--ctagattca 66
Query: 106 ttgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagt 165
|| |||| ||||| || || ||||| || ||||||||| |||||||||| |||| |||
Sbjct: 65 ttaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacggaggaagt 6
Query: 166 a 166
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 107 bits (54), Expect = 5e-23
Identities = 99/113 (87%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 54 catatatattgatgttaatgaatctagatagatatatatatgtctagattcattgacatc 113
|||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 52 catacatagtgatgttaatgaatctagatagatat--atatgtctagattcattaacatc 109
Query: 114 aatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| ||| || || ||||| || |||||||||||||||||||| |||||||||
Sbjct: 110 actatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 127/156 (81%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| ||| |||||||||||||
Sbjct: 157 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 98
Query: 76 tctagatagatatatatatgtctagattcattgacatca----atatagatatgagaaat 131
||||| | |||||||| | |||||||||||| |||||| ||| ||||| |||||
Sbjct: 97 tctag--acatatatatctatctagattcattaacatcactatgtatgaatatgcgaaat 40
Query: 132 attaaaatgacttacattgtgaaacagagggagtac 167
|| |||||||||||||||||||| |||| |||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 105/121 (86%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||
Sbjct: 123 attttccacattcatattgatattaatgaatctaaatagatatatat--gtctagattca 66
Query: 106 ttgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagt 165
|| |||||| ||| || || ||||| || |||||||||||||||||||| ||||||||
Sbjct: 65 ttaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 166 a 166
|
Sbjct: 5 a 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/151 (82%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| ||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||||| ||| | ||||||||| | |||||||| || || |||| |||
Sbjct: 70 tctagacatatatatctattt--agattcattaatatcaatatgaatgtggaaaatgtta 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||||||||||| |||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|| ||||||||| ||||||||||||||||||||| ||||||||| |||| ||||
Sbjct: 67 gactctagatag--atatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| ||||||||| |||||||||| |||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||| |||||||||||| | |||||||| | |||||| ||||| |||||||||
Sbjct: 110 atattgatgctaatgaatctag--acatatatatctatctagagtcattaacatcaatac 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || |||| || |||||||||||||||||||| |||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | ||| |||| ||||| |||||||| ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||||||||||||||| ||||||||||||| ||||||||| || || ||||
Sbjct: 67 gaatctagatagatatatat--gtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
||| |||||||||||||||||||| |||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 101/122 (82%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||| ||||||||||||| | |||||| ||| |||||||||
Sbjct: 123 atttaccacattcatattgatgctaatgaatctagacatatatatctat--ctagattca 66
Query: 106 ttgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagt 165
|| |||||||| || |||||||| || ||||||||| |||||||||| |||| |||
Sbjct: 65 ttagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagt 6
Query: 166 ac 167
||
Sbjct: 5 ac 4
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 103 bits (52), Expect = 8e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 94 tgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtga 153
|||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 154 aacagagggagtacgt 169
||| ||||||||||||
Sbjct: 135 aacggagggagtacgt 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 109 acatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagtacg 168
||||||||||| || ||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggagtacg 3
Query: 169 t 169
|
Sbjct: 2 t 2
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| |||||| ||||| |||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||||||| ||||||||||||||||||||| |||| ||||| || || |||
Sbjct: 67 gaatctagatag--atatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| |||||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/152 (82%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||| ||||||| ||||| |||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||||| ||| ||||||||||| ||| ||||| || || ||||| ||
Sbjct: 93 tctagacatatatatctat--ctagattcattaacactaatatgaatgtgggaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||| |||| |||||
Sbjct: 35 aaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||| |||||| |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||| ||| |||||| ||||||||||||||| ||||| |||| || |||||||| ||
Sbjct: 93 tctaaata--tatatagatgtctagattcattaacatctatatgaatgtgagaaatgata 36
Query: 136 aaatgacttacattgtgaaacagagggagtacg 168
|||||||||||| |||||||| |||||||||||
Sbjct: 35 aaatgacttacaatgtgaaacggagggagtacg 3
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/108 (83%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | ||||||||| | |||||||| ||||| ||||
Sbjct: 53 atatagatgttaatgaatctagacatctatatatattt--agattcatcaacatctatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || ||||| || |||||||||||||||||||| |||||||||
Sbjct: 111 gaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 84/94 (89%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 74 aatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatat 133
||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 95 aatctagatagatatatat--gtctagattcattaacatcaatatgaatatgagaaatgc 38
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
|| ||||||||||||| |||||| ||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatat 90
||||||||||||||||||||||| | ||||||
Sbjct: 53 atattgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/155 (83%), Gaps = 5/155 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||| | ||| |||||| |||||||||| |||||||||| || || |||||
Sbjct: 67 gaatctagc---acatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 133 ttaaaatgacttacattgtgaaacagagggagtac 167
|| |||||||||||||||||||| ||||||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagtac 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/151 (82%), Gaps = 5/151 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||||||||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||| | | ||| ||| || ||||||||||| |||||||||| || || ||||| ||
Sbjct: 92 tctaaaca--tatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 104/121 (85%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 47 ttttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattcat 106
|||||||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 41 ttttccacattcatattaatgttaatgaatctagataaatatatatat--ctagattcat 98
Query: 107 tgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| | |||||||| || || ||||| || ||||||||| |||||||||| |||||||||
Sbjct: 99 taatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
Query: 167 c 167
|
Sbjct: 159 c 159
Score = 75.8 bits (38), Expect = 2e-13
Identities = 131/160 (81%), Gaps = 4/160 (2%)
Strand = Plus / Minus
Query: 9 aatgtccttcctccgtttcagaata--agtcagtttagtattttccacatatatattgat 66
||||| || ||||||||||| |||| ||||| | ||| |||| |||||| ||||||||
Sbjct: 162 aatgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 103
Query: 67 gttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatatga 126
||||||||||||||| |||||||| | |||||||||||| |||| ||||| || ||
Sbjct: 102 attaatgaatctagat--atatatatttatctagattcattaacattaatatgaatgtgg 45
Query: 127 gaaatattaaaatgacttacattgtgaaacagagggagta 166
||| ||| ||||||||| |||||||||| |||| ||||
Sbjct: 44 aaaaagttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/101 (88%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 67 gttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatatga 126
|||||||||||||||||||||||||| ||||||||||||| | |||||||| || ||
Sbjct: 102 gttaatgaatctagatagatatatat--gtctagattcattaatatcaatatgaatgtgg 45
Query: 127 gaaatattaaaatgacttacattgtgaaacagagggagtac 167
||||| || |||||||||||||||||||| ||||||||||
Sbjct: 44 gaaatgatagaatgacttacattgtgaaacggagggagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 99/121 (81%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| |||||||| ||||||||||||| | |||||||| | ||||||||||
Sbjct: 40 atttcccacattcatattgatattaatgaatctag--acatatatatctatctagattca 97
Query: 106 ttgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagt 165
|| || |||| || |||||||| || |||||||||||||||||||| |||| |||
Sbjct: 98 ttaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagt 157
Query: 166 a 166
|
Sbjct: 158 a 158
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 90 tatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacatt 149
|||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 150 gtgaaacagagggagta 166
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| || || |||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaat 66
Query: 73 gaatctaga 81
|||||||||
Sbjct: 67 gaatctaga 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 134 taaaatgacttacattgtgaaacagagggagta 166
|||||||||||| |||||||||| |||||||||
Sbjct: 107 taaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| ||||||||||||||||| | ||||| ||||||||||||||||| |||| |||||
Sbjct: 53 atatggatgttaatgaatctagttggatat--atatgtctagattcattaacattaatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| |||||||| || |||||||||||||||||||| |||||||||
Sbjct: 111 gaatgtgagaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 90/109 (82%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||| ||||||||||||||||| | |||||| | ||||||||||| ||||| ||||
Sbjct: 110 atattaatgttaatgaatctagacatatatatccaa--ctagattcattaacatccatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
||||| | ||| || |||||||||||||||||||| |||| |||||
Sbjct: 52 gaatatgggtaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
|||||||||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 81 atatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacat 140
Query: 149 tgtgaaacagaggga 163
|||||||| ||||||
Sbjct: 141 tgtgaaacggaggga 155
Score = 71.9 bits (36), Expect = 3e-12
Identities = 88/105 (83%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||| |||||||||||| | ||||| |||||||||||||| || |||||||
Sbjct: 110 atattgatgtcaatgaatctagaca--tatatgtatgtctagattcancgatttcaatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagaggga 163
|| ||||| || || |||||||||||||||||||| ||||||
Sbjct: 52 gaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 93.7 bits (47), Expect = 8e-19
Identities = 115/137 (83%), Gaps = 8/137 (5%)
Strand = Plus / Minus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatat 90
|||||||| ||||| ||||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 132 ataagtcattttagcattttccacatttatattgatgctaatgaatctag--agatata- 76
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
|||| ||||||| ||||||| || || |||||||| |||||||||||||||||
Sbjct: 75 -----tctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattg 21
Query: 151 tgaaacagagggagtac 167
|||||| |||| |||||
Sbjct: 20 tgaaacggaggaagtac 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
|||||| |||||||||||| |||||||||| || || |||| |||||||||||| ||
Sbjct: 75 atatatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatat 134
Query: 149 tgtgaaacagagggagta 166
|||||||| |||||||||
Sbjct: 135 tgtgaaacggagggagta 152
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 8e-19
Identities = 114/136 (83%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 32 taagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatata 91
||||||| | ||| |||||| |||| |||||||||||||||||| |||| |||||
Sbjct: 26 taagtcattctagcattttctacattcatattgatgttaatgaat----gtagacatata 81
Query: 92 tatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgt 151
|||||||||||||||| |||||||||| || || ||||| || |||||||||||||||
Sbjct: 82 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 141
Query: 152 gaaacagagggagtac 167
| ||| ||||||||||
Sbjct: 142 ggaacggagggagtac 157
Score = 67.9 bits (34), Expect = 4e-11
Identities = 74/87 (85%), Gaps = 4/87 (4%)
Strand = Plus / Minus
Query: 32 taagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatata 91
||||||| | ||| |||| |||||| ||||||||||||||||||| |||| |||||
Sbjct: 135 taagtcattctagcatttcccacattcatattgatgttaatgaatc----tagacatata 80
Query: 92 tatgtctagattcattgacatcaatat 118
|||||||| ||||||| ||||||||||
Sbjct: 79 tatgtctacattcattaacatcaatat 53
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/151 (83%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||||||| ||||||||||||||||||||| ||||||||| || || ||||| |
Sbjct: 70 tctagatag--atatatatgtctagattcattaccatcaatatgaatgtgggaaatggtg 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| || ||||||
Sbjct: 128 gaatgacttacattatgaaacggaaggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 102/121 (84%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||| ||||||||||||| | |||||| ||| |||||||||
Sbjct: 123 atttcccacattcatattgatggtaatgaatctagacatatatatctat--ctagattca 66
Query: 106 ttgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagt 165
|| ||| |||||| || || ||||| || |||||||||||||||||||| ||||||||
Sbjct: 65 ttaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 166 a 166
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/151 (83%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| ||||| || ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
| ||| || |||| ||||||||||||||||| |||||||||| || || ||||| ||
Sbjct: 70 tttagctaaatat--atatgtctagattcattaacatcaatatgaatgtgggaaatgcta 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 122/151 (80%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||| | |||||||| | ||| ||| ||| | || ||||| || || |||| ||
Sbjct: 93 tctag--acatatatatttagctaaatttattaatataaatatgaatgtggaaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 35 taatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 93/108 (86%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 110 atattgatgctaatgaatctagatagatat--atatgtctagattcattggcatcgatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || |||| || ||||||||||||| |||||| |||||||||
Sbjct: 52 gaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/151 (82%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||||| ||| ||||||||||| ||||||||| ||| ||| |||| ||
Sbjct: 70 tctagacatatatatctat--ctagattcattagcatcaatatggatgtgaacaatagta 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 128 gaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 93/108 (86%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 53 atattgatgttaatgaatctagatag--atatatatgtctagattcattaatatcaacat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| | |||| || |||||||||||||||||||| |||||||||
Sbjct: 111 gaatttagaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/106 (85%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatataga 121
||||| |||||||||||||| | |||||| ||| ||||||||||| |||||||||| |
Sbjct: 107 ttgatattaatgaatctagacatatatatctat--ctagattcattaacatcaatatgaa 50
Query: 122 tatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
| |||||||| || |||||||||||||||||||| || |||||||
Sbjct: 49 tgtgagaaatggtagaatgacttacattgtgaaacggaaggagtac 4
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/60 (95%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 27 atattgatgttaatgaatctagatag--atatatatgtctagattcattaacatcaatat 84
Score = 73.8 bits (37), Expect = 7e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 33 aagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatatat 92
|||||| | ||| |||| |||||| |||||||||||||||||||||| | ||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctag--acatatatat 53
Query: 93 atgtctagattcattgacatcaatatagatatgagaaatattaaaatgactt 144
| |||||||||||| |||||||||| || |||||||| || ||||||||
Sbjct: 52 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/151 (83%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||||||||| ||||| |||| |||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||||| | |||||||||||||||||||||| |||| |||| || || |||| ||
Sbjct: 93 tctagat--aaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 35 gaatgacttacattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/151 (82%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | |||||| ||| ||||||||||| |||| |||| ||| ||| ||||| ||
Sbjct: 70 tctagacatatatatttat--ctagattcattagcatcgatatggatgtgaaaaatacta 127
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 128 gaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 97/110 (88%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatag--atatagatgtctatattcattaacatcaatat 110
Query: 119 agatatgagaaatat--taaaatgacttacattgtgaaacagagggagta 166
|| ||| | ||||| || |||||||||||||||||||| |||||||||
Sbjct: 111 -ga-atgcggaatatgctagaatgacttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||| |||| | ||||| ||| ||||||||||| ||||||||||
Sbjct: 110 atattgatgttaatgaatatagacatctatatctat--ctagattcattaacatcaatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||| ||||| || |||||||||||||||||||| |||| ||||
Sbjct: 52 gaatataggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 109 acatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 62 acatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 109 acatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||||| ||||||||||| |||||||||||| |||||||||| |||| ||||
Sbjct: 65 acatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 135 cggagggagta 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||||| |||| |||||
Sbjct: 37 taaaatgacttacattgtgaaacggaggaagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 58 tatattgatgttaatgaatctagatagat 86
||||||||||||||| |||||||||||||
Sbjct: 98 tatattgatgttaataaatctagatagat 70
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | |||||||| |||||| |||||||| ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||||||||||||||||| |||||||| ||||| ||||||||| || || |||||
Sbjct: 67 gaatctagatagatata-----gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
| ||||||||||||| |||||| |||||||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||| || || |||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 156 cagagggagta 166
| |||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| |||||| ||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 15 cggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||||||||| || || |||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaa 69
Query: 76 tctagat 82
|||||||
Sbjct: 70 tctagat 76
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||| |||||||||||||| |||||||||
Sbjct: 117 aatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 85 atatatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgactt 144
|||||||| | |||||||||||| |||||||||| |||||||||||| || ||||||||
Sbjct: 86 atatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgactt 27
Query: 145 acattgtgaaacagagggagtac 167
| |||||||||| |||| |||||
Sbjct: 26 atattgtgaaacggaggaagtac 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | |||||||| || || |||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgataat 66
Query: 73 gaatctagatagatatatat 92
||||||||||||||||||||
Sbjct: 67 gaatctagatagatatatat 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
||||||||||||| |||||| ||||||||||
Sbjct: 99 aatgacttacattatgaaacggagggagtac 129
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 33 aagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatatat 92
|||||| | ||| |||| |||||| ||||||||||||||||||||| |||||||| ||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatat--at 53
Query: 93 atgtctagattcattgacatcaatat 118
||||||||||||||| ||||||||||
Sbjct: 52 atgtctagattcattaacatcaatat 27
Score = 61.9 bits (31), Expect = 3e-09
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 33 aagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatatat 92
|||||| | ||| |||| |||||| |||||||||||||||||||||| | ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctag--acatatatat 58
Query: 93 atgtctagattcattgacatcaatat 118
| | |||||||||| ||||||||||
Sbjct: 59 ctatttagattcattaacatcaatat 84
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 90 tatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacatt 149
||||||||||||||||||||||| ||||| || |||||||| || |||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 150 gtgaaacagaggga 163
||||||| ||||||
Sbjct: 122 gtgaaacggaggga 135
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 109 acatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagaggga 163
|||||||||| || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 94 tgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtga 153
|||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 154 aacagagggagtac 167
||| ||||||||||
Sbjct: 127 aacggagggagtac 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctaga 81
|||||||||||||||||||||||
Sbjct: 91 atattgatgttaatgaatctaga 69
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| ||||| ||| || ||||||||||||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaat 69
Query: 73 gaatctagatagatata 89
|||||||||||||||||
Sbjct: 68 gaatctagatagatata 52
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 156 cagagggagta 166
| |||| ||||
Sbjct: 120 cggaggaagta 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 127 gaaatattaaaatgacttacattgtgaaacagagggagtac 167
|||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 44 gaaatactaaaatgacttacattgttaaacggagggagtac 4
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 94 tgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtga 153
|||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 154 aacagagggagtac 167
||| ||||||||||
Sbjct: 17 aacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctaga 81
|||||||||||||||||||||||
Sbjct: 53 atattgatgttaatgaatctaga 75
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||||| ||| |||||||||||||||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaat 69
Query: 73 gaatctagatagatat 88
||||||||||||||||
Sbjct: 68 gaatctagatagatat 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| ||||||||||| | ||| |||| || |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 156 cagagggagta 166
| |||| ||||
Sbjct: 120 cggaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 124 tgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
||||||||| || ||||||||||||||| |||| ||||||||||
Sbjct: 47 tgagaaatactagaatgacttacattgttaaacggagggagtac 4
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||| ||||||| |||| |||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||| |||||| || || | |||||||||||||| ||||| |||| ||||| | |||
Sbjct: 67 gaatttagata--tagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| ||||||||||||| |||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 88 tatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttaca 147
|||||||||||||||||||| |||||||||| || || ||||| || |||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 148 ttgtgaaacagagggagtac 167
||||||||| |||| |||||
Sbjct: 23 ttgtgaaacggaggtagtac 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 76 tctaga 81
||||||
Sbjct: 70 tctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 111 aatgacttacattgtgaaacggaggaagtac 141
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| | |||| | ||| ||| ||||||| |||| |||| ||||
Sbjct: 7 cttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||||| | |||||||| ||||||||||||| |||||||||| || || ||||
Sbjct: 67 gaatctaggca--tatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| |||||||||||||||||||| |||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 79/92 (85%), Gaps = 4/92 (4%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcatt 107
||||| | |||||||||| |||||||||||
Sbjct: 93 tctag--acttatatatatgcctagattcatt 64
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 87 atatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttac 146
||||||||||||||||||||| |||| |||||| || || ||||| || ||||||||||
Sbjct: 84 atatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttac 25
Query: 147 attgtgaaacagagggagta 166
|||||||||| |||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| |||||| ||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaat 66
Query: 73 gaatctagatagatatat 90
||||||||| | ||||||
Sbjct: 67 gaatctagacatatatat 84
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| |||||||||| || || ||||| || |||||||||||||||||||| | |
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 161 ggagtac 167
|||||||
Sbjct: 143 ggagtac 149
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 156 cagagggagtac 167
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| ||||| ||||| || ||||||||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 156 cagagggagta 166
| |||| ||||
Sbjct: 130 cggaggaagta 140
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| ||| || ||||||||||||||
Sbjct: 138 cttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaat 79
Query: 73 gaatctagat 82
||||||||||
Sbjct: 78 gaatctagat 69
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagat 82
||||||||||||||||||||||||
Sbjct: 53 atattgatgttaatgaatctagat 76
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 128 cttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaat 69
Query: 73 gaatcta 79
|||||||
Sbjct: 68 gaatcta 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| |||||||||| || || ||||| |||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 158 gagggagta 166
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 135 aaaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||||| |||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/53 (86%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgt 68
||||||||||| ||| |||||| ||| ||||||||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| ||||| | ||||||| |||||| |||| |||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||||||||| | ||||||| |||||||||||||| ||||| |||| ||||||| |||
Sbjct: 67 gaatctagaca--tatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| || | |||||||| |||||| |||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/108 (83%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | |||||||| ||||||||||||| ||||| ||||
Sbjct: 110 atatagatgttaatgaatctagacacatatatat--gtctagattcattaacatctatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || | |||| || || |||||||||| |||||| |||| ||||
Sbjct: 52 gaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 5e-14
Identities = 127/155 (81%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | ||| |||| |||| | |||||||||||||||
Sbjct: 154 cttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaat 95
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||||| || | || ||| ||||||||||| |||||||||| || || |||||
Sbjct: 94 gaatctggacatatgcctat----ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ttaaaatgacttacattgtgaaacagagggagtac 167
|| |||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtac 4
Score = 77.8 bits (39), Expect = 5e-14
Identities = 124/151 (82%), Gaps = 6/151 (3%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
||||||||| ||||||| ||||||||| ||||||||||| | || ||||| ||
Sbjct: 70 tctagatag----gcatatgtccagattcattaacatcaatataaacgtgggaaatgcta 125
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||| |||||||||| |||| ||||
Sbjct: 126 gaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 77.8 bits (39), Expect = 5e-14
Identities = 123/151 (81%), Gaps = 10/151 (6%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||| |||||| |||||||||| ||||||
Sbjct: 147 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaa 88
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| |||| |||||||||||||||||||||||| || || ||||| ||
Sbjct: 87 tctagacagat--------gtctagattcattgacatcaatatgaatgtgggaaatgata 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 94 tgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtga 153
||||||||||||||||||||||||| || || ||||| || ||||||||||||| |||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatga 139
Query: 154 aacagagggagta 166
||| |||||||||
Sbjct: 140 aacggagggagta 152
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || || ||||| ||| |||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 126 cggagggagta 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatat 88
|||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 101 atttcccacattcatattgatgttaatgaatctagatagatat 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 111 atcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
|||||||| ||||| ||||| || |||||||||||||||||||| |||| |||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 90 tatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacatt 149
|||||||||||||||||| |||||||||| || || ||||| || |||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 150 gtgaaacagagggagtac 167
||||||| |||| |||||
Sbjct: 21 gtgaaacggaggaagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 73 gaatctaga 81
|||||||||
Sbjct: 67 gaatctaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 acttacattgtgaaacagagggagta 166
|||||||||||||||| |||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 66 tgttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatatg 125
|||||||||||||||||| |||||| ||||||||||||||| ||| | |||| || ||
Sbjct: 60 tgttaatgaatctagata--tatatagatgtctagattcattaacacctatatgaatgtg 117
Query: 126 agaaatattaaaatgacttacattgtgaaacagagggagta 166
|||| || |||||||||||||||||||| |||||||||
Sbjct: 118 gaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 123/151 (81%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||| | ||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||| | ||||||||| ||||||||||| ||| | |||| || || ||||| |||
Sbjct: 93 tctagacatctatatatat--ctagattcattaacacctatatgaatgtgggaaatgtta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||||||| || ||| || ||||||
Sbjct: 35 gaatgacttacattatggaacggaaggagta 5
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
|||| |||||||||||||| |||||||||| || ||||||||| || ||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 149 tgtgaaacagagggagta 166
| |||||| |||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | |||||||| ||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaat 66
Query: 73 gaatctaga 81
|||||||||
Sbjct: 67 gaatctaga 75
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 93 atgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtg 152
||||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 153 aaacagagggagta 166
||| |||||||||
Sbjct: 18 gaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 32 taagtcagtttagtattttccacatatatattgatgttaatgaatctaga 81
||||||| | ||| |||| ||| || |||||||||| |||||||||||||
Sbjct: 26 taagtcattatagcatttcccatatttatattgatgctaatgaatctaga 75
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 94 tgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtga 153
||||||||||||||||||||||||| || || ||||| || |||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 154 aacagagggagta 166
||| |||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| |||||||||| |||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaat 66
Query: 73 gaatctaga 81
|||||||||
Sbjct: 67 gaatctaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 106 aatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 128/157 (81%), Gaps = 6/157 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| |||||| || | |||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||||| ||| ||||||||| |||||||||| ||||| |||| || ||| ||||
Sbjct: 67 gaatc----aagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 133 ttaaaatgacttacattgtgaaacagagggagtacgt 169
||||||||||| |||| |||||| ||||||||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagtacgt 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 123/151 (81%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| ||||| ||||| ||||| |||| ||||||||||||
Sbjct: 151 cctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaa 92
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||| | ||||||||||| |||||||| ||||| | || || || ||||| ||
Sbjct: 91 tctatgca----tatatatgtcttgattcattaacatctacatgaatgtgggaaatgcta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||||||||||||||| |||| ||||
Sbjct: 35 aaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 127/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||| |||||||||||| |||||||||
Sbjct: 156 cttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaat 97
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
|||| ||||| ||| || | |||||||||||||| ||||| |||| || | | |||
Sbjct: 96 gaatttagat--atagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 133 ttaaaatgacttacattgtgaaacagagggagtac 167
|| ||||||||||||| |||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 88/108 (81%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | | || |||| |||| ||||||| ||||| ||||
Sbjct: 53 atatagatgttaatgaatctagacacacatctata--tctaaattcattaacatctatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
| || || | ||| || ||||||||||||| |||||| |||| ||||
Sbjct: 111 atatgtgggcaatgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 87 atatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttac 146
|||||||| |||||||| ||| |||||| ||| || || |||||| || ||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 147 attgtgaaacagagggagtac 167
||| |||||||||||||||||
Sbjct: 125 attatgaaacagagggagtac 145
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 110 catcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||||| || ||| |||| ||||||||||||||||| ||||||||||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 110 catcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||| || ||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| |||||||||| || || ||||| || |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 158 gagggagta 166
|||||||||
Sbjct: 122 gagggagta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 32 taagtcagtttagtattttccacatatatattgatgttaatgaatcta 79
||||||| | ||| |||| |||||| |||||||||||||||||||||
Sbjct: 109 taagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||| ||||||||||||||| ||||
Sbjct: 30 aatgacttatattgtgaaacagaggaagta 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaat 72
|||||||| | ||| ||||||||||| ||||||||||||||
Sbjct: 21 ataagtcattatagcattttccacattcatattgatgttaat 62
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||||| ||| | |||||||||||||||| ||||| ||||
Sbjct: 110 atatggatgttaatgaatctagata--tatgtctatgtctagattcattaacatctatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||| | ||| || ||||||||||||| |||||| |||||||||
Sbjct: 52 gaatataggcaatgctagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 88/108 (81%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| ||||||||||||||||| | ||| | |||| |||||||||||| ||||| ||||
Sbjct: 53 atatagatgttaatgaatctag--acatagacatatatctagattcattaacatccatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| |||| | | || ||||||||||||| |||||| |||| ||||
Sbjct: 111 gaatgtgagcattgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 95 gtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaa 154
||||||||||||| |||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 155 acagagggagta 166
|| |||||||||
Sbjct: 134 acggagggagta 145
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 97 ctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaac 156
||||||| ||| ||||||||||| || |||||||| || ||||||||||||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 157 agagg 161
||||
Sbjct: 14 ggagg 10
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||||||| || |||||||||||||||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 81
Query: 76 tctaga 81
||||||
Sbjct: 80 tctaga 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/68 (85%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| ||||| |||||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaat 66
Query: 73 gaatctag 80
|||||||
Sbjct: 67 aaatctag 74
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 95 gtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaa 154
||||||||||||| ||||||||| ||||| |||||| || ||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 155 acagagggagta 166
|| |||||||||
Sbjct: 125 acggagggagta 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 110 catcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||| |||||||||||| || ||| |||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | |||||||| ||| || ||||||||| |||||||
Sbjct: 131 cctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaa 72
Query: 76 tctaga 81
||||||
Sbjct: 71 tctaga 66
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
|||||| |||||||||| |||||||||| || || ||||| ||| ||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 151 tgaaacagagggagta 166
|||||| ||| |||||
Sbjct: 20 tgaaacggagagagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||| ||||||
Sbjct: 114 aatgacttacattgtgaaacggagagagtac 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatcta 79
|||| |||||| |||||||||||||||||||||
Sbjct: 40 atttcccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| | |||||||| || |||||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 156 cagagggagtac 167
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 104 cattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagaggga 163
||||||||||||||| ||||| ||||| || |||||||||||||||||||| |||| |
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 164 gta 166
|||
Sbjct: 140 gta 142
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 92 tatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgt 151
||||||||| |||||| |||||||||| || || ||||| || |||||||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 152 gaaacagagggagta 166
||||| |||||||||
Sbjct: 132 gaaaccgagggagta 146
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||||||||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaat 66
Query: 73 gaatcta 79
|||||||
Sbjct: 67 gaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 32 taagtcagtttagtattttccacatatatattgatgttaatgaatctaga 81
||||||| | ||| |||| |||||| ||||||||||||||||| |||||
Sbjct: 125 taagtcattctagcatttcccacattcatattgatgttaatgaaactaga 76
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || || ||||| |||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 15 cggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| |||| |||| |||||| |||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 69
Query: 76 tctagat 82
|||||||
Sbjct: 70 tctagat 76
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| |||| |||| || ||||||||| |||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 156 cagagggagtacgt 169
| |||| |||||||
Sbjct: 136 cggaggaagtacgt 149
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || || ||||| || |||||||||||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 138
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 139 cggagggagta 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 93 atgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtg 152
||||||||||||||| |||||||||| || || ||||| || ||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 153 aaacagagggagta 166
|||| |||| ||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || || ||||| |||||||||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 136 cggagggagta 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| |||| |||| |||||| |||||||||||||||||
Sbjct: 141 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 82
Query: 76 tctagat 82
|||||||
Sbjct: 81 tctagat 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| |||| |||| || ||||||||| |||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 156 cagagggagtacgt 169
| |||| |||||||
Sbjct: 15 cggaggaagtacgt 2
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || || ||||| ||| ||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 125 cggagggagta 135
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagata 83
|||| |||||| |||||||||||||||||||||||||
Sbjct: 100 atttcccacattcatattgatgttaatgaatctagata 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/58 (86%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgtta 70
|||||||||||||| |||| ||||| | ||| ||||||||||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 88 tatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttaca 147
|||| ||||||||||| ||| |||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 148 ttgtgaaacagagggagta 166
||||||||| |||| ||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| ||| || ||||||||||||||
Sbjct: 134 cttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaat 75
Query: 73 gaatctaga 81
||||||||
Sbjct: 74 aaatctaga 66
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| ||||||||| |||||| |||| |||||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 156 cagagggagtacgt 169
||||||||||||
Sbjct: 96 tggagggagtacgt 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 110 catcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
||||||||| |||||| ||||| |||||||||||||||| |||||| ||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtac 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||| ||||||| |||||||||| ||||| |||| ||| |||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 156 cagagggagta 166
| |||| ||||
Sbjct: 15 cggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | || |||||||| || ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaat 66
Query: 73 gaatctagatag 84
|||| |||||||
Sbjct: 67 gaatgtagatag 78
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 105 attgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggag 164
|||||||||||||| || ||| ||||| || |||||||||||||||||||| |||||||
Sbjct: 66 attgacatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggag 7
Query: 165 ta 166
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 82 tagatatatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatga 141
|||| |||||||| |||||||||||| |||| | ||| || ||| |||| || |||||
Sbjct: 72 tagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgctagaatga 131
Query: 142 cttacattgtgaaacagagggagtac 167
||||||||||||||| ||||||||||
Sbjct: 132 cttacattgtgaaacggagggagtac 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 121/151 (80%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||| ||||| ||| | |||||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaa 92
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
|||||||| |||||||||||| ||||||| |||| | ||| || || ||||| |
Sbjct: 91 tctagata----tatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcca 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
||||||||| |||||||||| |||| ||||
Sbjct: 35 gaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 91/109 (83%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||||| || | |||||| |||||||||| |||| ||||
Sbjct: 53 atatagatgttaatgaatctagata--tagacatatgtttagattcattaccatctatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
|| || | ||| |||||||||||||||| |||||| ||||||||||
Sbjct: 111 gaatgtgggcaatgctaaaatgacttacattatgaaacggagggagtac 159
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
||||||||||||||||||| ||||| |||| ||||| | |||| || || | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 149 tgtgaaacagagggagta 166
|||||||| |||||||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 88/109 (80%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| ||||||||||||||||| | |||||| |||||| ||||||| ||||| ||||
Sbjct: 110 atatagatgttaatgaatctag--acatatatgcgtgtctaaattcattaacatctatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
||||| | | || || || | ||||||| ||||||| ||||||||||
Sbjct: 52 gaatatgggcagtactagaaagtcttacatggtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
||||| ||||||||||||| | ||| |||| ||||| | ||||||| ||||||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 149 tgtgaaacagagggagta 166
| |||||| |||||||||
Sbjct: 22 tatgaaacggagggagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/154 (81%), Gaps = 11/154 (7%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | |||||||| |||||| |||||||||||||||
Sbjct: 149 cttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaat 90
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||| || || ||| ||| ||| |||||| |||||||||| || || ||||||
Sbjct: 89 gaaact-------taaatagatg--tagtttcattaacatcaatatgaatgtgggaaata 39
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| ||||||||| |||||||||| |||||||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 102 ttcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagg 161
|||||| ||||||||||| || || |||||| || |||||||||||||||||||| ||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 162 gagta 166
||||
Sbjct: 147 aagta 151
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/154 (80%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaat 66
Query: 73 gaatctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaata 132
||||||||||| |||||||||||||||| ||||||||| || | |||||
Sbjct: 67 gaatctagata--------tatgtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 133 ttaaaatgacttacattgtgaaacagagggagta 166
|| ||||||||| |||||||||| |||||||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggagta 152
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
|||| |||||||||||| ||||||||| || || ||||| || ||||||||||||||
Sbjct: 80 atatatctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 151 tgaaacagagggagtac 167
|||||| |||| |||||
Sbjct: 20 tgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 91/109 (83%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | ||||| | |||||||||||||| ||||| ||||
Sbjct: 110 atatagatgttaatgaatctagaaa--tatatgtgtgtctagattcattaacatctatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
|| |||| ||| ||||| | |||||||| |||||| ||||||||||
Sbjct: 52 gaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagtac 4
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 91/109 (83%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | ||||| | |||||||||||||| ||||| ||||
Sbjct: 53 atatagatgttaatgaatctagaaa--tatatgtgtgtctagattcattaacatctatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
|| |||| ||| ||||| | |||||||| |||||| ||||||||||
Sbjct: 111 gaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagtac 159
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 82 tagatatatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatga 141
|||||| |||||||||||||| |||| |||||||||| || || ||||| || |||||
Sbjct: 45 tagatagatatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatga 104
Query: 142 cttacattgtgaaacagagggagta 166
|||||||| |||||| |||| ||||
Sbjct: 105 cttacattatgaaacggaggaagta 129
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||
Sbjct: 127 cttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaat 68
Query: 73 gaatctaga 81
| |||||||
Sbjct: 67 ggatctaga 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 132 attaaaatgacttacattgtgaaacagagggagta 166
||||| || |||||||||||||||| |||||||||
Sbjct: 39 attaatataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 125/154 (81%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||| |||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgag 69
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
| ||||||| ||| |||||||||||| |||||||||| ||||| |||| ||
Sbjct: 70 tttagatag--atacatatgtctagat------acatcaatatgaatatggaaaatgcta 121
Query: 136 aaatgacttacattgtgaaacagagggagtacgt 169
|||||||||||||||||||| |||| |||||||
Sbjct: 122 gaatgacttacattgtgaaacggaggaagtacgt 155
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/108 (83%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||| ||||||| |||| ||||||||||||||||| ||||| ||||
Sbjct: 53 atatagatgttaatgaacctagata--tatacatatgtctagattcattaacatctatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || ||| ||||| | ||||||||||||||| |||||||||
Sbjct: 111 gaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 104/128 (81%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 40 tttagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtcta 99
||||| ||| ||||||| |||| ||||||||||||||||| | |||| ||||| ||||
Sbjct: 129 tttaggattgtccacattcatatagatgttaatgaatctag--acatatgtatatatcta 72
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
| |||||| ||||| |||| ||||| | |||| || || | |||| ||| |||||| ||
Sbjct: 71 ggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacgga 12
Query: 160 gggagtac 167
||||||||
Sbjct: 11 gggagtac 4
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 102 ttcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagg 161
|||||| |||||||||| || |||||||| || |||||||||||||||||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 162 gagta 166
|||||
Sbjct: 145 gagta 149
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||||||||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaat 66
Query: 73 gaatcta 79
|||||||
Sbjct: 67 gaatcta 73
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || |||||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 156 c 156
|
Sbjct: 15 c 15
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| | ||||||||| ||||| |||| || ||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 158 gagggagta 166
|||||||||
Sbjct: 138 gagggagta 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/64 (85%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||||||| || ||||||||| ||||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaa 82
Query: 76 tcta 79
||||
Sbjct: 81 tcta 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagat 82
||||||||||||||||||||||||
Sbjct: 53 atattgatgttaatgaatctagat 76
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| | |||||||| ||||||||||| || ||||||||||||| ||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 158 gagggagta 166
|||||||||
Sbjct: 118 gagggagta 126
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || |||||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 156 c 156
|
Sbjct: 15 c 15
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| | ||||||||| ||||| |||| || ||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 158 gagggagta 166
|||||||||
Sbjct: 138 gagggagta 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/64 (85%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||||||| || ||||||||| ||||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaa 82
Query: 76 tcta 79
||||
Sbjct: 81 tcta 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagat 82
||||||||||||||||||||||||
Sbjct: 53 atattgatgttaatgaatctagat 76
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/108 (83%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||||| || | ||||| ||||||||||| ||||| ||||
Sbjct: 53 atatggatgttaatgaatctagatatatgtctatat--ctagattcattaacatctatat 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||| | ||| || ||||||||||||| |||||| |||||||||
Sbjct: 111 gaatataggcaatgctagaatgacttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| ||||||||||||||||||| ||| | |||| |||||||||||| ||||| ||||
Sbjct: 110 atatagatgttaatgaatctagat--atagacatatatctagattcattaacatccatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| |||| | | || ||||||||||||| |||||| |||| ||||
Sbjct: 52 gaatgtgagcattgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/108 (83%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | | |||||||| ||||||||||| ||||| || |
Sbjct: 53 atatagatgttaatgaatctagacacacatatatat--ctagattcattaacatctatgt 110
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || | ||| |||||| | ||||||||||||||| |||||||||
Sbjct: 111 gaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 7e-10
Identities = 86/103 (83%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 64 gatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagata 123
||||||||||||||||||| |||||| | |||||||||||||| ||||| |||| ||
Sbjct: 105 gatgttaatgaatctagat--atatatgtgtgtctagattcattaacatctatatgaatg 48
Query: 124 tgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||| ||| || | | ||||||||||||||| |||||||||
Sbjct: 47 tgagcaatgctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/108 (83%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||| ||||||| |||| ||||||||||||||||| ||||| ||||
Sbjct: 110 atatagatgttaatgaacctagata--tatacatatgtctagattcattaacatctatat 53
Query: 119 agatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|| || ||| ||||| | ||||||||||||||| |||||||||
Sbjct: 52 gaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 104/128 (81%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 40 tttagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtcta 99
||||| ||| ||||||| |||| ||||||||||||||||| | |||| ||||| ||||
Sbjct: 34 tttaggattgtccacattcatatagatgttaatgaatctag--acatatgtatatatcta 91
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
| |||||| ||||| |||| ||||| | |||| || || | |||| ||| |||||| ||
Sbjct: 92 ggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacgga 151
Query: 160 gggagtac 167
||||||||
Sbjct: 152 gggagtac 159
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 128 aaatattaaaatgacttacattgtgaaacagagggagta 166
||||| ||||||||||||||||||||||| |||| ||||
Sbjct: 43 aaatactaaaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||| ||||||||||||||| |||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
|||||||| |||||||||| || |||||||| || ||||| |||||||||||||| ||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 160 gggagtac 167
||||||||
Sbjct: 135 gggagtac 142
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
|||||||| |||||||||| || || ||||| || |||||||||||||||||||| ||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 160 gggagta 166
|| ||||
Sbjct: 11 ggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 73 gaatc 77
|||||
Sbjct: 67 gaatc 71
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
|||| |||||||||||||| |||| ||| || |||||| |||| |||||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 149 tgtgaaac 156
||||||||
Sbjct: 22 tgtgaaac 15
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatat 88
|||||||| ||||| ||||| || || || ||| ||||||||||||||||| ||||||
Sbjct: 25 ataagtcattttagcatttttcatatttacattaatgttaatgaatctagacagatat 82
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 128 aaatattaaaatgacttacattgtgaaacagaggg 162
|||| ||||||||||||| |||||||||| |||||
Sbjct: 92 aaatgttaaaatgacttatattgtgaaacggaggg 126
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatata 89
|||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 40 attttccacaattatattgatgttaatgaatctatatagatata 83
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| ||||||||||| | || |||| || ||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 158 gagggagtac 167
||||||||||
Sbjct: 13 gagggagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 138 atgacttacattgtgaaacagagggagta 166
||||||||||||||||||| |||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtacg 168
||||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacagagggagtacg 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 66 aatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| |||||| ||||||||||||||
Sbjct: 132 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaat 73
Query: 73 gaatctagata 83
||||| |||||
Sbjct: 72 gaatcaagata 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
|||||||| |||||||||| || || ||||| ||||||||||||||||||||||| ||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 160 gggagta 166
|| ||||
Sbjct: 128 ggaagta 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 135 aaaatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||||| || |||||||
Sbjct: 36 aaaatgacttacattgtgaaacggatggagtac 4
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| |||| |||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 156 cagagggagtac 167
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagata 83
|||||||||||||||||||||||||
Sbjct: 53 atattgatgttaatgaatctagata 77
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || |||||||| || ||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 156 cagagggagtac 167
| |||| |||||
Sbjct: 117 cggaggaagtac 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | ||| |||| ||||| ||||||||||||||
Sbjct: 125 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaat 66
Query: 73 gaatctagatag 84
||||||||||||
Sbjct: 65 gaatctagatag 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatat 88
|||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 41 atttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatg-acttacattgtgaa 154
|||||||||||| |||||||||| || || ||||| ||| | | ||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 155 acagagggagta 166
|| |||||||||
Sbjct: 16 acggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 111 atcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||| ||||| ||||| || |||||||||||||||||||| |||| ||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatat 88
||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 95 attttccacattcatattgatgttaatgaatctagatatatat 53
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
|||||| |||||||||||| |||||||||| || || |||| ||| | ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 149 tgtgaaacagagggagta 166
||||||| |||||||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 121 atatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||||| |||| |||||| ||||||||||| |||||||||
Sbjct: 50 atatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 87 atatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttac 146
||||||||||||||||||||| ||||||||| ||| | |||| ||||||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 147 attgtgaaacagagg 161
|||||||||| ||||
Sbjct: 113 attgtgaaacggagg 127
Score = 54.0 bits (27), Expect = 7e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| ||||| ||||||| || ||||||||| ||||
Sbjct: 130 cttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataat 71
Query: 73 gaatctagatagatatat 90
||||||||| | ||||||
Sbjct: 70 gaatctagacatatatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagag 160
||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacagag 11
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || || |||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 15 cggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 76 tctaga 81
||||||
Sbjct: 70 tctaga 75
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 88 tatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttaca 147
|||||||||||||||||||| | || ||||| || || ||||| || |||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 148 ttgtgaaacagagggagta 166
||||||||| |||| ||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaatggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/69 (84%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||| || |||||
Sbjct: 133 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaat 74
Query: 73 gaatctaga 81
|||||||||
Sbjct: 73 gaatctaga 65
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatat 88
||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 95 atttttcacattcatattgatgttaatgaatctagatagatat 53
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || ||| |||| || |||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 156 cagagggagta 166
| |||| ||||
Sbjct: 120 cggaggaagta 130
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||||||||||||||||||||
Sbjct: 94 aatgacttacattgtgaaacagagggagta 123
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| | ||||||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgttaat 66
Query: 73 ga 74
||
Sbjct: 67 ga 68
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 97 ctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaac 156
||||||||||| ||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 157 agagggagta 166
|||| ||||
Sbjct: 14 ggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| |||||| ||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaat 66
Query: 73 gaatctag 80
||||||||
Sbjct: 67 gaatctag 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 138 atgacttacattgtgaaacagagggagta 166
||||||||||||||||||| |||||||||
Sbjct: 115 atgacttacattgtgaaacggagggagta 143
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||||| ||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 79 aatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||||| ||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 127 gaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||| ||||||||||||||||||||||| |||| ||||
Sbjct: 70 gaaatactaaaatgacttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacat 148
||||||||||||||||||| ||||| |||| || || | |||| || || | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacat 140
Query: 149 tgtgaaacagagggagta 166
|||||||| |||||||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 102/126 (80%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 42 tagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtctaga 101
||||||| |||||| |||| |||||||||||||||||| | ||||| |||||| |
Sbjct: 127 tagtattgcccacattcatatagatgttaatgaatctagaca--tatatgcgtgtctaaa 70
Query: 102 ttcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagg 161
|||||| ||||| |||| ||||| | | || || || | ||||||||||||||| ||||
Sbjct: 69 ttcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggagg 10
Query: 162 gagtac 167
||||||
Sbjct: 9 gagtac 4
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 33 aagtcagtttagtattttccacatatatattgatgttaatgaatctagatagatatat 90
|||||| | ||| |||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 33 aagtcagtttagtattttccacatatatattgatgttaatgaatctagat 82
|||||| | ||| |||| |||||| ||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 97 ctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaac 156
||||||||||| ||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 157 agagggagta 166
|||| ||||
Sbjct: 134 ggaggaagta 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| ||||| |||| |||||| ||||||||| ||||
Sbjct: 141 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaat 82
Query: 73 gaatctag 80
||||||||
Sbjct: 81 gaatctag 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 138 atgacttacattgtgaaacagagggagta 166
||||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||||| ||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/59 (88%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatga 74
||||||||||| ||| |||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
|||||| | |||||||||||||| ||||||||||
Sbjct: 96 taaaataaattacattgtgaaacggagggagtac 129
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| | |||||||| ||||||||||| || ||||||||| ||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 158 gaggga 163
||||||
Sbjct: 13 gaggga 8
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
|||||||||||| |||||||||| |||| |||||
Sbjct: 105 taaaatgacttatattgtgaaacggaggaagtac 138
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||||| ||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| ||||||||||| | ||| |||| || |||||||||||||||||||| |||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 161 ggagta 166
| ||||
Sbjct: 126 gaagta 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/64 (85%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| ||||| ||| | |||||||||||||||
Sbjct: 129 cttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaat 70
Query: 73 gaat 76
||||
Sbjct: 69 gaat 66
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | || ||||||||||| ||||||||||||||
Sbjct: 137 cttcctccgtttcataatataagtcattctaacattttccacattcatattgatgttaat 78
Query: 73 gaatctaga 81
|||||||||
Sbjct: 77 gaatctaga 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 90 tatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacatt 149
|||||||||||||||||| |||||||||| || || |||| ||| ||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 150 gtgaaacagagggagta 166
|||||| |||| ||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatcta 79
|||||||| | ||| ||||||||||| |||||||||||||||||||||
Sbjct: 120 ataagtcattctagcattttccacattcatattgatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 122/151 (80%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| |||| |||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Query: 76 tctagatagatatatatatgtctagattcattgacatcaatatagatatgagaaatatta 135
| || | | ||||||| || |||||||||| |||| |||| |||| |||| |||
Sbjct: 93 tttaaaca--tatatatgcgtatagattcattagcatctatatgaatatagaaaatgtta 36
Query: 136 aaatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 110 catcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||| || |||||||| || |||||||||||| |||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| ||||||||||||||| |
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgta 69
Query: 76 tctagata 83
||||||||
Sbjct: 70 tctagata 77
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
||||||| |||| |||||||||| || || |||| || |||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||||| ||||| |||| || || ||||| || ||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 95 aatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 86/104 (82%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 64 gatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagata 123
|||||||||||||||||| | ||| ||| ||| |||||||||| || || |||| |||
Sbjct: 105 gatgttaatgaatctagaca--tatgtatgtgtttagattcattaacgtctatatgtata 48
Query: 124 tgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
|||| ||| || || | ||||||||||||||| ||||||||||
Sbjct: 47 tgagcaatgctagaaagtcttacattgtgaaacggagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
||||||||||||||||| ||||| | || ||||| | ||| ||||| | |||||||||
Sbjct: 83 atatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattg 142
Query: 151 tgaaacagagggagta 166
|||||| |||| ||||
Sbjct: 143 tgaaacggaggaagta 158
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| |||||||||| ||||||||||||||| ||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaa 75
Query: 76 tctagatagata 87
|||| |||||||
Sbjct: 74 tctatatagata 63
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtacg 168
|||||||||||||||||||||| |||||||||||
Sbjct: 37 taaaatgacttacattgtgaaatggagggagtacg 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 110 aatgacttacattgtgaaacggagggagta 139
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 98 tagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaaca 157
|||||||| | ||||| |||| ||||||||||| || ||||||||||||| ||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 88 tatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttaca 147
|||||||||||||||||| | ||||| | | || ||| |||| || |||||||||||
Sbjct: 80 tatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgacttaca 139
Query: 148 ttgtgaaacagagggagta 166
|| ||||||||||||||||
Sbjct: 140 ttatgaaacagagggagta 158
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/60 (88%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||||| | |||| ||||||||||||||||| ||||| ||||
Sbjct: 29 atatagatgttaatgaatctagacacatat--atatgtctagattcatttacatctatat 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| ||||| |||||||||||| | ||||||| |||||||||||||| ||||| ||||
Sbjct: 86 atatagatgtaaatgaatctagaca--tatatatgtgtctagattcattaacatctatat 29
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/99 (82%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 67 gttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatatga 126
|||| |||||||| |||||||||||| ||||||||||| | || || |||| || ||
Sbjct: 61 gttagtgaatctatatagatatatat--gtctagattcactaacctccatatgaatgtgg 118
Query: 127 gaaatattaaaatgacttacattgtgaaacagagggagt 165
||||| || ||||||||||||| |||||| ||||||||
Sbjct: 119 gaaatgctagaatgacttacattatgaaacggagggagt 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtacg 168
|||||||||||||||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtacg 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 85 aatgacttacattgtgaaacggaggaagta 114
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 111 atcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||| || || ||||| || |||||||||||||||||||| |||||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaa--taagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| || ||||||| | ||| |||| |||||| ||||||||| ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaa 69
Query: 76 tctagatagatat 88
| |||||| ||||
Sbjct: 70 tttagataaatat 82
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| |||||||| |||||
Sbjct: 113 cttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaat 54
Query: 73 gaatctagata 83
|||||||||||
Sbjct: 53 gaatctagata 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 91 atatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattg 150
|||| |||||||||||| | |||||||| || || ||||| || |||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 151 tgaaacagagggagta 166
|||||| |||| ||||
Sbjct: 100 tgaaacggaggaagta 115
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||| |||||||||||||| |||||||||
Sbjct: 66 aatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| ||||||||| || ||| |||| || ||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 15 cggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 134 taaaatgacttacattgtgaaacagagggagta 166
|||||||| |||||||||||||| |||||||||
Sbjct: 114 taaaatgatttacattgtgaaacggagggagta 146
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 18 cctccgtttcagaa--taagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| || ||| ||| ||||| |||||| |||| |||||||||| |||||||
Sbjct: 141 cctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaa 82
Query: 76 tctagat 82
| |||||
Sbjct: 81 tttagat 75
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||||||||| || | ||||| || ||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 156 cagagggagta 166
| |||||||||
Sbjct: 113 cggagggagta 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagata 83
|||||||||||||||||||||||||
Sbjct: 75 atattgatgttaatgaatctagata 51
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 87 aatgacttacattgtgaaacggagggagtac 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 97 aatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| ||||| |||| ||||||| ||| ||||||| ||||||||||||||| |||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 161 ggagtac 167
| |||||
Sbjct: 132 gaagtac 138
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
|||||||| ||||||||| || || ||||| || |||||||||||||||||||| ||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 160 gggagta 166
|||||||
Sbjct: 11 gggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 100 gattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacaga 159
|||||||| ||||||||| || || ||||| || ||||||||||||| |||||| ||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 160 gggagta 166
|||||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 51 ccacatatatattgatgttaatgaatctagatagatatatata 93
|||||||||||| |||||||||||||||| | | |||||||||
Sbjct: 94 ccacatatatatagatgttaatgaatctaaacacatatatata 52
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| |||||||||| ||| ||| |||| || |||||||||||||||||||| |||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 161 ggagtac 167
| |||||
Sbjct: 10 gaagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagaggg 162
|||||||||||||||||||| |||||
Sbjct: 83 aatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 65 aatgacttacattgtgaaacggagggagtac 95
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| ||||| |||| ||||||| ||| ||||||| ||||||||||||||| |||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 161 ggagtac 167
| |||||
Sbjct: 10 gaagtac 4
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatata 89
|||||||| ||||||||||||||||||||||
Sbjct: 19 atattgatattaatgaatctagatagatata 49
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 54.0 bits (27), Expect = 7e-07
Identities = 98/121 (80%), Gaps = 8/121 (6%)
Strand = Plus / Minus
Query: 47 ttttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattcat 106
|||||||||| |||||||||||||||| | ||||||| ||| ||||||||||||
Sbjct: 116 ttttccacattcatattgatgttaatgagtttagatag--atacatatgtctagat---- 63
Query: 107 tgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||||| || || |||| || |||||||||||||||||||| |||| ||||
Sbjct: 62 --acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Query: 167 c 167
|
Sbjct: 4 c 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 123 aatgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| ||| |||||| || |||||||| || |||||||||||||||||||| |||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 161 ggagtac 167
| |||||
Sbjct: 10 gaagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 101 aatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/42 (92%), Gaps = 2/42 (4%)
Strand = Plus / Minus
Query: 66 tgttaatgaatctagatagatatatatatgtctagattcatt 107
||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 73 tgttaatgaatctagat--atatatagatgtctagattcatt 34
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
||||||||||| |||| | ||||||||||||||| | || ||||||| ||||||||||
Sbjct: 10 attttccacattcatataggtgttaatgaatctag--acatctatatatatctagattca 67
Query: 106 tt 107
||
Sbjct: 68 tt 69
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 104 cattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagaggga 163
|||| |||| |||||| || |||||||| || |||||||||||||||||||| |||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 164 gta 166
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/54 (88%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 65 atgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||| |||||||| || ||||||||||| ||||| ||||
Sbjct: 35 atgttaatgaatctagat--atatatatgtgcctagattcattaacatctatat 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/54 (87%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacat 112
|||| ||||||||||||||||| | ||||||||| |||||||||||| ||||
Sbjct: 86 atatagatgttaatgaatctaggcacatatatata--tctagattcattaacat 35
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 101 aatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 124 tgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||| ||| ||||||||||||| |||||| |||||||||
Sbjct: 47 tgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||||||||| ||||| ||||||||| |||||
Sbjct: 106 cttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 111 atcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||| || ||| ||||| || |||||||| ||||||||||| |||| ||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 93 atgtctagattcattgacatcaatat 118
||||||||||||||||||||||||||
Sbjct: 44 atgtctagattcattgacatcaatat 19
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 94 tgtctagattcattgacatcaatat 118
|||||||||||||||||||||||||
Sbjct: 46 tgtctagattcattgacatcaatat 70
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatctagatag 84
|||||||| | ||| ||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 25 ataagtcattctagcattttccacattcatactgatgctaatgaatctagatag 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 107 tgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||||||| || || ||||| || ||||||||||||| |||||| |||||||||
Sbjct: 79 tgacatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 atatatatgtctagattcattgacat 112
||||||||||||||||||||||||||
Sbjct: 84 atatatatgtctagattcattgacat 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/54 (87%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 65 atgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||| | ||||||| ||| |||||||||||||||| ||||
Sbjct: 59 atgtcaatgaatctagaca--tatatatgtgtttagattcattgacatctatat 110
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 109 acatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
||||||||| | |||||| |||| || ||||| |||||||||||||| |||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 18 cctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaatgaa 75
||||||||||| ||| |||||| | ||| ||||||||||| ||||||||| ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacatttatattgatattaataaa 69
Query: 76 tctagatagatat 88
| |||||| ||||
Sbjct: 70 tttagataaatat 82
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 102 aatgacttacattgtgaaacggagggagta 131
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 101 attcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagag 160
||||||| |||||||||| ||||| |||| || |||||||||||||||||||| |||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 161 ggagta 166
| ||||
Sbjct: 10 gaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/64 (85%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||||||| || ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaat 66
Query: 73 gaat 76
||||
Sbjct: 67 gaat 70
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaata--agtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| |||| ||||| | ||| || | |||||| ||||||||||||||
Sbjct: 130 cttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaat 71
Query: 73 gaatcta 79
|||||||
Sbjct: 70 gaatcta 64
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 101/125 (80%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 42 tagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtctaga 101
||||||| |||| || |||| |||||||||||||||| ||| ||| |||| |||||||
Sbjct: 127 tagtattgcccacgtacatatggatgttaatgaatctaaatacatacatat--gtctaga 70
Query: 102 ttcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagg 161
|||||| ||||| | || ||||| | ||| || || | ||||||||||||||| ||||
Sbjct: 69 ttcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacggagg 10
Query: 162 gagta 166
||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 134 taaaatgacttacattgtgaaacagagggagtac 167
||||||||||||||||||||||| |||| |||||
Sbjct: 37 taaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 109 acatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||||| || |||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 139 tgacttacattgtgaaacagagggagta 166
|||||||||||||||||| |||||||||
Sbjct: 84 tgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 120 aatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 87 atatatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttac 146
||||||||||||||||||||| ||||| |||| || || | ||| || ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 147 attgtgaaa 155
||| |||||
Sbjct: 113 attatgaaa 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 89 atatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgactta 145
||||||||||||||||||| ||||||||| || |||||||| || |||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 142 cttacattgtgaaacagagggagta 166
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 90 tatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacatt 149
|||||||||||||||||| ||| |||| ||| ||||||| || ||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 150 gtgaaacagagggagta 166
||||||| |||| ||||
Sbjct: 123 gtgaaacggaggaagta 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 128 aaatattaaaatgacttacattgtgaaacagagggagta 166
||||| || |||||||||||||||||||| |||| ||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 94 tgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtga 153
|||||||||| || |||||||||| || || ||||| || |||||||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 154 aacagagggagta 166
||| |||| ||||
Sbjct: 132 aacggaggaagta 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||| ||||||||||||||| ||||||||||
Sbjct: 34 aatggcttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/69 (84%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||| ||
Sbjct: 142 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcat 83
Query: 73 gaatctaga 81
||||||||
Sbjct: 82 aaatctaga 74
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/80 (83%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 40 tttagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtcta 99
||||| ||| ||||||| ||| | ||| ||||||||||||||| |||| ||| | ||||
Sbjct: 127 tttagcattgtccacatttatttagatattaatgaatctagat--atatgtatgtttcta 70
Query: 100 gattcattgacatcaatata 119
|||||||| ||||| |||||
Sbjct: 69 gattcattaacatctatata 50
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/51 (88%), Gaps = 2/51 (3%)
Strand = Plus / Plus
Query: 57 atatattgatgttaatgaatctagatagatatatatatgtctagattcatt 107
|||||| |||||||||||||||||| | ||| ||||| ||||||||||||
Sbjct: 49 atatatagatgttaatgaatctagaaacatacatata--tctagattcatt 97
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 31 ataagtcagtttagtattttccacatatatattgatgttaatgaatcta 79
|||||||| | ||| |||| |||||| |||||||||||||||||||||
Sbjct: 120 ataagtcattctagcatttcccacattcatattgatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/80 (83%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| ||||| | ||| |||||||| || ||||| ||||||||
Sbjct: 132 cttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaat 73
Query: 73 gaatctagatagatatatat 92
|||||||||| ||||||||
Sbjct: 72 gaatctagatgaatatatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| |||| ||||| ||||| |||| || || ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 156 cagagggagtac 167
| |||| |||||
Sbjct: 124 cggaggaagtac 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 99 agattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacag 158
||||||||| ||||||||| || || ||||| || |||||||||||||||||||| |
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 159 agggagta 166
||| ||||
Sbjct: 12 aggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaa--taagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| || ||||||| | ||| |||| |||||| ||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaat 66
Query: 73 gaatct 78
||||||
Sbjct: 67 gaatct 72
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| ||| ||||| || || ||||| || ||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 156 cagagggagtac 167
| ||||||||||
Sbjct: 122 cggagggagtac 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 115 atatagatatgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||| || ||||| || ||||||||||||| |||||| |||||||||
Sbjct: 77 atatagatgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 95 gtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaa 154
||||||||||||| ||||| |||| || || | ||| || ||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 155 acagagggagta 166
||||||||||||
Sbjct: 121 acagagggagta 132
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 84/103 (81%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 65 atgttaatgaatctagatagatatatatatgtctagattcattgacatcaatatagatat 124
||||||||||||||||| | | |||||| || |||||||||||| ||| |||| || |
Sbjct: 59 atgttaatgaatctagacacacatatat--gtttagattcattgatatctatatgaatgt 116
Query: 125 gagaaatattaaaatgacttacattgtgaaacagagggagtac 167
| | ||| ||||| | |||||||| |||||| ||||||||||
Sbjct: 117 gggcaatgctaaaaagtcttacattatgaaaccgagggagtac 159
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 103 tcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaacagaggg 162
||||| ||||||||||| || |||||||| || ||||||||| ||||| |||| ||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 163 agta 166
||||
Sbjct: 90 agta 93
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| ||| ||||| || || ||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 156 cagagggagtac 167
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 103 aatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||| |||||||||||||||| ||| |||| | | ||| |||||||||| ||||| ||||
Sbjct: 53 atatagatgttaatgaatctatatatatatgtgtgtgtatagattcattaacatctatat 112
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 124 tgagaaatattaaaatgacttacattgtgaaacagagggagtac 167
|||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 47 tgagaaatgctagaatgagttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/63 (85%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 cttcctccgtttcagaat--aagtcagtttagtattttccacatatatattgatgttaat 72
|||||||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 73 gaa 75
|||
Sbjct: 67 gaa 69
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 54/64 (84%), Gaps = 4/64 (6%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagata----gatatatatatgtctagattcattgacatca 114
|||| |||||||||||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 25 atatggatgttaatgaatctagatatatggatattaatgtgtctagattcattaacatcc 84
Query: 115 atat 118
||||
Sbjct: 85 atat 88
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 96 tctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtgaaa 155
|||||||||||| ||||| |||| ||||||| ||| || || |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 156 cagagggagta 166
|||||| ||||
Sbjct: 15 cagaggaagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 atatatatatgtctagattcatt 107
|||||||||||||||||||||||
Sbjct: 57 atatatatatgtctagattcatt 79
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 87 atatatatgtctagattcattgacatc 113
||||||||||||||||||||| |||||
Sbjct: 84 atatatatgtctagattcattaacatc 58
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/58 (86%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 50 tccacatatatattgatgttaatgaatctagatagatatatatatgtctagattcatt 107
|||| ||| |||| |||||||||||||||| || ||||| | |||||||||||||||
Sbjct: 119 tccatatacatatagatgttaatgaatctaaat--atatacacatgtctagattcatt 64
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttacattgtgaaacagagggagtac 167
||||||||||||||| ||||||||||
Sbjct: 134 cttacattgtgaaacggagggagtac 159
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagtac 167
|||||||||||||||||||| |||| |||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 124 tgagaaatattaaaatgacttacattgtgaaacagagggagta 166
|||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 84 tgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 128 aaatattaaaatgacttacattgtgaaacagagggagta 166
||||| || ||||||||||||| |||||| |||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/50 (88%), Gaps = 2/50 (4%)
Strand = Plus / Minus
Query: 64 gatgttaatgaatctagatagatatatatatgtctagattcattgacatc 113
||||||||||||||||| | |||||||| ||| |||||||||| |||||
Sbjct: 105 gatgttaatgaatctag--acatatatatgtgtttagattcattaacatc 58
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 atatatatgtctagattcattgacatc 113
||||||||||||||||||||| |||||
Sbjct: 79 atatatatgtctagattcattaacatc 105
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 tatgtctagattcattgacatcaatatagatatg 125
|||||||||||||||| ||||| ||||| |||||
Sbjct: 63 tatgtctagattcattaacatctatataaatatg 96
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 90 tatatgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacatt 149
|||||||||||||||||| ||||| |||| || || | ||| || || ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 150 gtgaaacagagggagtac 167
|||||| |||| |||||
Sbjct: 21 atgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 141 acttacattgtgaaacagagggagta 166
|||||||||||||||| |||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 acttacattgtgaaacagagggagta 166
|||||||||||||||| |||||||||
Sbjct: 100 acttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcatt 107
|||| |||||||||||| ||| || | |||||||||||||||||||||
Sbjct: 53 atatagatgttaatgaaccta--tacacatatatatgtctagattcatt 99
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttacattgtgaaacagagggagtac 167
||||||||||||||| ||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctag 80
||||||||||||||||||||||
Sbjct: 53 atattgatgttaatgaatctag 74
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttacattgtgaaacagagggagtac 167
|||||||| |||||||||||||||||
Sbjct: 108 cttacattatgaaacagagggagtac 133
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 93 atgtctagattcattgacatcaatatagatatgagaaatattaaaatgacttacattgtg 152
||||||||||||||| |||| |||| || || | ||| ||| || | |||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 153 aaacagagggagta 166
|||| |||||||||
Sbjct: 145 aaacggagggagta 158
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 atatatatgtctagattcattgacat 112
||||||||||||||||||||| ||||
Sbjct: 50 atatatatgtctagattcattaacat 25
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 141 acttacattgtgaaacagagggagta 166
|||||||||||||||| |||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 acttacattgtgaaacagagggagta 166
|||||||||||||||| |||||||||
Sbjct: 100 acttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 101 aatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 89 atatatgtctagattcattgacatcaatat 118
||||||||||||||||||| ||||| ||||
Sbjct: 82 atatatgtctagattcattaacatctatat 53
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 51 ccacatatatattgatgttaatgaatctag 80
||||||| |||| |||||||||||||||||
Sbjct: 107 ccacatacatatagatgttaatgaatctag 78
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 atatatatgtctagattcattgacat 112
||||||||||||||||||||| ||||
Sbjct: 53 atatatatgtctagattcattaacat 78
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 141 acttacattgtgaaacagagggagta 166
|||||||||||||||| |||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 aatgacttacattgtgaaacagagggagta 166
|||||||||||||||||||| |||| ||||
Sbjct: 102 aatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttacattgtgaaacagagggagtac 167
||||||||||||||| ||||||||||
Sbjct: 134 cttacattgtgaaacggagggagtac 159
