miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00819;mir-246;AAGD02004290.1/17657-17764 31234:Caenorhabditis
remanei
Length = 108
Score = 190 bits (96), Expect = 2e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 agtccaaacaatagaacagcacctggccgatttcatgtaatatctgaaaagaaaagatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agtccaaacaatagaacagcacctggccgatttcatgtaatatctgaaaagaaaagatat 64
Query: 61 tacatgtatcgggtaggagctgtttgagtaaaggat 96
||||||||||||||||||||||||||||||||||||
Sbjct: 65 tacatgtatcgggtaggagctgtttgagtaaaggat 100
>RF00819;mir-246;Z69385.1/30335-30444 6239:Caenorhabditis elegans
Length = 110
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 gatattacatgtatcgggtaggagctgtt 84
|||||||||||| ||||||||||||||||
Sbjct: 62 gatattacatgtttcgggtaggagctgtt 90
>RF00819;mir-246;CAAC02000470.1/1130830-1130722
6238:Caenorhabditis briggsae
Length = 109
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 tattacatgtatcgggtaggagctgtt 84
|||||||||||| ||||||||||||||
Sbjct: 63 tattacatgtattgggtaggagctgtt 89
