miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00820;mir-248;AAGD02008733.1/82049-82151 31234:Caenorhabditis
remanei
Length = 103
Score = 204 bits (103), Expect = 2e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 8 ttttttggcagagattacgattagcgatatccagccgttgtattcaatagcgcatttgag 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttttggcagagattacgattagcgatatccagccgttgtattcaatagcgcatttgag 60
Query: 68 tacacgtgcacggatacgctcatcgtttttgtattgccacttc 110
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacacgtgcacggatacgctcatcgtttttgtattgccacttc 103
>RF00820;mir-248;U41270.1/20339-20236 6239:Caenorhabditis elegans
Length = 104
Score = 65.9 bits (33), Expect = 1e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 30 agcgatatccagccgttgtattcaatagcgcatttgagtacacgtgcacggat-acgctc 88
|||| |||||||||| ||| ||||||| |||||||| ||||||||||||||| ||||||
Sbjct: 23 agcggtatccagccgatgttttcaatactgcatttgaatacacgtgcacggataacgctc 82
Query: 89 atcgttttt 97
|| ||||||
Sbjct: 83 attgttttt 91
