miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00791;mir-357;AAGD02001646.1/15527-15437 31234:Caenorhabditis
remanei
Length = 91
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 12 ctgcctaacagcggattccagtaactctgagcatatacatgaagtttcaaaacaatgtaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcctaacagcggattccagtaactctgagcatatacatgaagtttcaaaacaatgtaa 60
Query: 72 atgccagtcgttgctggaattcgataagcac 102
|||||||||||||||||||||||||||||||
Sbjct: 61 atgccagtcgttgctggaattcgataagcac 91
>RF00791;mir-357;ABEG01006163.1/1657-1549 135651:Caenorhabditis
brenneri
Length = 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aatgtaaatgccagtcgttgctggaattcg 94
||||||||||||||||||||| ||||||||
Sbjct: 60 aatgtaaatgccagtcgttgcaggaattcg 89
>RF00791;mir-357;ABEG01002539.1/24698-24590 135651:Caenorhabditis
brenneri
Length = 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aatgtaaatgccagtcgttgctggaattcg 94
||||||||||||||||||||| ||||||||
Sbjct: 60 aatgtaaatgccagtcgttgcaggaattcg 89
>RF00791;mir-357;AF016431.1/1453-1344 6239:Caenorhabditis elegans
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 65 aatgtaaatgccagtcgttgctggaattcg 94
||||||||||||||||||||| ||| ||||
Sbjct: 61 aatgtaaatgccagtcgttgcaggagttcg 90
