miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00249;mir-46;ABKE01004910.1/3903-3980 54126:Pristionchus
pacificus
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 20 gaccgaagagagccttctgttgacagtgcgggccgttggtgctaatgctattgtcatgga 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaccgaagagagccttctgttgacagtgcgggccgttggtgctaatgctattgtcatgga 60
Query: 80 gtcgctctcttcaggctt 97
||||||||||||||||||
Sbjct: 61 gtcgctctcttcaggctt 78
>RF00249;mir-46;ABLE02008754.1/1796-1721 281687:Caenorhabditis
japonica
Length = 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgtcatggagtcgctctcttcag 93
|||||||||||||||||||||||
Sbjct: 50 tgtcatggagtcgctctcttcag 72
>RF00249;mir-46;Z82094.1/4737-4814 6239:Caenorhabditis elegans
Length = 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgtcatggagtcgctctcttcag 93
|||||||||||||||||||||||
Sbjct: 52 tgtcatggagtcgctctcttcag 74
>RF00249;mir-46;ABEG01013767.1/31821-31746 135651:Caenorhabditis
brenneri
Length = 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgtcatggagtcgctctcttcag 93
|||||||||||||||||||||||
Sbjct: 50 tgtcatggagtcgctctcttcag 72
