miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 77.8 bits (39), Expect = 1e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatta-atacatcaatatgaatgtggaaaatgct 65
|||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||
Sbjct: 95 gtcattctagcatttcccacattcatattagattcatcaatatgaatatgggaaatgct 37
Score = 61.9 bits (31), Expect = 8e-10
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaatacatc-aatatgaatgtggaaaatgct 65
||||||||||||||||||| ||||||||| || ||| ||||||||||||| |||||||
Sbjct: 29 gtcattctagcatttcccatattcatattgatgaatctaatatgaatgtgggaaatgct 87
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 71.9 bits (36), Expect = 9e-13
Identities = 53/58 (91%), Gaps = 3/58 (5%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||||| || ||||||||||||||| |||||||
Sbjct: 29 gtcattctagcatttcccacattcatattgat---tcaatatgaatgtgggaaatgct 83
Score = 71.9 bits (36), Expect = 9e-13
Identities = 53/58 (91%), Gaps = 3/58 (5%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||||| | |||||||||||||||| |||||||
Sbjct: 91 gtcattctagcatttcccacattcatattga---atcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 3e-12
Identities = 49/53 (92%), Gaps = 3/53 (5%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaa 60
||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 90 gtcattctagcatttcccacattcatattga---atcaatatgaatgtggaaa 41
Score = 56.0 bits (28), Expect = 5e-08
Identities = 52/58 (89%), Gaps = 4/58 (6%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaaatgct 65
||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||
Sbjct: 29 gtcattctagcatttcc-acattcatattgat---tcaatatgaatgtgggaaatgct 82
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatattaat 60
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 83 acatcaatatgaatgtggaaaatgct 108
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 116 gtcattctagcattttccacattcatatt 88
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||||||||||||||||
Sbjct: 108 gtcattctagcatttcccacattcatattaat 77
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatattaat 60
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 108 gtcattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 63.9 bits (32), Expect = 2e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 aatgcaggtcattctagcatttcccacattcatatt 36
|||||| |||||||||||||||||||||||||||||
Sbjct: 22 aatgcaagtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa
Japonica Group
Length = 144
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatattaat 60
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 116 gtcattctagcatttcccacattcatatt 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 83 acatcaatatgaatgtgggaaatgct 108
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 61.9 bits (31), Expect = 8e-10
Identities = 55/63 (87%), Gaps = 5/63 (7%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaat-----acatcaatatgaatgtggaaaat 62
|||||||||||| |||||||||||||||| || ||||||||||||||||||||| |
Sbjct: 99 gtcattctagcacttcccacattcatattgatcattaacatcaatatgaatgtggaaagt 40
Query: 63 gct 65
|||
Sbjct: 39 gct 37
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 60.0 bits (30), Expect = 3e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatta 37
||||||||||||||||||||||||||||||
Sbjct: 106 gtcattctagcatttcccacattcatatta 77
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 attctagcatttcccacattcatat 35
||||||||||||| |||||||||||
Sbjct: 32 attctagcatttctcacattcatat 56
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 60.0 bits (30), Expect = 3e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatta 37
||||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatta 58
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 111 gtcattctagcatttcccacattcatatt 83
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 133 gtcattctagcatttcccacattcatatt 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 100 acatcaatatgaatgtgggaaatgct 125
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 105 gtcattctagcatttcccacattcatatt 77
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 72 acatcaatatgaatgtgggaaatgct 97
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 tcattctagcatttcccacattcatatt 36
||||||||||||||| ||||||||||||
Sbjct: 116 tcattctagcatttctcacattcatatt 89
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 134 gtcattctagcatttcccacattcatatt 106
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 113 gtcattctagcatttcccacattcatatt 85
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 80 acatcaatatgaatgtgggaaatgct 105
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 134 gtcattctagcatttcccacattcatatt 106
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 122 gtcattctagcatttcccacattcatatt 94
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 89 acatcaatatgaatgtgggaaatgct 114
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 111 gtcattctagcatttcccacattcatatt 83
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 78 acatcaatatgaatgtgggaaatgct 103
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 114 gtcattctagcatttcccacattcatatt 86
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaatgtgggaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 82 catcaatatgaatgtgggaaatgct 106
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||| | |||||||||||||||||||
Sbjct: 134 gtcattccaccatttcccacattcatatt 106
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 122 gtcattctagcatttcccacattcatatt 94
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 89 acatcaatatgaatgtgggaaatgct 114
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 134 gtcattctagcatttcccacattcatatt 106
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 101 acatcaatatgaatgtgggaaatgct 126
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| |||||||| |||||||||||||
Sbjct: 29 gtcattatagcattttccacattcatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 45 aatatgaatgtggaaaatgct 65
|||||||||||||||||||||
Sbjct: 57 aatatgaatgtggaaaatgct 37
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 112 gtcattctagcatttcccacattcatatt 84
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||||||| |||||
Sbjct: 29 gtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 125 gtcattctagcatttcccacattcatatt 97
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 92 acatcaatatgaatgtgggaaatgct 117
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 3 gtcattctagcatttcccacattcatatt 31
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 121 gtcattctagcatttcccacattcatatt 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 36 acatcaatatgaatgtgggaaatgct 11
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 88 acatcaatatgaatgtgggaaatgct 113
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 120 gtcattctagcatttcccacattcatatt 92
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 cattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||
Sbjct: 31 cattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 87 acatcaatatgaatgtgggaaatgct 112
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 3 gtcattctagcatttcccacattcatatt 31
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 9 tcattctagcatttcccacattcatatt 36
||||||||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatatt 60
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 35 catcaatatgaatgtgggaaatgct 11
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 56 catcaatatgaatgtgggaaatgct 80
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 1e-08
Identities = 53/62 (85%), Gaps = 7/62 (11%)
Strand = Plus / Minus
Query: 11 attctagcatttcccacattcatattaatac-------atcaatatgaatgtggaaaatg 63
|||||||||||| ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 98 attctagcatttnccacattcatattgatacatcatgtatcaatatgaatgtggaaaatg 39
Query: 64 ct 65
||
Sbjct: 38 ct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 attctagcatttcccacattcatattaatacat 43
|||||||||||| ||||||||||||| ||||||
Sbjct: 32 attctagcattttccacattcatattgatacat 64
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 108 gtcattctagcatttcccacattcatatt 80
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 3 gtcattctagcatttctcacattcatatt 31
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgct 100
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||| || |||||
Sbjct: 132 gtcattctagcatttcccacgtttatatt 104
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 112 gtcattctagcatttcccacattcatatt 84
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||||||| |||||
Sbjct: 29 gtcattctagcatttcccacatttatatt 57
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 91 gtcattctagcatttcccacattcatatt 63
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 134 gtcattctagcatttcccacattcatatt 106
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||| |||||||||||
Sbjct: 62 acatcaatatgaatatggaaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 101 acatcaatatgaatgtgggaaatgct 126
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||| |||||||||
Sbjct: 29 gtcattctagcattttccatattcatatt 57
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 128 gtcattctagcatttcccacattcatatt 100
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||||||||||||||||
Sbjct: 29 gtcattctatcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 95 acatcaatatgaatgtgggaaatgct 120
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 106 gtcattctagcatttcccacattcatatt 78
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 58 acatcaatatgaatgtggaaaatgct 33
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 73 acatcaatatgaatgtgggaaatgct 98
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| |||||||| |||||||||||||
Sbjct: 25 gtcattatagcattttccacattcatatt 53
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||| |||||||||||
Sbjct: 128 gtcattctagcatttcctacattcatatt 100
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 124 gtcattctagcatttcccacattcatatt 96
Score = 56.0 bits (28), Expect = 5e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||||||| ||||||||
Sbjct: 29 gtcattctagcatttcccacatttatattaat 60
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 91 acatcaatatgaatgtgggaaatgct 116
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| ||||||||||||||||||
Sbjct: 134 gtcattctaatatttcccacattcatatt 106
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 132 gtcattctagcatttcccacattcatatt 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtagaaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 99 acatcaatatgaatgtgggaaatgct 124
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| | |||||||||||
Sbjct: 29 gtcattctagcattttctacattcatatt 57
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 3 gtcattctagcatttcccacattcatatt 31
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||||
Sbjct: 108 gtcattctagcatttcccacattcatatt 80
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 36 acatcaatatgaatgtgggaaatgct 11
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgct 100
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 56.0 bits (28), Expect = 5e-08
Identities = 53/62 (85%), Gaps = 7/62 (11%)
Strand = Plus / Plus
Query: 11 attctagcatttcccacattcatattaatac-------atcaatatgaatgtggaaaatg 63
|||||||||||| ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 32 attctagcattttccacattcatattgatacatgatgtatcaatatgaatgtggaaaatg 91
Query: 64 ct 65
||
Sbjct: 92 ct 93
Score = 56.0 bits (28), Expect = 5e-08
Identities = 53/62 (85%), Gaps = 7/62 (11%)
Strand = Plus / Minus
Query: 11 attctagcatttcccacattcatattaatac-------atcaatatgaatgtggaaaatg 63
|||||||||||| ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 98 attctagcattttccacattcatattgatacatcatgtatcaatatgaatgtggaaaatg 39
Query: 64 ct 65
||
Sbjct: 38 ct 37
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 134 gtcattctagcatttcccacattcatat 107
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatat 56
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 100 gtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 5e-08
Identities = 52/58 (89%), Gaps = 4/58 (6%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaaatgct 65
|||||||||||||||||||||||| |||| |||||||||||||||| | |||||||
Sbjct: 29 gtcattctagcatttcccacattc--atta--acatcaatatgaatgtaggaaatgct 82
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||| |||||||||||
Sbjct: 90 gtcattctagcatttcctacattcatatt 62
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 5e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaat 39
|||||||||||||||| |||||||||||||||
Sbjct: 134 gtcattctagcatttctcacattcatattaat 103
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 38 atacatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||||
Sbjct: 64 atacatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaa 61
||||||||||||||||||||||
Sbjct: 95 acatcaatatgaatgtggaaaa 116
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||| ||| |||||||||||||
Sbjct: 128 gtcattctagccttttccacattcatatt 100
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 134 gtcattctagcatttcccacattcatat 107
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 5e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 1 aatgcaggtcattctagcatttcccacattcatatt 36
|||||| |||||| ||||||||||||||||||||||
Sbjct: 97 aatgcaagtcattttagcatttcccacattcatatt 62
Score = 46.1 bits (23), Expect = 5e-05
Identities = 50/57 (87%), Gaps = 4/57 (7%)
Strand = Plus / Plus
Query: 9 tcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaaatgct 65
||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||
Sbjct: 30 tcattctagcatttctcacattc--atta--gcatcaatatgaatgtgggaaatgct 82
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 5e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaat 39
|||||| |||||||||||||||||||||||||
Sbjct: 134 gtcattttagcatttcccacattcatattaat 103
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||| ||||||||||||||
Sbjct: 29 gtcattatagcattacccacattcatatt 57
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatat 56
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 106 gtcattctagcatttcccacattcatat 79
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcata 55
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||||||||||||||||||||||
Sbjct: 138 gtcattctagcatttcccacattcata 112
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||||||||||||||||||||||
Sbjct: 71 gtcattctagcatttcccacattcata 45
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||||||||||||||||||||||
Sbjct: 121 gtcattctagcatttcccacattcata 95
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| || |||||||||
Sbjct: 29 gtcattctagcatttctcatattcatatt 57
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 38 atacatcaatatgaatgtggaaaatgc 64
|||||||||||||||||||||||||||
Sbjct: 64 atacatcaatatgaatgtggaaaatgc 38
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 110 gtcattttagcatttcccacattcatatt 82
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 77 acatcaatatgaatgtgggaaatgct 102
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacattcata 55
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 atcaatatgaatgtggaaaatg 63
||||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtggaaaatg 124
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| ||||| |||||||||||||
Sbjct: 134 gtcattctaacattttccacattcatatt 106
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 cattctagcatttcccacattcatatt 36
|||||||||||||||||||||||||||
Sbjct: 106 cattctagcatttcccacattcatatt 80
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgct 100
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 125 gtcattctagcatttctcacattcatatt 97
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 52.0 bits (26), Expect = 8e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaatac 41
|||||||||| |||||||||||||||||| ||||
Sbjct: 29 gtcattctagtatttcccacattcatattgatac 62
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||| | |||||||||||||||||||
Sbjct: 131 gtcattccaccatttcccacattcatatt 103
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 101 acatcaatatgaatgtggaaaatgct 126
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 134 gtcattctagcattttccacattcatatt 106
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||| |||||||||||||||
Sbjct: 108 gtcattctagcatatcccacattcatatt 80
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 71 acatcaatatgaatgtggaaaatgct 96
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| |||||||| |||||||||||||
Sbjct: 29 gtcattttagcattttccacattcatatt 57
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 attctagcatttcccacattcatatt 36
|||||||||||| |||||||||||||
Sbjct: 32 attctagcattttccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||| |||||||||||
Sbjct: 74 acatcaatatgaatatggaaaatgct 99
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||| |||||||||
Sbjct: 107 gtcattctagcattttccatattcatatt 79
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||||||||||||||||
Sbjct: 111 gtcattctaacatttcccacattcatatt 83
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 8e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgct 37
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 8e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaatac 41
|||||||||||||||| |||||||||||| ||||
Sbjct: 29 gtcattctagcatttctcacattcatattgatac 62
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| ||||| |||||||||||||
Sbjct: 134 gtcattctaacatttaccacattcatatt 106
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 8e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatta 37
|||||| |||||||||||||||||||||||
Sbjct: 29 gtcattttagcatttcccacattcatatta 58
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaat 39
|||||||||||||| ||||||||||||||||
Sbjct: 134 gtcattctagcattctccacattcatattaat 103
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 114 gtcattctagcatttctcacattcatatt 86
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 115 gtcattctagcatttcccatattcatatt 87
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||| |||||| |||||
Sbjct: 29 gtcattctagcatttcccatattcatgttaat 60
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
|||||||||||||||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgct 107
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| |||||||| |||||||||||||
Sbjct: 115 gtcattttagcattttccacattcatatt 87
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 113 gtcattctagcatttcccatattcatatt 85
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||| |||||||||||
Sbjct: 99 gtcattctagcatttcctacattcatatt 71
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 114 gtcattgtagcatttcccacattcatatt 86
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcata 34
||||||||||||||| |||||||||||
Sbjct: 29 gtcattctagcattttccacattcata 55
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgct 106
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||| |||||||||||||||||||
Sbjct: 61 catcagtatgaatgtggaaaatgct 37
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||||||||||||||||
Sbjct: 29 gtcattctatcatttcccacattcatatt 57
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
|||||||||||||||| |||||||||||
Sbjct: 134 gtcattctagcatttctcacattcatat 107
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 29 gtcattttagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 tagcatttcccacattcatatt 36
||||||||||||||||||||||
Sbjct: 111 tagcatttcccacattcatatt 90
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaatgtgggaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 86 catcaatatgaatgtgggaaatgct 110
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 8 gtcattctagcatttctcacattcatatt 36
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 101 gtcattctagcatttctcacattcatatt 73
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 111 gtcattctagcatttctcacattcatatt 83
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||| |||||||||||
Sbjct: 102 gtcattctagcatttccaacattcatatt 74
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
|||||||||||||||||||| |||||||
Sbjct: 29 gtcattctagcatttcccacgttcatat 56
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||| ||||||||
Sbjct: 29 gtcattctagcatttcccacgttcatatt 57
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 29 gtcattttagcatttcccacattcatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaatgtgggaaatgct 37
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 134 gtcattctagcatttctcacattcatatt 106
Score = 44.1 bits (22), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||| || ||||||||||||
Sbjct: 29 gtcattctagcatntctcacattcatatt 57
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||||||| |||||
Sbjct: 29 gtcattctagcatttcccacatttatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||||||||||||
Sbjct: 134 gtcattctagcatttttcacattcatatt 106
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 119 gtcattttagcatttcccacattcatatt 91
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tagcatttcccacattcatatt 36
||||||||||||||||||||||
Sbjct: 37 tagcatttcccacattcatatt 58
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 62 catcaatatgaatgtgggaaatgct 38
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||||| |||||||
Sbjct: 87 catcaatatgaatgtgggaaatgct 111
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||||||||||||||||
Sbjct: 29 gtcattctaacatttcccacattcatatt 57
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||||||||||||||||
Sbjct: 29 gtcattctaacatttcccacattcatatt 57
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 29 gtcattctagcatttcccatattcatatt 57
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaat 39
||||||||||||||||||| |||||| |||||
Sbjct: 115 gtcattctagcatttcccatattcatgttaat 84
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattca 32
|||||||||||||||||||||||||
Sbjct: 111 gtcattctagcatttcccacattca 87
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattca 32
|||||||||||||||| ||||||||
Sbjct: 29 gtcattctagcatttcacacattca 53
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 106 gtcattctagcatttctcacattcatatt 78
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||| ||||| ||||||||||||
Sbjct: 29 gtcattctagtatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 29 gtcattttagcatttcccacattcatatt 57
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacatt 30
|||||||||||||||||||||||
Sbjct: 97 gtcattctagcatttcccacatt 75
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 37 aatacatcaatatgaatgtggaaaatgct 65
|||||||||||||||||||| |||||||
Sbjct: 65 aatacatcaatatgaatgtgagaaatgct 37
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 29 gtcattctagcatttcccatattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 116 gtcattctagcatttcccatattcatatt 88
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| ||||||||||||||||||||||
Sbjct: 29 gtcattgtagcatttcccacattcatatt 57
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 29 gtcattctagcatttcccatattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||||||||||||||||
Sbjct: 112 gtcattctaacatttcccacattcatatt 84
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcatttctcacattcatatt 57
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||||| |||||||||
Sbjct: 118 gtcattctagcatttcccatattcatatt 90
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||| ||||||||||||||||||
Sbjct: 134 gtcattctagtatttcccacattcatatt 106
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||||| ||||||||||||||
Sbjct: 62 acatcaatatggatgtggaaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||| ||||||
Sbjct: 29 gtcattctagcattttccacatccatatt 57
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| ||||||||||||
Sbjct: 103 gtcattctagcatttctcacattcatatt 75
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatat 56
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 38 atacatcaatatgaatgtggaaaatgct 65
|||||||||||||||| |||||||||||
Sbjct: 93 atacatcaatatgaatatggaaaatgct 120
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||| ||||||||||||||||||||
Sbjct: 62 acatcgatatgaatgtggaaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||| |||||||||
Sbjct: 128 gtcattctagcattttccatattcatatt 100
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 48.1 bits (24), Expect = 1e-05
Identities = 48/55 (87%), Gaps = 2/55 (3%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaatacatcaatatgaatgtggaaaat 62
|||||||||| |||| |||||||||||| | |||||||||||||||| |||||
Sbjct: 92 gtcattctagtatttttcacattcatattga--catcaatatgaatgtgaaaaat 40
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||| ||||||||||||
Sbjct: 134 gtcattctagcattttccacattcatat 107
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
|||| ||||||||||||||||||||
Sbjct: 102 catctatatgaatgtggaaaatgct 126
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatg 63
||||||||||||||||||||||||
Sbjct: 73 acatcaatatgaatgtggaaaatg 96
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatat 56
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
|||| ||||||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgct 37
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||| ||||||||||||||||||
Sbjct: 29 gtcattctaacatttcccacattcatat 56
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||| ||||||||||||
Sbjct: 134 gtcattctagcattttccacattcatat 107
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
|||||||||||||||||| |||||||||
Sbjct: 29 gtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||| ||||||||||||
Sbjct: 29 gtcattctagcattttccacattcatat 56
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
|||| ||||||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgct 37
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatattaat 39
|||||||||||||||| |||||| ||||||||
Sbjct: 29 gtcattctagcatttctcacatttatattaat 60
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 1e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 aatgcaggtcattctagcatttcccacattcatatt 36
|||||| |||||| |||||||||||| |||||||||
Sbjct: 119 aatgcaagtcattttagcatttcccatattcatatt 84
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||| ||||
Sbjct: 29 gtcattctagcatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatat 35
||||||||||||||||||||||| ||||
Sbjct: 82 gtcattctagcatttcccacatttatat 55
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacatt 30
|||||||||||||||||||||||
Sbjct: 125 gtcattctagcatttcccacatt 103
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 39 tacatcaatatgaatgtggaaaat 62
||||||||||||||||||||||||
Sbjct: 63 tacatcaatatgaatgtggaaaat 40
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaat 62
|||||||||||||||||||||||
Sbjct: 73 acatcaatatgaatgtggaaaat 95
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatat 35
|||||||||||||| |||||||||||||
Sbjct: 29 gtcattctagcattgcccacattcatat 56
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatg 63
||||||||||||||||||||||||
Sbjct: 82 acatcaatatgaatgtggaaaatg 105
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| ||||| |||||||||||||
Sbjct: 115 gtcattctaacattttccacattcatatt 87
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||| ||||||||||||||||||
Sbjct: 29 gtcattctggcatttcccacattcata 55
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 ctagcatttcccacattcatatt 36
|||||||||||||||||||||||
Sbjct: 88 ctagcatttcccacattcatatt 66
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||||||| |||||||
Sbjct: 61 acatcaatatgaatgtgggaaatgct 86
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 cattctagcatttcccacattcatatt 36
|||||||| ||||||||||||||||||
Sbjct: 132 cattctagtatttcccacattcatatt 106
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatattaa 38
|||||| ||| ||||||||||||||||||||
Sbjct: 85 gtcattttagtatttcccacattcatattaa 55
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaat 62
|||||||||||||||||||||||
Sbjct: 100 acatcaatatgaatgtggaaaat 122
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 39 tacatcaatatgaatgtggaaaatgct 65
||||||||||||||| |||||||||||
Sbjct: 71 tacatcaatatgaatatggaaaatgct 97
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||| |||||||||||
Sbjct: 62 acatcaatatgaatatggaaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||| |||||||||
Sbjct: 29 gtcattctagcattttccatattcatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||| |||||||||
Sbjct: 105 gtcattctagcattttccatattcatatt 77
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcata 34
|||||||||| ||||||||||||||||
Sbjct: 120 gtcattctagtatttcccacattcata 94
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaat 62
|||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaat 40
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacat 29
||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacat 50
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 acatcaatatgaatgtggaaaatgct 65
|||||||||||||| |||||||||||
Sbjct: 88 acatcaatatgaatatggaaaatgct 113
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| |||||| |||||
Sbjct: 29 gtcattctagcatttctcacatttatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||| |||||||||
Sbjct: 121 gtcattctagcattttccatattcatatt 93
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacat 29
||||||||||||||||||||||
Sbjct: 104 gtcattctagcatttcccacat 83
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcat 33
|||||| |||||||||||||||||||
Sbjct: 29 gtcattttagcatttcccacattcat 54
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 40 acatcaatatgaatgtggaaaatgct 65
||||||||| ||||||||||||||||
Sbjct: 62 acatcaatacgaatgtggaaaatgct 37
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| |||||||| ||||
Sbjct: 29 gtcattctagcattttccacattcgtatt 57
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacat 29
||||||||||||||||||||||
Sbjct: 29 gtcattctagcatttcccacat 50
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 attctagcatttcccacattca 32
||||||||||||||||||||||
Sbjct: 32 attctagcatttcccacattca 53
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cattctagcatttcccacattcatat 35
||||||||||||| ||||||||||||
Sbjct: 1 cattctagcattttccacattcatat 26
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cattctagcatttcccacattcatat 35
||||||| ||||||||||||||||||
Sbjct: 102 cattctaacatttcccacattcatat 77
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 41 catcaatatgaatgtggaaaatgct 65
|||||||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtgaaaaatgct 37
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||| ||||||||||| |||||||||
Sbjct: 29 gtcattcaagcatttcccatattcatatt 57
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||||||| || |||||
Sbjct: 29 gtcattctagcatttcccacgtttatatt 57
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||| ||||||| |||||
Sbjct: 29 gtcattctagcattttccacatttatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| || |||||||||
Sbjct: 102 gtcattctagcatttctcatattcatatt 74
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| || |||||||||||||||||||
Sbjct: 29 gtcattttaccatttcccacattcatatt 57
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||| |||||||||||||||
Sbjct: 96 catcaatataaatgtggaaaatgct 120
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| |||||| ||||||||||||
Sbjct: 29 gtcattctaccatttctcacattcatatt 57
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| || |||||||||||||||||||
Sbjct: 122 gtcattttaccatttcccacattcatatt 94
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||||||||| |||||| |||||
Sbjct: 69 gtcattctagcatttctcacatttatatt 41
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 catcaatatgaatgtggaaaatgct 65
||||||||||||||| |||||||||
Sbjct: 90 catcaatatgaatgtagaaaatgct 114
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||| ||||| ||||||||||||
Sbjct: 29 gtcattctagtatttctcacattcatatt 57
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||| ||||||||||| |||||||||
Sbjct: 132 gtcattcaagcatttcccatattcatatt 104
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||| ||||||||||||||||||
Sbjct: 29 gtcattctattatttcccacattcatatt 57
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||||||| |||||||||||| |||||
Sbjct: 127 gtcattctagtatttcccacatttatatt 99
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| |||||||||||| |||||||||
Sbjct: 125 gtcattttagcatttcccatattcatatt 97
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 gtcattctagcatttcccacattcatatt 36
||||||||||||||||| | |||||||||
Sbjct: 29 gtcattctagcatttcctatattcatatt 57
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 gtcattctagcatttcccacattcatatt 36
|||||| |||||||||||||||| |||||
Sbjct: 134 gtcattttagcatttcccacatttatatt 106
