miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 145/158 (91%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 161 tgctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatg 102
Query: 91 ttgataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaa 149
| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 101 ctaatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaa 42
Query: 150 atgcaagaatgaattacattatgaaacggaggaagtac 187
|||| ||||||| ||| ||| |||||||||||||||||
Sbjct: 41 atgctagaatgacttatattgtgaaacggaggaagtac 4
Score = 109 bits (55), Expect = 2e-23
Identities = 122/143 (85%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| |||||||||||| |||||| ||||||||||||||| | || |||||| |
Sbjct: 16 tttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatctaga 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | ||||||||||||| ||||||||||||||| ||||| ||||||| |
Sbjct: 76 tagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 4e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 94 ataaatctacacatatatatctatctagattcattaaatca-atatgaatgtgagaaatg 152
|| |||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 123 bits (62), Expect = 1e-27
Identities = 126/146 (86%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| |||||| ||||||||||| ||| || |||||| |
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | |||||||||||||| ||||||||||||||| |||||| ||||||| |
Sbjct: 87 tagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgact 28
Query: 164 tacattatgaaacggaggaagtacta 189
|||||| ||||||||||| |||||||
Sbjct: 27 tacattgtgaaacggagggagtacta 2
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 4e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 94 ataaatctacacatatatatctatctagattcatt-aaatcaatatgaatgtgagaaatg 152
|| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 7e-32
Identities = 136/157 (86%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||||||||||||| ||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtacta 189
||||||| ||||||| ||||||||||| |||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtacta 2
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 132/143 (92%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||||||| |||||||||||||||||||||||| || ||| || |
Sbjct: 147 tttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgtaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| |
Sbjct: 87 catatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 27 tacattgtgaaacggagggagta 5
Score = 155 bits (78), Expect = 3e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||| ||||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
||||||| ||||||| ||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 9e-47
Identities = 140/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 143 bits (72), Expect = 1e-33
Identities = 127/144 (88%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| |
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | | |||||||||||| |||||||||||| || |||||| ||||||| |
Sbjct: 87 taaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagtac 187
|||||| ||||||||||| |||||
Sbjct: 27 tacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 180 bits (91), Expect = 5e-45
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| ||||||| ||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
Score = 133 bits (67), Expect = 1e-30
Identities = 125/143 (87%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||| |||||| |||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | |||||||||||||| | ||||||||||||| ||||| | ||||||| |
Sbjct: 76 tagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 176 bits (89), Expect = 8e-44
Identities = 141/157 (89%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatg 61
Query: 91 ttgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaa 149
|| || |||||| |||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 62 ttaatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaa 121
Query: 150 atgcaagaatgaattacattatgaaacggaggaagta 186
||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 122 atgttagaatgacttacattgtgaaacggagggagta 158
Score = 155 bits (78), Expect = 3e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||||||||||||| |||| |||||||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtt 63
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| ||||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaat 123
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| | ||||| ||| ||| ||||||||||||||||
Sbjct: 124 gctaaaatgacttatattgtgaaacggaggaagta 158
Score = 125 bits (63), Expect = 3e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| ||||||||| || ||||||||||||||||||| ||||| || |||||| |
Sbjct: 147 tttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | |||||||||||||| ||||||||||||||| | ||||| | ||||| |
Sbjct: 87 tagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgact 28
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 27 tacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 170 bits (86), Expect = 5e-42
Identities = 139/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||| ||| | ||||||||||||| ||||||||||||||| ||||||
Sbjct: 97 atgaatctaaacatatgtatgt-gctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 151 bits (76), Expect = 5e-36
Identities = 132/147 (89%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta-c 103
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagc 75
Query: 104 acatatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaa 162
||||| ||| | | |||||||||||| ||||||||||||||| ||||||| |||||||
Sbjct: 76 acatacata--tgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgac 133
Query: 163 ttacattatgaaacggaggaagtacta 189
||||||| ||||||||||| |||||||
Sbjct: 134 ttacattgtgaaacggagggagtacta 160
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 8e-41
Identities = 139/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaat 123
Query: 152 gcaagaatgaattacattatgaaacggaggaagtac 187
|| ||||||| ||| ||| || |||||||| |||||
Sbjct: 124 gctagaatgacttatattgtggaacggagggagtac 159
Score = 115 bits (58), Expect = 3e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| || |||||| |||||||||||| ||||| ||||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||||||||||||| | |||||| |||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 167 bits (84), Expect = 8e-41
Identities = 139/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| ||||||||||||||||||||||||||| | |||||||||||| |||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagtac 187
|| | ||||| ||||||| |||||||||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 117 bits (59), Expect = 7e-26
Identities = 123/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| || ||||||||||||||||||| |||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | |||||||||||||| || |||||||||||| ||||| ||||||| |
Sbjct: 76 tagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 129/143 (90%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| | ||||||||||||| ||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| |
Sbjct: 76 catatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||| ||||||| ||||
Sbjct: 136 tacattgtgatacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 140/158 (88%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 161 tgctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgata 102
Query: 91 ttgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaa 149
|| || |||||| | | |||||| | |||||||||||||| |||||||| |||||| |||
Sbjct: 101 ttaatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaa 42
Query: 150 atgcaagaatgaattacattatgaaacggaggaagtac 187
|||||| ||||| ||||||| |||||||||||||||||
Sbjct: 41 atgcaaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 129/143 (90%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||| | ||||||||||||||||||||||| | || |||||| |
Sbjct: 147 tttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||| |
Sbjct: 87 catatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 27 tacattgtgaaacggagggagta 5
Score = 141 bits (71), Expect = 5e-33
Identities = 129/147 (87%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | ||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 153 caagaatgaattacattatgaaacgga 179
|||||| |||||||||||||||||
Sbjct: 125 gtggaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 165 bits (83), Expect = 3e-40
Identities = 139/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct: 158 ctactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtt 99
Query: 93 gataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaat 151
|| |||||| | |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 98 aatgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||| |||||||||||||||
Sbjct: 39 gctagaatgacttacattgcgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 122/143 (85%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||| ||||||||||||||||| |||||| |||||||||||||||| | || |||||| |
Sbjct: 16 tttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| | |||| |||||||||||||||| || ||||| ||| || |||||| ||||||| |
Sbjct: 76 taga-atatatatctagattcattaacattaatataaatatgggaaatgttagaatgact 134
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 135 tacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 165 bits (83), Expect = 3e-40
Identities = 142/160 (88%), Gaps = 5/160 (3%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 104
Query: 93 gataaatctacacatatatatctatctagattcattaa-atca----atatgaatgtgag 147
|| |||||| ||||||||||||||||||||||||||| |||| ||||||| || |
Sbjct: 103 aatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcg 44
Query: 148 aaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||| ||||||| ||||||| |||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 107 bits (54), Expect = 6e-23
Identities = 125/147 (85%), Gaps = 5/147 (3%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat----tgatgttgataaatc 100
|||||||||||||||||||||| |||||| || ||||||| ||||||| || ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgttaatgaatc 75
Query: 101 tacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaat 159
|| | | |||||| | |||||||||||||| |||| |||||||||| ||||||| |||||
Sbjct: 76 tagatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaat 135
Query: 160 gaattacattatgaaacggaggaagta 186
|| ||||||| ||||||||||| ||||
Sbjct: 136 gacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 138/156 (88%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||||||| ||||||||| || |||||||||||| ||||||||| |
Sbjct: 159 ctactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| | ||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 99 aatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagtac 187
|| ||||||| ||||||| |||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtac 4
Score = 117 bits (59), Expect = 7e-26
Identities = 123/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatctaga 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | ||||||||||||| |||||||| |||||| ||||| | | ||||| |
Sbjct: 76 tagatatatatttctagattcattaccatcaatattaatgtgggaaattctaaaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|| ||| ||||||||||| ||||
Sbjct: 136 tagattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 157 bits (79), Expect = 8e-38
Identities = 131/147 (89%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| | | |||||| ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 153 caagaatgaattacattatgaaacgga 179
||||||| ||||||| |||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 125 bits (63), Expect = 3e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| |||||| |||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | |||||||||||||| ||||| |||||| | |||||| ||||||| |
Sbjct: 76 tagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 157 bits (79), Expect = 8e-38
Identities = 101/107 (94%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 56 aagtcattctaacatttcccacattcatattgatgttgataaatctacacatatatatct 115
||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatga 4
Score = 109 bits (55), Expect = 2e-23
Identities = 95/107 (88%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 56 aagtcattctaacatttcccacattcatattgatgttgataaatctacacatatatatct 115
||||||||||| |||||| |||||||||||||||||| || |||||| | | |||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
|||||||||||||| ||||||||||||||| ||||||| |||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 157 bits (79), Expect = 8e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||| |||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||||||||| | ||||||||||||| ||| |||||||| || | ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| ||||||| ||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
Score = 125 bits (63), Expect = 3e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| |||| |||| |||||||| |||||| || ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatctagt 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||| | |||||||||||||| || |||||||||||||||||||| ||||||| |
Sbjct: 76 tggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 155 bits (78), Expect = 3e-37
Identities = 109/118 (92%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaa 150
|| |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Score = 99.6 bits (50), Expect = 2e-20
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||| ||||||||||| |||||| |||||||||||||||||||| ||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||||||||||||| ||||||||||||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
||||||| ||||||| ||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 3e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||| | || ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| ||| || |||| |||||||||||||||||||||| |||||||||||| | ||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 2e-23
Identities = 122/143 (85%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| ||||| | |||| ||||||||| ||||||||||||| | | |||| ||||||| |
Sbjct: 76 tagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 151 bits (76), Expect = 5e-36
Identities = 137/155 (88%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| |||||||||||||| |||||| ||||| |||||||| ||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaat 121
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||| ||||||||||| ||||
Sbjct: 122 gctagaatgacttacattgtgaaacggagggagta 156
Score = 137 bits (69), Expect = 7e-32
Identities = 136/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 158 gctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgt 101
Query: 92 tgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaa 150
| ||||||||| | | |||||| | |||||||||||||| |||||||||||| || ||||
Sbjct: 100 taataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaa 41
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
||| |||||| ||||||| ||||||||||| ||||
Sbjct: 40 tgcttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 151 bits (76), Expect = 5e-36
Identities = 137/156 (87%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| ||||||||||||||||||| || |||||| ||||| ||||||||||
Sbjct: 160 gctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgc 101
Query: 92 tgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaa 150
| || |||||| ||||||||||| |||||||||||||| || | |||||||||| ||||
Sbjct: 100 taatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaa 41
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
||| ||||||| ||||||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 125 bits (63), Expect = 3e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||| | || || || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctaga 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | ||||||||||||| ||||||||| ||||||||||||| | ||||| |
Sbjct: 76 cggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 151 bits (76), Expect = 5e-36
Identities = 137/155 (88%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| |||||||||||||| |||||| ||||| |||||||| ||||| |||||
Sbjct: 97 aatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||| ||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 7e-32
Identities = 136/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgt 60
Query: 92 tgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaa 150
| ||||||||| | | |||||| | |||||||||||||| |||||||||||| || ||||
Sbjct: 61 taataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaa 120
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
||| |||||| ||||||| ||||||||||| ||||
Sbjct: 121 tgcttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||||||| |||||||||||| ||||| | | ||||||||||||| |
Sbjct: 159 ctactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgct 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||||
Sbjct: 99 aatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||| ||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 121/143 (84%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||| |||||||| |||||||||| || | |||| |
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactctaga 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | ||||||||||||| |||||||||||| | |||||| ||||||| |
Sbjct: 76 tagatatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|| ||| ||||||||||| ||||
Sbjct: 136 tatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| |||||||||| || ||| ||| ||||| || |||||||||||| ||||
Sbjct: 99 aatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| | ||||| ||||||| ||||||||||| ||||
Sbjct: 39 gctataatgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 4e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||||||| || ||||| ||||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|||||| || | |||||| | |||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | ||||||| | |||||||||||||| ||| ||||||||||||||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| ||||| ||||| | ||||||||||| |||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagtac 4
Score = 131 bits (66), Expect = 4e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||| ||||||||||| || |||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||| ||||| ||| ||||||||| || ||| ||||||||||| ||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||| |||||||||| | ||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||||| |||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| | ||||| |||| || |||||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagtac 159
Score = 109 bits (55), Expect = 2e-23
Identities = 122/143 (85%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||| |||||||||| || ||||||||||||| ||||||||||| || |||||| |
Sbjct: 147 tttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| | |||| | ||||||||||| || |||||||| |||||| ||||||||| ||||| |
Sbjct: 87 tagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgcaaaaatgact 28
Query: 164 tacattatgaaacggaggaagta 186
||| || ||||||||||| ||||
Sbjct: 27 tactttgtgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 1e-33
Identities = 127/144 (88%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| |||||||||||||| ||| ||||||||||||| ||||| || |||||| |
Sbjct: 16 tttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||| |
Sbjct: 76 taaatatatatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagtac 187
|| ||| ||||||||||| |||||
Sbjct: 136 tatattgtgaaacggagggagtac 159
Score = 139 bits (70), Expect = 2e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | |||||||| |||||||||||||||| || |||||||||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 141 bits (71), Expect = 5e-33
Identities = 135/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||||||| | |||| ||||||||| |||||||||||||| |||||
Sbjct: 96 atgaatctagacatatata--tgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| || |||||||||||||
Sbjct: 38 ctagaatgacttacattgtggaacggaggaagta 5
Score = 131 bits (66), Expect = 4e-30
Identities = 124/141 (87%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 48 cacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctacacat 107
||||||||||||||||||| ||||| | ||||||||||||||||| || ||| || ||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacat 78
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
||||| | |||||||||||||| ||||||||||||||| ||||||| ||||||| ||||
Sbjct: 79 atata--tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 136
Query: 167 attatgaaacggaggaagtac 187
||| || |||||||| |||||
Sbjct: 137 attgtggaacggagggagtac 157
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 5e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||||| |||| || | |||||||| ||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 63
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| ||||| | || |||||||||||||||| ||| ||||||||||||| | |
Sbjct: 64 aatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcatt 123
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggaggaagta 158
Score = 93.7 bits (47), Expect = 1e-18
Identities = 120/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| || | | ||||||||||| |||||| || |||||| |
Sbjct: 147 tttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||| | | | |||||||||||||| ||| |||||||| | | ||||| ||||||| |
Sbjct: 87 tatatgtctatgtctagattcattaacatctatatgaatataggcaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 27 tacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 141 bits (71), Expect = 5e-33
Identities = 99/107 (92%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 56 aagtcattctaacatttcccacattcatattgatgttgataaatctacacatatatatct 115
||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
|| |||||||||||| ||||||||||||||| ||||||| |||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
Score = 117 bits (59), Expect = 7e-26
Identities = 96/107 (89%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 56 aagtcattctaacatttcccacattcatattgatgttgataaatctacacatatatatct 115
||||||||||| ||||||||||||||||||||||||| || |||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
|||||||||||||| ||||||||||||||| ||||||| |||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 4
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 2e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| |||| ||||||| ||||| |||||| ||||||||| |
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||||||||||||||||||||||||| || |||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| | ||||| ||| ||| ||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 2e-23
Identities = 122/143 (85%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| ||||||||| || ||||||||||||||||||| ||||| || |||||| |
Sbjct: 16 tttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
| |||||| | ||||||||||||| |||||||| ||||||| |||||| |||||| |
Sbjct: 76 tagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggct 135
Query: 164 tacattatgaaacggaggaagta 186
|| ||| ||||||||||| ||||
Sbjct: 136 tatattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 137 bits (69), Expect = 7e-32
Identities = 135/156 (86%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||| |
Sbjct: 153 ctactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgct 94
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| |||||||| |||||||||||| ||||||||||||||| |||||
Sbjct: 93 aatgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagtac 187
|| ||||||| ||||||| |||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtac 4
Score = 103 bits (52), Expect = 1e-21
Identities = 121/143 (84%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||||| | || ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc---- 71
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
|| |||| | ||||||||||||| |||||||||||||| ||||||| ||||||| |
Sbjct: 72 --tagatatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgact 129
Query: 164 tacattatgaaacggaggaagta 186
|| ||| ||||||||||| ||||
Sbjct: 130 tatattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 3e-31
Identities = 121/138 (87%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||| || |||||||||||||| | | | |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaatctaga 75
Query: 105 catatatatctatctagattcatt-aaatcaatatgaatgtgagaaatgcaagaatgaat 163
|||| |||| | |||||||||||| | ||||||||||||||||||||||| ||||||| |
Sbjct: 76 catacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgact 135
Query: 164 tacattatgaaacggagg 181
|||||| |||||||||||
Sbjct: 136 tacattgtgaaacggagg 153
Score = 129 bits (65), Expect = 2e-29
Identities = 130/151 (86%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 160 gctaatccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 101
Query: 92 tgataaatctacacatatatatctatctagattcattaaat-caatatgaatgtgagaaa 150
|| |||||| |||||||| | | |||||||||| | | |||||||||||||||| |
Sbjct: 100 caatgaatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgagana 41
Query: 151 tgcaagaatgaattacattatgaaacggagg 181
||| ||||||| ||||||| |||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 135 bits (68), Expect = 3e-31
Identities = 125/143 (87%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| |||||||||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||| || |||||||||||| | ||||||||||||||| ||||||| ||||||| |
Sbjct: 76 cat------ctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgact 129
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 130 tacattatgaaacggagggagta 152
Score = 119 bits (60), Expect = 2e-26
Identities = 132/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 93 gataaatctacacatatatatctatctagattcatt-aaatcaatatgaatgtgagaaat 151
|| |||||| ||| | | |||||||||||| | ||||||||||||||| |||||
Sbjct: 93 aatgaatctagacaga------tgtctagattcattgacatcaatatgaatgtgggaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||||||||
Sbjct: 39 gatagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 133 bits (67), Expect = 1e-30
Identities = 133/155 (85%), Gaps = 10/155 (6%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| | | |||||||||||||| ||||||||||||||| |||||
Sbjct: 90 aatgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||| ||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 133 bits (67), Expect = 1e-30
Identities = 124/143 (86%), Gaps = 10/143 (6%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||| |||||||||||||| ||||||||||||||| ||||||| ||||||| |
Sbjct: 76 cat---------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 126
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 127 tacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 133 bits (67), Expect = 1e-30
Identities = 134/155 (86%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||||| |||| || | |||||||| ||||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| | ||| | || |||||||||||||||| ||| ||||||||||||| | |
Sbjct: 99 aatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcatt 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 121/143 (84%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| || | | ||||||||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||| | | |||||||||||||||| ||| |||||||| | | ||||| ||||||| |
Sbjct: 76 tatatgtctatatctagattcattaacatctatatgaatataggcaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 136 tacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 1e-30
Identities = 128/147 (87%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| |||||||||||| | ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||| ||||| |||||||||||||||| | | ||||||||||| ||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacgga 179
||||||| |||||||||| ||||||
Sbjct: 38 ttagaatgacttacattatggaacgga 12
Score = 121 bits (61), Expect = 4e-27
Identities = 119/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 51 aatgtaagtcattctaacatttcccacattcatattgatgttgataaatctacacatata 110
||||||||||||||||||||||||||||||||||| | |||| || |||||| | |||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 111 tatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacatt 169
|| | |||||||||||||| | | ||||||||||| |||||| ||||||| |||||||
Sbjct: 82 tagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Query: 170 atgaaacggaggaagta 186
||||||||||| ||||
Sbjct: 142 gtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 133 bits (67), Expect = 1e-30
Identities = 134/155 (86%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| || ||||||| | |||||||||||| ||| ||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| ||||||| |||||| |||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagtac 4
Score = 117 bits (59), Expect = 7e-26
Identities = 123/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||| ||||||||| |||| |||||||||||| |||| | || ||||||
Sbjct: 16 tttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatctagg 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||||| |||||||||||||| ||||||||||||||| |||||| ||||||| |
Sbjct: 76 catatatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| |||||||||||||||||||||||||| ||||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
||||||| ||||||||||||||||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 4e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| ||| ||||| |||||||||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||||||||||| ||| ||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| |||||||||| ||||||||||||||| ||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 4e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| |||| ||||| ||||| |||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | |||||||||||| ||| ||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 2e-29
Identities = 132/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 35 actccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttga 94
|||||||| ||||| |||||||||||||||| |||||||||||||||||| || |||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 95 taaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatgc 153
| |||||| |||||||||||||| |||||||| ||| || |||||||| | |||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 154 aagaatgaattacattatgaaacggaggaagta 186
||||||| ||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 105 bits (53), Expect = 3e-22
Identities = 126/149 (84%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| ||||||| | |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaaa-tcaatatgaatgtgagaaatg 152
| |||||| | | |||||| | |||||||||| ||| || ||||||||||| ||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 153 caagaatgaattacattatgaaacggagg 181
| ||||||| |||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 129 bits (65), Expect = 2e-29
Identities = 126/144 (87%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| |||||||||||| |||||||||| || ||||||||||| || ||||| |
Sbjct: 145 tttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctgga 86
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| |
Sbjct: 85 catatgc--ctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagtac 187
|||||| ||||||||||| |||||
Sbjct: 27 tacattgtgaaacggagggagtac 4
Score = 117 bits (59), Expect = 7e-26
Identities = 132/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| ||||| | ||| || | || ||||||||||| |||||||| || ||| ||||||
Sbjct: 65 atgaatct--agataggcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||| ||| ||||||||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 3e-28
Identities = 135/155 (87%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaat-gtgagaaat 151
|| |||||| ||||||||||||||||||||||||||| |||||||| | |||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtga-aaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 39 actagaatgacttacattgtgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| |||||||||||||||||||||| |||| | | ||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgt 62
Query: 92 tgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaa 150
| || |||||| | | |||||| | |||||||||||||| ||||||||||||||| ||||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaa 122
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
| | |||||| ||||||| ||||||||||| ||||
Sbjct: 123 tactagaatgtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 1e-27
Identities = 132/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| |||| |||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||| | || | |||||| ||||||||| ||| ||||| ||||| | ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 121/143 (84%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| |||| ||||||| ||||| |||||| || ||| || |
Sbjct: 16 tttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatttaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||| || | | |||||||||||||| ||| |||||||| || | ||||| ||||||| |
Sbjct: 76 tatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctagaatgact 135
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 136 tacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 123 bits (62), Expect = 1e-27
Identities = 131/155 (84%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| || ||| ||| |||||||||||| ||||||||||||||| ||||
Sbjct: 87 aatgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/156 (81%), Gaps = 13/156 (8%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||| |||| ||||| |||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 3 gctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 92 tgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaa 150
| || |||||| | ||||| |||||||| ||||||||||||||| ||||
Sbjct: 63 taatgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaa 110
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
||| ||||||| ||||||| |||||| |||| ||||
Sbjct: 111 tgctagaatgacttacattgtgaaaccgagggagta 146
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 121 bits (61), Expect = 4e-27
Identities = 125/144 (86%), Gaps = 3/144 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| ||||||||||| ||||||||||||||||| | ||||| || ||| || |
Sbjct: 16 tttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||||| |||||||||||||||| || | ||||||||||| |||||| ||||||| |
Sbjct: 76 catatata--tatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgact 133
Query: 164 tacattatgaaacggaggaagtac 187
|||||| ||||||||||| |||||
Sbjct: 134 tacattgtgaaacggagggagtac 157
Score = 109 bits (55), Expect = 2e-23
Identities = 131/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| |||||||||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| ||||| | |||||||| | |||| ||||||||| || | |||||||||| ||||||
Sbjct: 96 atgaatct--agatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ccagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 121 bits (61), Expect = 4e-27
Identities = 133/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct: 156 ctactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcc 97
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| ||||| || ||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 96 aatggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||| ||| ||||||||||||||||
Sbjct: 39 actagaatgacttatattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 119/143 (83%), Gaps = 4/143 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| |||||||||||| ||||||||||||||||||||| | || |||||| |
Sbjct: 16 tttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctaga 75
Query: 105 catatatatctatctagattcatt-aaatcaatatgaatgtgagaaatgcaagaatgaat 163
| ||||| ||||||| |||| ||||||||||||||| |||||| |||||| |
Sbjct: 76 tagatata---gtctagatccattggcatcaatatgaatgtgggaaatggtggaatgact 132
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 133 tacattatgaaacggagggagta 155
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| || |||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 160 gctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgc 101
Query: 92 tgataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaa 150
| || |||||| ||||||||||||||||| |||||||| |||||||||||| || |||
Sbjct: 100 taatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaa 41
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
| | ||||||| ||| | | || |||||||||||||
Sbjct: 40 tactagaatgacttatactgtggaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 109/133 (81%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 55 taagtcattctaacatttcccacattcatattgatgttgataaatctacacatatatatc 114
|||||||||||| |||| ||| ||||||||||||| | || ||| || | | ||||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatgctaatgaatttagatagatatata 85
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
| | ||||||||||| |||||||||||| ||||||||| ||||||| ||| ||| ||
Sbjct: 86 tgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtgg 145
Query: 174 aacggaggaagta 186
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 119 bits (60), Expect = 2e-26
Identities = 123/143 (86%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt------atctaga 69
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||| |||||||||| | ||||||| ||||||||||||||| ||| || ||||||| |
Sbjct: 70 catatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggctagaatgact 129
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 130 tacattgtgaaacggagggagta 152
Score = 107 bits (54), Expect = 6e-23
Identities = 132/158 (83%), Gaps = 5/158 (3%)
Strand = Plus / Minus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 155 tgctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatg 96
Query: 91 ttgataaatctacacatatatatctatctagattcattaaatcaatatgaatgtgagaaa 150
|| || | | || | | ||| || | |||||| || ||||||||||||||| |||
Sbjct: 95 ttaatgagtttagatagatacatatgtctaga-----tacatcaatatgaatgtggaaaa 41
Query: 151 tgcaagaatgaattacattatgaaacggaggaagtact 188
||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtact 3
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 117 bits (59), Expect = 7e-26
Identities = 130/156 (83%), Gaps = 12/156 (7%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| |||||| || |||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaaatcaatatgaatgtgagaaatgc 153
|| |||||| |||||||||||||||||||| |||||||||| |||||||
Sbjct: 65 atgaatctagacatatatatctatctagat------------tatgaatgtgggaaatgc 112
Query: 154 aagaatgaattacattatgaaacggaggaagtacta 189
||||||| ||||||| | |||||||||||||||||
Sbjct: 113 tagaatgacttacattgtaaaacggaggaagtacta 148
Score = 97.6 bits (49), Expect = 6e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
|||||| | |||||||||||||| |||||||||||| |||||||||| ||||||| ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttac 25
Query: 167 attatgaaacggaggaagtac 187
||||||||||||||| |||||
Sbjct: 24 attatgaaacggagggagtac 4
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 7e-26
Identities = 123/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||| ||||| ||| ||||||||||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||||| | |||||||||||||| ||| |||||||| |||| ||||| |||| | |
Sbjct: 76 catatatatgtgtctagattcattaacatctatatgaatatgagcaatgctagaaagtct 135
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 136 tacattatgaaacggagggagta 158
Score = 109 bits (55), Expect = 2e-23
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||| | ||||| |||| | || |||||||| ||||||
Sbjct: 159 ctactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| ||| |||||| | |||||||||||||| ||| ||||||||||| | |||
Sbjct: 99 aatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
| |||| || ||||||||||||||||||||||||
Sbjct: 39 actagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 3e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| ||||||||||||| || |||| ||||||||||||| |||| |
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||| | | |||||||||||||||| ||| ||||| || || | || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 9e-16
Identities = 121/146 (82%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| | || |||| || ||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||| | || | | ||||||||||| ||| ||||||||||| | ||||| | ||||| |
Sbjct: 76 tatagacatatgtttagattcattaccatctatatgaatgtgggcaatgctaaaatgact 135
Query: 164 tacattatgaaacggaggaagtacta 189
|||||||||||||||||| |||||||
Sbjct: 136 tacattatgaaacggagggagtacta 161
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 3e-25
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| |||| || |||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||| | || | |||||| ||||||||| ||| |||| ||||| | ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 97.6 bits (49), Expect = 6e-20
Identities = 122/145 (84%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| |||| ||||||| |||| |||||| || ||| || |
Sbjct: 147 tttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatttaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||| || | | |||||||||||||| ||| |||||||||| | ||||| ||||||| |
Sbjct: 87 tatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagtact 188
|||||||||||||||||| ||||||
Sbjct: 27 tacattatgaaacggagggagtact 3
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 1e-24
Identities = 124/144 (86%), Gaps = 3/144 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| || |||||||||||||||| | |||||| || |||| | |
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||||| | |||||||||||| ||| |||||||||||| |||||| | ||||| |
Sbjct: 76 catatatatgca--tagattcattaacatctatatgaatgtgaaaaatgctaaaatgact 133
Query: 164 tacattatgaaacggaggaagtac 187
| |||||||||||||||| |||||
Sbjct: 134 tgcattatgaaacggagggagtac 157
Score = 93.7 bits (47), Expect = 1e-18
Identities = 129/154 (83%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||| |||||||| || ||||| ||||||||||| ||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||||||| | || |||||||||| ||| | ||||||||| ||||||
Sbjct: 96 atgaatctatgcatatatatgt--cttgattcattaacatctacatgaatgtgggaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| | ||||| ||||||| ||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 111 bits (56), Expect = 4e-24
Identities = 122/143 (85%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||| ||| |||||||||||||| ||||| |
Sbjct: 141 tttcacaatgtaagtcattctagcattttccatattcatattgatgt------atctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||| |||||||||| | ||||||| ||| ||||||||||| |||||| ||||||| |
Sbjct: 87 catatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 27 tacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 6e-20
Identities = 130/157 (82%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||| |||||||||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatg 61
Query: 91 ttgataaatctacacatatatatctatctagattcattaaatcaatatgaatgtgagaaa 150
|| || | | || | | ||| || | |||||| || |||||||||||| || |||
Sbjct: 62 ttaatgagtttagatagatacatatgtctaga-----tacatcaatatgaatatggaaaa 116
Query: 151 tgcaagaatgaattacattatgaaacggaggaagtac 187
||| ||||||| ||||||| |||||||||||||||||
Sbjct: 117 tgctagaatgacttacattgtgaaacggaggaagtac 153
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 111 bits (56), Expect = 4e-24
Identities = 121/143 (84%), Gaps = 11/143 (7%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct: 137 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga------- 85
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||| | |||||||||||||| || ||||| |||||| ||||||| ||||||| |
Sbjct: 84 ---atatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgact 28
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||||||||
Sbjct: 27 tacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 2e-23
Identities = 123/146 (84%), Gaps = 11/146 (7%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||| ||||| ||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||| ||||||||| ||||||||||||||| ||||||| ||||||| |
Sbjct: 76 catatat----------attcattaacatcaatatgaatgtgggaaatgctagaatgact 125
Query: 164 tacattatgaaacggaggaagtacta 189
|||||| |||||||| || |||||||
Sbjct: 126 tacattgtgaaacggggggagtacta 151
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 107 bits (54), Expect = 6e-23
Identities = 131/158 (82%), Gaps = 14/158 (8%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| || |||||| ||||| |||||||| |||||||||||||
Sbjct: 85 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtactac 190
| ||||||| ||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagttctac 1
Score = 77.8 bits (39), Expect = 6e-14
Identities = 116/143 (81%), Gaps = 14/143 (9%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| |||||| |||||| ||||||||||| |||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatcta-- 73
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||||||||||| |||||||||||| || |||||| ||||||| |
Sbjct: 74 -----------gtctagattcattaacatcaatatgaatatggaaaatgctagaatgact 122
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 123 tacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 107 bits (54), Expect = 6e-23
Identities = 131/155 (84%), Gaps = 10/155 (6%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| || ||| | || | |||||||||||| ||||||||||||||| ||||
Sbjct: 90 aatgaaacta--------tgtc-acatagattcattaacatcaatatgaatgtggaaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||| |||| ||||| |||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 3 gctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 92 tgataaatcta 102
| || ||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 3e-22
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| ||| ||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
|||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 105 bits (53), Expect = 3e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaaa 75
Query: 105 catat 109
|||||
Sbjct: 76 catat 80
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||||||||||||||| |||||| ||||||| ||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 178 gag 180
|||
Sbjct: 13 gag 11
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 105 bits (53), Expect = 3e-22
Identities = 126/153 (82%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 94 ataaatctacacatatatatctatctagattcattaaatcaatatgaatgtgagaaatgc 153
||||||||| | |||||||| | | |||| ||||||||||| ||||||
Sbjct: 84 ataaatctagatatatatat-------------taacatcactatgaatgtgaaaaatgc 38
Query: 154 aagaatgaattacattatgaaacggaggaagta 186
||||||| ||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
|||||| |||||||||| ||||| |||| |||||||||| ||||| | ||||||| ||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 167 attatgaaacggaggaagtac 187
|||||||||| |||| |||||
Sbjct: 125 attatgaaacagagggagtac 145
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 105 bits (53), Expect = 3e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
|||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 174 aacggaggaagta 186
|||||||||||||
Sbjct: 103 aacggaggaagta 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
||||| |||||||||||||||| |||||||||||||||||||||| || || ||||||
Sbjct: 104 tttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatcta 47
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 31 tgctactccctctttttcacaatgtaagtcattcta 66
|||||||||||| ||||||||||||||||||||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 73.8 bits (37), Expect = 9e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||||||||||||||| ||||||| ||||||| ||||||| ||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 178 gaggaagta 186
|||| ||||
Sbjct: 122 gagggagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||| ||||| ||||||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtt 59
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| | ||||| ||| ||| |||||| |||||||||
Sbjct: 56 atcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaagta 1
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 76 atgaatcta 68
Score = 91.7 bits (46), Expect = 4e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
||||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 169 tatgaaacggaggaagta 186
| ||||||||||| ||||
Sbjct: 119 tgtgaaacggagggagta 136
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 105 bits (53), Expect = 3e-22
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 114 ctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatg 172
||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 173 aaacggaggaagtacta 189
|||||||||||||||||
Sbjct: 114 aaacggaggaagtacta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
||||||||| |||||||||||| |||||| |||||||||||||||||| || ||||||
Sbjct: 116 tttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatcta 59
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 147 gaaatgcaagaatgaattacattatgaaacggaggaagtact 188
||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagtact 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttc 73
|||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 105 catatata 112
||||||||
Sbjct: 76 catatata 83
Score = 87.7 bits (44), Expect = 6e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 176 cggaggaagtac 187
|||||| |||||
Sbjct: 15 cggaggtagtac 4
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 103 bits (52), Expect = 1e-21
Identities = 131/155 (84%), Gaps = 8/155 (5%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| ||||||||| || ||||||||| |||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 94 ataaatctacacatatatatctatctagattcattaaatcaatatgaatgtgagaaatgc 153
|| |||||| || ||||||||||||||||||||| || || |||||| |||||||
Sbjct: 89 atgaatctagac--atatatctatctagattcatt-----aacatcaatgtgggaaatgc 37
Query: 154 aagaatgaattacattatgaaacggaggaagtact 188
|||| || ||||||| |||||| |||||||||||
Sbjct: 36 tagaa-gacttacattgtgaaacagaggaagtact 3
Score = 71.9 bits (36), Expect = 4e-12
Identities = 127/154 (82%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||| ||||| |||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgtta 57
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | |||||| | ||||||||||||| |||||||||||| || ||||||
Sbjct: 58 atgaatctagatagatatatgt--ctagattcattaacatcaatatgaatatgggaaatg 115
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| | ||||| ||| ||| ||||||||||| ||||
Sbjct: 116 ctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 122/144 (84%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | ||||| |||| ||||||||||||| |||||| || |||||| |
Sbjct: 147 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||| | | |||||||||||||| ||| ||||||||||||| ||||| | || | |
Sbjct: 87 aatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtct 28
Query: 164 tacattatgaaacggaggaagtac 187
|||||||||||||||||| |||||
Sbjct: 27 tacattatgaaacggagggagtac 4
Score = 99.6 bits (50), Expect = 2e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | || || |||| | ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||| | |||| | |||||||||||||| ||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 122/144 (84%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | ||||| |||| ||||||||||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|||||| | | |||||||||||||| ||| ||||||||||||| ||||| | || | |
Sbjct: 76 aatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtct 135
Query: 164 tacattatgaaacggaggaagtac 187
|||||||||||||||||| |||||
Sbjct: 136 tacattatgaaacggagggagtac 159
Score = 99.6 bits (50), Expect = 2e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | || || |||| | ||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||| | |||| | |||||||||||||| ||| ||||||||||| | ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 4e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||||| ||||| ||||||||||||| || ||||| |||||||| | ||||||
Sbjct: 159 ctactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
| |||||| ||||||||| || |||||||| ||| ||| |||| ||| ||||||||
Sbjct: 99 agtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| ||||||| ||||||||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||||||||||| |||||| || ||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
| |||||| || ||||| | |||||||||| ||| ||| | ||||||||| |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| | ||||| |||||||||||||| |||| ||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 101 bits (51), Expect = 4e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| ||||| |||||||||||||||||| || |||||| |
Sbjct: 16 tttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatctaga 75
Query: 105 catatat 111
|| ||||
Sbjct: 76 caaatat 82
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatatt 86
|||||||||| ||||| |||||||||||||||| |||||| ||||||||||||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 4e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||| | || ||||||| |||||||||| || ||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtt 100
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| | |||||| | | |||||||||||||| ||| ||||||||||||| |||
Sbjct: 99 aatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaat 40
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
|| || | | ||||||| ||||||||||| ||||
Sbjct: 39 gctaggaagtcttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||| | | ||| |||| | ||||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtt 63
Query: 93 gataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaat 151
|| |||||| ||| | |||| |||||||||||||||| ||| || |||||||| | |||
Sbjct: 64 aatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaat 123
Query: 152 gcaagaatgaattacattatgaaacggaggaagta 186
| | || | ||||||| ||||||||||| ||||
Sbjct: 124 gttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 101 bits (51), Expect = 4e-21
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
|||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||
Sbjct: 77 tatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtga 18
Query: 174 aacggaggaagtact 188
|||||||| ||||||
Sbjct: 17 aacggagggagtact 3
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| || ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 87 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||||||||| | | |||||||| |||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| || |||||| | | || |||||||| ||| ||||||||||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 4e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| |||||||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| ||| || |||||||||| | ||||||||||| ||| |||||||| | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
||||||| ||||||| ||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 105 catata 110
||||||
Sbjct: 76 catata 81
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 176 cggaggaagtac 187
||||||||||||
Sbjct: 15 cggaggaagtac 4
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 133 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatcta 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
||||||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 169 tatgaaacggaggaagta 186
||||||||||||||||||
Sbjct: 113 tatgaaacggaggaagta 130
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| ||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
||||| |||||||| ||||||| ||||| |||||||||||||||||| || ||||||
Sbjct: 119 tttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatcta 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 97.6 bits (49), Expect = 6e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| |||||| || ||| |||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 94 ataaatctacacatatatatctatctagattcattaaatcaatatgaatgtgagaaatgc 153
||||||||| | | || |||||||| ||||||||||||||| |||||||
Sbjct: 85 ataaatctagatagatctatctatc------------atcaatatgaatgtgggaaatgc 38
Query: 154 aagaatgaattacattatgaaacggaggaagtac 187
| ||||| ||||||| |||||||||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggaggaagtac 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 117/143 (81%), Gaps = 14/143 (9%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatgat------------ 63
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
| ||| ||||||||||||| ||||| |||||||| ||| |||||||||| ||||||| |
Sbjct: 64 -agatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgact 122
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 123 tacattgtgaaacggagggagta 145
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 6e-20
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||||||| || ||||| ||| ||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
|||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 75 atgaatcta 67
Score = 73.8 bits (37), Expect = 9e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
|||||||||||||||| ||||||||||||||| |||||| ||||||| ||| ||| |||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 174 aacggaggaagta 186
|||||||| ||||
Sbjct: 123 aacggagggagta 135
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacattcatattgatgtt 63
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 95.6 bits (48), Expect = 2e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 121 gattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgga 179
|||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 180 ggaagtac 187
|| |||||
Sbjct: 135 gggagtac 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 121 gattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgga 179
|||||||||| ||||||||||||||| ||||||| ||||||| ||||||| |||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 180 ggaagta 186
|||||||
Sbjct: 11 ggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtt 83
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 8/154 (5%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| || ||||| ||| || || |||||||| |||||||| |||||| |||||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| ||||||||||||||||
Sbjct: 118 ctagaatgacttacattgtgaaacggaggaagta 151
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 140 tttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
||||||||||||||| |||||||||||| || ||||||| ||||||| ||||||||||||
Sbjct: 69 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaa 128
Query: 175 acggaggaagta 186
||||||||||||
Sbjct: 129 acggaggaagta 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
||||||||||||||| |||||||||||| || ||||||| ||||||| ||||||| ||||
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 175 acggaggaagtacta 189
||||||| |||||||
Sbjct: 16 acggagggagtacta 2
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
||||| |||||||||||||||| ||||||||| ||||||||||||||| || ||||||
Sbjct: 129 tttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 72
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 94 ataaatctacacatat 109
|| |||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||||||||||||||| ||||||| ||||||| ||| ||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 178 gaggaagtac 187
|||| |||||
Sbjct: 132 gagggagtac 141
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 93.7 bits (47), Expect = 1e-18
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||| |
Sbjct: 118 tttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatctaga 59
Query: 105 catatatatctatctagattcattaa 130
| |||||||||||||||| ||||||
Sbjct: 58 c--atatatctatctagatccattaa 35
Score = 93.7 bits (47), Expect = 1e-18
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
||||||| |||||| ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 119 cggaggaagta 129
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 93.7 bits (47), Expect = 1e-18
Identities = 116/140 (82%), Gaps = 13/140 (9%)
Strand = Plus / Minus
Query: 48 cacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctacacat 107
||||||||||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatcta----- 78
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
||||||||| |||||| ||||||||||||||| |||||| ||||||| ||||
Sbjct: 77 -------tatctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttac 25
Query: 167 attatgaaacggaggaagta 186
||| ||||||||||| ||||
Sbjct: 24 attgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 126/154 (81%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| ||||| || ||||| |||||| ||||||||||||||| ||||||
Sbjct: 65 atgtatcta------------gatatagatacattaacatcaatatgaatgtgggaaatg 112
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| ||||||| ||||||| || |||||||||||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagta 146
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgt 62
Query: 92 tgataaatcta 102
| || ||||||
Sbjct: 63 taatgaatcta 73
Score = 83.8 bits (42), Expect = 9e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 126 gctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 73.8 bits (37), Expect = 9e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||| ||||||||||| ||||||| ||||||| ||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 178 gaggaagta 186
|||| ||||
Sbjct: 13 gagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 130 aatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||| ||||||||||| ||||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 68 aatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 1e-18
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | |||||||||| ||||||||||||| |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| |||| ||| ||| |||||| |||| ||| ||||||||||| | ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| | || | |||||||||||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagtac 4
Score = 54.0 bits (27), Expect = 8e-07
Identities = 115/143 (80%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | || || |||| ||||||||||||| |||| | ||||||||| |
Sbjct: 16 tttcataatgtaagactttatagcattacccacattcatatagatgctaataaatctata 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
||||| | ||||||||||||| ||| ||||||||||| | |||| |||| | |
Sbjct: 76 tatataataatgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtct 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 30 ttgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 1 ttgctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Query: 90 gtt 92
|||
Sbjct: 61 gtt 63
Score = 83.8 bits (42), Expect = 9e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 30 ttgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||| |||| ||||||||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 136 ttgctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgat 77
Query: 90 gttgataaatctacacat 107
||| || |||||| ||||
Sbjct: 76 gttaatgaatctaaacat 59
Score = 73.8 bits (37), Expect = 9e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||||||||||||||| || |||| ||||||| ||| ||| |||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 178 gaggaagta 186
|||||||||
Sbjct: 124 gaggaagta 132
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 82
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 83 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 138
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 91.7 bits (46), Expect = 4e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| |||| ||| ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| | | ||||| | ||||||||||||| ||| || |||||||| | ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 117/143 (81%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | ||||| |||| |||||||||| || |||| | || |||||| |
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|| ||||| ||| |||||||||||| ||| ||||||||| | | ||||| |||| | |
Sbjct: 76 cacatataagtatatagattcattaacatctatatgaatgcgggcaatgctagaaagtct 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 91.7 bits (46), Expect = 4e-18
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 103 cacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
||||||||||||||||||||||||||| |||||||| ||| |||||||| | |||||||
Sbjct: 89 cacatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatga 30
Query: 162 attacattatgaaacggaggaagtac 187
||| ||| |||||||||||||||||
Sbjct: 29 cttatattgtgaaacggaggaagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 147 gaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||| | ||||| ||||||||||||||||||| |||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagtac 129
Score = 44.1 bits (22), Expect = 8e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| |||||||||||| ||||| || ||| |||||||||
Sbjct: 16 tttcacaatataagtcattctagtatttctcatatttatattgatg 61
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 93 gataaatcta 102
|| ||||||
Sbjct: 64 aatgaatcta 73
Score = 77.8 bits (39), Expect = 6e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||||||||||||||| |||||| ||||||| ||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 176 cggaggaagta 186
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacatt 80
||||| |||| |||||||||||||||||||||||||
Sbjct: 123 tttcataatggaagtcattctaacatttcccacatt 88
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 140 aatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| |||||| ||||||| || |||||||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||||| |||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| || ||| | ||||| ||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||| ||||||||||||| || || || |||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattttagcactttccacattcatattgatgtt 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||| ||| ||||||| ||||||| |||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 79 atgaatcta 71
Score = 83.8 bits (42), Expect = 9e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| |||||||||||| || ||||||| ||||||| ||||||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 176 cggaggaagtacta 189
|||||| |||||||
Sbjct: 129 cggagggagtacta 142
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcat 83
||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 94 ataaa 98
|||||
Sbjct: 77 ataaa 73
Score = 83.8 bits (42), Expect = 9e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||||||| ||||||| ||||||| |||| || ||||||||||| |||||
Sbjct: 82 atcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggagtac 138
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 89.7 bits (45), Expect = 2e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
|||||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 174 aacggaggaagta 186
|||||||| ||||
Sbjct: 111 aacggagggagta 123
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 124 ctactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 93 gataaatcta 102
|| ||||||
Sbjct: 64 aatgaatcta 55
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 148 aaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacattt 72
|||||||||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 2e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 178 gaggaagta 186
|||| ||||
Sbjct: 118 gagggagta 126
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| ||||| |||||||||||||||| |||||| || |||||||||||| |
Sbjct: 128 gctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatat 69
Query: 92 tgataaatcta 102
| || ||||||
Sbjct: 68 taatgaatcta 58
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatatt 86
|||||| |||| ||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 3 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||| |||||| |||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 2e-17
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 103 cacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
||||| |||||||||||||||||||||| ||||||||| | |||| |||||| | |||||
Sbjct: 46 cacatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatga 105
Query: 162 attacattatgaaacggaggaagta 186
||||||| ||||||||||||||||
Sbjct: 106 cttacattgtgaaacggaggaagta 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
||||||||||||||||||| || ||||| ||| | |||||||||||| || ||||||
Sbjct: 119 tttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatcta 62
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| ||| ||||||||||||||| || |||||||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 93 g 93
|
Sbjct: 76 g 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||| |||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 80 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 83.8 bits (42), Expect = 9e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| |||||||||||| || ||||||| ||||||| ||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 176 cggaggaagtacta 189
|||||| |||||||
Sbjct: 15 cggagggagtacta 2
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcat 83
||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 128 tttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 6e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 94 ataaatctacacatat 109
|| |||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 67.9 bits (34), Expect = 6e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||||||||||||||| |||||| ||||||| ||| ||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 178 gaggaagtac 187
|||| |||||
Sbjct: 132 gagggagtac 141
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 87.7 bits (44), Expect = 6e-17
Identities = 128/155 (82%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||| ||||||||| || ||||| ||||||| ||||||||| |
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | |||||| ||| |||||||| |||||| | |||||||||||||
Sbjct: 92 atgaatctagagatatat------ctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| | ||||| ||||||| |||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 54.0 bits (27), Expect = 8e-07
Identities = 116/143 (81%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| || |||||| |||||| | ||||||| | || ||| |
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaattt--- 72
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
| ||||||| ||||||||||||| |||||||| |||||| |||||| | ||||| |
Sbjct: 73 -agatatatc--tctagattcattagcatcaatataaatgtggaaaatgctaaaatgact 129
Query: 164 tacattatgaaacggaggaagta 186
|| ||| ||||||||||| ||||
Sbjct: 130 tatattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 87.7 bits (44), Expect = 6e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 133 caatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtact 3
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| |||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgctgtt 63
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| |||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| || |||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 87.7 bits (44), Expect = 6e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattcta 66
|||||||||| ||||||||||||||||| ||||
Sbjct: 112 ctactccctccgtttcacaatgtaagtcaatcta 79
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||||||||||| ||||||||||||||||||| || || || |||||| |
Sbjct: 124 tttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctaga 65
Query: 105 catatata 112
||||||||
Sbjct: 64 catatata 57
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| || |||||||||||| ||||||| ||||||| ||||||| |||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 125 cggaggaagta 135
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| ||||||| ||||||| ||||||| ||||| ||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 132/160 (82%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 30 ttgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||||||| |||||||||||||| | |||||||||| || | | | || |||
Sbjct: 162 ttgctactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagat 103
Query: 90 gttgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgaga 148
||| || |||||| |||||||||| | | |||||||||||| ||| | ||||||||| |
Sbjct: 102 gttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggt 43
Query: 149 aatgcaagaatgaattacattatgaaacggaggaagtact 188
||||| |||| | || |||||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttgcattatgaaacggaggaagtact 3
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||| ||| | ||||| |||| ||||||||||| | |||||| || |||||| |
Sbjct: 16 tttcataatgcaagactttctagcattacccacattcatttagatgttaatgaatctaaa 75
Query: 105 catatatatctatctagattcattaa 130
|| |||||| | ||||||||||||||
Sbjct: 76 cacatatatatgtctagattcattaa 101
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 87.7 bits (44), Expect = 6e-17
Identities = 129/155 (83%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 30 ttgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||||||| ||||||||| |||||||||||| ||| ||||||||| ||| |||
Sbjct: 160 ttgctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagat 101
Query: 90 gttgataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgaga 148
| || |||||| || |||||| | | ||||||||||| ||| ||||||||||| |
Sbjct: 100 actaatgaatctagccacatatatgt--ccagattcattaacatctatatgaatgtgggc 43
Query: 149 aatgcaagaatgaattacattatgaaacggaggaa 183
||||| ||||||| ||| |||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattatgaaacggaggaa 8
Score = 63.9 bits (32), Expect = 9e-10
Identities = 117/143 (81%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| ||| |||||||||||| |||| ||||||||||||| |||||| || ||||| |
Sbjct: 16 tttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctgga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||| | |||||||||||| ||| ||| ||||||| | ||| | ||||||| |
Sbjct: 76 catatatgtgg--ctagattcattagtatctataagaatgtgggcaatcctagaatgact 133
Query: 164 tacattatgaaacggaggaagta 186
|| ||| ||||||||||| ||||
Sbjct: 134 tatattgtgaaacggagggagta 156
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 3 gctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgt 62
Query: 92 tgataaatcta 102
| || ||||||
Sbjct: 63 taatgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
||||||||||||||| ||||||||||||||| |||||| | ||||| ||||||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaa 17
Query: 175 acggaggaagta 186
||||||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||| |||||||||| |||||||||| |||||||||||||||||||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 93 gataaatctacacatatat 111
|| |||||| | ||||||
Sbjct: 71 aatgaatctagatatatat 53
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
|||| |||||||||||||||| ||||||||||||||| ||||| ||| ||| ||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 169 tatgaaacggaggaagta 186
||||||||||| ||||
Sbjct: 113 ggtgaaacggagggagta 130
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 148 gctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgt 89
Query: 92 tgataaatcta 102
| || ||||||
Sbjct: 88 taatgaatcta 78
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
||||||||||||||| ||||||||||||||| |||||| | ||||| ||||||||||||
Sbjct: 75 atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaa 134
Query: 175 acggaggaagta 186
||||||| ||||
Sbjct: 135 acggagggagta 146
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 63
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||| ||||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 83.8 bits (42), Expect = 9e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||| ||||||||||| | ||||| |||| || |||||||||||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 176 cggaggaagtacta 189
||||||||||||||
Sbjct: 15 cggaggaagtacta 2
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||| ||||| |||| ||||||||||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctaga 75
Query: 105 catata 110
||||||
Sbjct: 76 catata 81
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 9e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||| ||||||||||| | ||||| |||| || |||||||||||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 176 cggaggaagtacta 189
||||||||||||||
Sbjct: 15 cggaggaagtacta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 118/143 (82%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||| ||||| |||| ||||||||||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|| | ||| | |||||||||||||| ||| | |||||| | || ||||| | || | |
Sbjct: 76 cacacata--tgtctagattcattaacatctagatgaatataagcaatgctacaaagtct 133
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 134 tacattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 80 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 135
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| |||||||||||| |||||| ||||||||||||||||
Sbjct: 124 tttcacaatataagtcattctagcatttctcacattcatattgatg 79
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||||||||||| ||||||| |||||| |||||| |||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 9e-16
Identities = 128/156 (82%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||||||||| |||||||||||||| | ||||| |||| ||||||||||| | ||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa---atcaatatgaatgtgagaaa 150
|| |||||| |||||| ||| | | |||||||||||| || ||||| ||||||| ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 151 tgcaagaatgaattacattatgaaacggaggaagta 186
||| | || | ||||||| ||||||||||| ||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||| ||| ||||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccaca 78
||||||||| ||| ||||||||| |||||||| |||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||||||
Sbjct: 140 ctactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtt 81
Query: 93 gataaatcta 102
|||||||||
Sbjct: 80 aataaatcta 71
Score = 58.0 bits (29), Expect = 5e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 111 tatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacatt 169
||||||| |||||| ||||| |||||||| | |||| |||||| ||||||| |||||||
Sbjct: 63 tatctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
Query: 170 atgaaacggaggaagta 186
||||||||||| ||||
Sbjct: 123 gtgaaacggagggagta 139
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| ||||||||||||||||||| || ||||| |||| | ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 83.8 bits (42), Expect = 9e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 94 ataaat 99
||||||
Sbjct: 65 ataaat 70
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 67.9 bits (34), Expect = 6e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
|||| |||||| ||| ||||| |||||||| |||||| ||||||| ||||||| ||||||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacat 23
Query: 169 tatgaaacggaggaagta 186
| ||||||||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 9e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
||||||||||||||||||||| |||||||| | |||| |||||| ||||||| ||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 169 tatgaaacggaggaagta 186
| ||||||||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||||||||| | ||||||| ||||||| | ||||||||| |||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| ||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
|||||||||||||||||||||| ||||| ||| | ||||||||||| || ||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatcta 62
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 83.8 bits (42), Expect = 9e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| ||| |||||||||||||||||| ||||||||||||||||||| || |||||| |
Sbjct: 128 tttcataatataagtcattctaacattttccacattcatattgatgttaatgaatctaga 69
Query: 105 catata 110
||||||
Sbjct: 68 catata 63
Score = 77.8 bits (39), Expect = 6e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||||||||||||||| ||||| ||||||| ||| |||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 129 cggaggaagta 139
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||| || ||||||| |||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 60 atcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| |||||||||||||||| ||||| |||||| || ||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtt 63
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 80
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
||||||||||||||| || |||||||||||| ||||||| ||||||| ||| ||| |||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 174 aacggaggaagtac 187
|||||||| |||||
Sbjct: 120 aacggagggagtac 133
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 tttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
||||||||||||||| || |||||||||||| ||||||| ||||||| ||| ||| |||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 174 aacggaggaagtac 187
|||||||| |||||
Sbjct: 17 aacggagggagtac 4
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
||||| |||||||||| ||||||||||||||| ||||||| | ||||| ||||||| |||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 174 aacggaggaagta 186
|||||||||||||
Sbjct: 122 aacggaggaagta 134
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 136 gctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgt 77
Query: 92 t 92
|
Sbjct: 76 t 76
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
||||||||||||||| |||||| | ||||| ||||||| ||||||||| | ||||||
Sbjct: 60 atcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagtact 3
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttccatattcatattgatgtt 63
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 114 ctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatg 172
||||||| ||||||||| |||||||||||| || ||||| ||||||| ||||||| ||
Sbjct: 78 ctatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 173 aaacggaggaagta 186
||||||||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
|||||||||||| ||| |||| | | ||||| ||||||||||||||||||| ||||||
Sbjct: 81 atcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtact 138
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 128/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | || || ||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||| ||| ||||||| |||||||| ||| |||||||| || | |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 153 caagaatgaattacattatgaaacggaggaagtact 188
| |||| | ||| ||||||||||||||| ||||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagtact 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 92/113 (81%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| ||| |||| | ||||| ||| |||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtg 145
|| || ||| | ||||| || | |||||||||||||| ||| |||||||||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
|||||| | |||||||||||||| ||| ||||||||||| | ||||| ||||||| ||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 167 attatgaaacggaggaagta 186
||||||||| ||||||||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||||||||||| |||| | ||||||||||| |||||| || |||||| |
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 105 catatatat 113
|||||||||
Sbjct: 61 catatatat 53
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 149 aatgcaagaatgaattacattatgaaacggaggaagta 186
||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| ||||| |||||||||||||||| |||| || | ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 103 tttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcat 83
||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
||||||||| |||||||||||||| ||||||| ||||||| ||||||| ||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 181 gaagta 186
||||||
Sbjct: 109 gaagta 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 137 atgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||| ||||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 128/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | || || ||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||| ||| ||||||| |||||||| ||| |||||||| || | |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagtact 188
| |||| | ||| ||||||||||||||| ||||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagtact 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 92/113 (81%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| ||| |||| | ||||| ||| |||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtg 145
|| || ||| | ||||| || | |||||||||||||| ||| |||||||||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 16 tttcacaatgcaagtcattctagcatttcccacattcatattgatgtt 63
Score = 73.8 bits (37), Expect = 9e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 123 ttcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggagg 181
|||||||| ||||||||||||||| ||||||| ||||||| || |||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 182 aagta 186
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||| |||||||| || ||||||||| ||||||||||||||| ||||||||| |
Sbjct: 125 tttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctaga 66
Query: 105 catatata 112
||| ||||
Sbjct: 65 catttata 58
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||| ||||| |||||||||||| || ||||||| | ||||| || |||| |||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 126 cggaggaagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 138 tgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||||| ||||| | ||||| | ||||||| |||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattca 82
||||||||||||||| |||||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||||||||||||||||||||| | | ||||| ||||||| |||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 176 cggaggaagtac 187
|||||| |||||
Sbjct: 137 cggagggagtac 148
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 87 atgaatcta 79
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 44 ttttcacaatgtaagtcattctaacatttcccacattcatattga 88
|||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 105 ttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 130 aatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||
Sbjct: 61 aatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 132 tcaatatgaatgtgagaaatgcaagaatgaattacattatg-aaacggaggaagta 186
|||||||||||||| ||||||| ||||||| ||| ||| || ||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggagg 181
||||||||||||||||||||||| ||||||| ||||||| |||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 6e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 32 gctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||| |||||| |||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 140 gctaatccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgt 81
Query: 92 tgataaatctacacatata 110
|| |||||| |||||||
Sbjct: 80 caatgaatctagacatata 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||| | || |||||||||||||||||||| ||||||| ||||||| |||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 176 cggagg 181
||||||
Sbjct: 128 cggagg 133
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| | ||||| ||||||||||||||||||| ||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 114 ctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaattacattatg 172
|||||||||||||||| |||| |||||||||| |||||| ||||||| ||| ||||||
Sbjct: 78 ctatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatg 19
Query: 173 aaacggaggaagta 186
|||| |||||||||
Sbjct: 18 aaacagaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||| ||||| ||||| ||| |||||||||||| ||||| ||||||||||| |||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatg 61
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 6e-14
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 74 ccacattcatattgatgttgataaatctacacatatatatctatctagattcattaa-at 132
|||||||||||| |||||| || |||||| ||| | |||| | |||||||||||||| ||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 133 caatatgaatgtgaga-aatgcaagaatgaattacattatgaaacggaggaagta 186
| |||||||||| ||| ||||| |||| | ||||||||||||||||||||||||
Sbjct: 58 ctatatgaatgt-agacaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 116/143 (81%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | ||||| |||| | |||||||||| |||||| || |||||| |
Sbjct: 16 tttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||| | | | |||||||||||| ||| ||||||||||| || | |||| | |
Sbjct: 76 catatatgtgtgtttagattcattaacatctatatgaatgtggacaaacctagaaagtct 135
Query: 164 tacattatgaaacggaggaagta 186
|||||||||||||||||| ||||
Sbjct: 136 tacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||||||| | ||| || ||||| |||||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
||||||||||||||| |||||| | ||||| ||||||| ||||||||||| ||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtact 3
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||||||| |||||| | ||| ||||||||| ||||||||||| |||||
Sbjct: 73 atcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagtac 129
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt 63
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 63.9 bits (32), Expect = 9e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 119 tagattcattaaatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgg 178
||||||||| | ||||||||||||||| |||||| ||||| | ||||||| ||||||||
Sbjct: 72 tagattcataacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgg 13
Query: 179 aggaagta 186
||| ||||
Sbjct: 12 agggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| || |||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 76 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 121 tttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| || |||||||||||||||| || ||||||||| ||| ||||||||| |
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 94 ataaatctacacat 107
|| |||||| ||||
Sbjct: 65 atgaatctagacat 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
||||||||||||| |||||||| ||| || ||||||| | ||||| ||||||| || ||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 176 cggaggaagta 186
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| |||| |||| |||||| | |||| |
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||| ||| | | |||||||||||| || ||||| ||||| | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 116/143 (81%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||| | ||||| |||| ||||||| ||||| ||||| || |||||| |
Sbjct: 16 tttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaatctaaa 75
Query: 105 catatatatctatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaat 163
|| ||| || | ||||||||||||| ||| | |||||| || | ||||| |||| | |
Sbjct: 76 cacatacatatgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtct 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcat-tctaacatttcccacattcatattgatgtt 92
||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 93 gataaatcta 102
|| ||||||
Sbjct: 65 aatgaatcta 74
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 126 tttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| || ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 63.9 bits (32), Expect = 9e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatg 40
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 64 ctaacatttcccacattcatattgatgttgataaatctacacatatatat 113
||||||||||||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 116 ctaacatttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 64 ctaacatttcccacattcatattgatgttgataaatctacacatatatat 113
||||||||||||||||||||||||||| | || || ||| ||||||||||
Sbjct: 1 ctaacatttcccacattcatattgatgctaatgaaactagacatatatat 50
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 118 ctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaac 176
|||||||||||| ||||||||||||||| ||||||| | ||||| ||||||| ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 177 ggaggaagta 186
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcat-tctaacatttcccacattcatattgatg 90
|||||||||| |||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 144 ctactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgc-aagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| || |||| ||||||| ||||||||||| ||||
Sbjct: 87 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 143
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
||||||||| |||||||||||||| ||||||| ||||||| ||||||| ||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 181 gaagta 186
||||||
Sbjct: 121 gaagta 126
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 115 tttcacaatgtaagtcattctagcatttccaacattcatattgat 71
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||| ||| ||||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 94 ataaat 99
||||||
Sbjct: 65 ataaat 70
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
|||| |||||| ||| ||||| |||||||| |||||| |||||| ||||||| ||||||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacat 23
Query: 169 tatgaaacggaggaagta 186
| ||||||||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | || || |||| ||||||||||||| ||| |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||||| | | |||||||||||||| || ||||||||||| | || |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | |||||||||||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaaccgaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 116/144 (80%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | ||||| | || ||||||||||||| ||||| || |||||| |
Sbjct: 16 tttcataatgtaagactttctagccttgcccacattcatatatatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcatt-aaatcaatatgaatgtgagaaatgcaagaatgaat 163
|| | |||| | | |||||||||| | ||| ||||||||||| | ||||| | || | |
Sbjct: 76 cacacatatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtct 135
Query: 164 tacattatgaaacggaggaagtac 187
||||||||||||| |||| |||||
Sbjct: 136 tacattatgaaaccgagggagtac 159
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 118 ctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaac 176
|||||||||||| ||||||||||||||| ||||||| | ||||| ||||||| ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 177 ggaggaagta 186
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 132 tttcacaatgtaagtcattttagcatttcccacattcatattgatg 87
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcat-tctaacatttcccacattcatattgatg 90
|||||||||| |||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgc-aagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| ||||||| || |||| ||||||| ||||||||||| ||||
Sbjct: 61 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 75.8 bits (38), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 58.0 bits (29), Expect = 5e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatatt 86
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||||||||||| ||||| | ||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagtac 4
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||||||||| |||||| |||||| |||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 137 atgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtactac 190
||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagtactac 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 48 cacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatattgatg 58
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcat 83
||||||||| ||||||||||||| |||||||| |||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 75.8 bits (38), Expect = 2e-13
Identities = 87/102 (85%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 60 cattctaacatttcccacattcatattgatgttgataaatctacacatatatatctatct 119
|||||||||||||||||||||||||| | |||| || |||||| | ||||||| | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 120 agattcattaa-atcaatatgaatgtgagaaatgcaagaatg 160
||||||||||| | | ||||||||||| |||||| ||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 81/94 (86%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 60 cattctaacatttcccacattcatattgatgttgataaatctacacatatatatctatct 119
||||||| ||||| |||||||||||| | |||| || |||||| |||| ||||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 120 agattcattaa-atcaatatgaatgtgagaaatg 152
||||||||||| | | ||||||||||| ||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatg 94
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||| | |||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 94 ataaatctacacatata 110
| |||||| |||||||
Sbjct: 78 gtgaatctagacatata 62
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 9e-13
Identities = 107/128 (83%), Gaps = 3/128 (2%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatc--tacacatatatatctatct 119
||||| |||| ||||||||||||| |||||| || |||| |||||| | |||| ||| |
Sbjct: 132 ttctagcattgcccacattcatatagatgttaatgaatctatacacacacatatatatat 73
Query: 120 agattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgg 178
||||||||||| ||| ||||||||||| | ||||| |||| | ||| | ||||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacgg 13
Query: 179 aggaagta 186
||||||||
Sbjct: 12 aggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 104/128 (81%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatata--tatctatct 119
||||| |||| ||||||||||||| |||||| || |||||| | ||||| | | | | |
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtat 92
Query: 120 agattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgg 178
||||||||||| ||| ||||||||||| | ||||| |||| | ||| | ||||||||||
Sbjct: 93 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacgg 152
Query: 179 aggaagta 186
||| ||||
Sbjct: 153 agggagta 160
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||||||||| | ||||||| ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||| ||||| ||||||||||||| |||||||| |||||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| ||||||| ||||| | ||||| |||||||||||||| |||| ||||
Sbjct: 88 atcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 73.8 bits (37), Expect = 9e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||| | ||||| |||| ||||||||||||| |||||| ||||||||| |
Sbjct: 123 tttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatctaga 64
Query: 105 catat 109
|||||
Sbjct: 63 catat 59
Score = 54.0 bits (27), Expect = 8e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||| ||||| ||| ||||||||||| | ||||| |||| | ||||||| |||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 124 cggaggaagta 134
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 73.8 bits (37), Expect = 9e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 57 aatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| |||||| |||||| ||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 9e-13
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| |||| ||||||| ||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa 130
||||||||| ||||||| || | | ||||||||||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaa 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 92/113 (81%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 77 cattcatattgatgttgataaatctacacatatatatctatctagattcattaa-atcaa 135
||||||| | |||||| || |||||| |||||| ||| | |||||||| ||||| ||| |
Sbjct: 48 cattcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
Query: 136 tatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
||| ||||| | ||||| |||| | ||||||| ||||||||||| ||||||
Sbjct: 108 aatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggagtact 160
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||||||||||| ||||| | | |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 115 tatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
|||||||||||||||| |||||||||||| | |||||| ||||||| ||||||| |||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 174 aacggaggaagtact 188
|||||||| ||||||
Sbjct: 17 aacggagggagtact 3
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| |||||||||||| |||||| |||||||||||||||||
Sbjct: 127 tttcacaatataagtcattctactatttcctacattcatattgatgtt 80
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||| ||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 83 atcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaagta 138
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 73.8 bits (37), Expect = 9e-13
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||||||| ||||||||||||||| || ||||||||| || |||||| |||| || |
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 164 tacattatgaaacggaggaagtact 188
|||||| ||||||||||||||||||
Sbjct: 112 tacattgtgaaacggaggaagtact 136
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| ||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
|||||||||||||||| ||||| ||||| ||| ||||||||| ||||| || ||||||
Sbjct: 123 tttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatcta 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||| ||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 71.9 bits (36), Expect = 4e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
|||||||||||||| |||||||||||||||| |||||| ||||| | ||||||| ||||
Sbjct: 76 atctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaa 17
Query: 175 acggaggaagta 186
||||||| ||||
Sbjct: 16 acggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatg 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| ||||||||||||| ||||| || ||||| | ||||| |||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatg 90
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Score = 67.9 bits (34), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
||||||||| |||||||||||| || |||||| ||||||| ||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 181 gaagta 186
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 126 attaaatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
|||| |||||||||||| || |||||| ||||||| ||||||||||||||||||
Sbjct: 69 attacatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||| |||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 118 tttcataatgtaagtcattctagcattttccatattcatattgatgt 72
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 120 agattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgg 178
||||||||||| |||||| |||||||| ||||||| ||||||| ||| ||| ||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 179 aggaagta 186
||||||||
Sbjct: 128 aggaagta 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||||
Sbjct: 138 tgctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgat 80
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
|||||||||| ||||||||| |||||||||||| |||||| |||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatataagtcattctagcatttcacacattcacattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| |||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||
Sbjct: 60 atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcata 84
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 84 tttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 136 tatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttc 73
|||||||||| |||||||||||||||||||||| ||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| || |||| ||||||||||||||||||| |||||| || |
Sbjct: 16 tttcacaatgtaagtcattttagtattttccacattcatattgatgttaataaatttata 75
Query: 105 cata 108
||||
Sbjct: 76 cata 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||| | | ||||| ||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| |||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacatt 80
||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat 85
|||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||| |||||| ||||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 140 aatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| ||||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattga 88
||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 103 tttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 132 tcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 63.9 bits (32), Expect = 9e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
Score = 58.0 bits (29), Expect = 5e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 130 aatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||
Sbjct: 60 aatcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
||||||||||||| |||||||| ||| |||||||||| | ||||| ||||||| |||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| ||||||||| ||||||||| || ||||| |||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||||||||||||| || |||||| || ||| ||||||||| | || |||||| |
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctaga 75
Query: 105 catata 110
||||||
Sbjct: 76 catata 81
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||||| | ||||| ||| ||| ||||||||||| ||||
Sbjct: 84 atcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| ||||||||| |||||| |||| |||||||||||| ||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 94 ataaatctacacata 108
||||||||| |||||
Sbjct: 77 ataaatctagacata 63
Score = 58.0 bits (29), Expect = 5e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 138 tgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| | ||||| ||||| | ||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||| ||||| ||| ||||||||||| ||||| ||||| | |||||||||||||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 176 cggaggaagta 186
|||||| ||||
Sbjct: 127 cggagggagta 137
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattga 88
||||||||| |||||||||||||||||||||| |||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 132 tcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
||||||| || ||| ||||||| ||||||| ||||||| ||||||||||| ||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtact 3
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
||||||||||||| |||||||||||| || ||||| | ||||||| |||||||||||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 176 cggaggaagta 186
|||||| ||||
Sbjct: 126 cggagggagta 136
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||| ||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatg 80
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| |||||||| | ||||| | ||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||||||||| |||||| ||||| || |||||||||||||
Sbjct: 16 tttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 1e-11
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
||||||||| ||||||||| |||||| |||||| ||||||| ||||||| ||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 181 gaagtac 187
|||||||
Sbjct: 10 gaagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt-tcacatccatattgatgtt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 137 atgaatgtgagaaatgcaagaatgaattacattatgaaacggagg 181
|||||||||| |||||| ||||||| ||||||| |||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaacggagg 107
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacattt 72
|||||||||||||||||||||| |||||
Sbjct: 101 tttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 126/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| ||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||||| | |||| ||||||||| ||| |||||||| || | | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 153 caagaatgaattacattatgaaacggaggaagtac 187
| |||| | ||||||| ||||||||||| |||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 124/154 (80%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| | | |||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| ||| || ||| |||| | |||||||||||||| ||| ||||||||||| | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
|||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 56 aagtcattctaacatttcccacattcatattgatgtt 92
||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgtt 37
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 56 aagtcattctaacatttcccacattcatattgatgtt 92
||||||||||| |||||||||||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgtt 87
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||| ||||| |||||| ||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtt 63
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 143 gtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttc 73
|||||||||||||||||||||| ||||||
Sbjct: 115 tttcacaatgtaagtcattctagcatttc 87
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| |||||||| ||||||| ||||| | ||| ||| ||||||||||| ||||
Sbjct: 60 atcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 117/143 (81%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||| | ||||| |||| |||| |||||| | |||||| || |||||| |
Sbjct: 16 tttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||| ||| ||| |||||||||||| ||| ||||| | ||| | ||| | |||| | |
Sbjct: 76 catatgtatgtatttagattcattaacatccatatgtacgtgggcaatactagaaagtct 135
Query: 164 tacattatgaaacggaggaagta 186
|||||| ||||||||||| ||||
Sbjct: 136 tacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 6e-11
Identities = 125/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| ||| ||||| | ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | | ||| || | |||||||||||||| ||| | |||||| || | ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||| |||||||||||| ||||||||||||| ||| |||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtt 63
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||||||||| ||||||| | ||||| ||||||| |||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||||||||||||| || |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 123 ttcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggagg 181
|||||||| |||| ||| |||||| ||||||| ||||||| ||| ||| |||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 182 aagta 186
||||
Sbjct: 117 gagta 121
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacat 79
||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 141 atgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||| ||||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatt 71
||||||||| ||||||||||||| |||||||| ||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 149 aatgcaagaatgaattacattatgaaacggaggaagta 186
||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 30 ttgctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgat 89
||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||
Sbjct: 1 ttgctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgat 60
Query: 90 gt 91
||
Sbjct: 61 gt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 132 tcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||| | ||||||| ||||||||||||| ||||| ||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||||| |||| | | ||||| ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattga 88
||||||||| ||||| |||||||||||||||| |||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 67.9 bits (34), Expect = 6e-11
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| |||||| |||||| |||||| || || ||| ||| |||||| | |||||
Sbjct: 33 ttctagcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctag 92
Query: 122 attcatta-aatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
|||||||| ||| ||||||||||| | ||||| |||| | ||| | ||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 152
Query: 181 gaagta 186
||||||
Sbjct: 153 gaagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 103/126 (81%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| ||||||||||||| |||| | || |||||| |||||||||| | | |||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtatag 71
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
|||||||| ||| |||||| |||| | ||||| |||| | ||| | ||||||||||||
Sbjct: 70 gttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 181 gaagta 186
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| |||||||||||||| | ||||| |||| |||||||||||| ||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 93 gataaatcta 102
|||||||||
Sbjct: 81 aataaatcta 72
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 6e-11
Identities = 125/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| |||| ||| || ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| | ||||| | | |||||||||||||| | | | ||||||||| | ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 118/145 (81%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||| | ||||| |||| ||||||||||| | | |||| || |||||| |
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatctaga 75
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||| | ||| ||| |||||||||||| ||| ||||| || || ||||| |||| | |
Sbjct: 76 catgtgtatatatttagattcattaacatctatatgtatatggacaatgctagaaagtct 135
Query: 164 tacattatgaaacggaggaagtact 188
|||||| ||||||||||| ||||||
Sbjct: 136 tacattgtgaaacggagggagtact 160
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||||||||| ||||||| ||||||| ||| ||| |||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 108 tttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgga 179
|||||||||||| || ||||||| ||||||| ||| ||| |||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 40 ctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
|||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 11 ctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| ||||||||| || ||||| || ||||||||||||| | || |||||| |
Sbjct: 121 tttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctaga 62
Query: 105 catatatat 113
|||||||||
Sbjct: 61 catatatat 53
Score = 46.1 bits (23), Expect = 2e-04
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
|||||| | ||||||||||||| |||||||||||| | |||||| | ||||| |||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 167 attatgaaacggaggaagt 185
||| |||||||||||||||
Sbjct: 113 attgtgaaacggaggaagt 131
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 67.9 bits (34), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggag 180
||||||||| |||||||| || |||| |||||| ||||||| ||||||| ||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 181 gaagta 186
||||||
Sbjct: 126 gaagta 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||||||||||||||| ||||| ||| || |||||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcatttttcacgtttatattgatgtt 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacattt 72
||||||||| ||||||||||||||||||| || |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 6e-11
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| ||||||||||||| |||||| || |||||| || |||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaa 158
||||||||| || ||||||||||| | ||||| ||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
Score = 60.0 bits (30), Expect = 1e-08
Identities = 82/98 (83%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| ||||||||||||| ||||| || |||||| | |||||||| | ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaa 158
||||||||| ||| ||||||||||| | ||||| ||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 55 taagtcattctaacatttcccacattcatattgatgttgataaatctacacatatat 111
|||||||||||| |||||| |||||||||||||||| | || |||||| ||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 51 aatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatg 40
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacatt 169
||||||||||||||||||||||| ||||||| |||||||
Sbjct: 39 atcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatga 161
||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 55 tctagattcattagcatcaatatgaatgtgagaaatgctagaatga 100
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||||||||||||| |||||| ||||| ||||| | |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 9e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 109 tatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattaca 167
||||||||| |||||||||||| |||||||| | |||| |||||| ||||| | |||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 168 ttatgaaacggaggaagtac 187
|| ||||||||||| |||||
Sbjct: 23 ttgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcat 62
|||||||||| ||||||||||||||||||
Sbjct: 127 ctactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 118/145 (81%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||| | || || |||| |||| |||||| | |||||| || |||||| |
Sbjct: 147 tttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatctaga 88
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
||||| ||| | | |||||||||||| || ||||| || |||| ||||| |||| | |
Sbjct: 87 catatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgctagaaagtct 28
Query: 164 tacattatgaaacggaggaagtact 188
|||||| ||||||||||| ||||||
Sbjct: 27 tacattgtgaaacggagggagtact 3
Score = 60.0 bits (30), Expect = 1e-08
Identities = 124/154 (80%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| |||| | || || ||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||| ||| || | |||||||||||||| ||| | |||||| || | ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| | || | ||||||| ||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatg 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 118 ctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaac 176
|||||||||||| ||||||||||| |||| ||||| ||||||| ||||||| ||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 177 ggaggaagta 186
||||| ||||
Sbjct: 122 ggagggagta 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 16 tttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggagg 181
|||||||| ||||||||| ||||||| ||| ||| |||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 65.9 bits (33), Expect = 2e-10
Identities = 75/87 (86%), Gaps = 4/87 (4%)
Strand = Plus / Minus
Query: 68 catttcccacattcatattgatgttgataaatctacacatatatatctatctagattcat 127
|||||||||| ||||||||||| || || |||||| | |||||||||||||||||||
Sbjct: 87 catttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcat 31
Query: 128 taa-atcaatatgaatgtgagaaatgc 153
||| ||||||||||| ||| |||||||
Sbjct: 30 taatatcaatatgaacgtgggaaatgc 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 74/87 (85%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 68 catttcccacattcatattgatgttgataaatctacacatatatatctatctagattcat 127
|||||||||| ||||||||||| || || |||||| | | ||||| ||||||||||||
Sbjct: 5 catttcccacgttcatattgatattaatgaatctagatagatata---atctagattcat 61
Query: 128 taa-atcaatatgaatgtgagaaatgc 153
||| ||||||||||| ||| |||||||
Sbjct: 62 taatatcaatatgaacgtgggaaatgc 88
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| ||||||||||||| |||||||| ||||| | |||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatg 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
|||||||||||||| |||||||| ||| ||| |||| | ||||||| ||||||| ||||
Sbjct: 76 atctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaa 17
Query: 175 acggaggaagta 186
||||||| ||||
Sbjct: 16 acggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||| |||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 91 atcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacggagggagta 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattcta 66
||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 63.9 bits (32), Expect = 9e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaa 174
||||||||||||||| ||| |||||||| |||| ||||| |||| || ||| ||||||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17
Query: 175 acggaggaagta 186
|| |||||||||
Sbjct: 16 acagaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 9e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||||||||| ||||| |||||||| | ||||| |||| |||||||||||| ||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 94 ataaatctacacatatatat 113
|| |||||| |||| |||||
Sbjct: 72 atgaatctagacatctatat 53
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 176 cggaggaagtact 188
| |||| ||||||
Sbjct: 122 cagagggagtact 134
Score = 44.1 bits (22), Expect = 8e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
|||| |||| |||||| |||||||| | ||||| |||| |||||||||||| |||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| |||||||||||||| ||||||| ||| ||| | ||||||||||||||
Sbjct: 38 atcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 49 acaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||| |||||||||||| |||||| |||||| ||||||||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatattgatgt 36
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| ||||||||| || |||| ||||||||||||||||||| || ||||||||
Sbjct: 119 tttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatctaca 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||||||||||||||| |||| | | ||||| ||| ||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 178 gaggaagta 186
|||||||||
Sbjct: 122 gaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||||||| |||| ||| ||||| ||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 9e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 75 cacattcatattgatgttgataaatctacacatatatatctatctagattcattaa-atc 133
||||||||||| ||||| || |||||| |||||||||| | |||||||||||||| |||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 134 aatatgaatgtg 145
|||||||||||
Sbjct: 33 tatatgaatgtg 22
Score = 60.0 bits (30), Expect = 1e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 73 cccacattcatattgatgttgataaatctacacatatatatctatctagattca-ttaaa 131
||||||||||||| |||||| || |||||| ||| |||||| | |||||||||| ||| |
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 132 tcaatatgaatgtg 145
|| |||||||||||
Sbjct: 80 tctatatgaatgtg 93
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 113/139 (81%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 49 acaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctacacata 108
|||||||||| | || ||| ||| || |||||||| | |||||| || ||| || |||||
Sbjct: 20 acaatgtaagactttttaatattgcctacattcatttagatgttaatgaatatagacata 79
Query: 109 tatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattaca 167
| || | | |||||||||||| ||| ||||| ||||||| ||||| |||| | |||||
Sbjct: 80 tgtacgtgtttagattcattaacatctatatgtatgtgagcaatgctagaaagtcttaca 139
Query: 168 ttatgaaacggaggaagta 186
|| ||||||||||||||||
Sbjct: 140 ttgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatcta 102
|||||||||||||| | ||||| |||| | ||||| ||||| |||||| || ||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaatcta 90
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||||||||||||| || |||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtt 63
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||||| ||| |||||||||| | ||||| ||||||| ||||||||||| |||||
Sbjct: 60 atcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| ||| |||||||||| | ||||| ||| ||| ||||||||||||||||
Sbjct: 67 atcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 48.1 bits (24), Expect = 5e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||||||| || |||||| || ||| |||||||||||
Sbjct: 111 tttcacaatataagtcattttagcatttctcatatttatattgatgtt 64
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacatt 80
||||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattc 81
|||||||||| |||||||||| ||||||||||| ||||| ||| ||||
Sbjct: 4 ctactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 148 aaatgcaagaatgaattacattatgaaacggaggaagtac 187
|||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagtac 117
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacat 79
|||||||||| ||||| |||||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 115 tatctagattcattaaat-caatatgaatgtgagaaatgcaagaatgaattacattatga 173
|||||||||||| ||| | | |||| ||||||||||||| ||||||| ||| |||||||
Sbjct: 77 tatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatattatga 18
Query: 174 aacggaggaagtac 187
|||| |||||||||
Sbjct: 17 aacgaaggaagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 141 atgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||| ||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat 85
||||| ||| ||||||||||||||||||| |||||| ||||
Sbjct: 16 tttcataatataagtcattctaacatttctcacatttatat 56
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 119/146 (81%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||| |||||||| | ||||| |||| |||||||||||| ||||| || |||||| |
Sbjct: 145 tttcataatgtaagactttctagcattgtccacattcatataaatgttaatgaatctaga 86
Query: 105 catatatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaat 163
|| |||| | ||||||||||||| |||||||||||| | | ||||| |||| | |
Sbjct: 85 cacgcatat--acctagattcattaacatcaatatgaatataggcaatgctagaaagtct 28
Query: 164 tacattatgaaacggaggaagtacta 189
|||||||||||||||||| |||||||
Sbjct: 27 tacattatgaaacggagggagtacta 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 125/154 (81%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | ||||| |||| || | |||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| ||||| | |||||||||||||| || ||||||||||| ||||
Sbjct: 65 atgaatctagg--tatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||||||||||||||||||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||| ||||| ||||| | ||||| ||||||| |||||||||||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 176 cggaggaagta 186
| |||| ||||
Sbjct: 122 cagagggagta 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 149 aatgcaagaatgaattacattatgaaacggaggaagta 186
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 56 aagtcattctaacatttcccacattcatattgatg 90
||||||||||| |||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatg 35
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 59 tcattctaacatttcccacattcatattgatg 90
|||||||| |||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatg 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaatt 164
||||||||||||||| ||||||| ||||||||||
Sbjct: 57 atcaatatgaatgtgggaaatgctagaatgaatt 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 131 atcaatatgaatgtgagaaatgcaagaatga 161
||||||||||||||| ||||||| |||||||
Sbjct: 34 atcaatatgaatgtgggaaatgctagaatga 4
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 149 aatgcaagaatgaattacattatgaaacggaggaagtac 187
||||| ||||||| |||||||||||||||||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagtac 137
Score = 54.0 bits (27), Expect = 8e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| ||||||||||||||||| ||| |||| || ||||| ||| ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatt 63
Query: 93 gataaatctacacatatat 111
|| |||||| || |||||
Sbjct: 64 aatgaatctagacttatat 82
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 155 agaatgaattacattatgaaacggaggaagta 186
||||||| ||||||||||||||||||| ||||
Sbjct: 36 agaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 124/154 (80%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | ||||| |||| ||||||||||||| ||| |
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 94 ataaatctacacatatatatctatctagattcatta-aatcaatatgaatgtgagaaatg 152
|| |||||| || | |||| | ||||||||||||| ||| |||| |||||| | || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | |||||||||||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 124/154 (80%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||| ||||| ||||| |||||||| | ||||| | || |||||||| |||| ||| |
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| |||||| |||||||| | | |||||||||||| || ||||||||||| | ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcat 83
||||||||| ||||||||||||||||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 148 aaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccaca 78
|||||||||||||||||||||| ||||| |||||
Sbjct: 97 tttcacaatgtaagtcattctagcattttccaca 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 137 atgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||| | ||||||| | ||||| ||||||| ||||||||||| |||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||||||||||||| || ||||||||||||||||||
Sbjct: 98 tttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| ||||| | | ||||| ||||||| ||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcatt 63
||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||||||||||| | ||||| ||| |||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 94 ataaatctacacatatat 111
|| |||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 44.1 bits (22), Expect = 8e-04
Identities = 122/154 (79%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| |||||| ||||||| | ||||| | | |||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 94 ataaatctacacatatatatctatctagattcattaa-atcaatatgaatgtgagaaatg 152
|| ||| || ||| |||| | |||||||||||||| ||| |||||||| || | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 153 caagaatgaattacattatgaaacggaggaagta 186
| |||| | ||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| ||| ||||||||||| | ||||| |||| | |||||||||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 178 gaggaagtac 187
|||| |||||
Sbjct: 132 gagggagtac 141
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 94 ataaatcta 102
|| ||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
|||||||||||||| | ||||| |||| |||||||||| | |||||| || |||||| |
Sbjct: 16 tttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatctaga 75
Query: 105 catatatat 113
|||||||||
Sbjct: 76 catatatat 84
Score = 48.1 bits (24), Expect = 5e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 108 atatatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattac 166
|||||| | |||||||||||||| ||| | ||||||||| ||||| |||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 167 attatgaaacggaggaagta 186
||| ||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 147 gaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||| ||||||| ||||||| |||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttc 73
|||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 140 aatgtgagaaatgcaagaatgaattacattatgaaacgga 179
|||||||||||||| | ||||| ||| |||||||||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacgga 84
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||| |||||||||| |||||| | ||||| ||| ||| |||||||||||||||||
Sbjct: 82 atcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagtac 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 119 tagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacg 177
|||||||||||| |||||||| || |||||||||| ||||||| ||| ||| |||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 178 gagg 181
||||
Sbjct: 13 gagg 10
Score = 48.1 bits (24), Expect = 5e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttgataaatctaca 104
||||||||| |||||||||||| |||||| || || |||||||| || || ||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatctaca 75
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
||||||||| ||||| |||||||| | ||||| |||| |||||||||||| ||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 94 ataaatcta 102
|||||||||
Sbjct: 65 ataaatcta 73
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 87/104 (83%), Gaps = 7/104 (6%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatct--acacatatatatc----t 115
|||||||||| ||||||||||||| |||||| || ||||| |||||| ||||| |
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatccatat 49
Query: 116 atctagattcattaa-atcaatatgaatgtgagaaatgcaagaa 158
||||||||||||||| ||| ||||||||||| | ||||| ||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| ||||||| |||| | ||||||| || |||| ||||||||||||||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattcta 66
||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 56.0 bits (28), Expect = 2e-07
Identities = 73/87 (83%), Gaps = 7/87 (8%)
Strand = Plus / Plus
Query: 68 catttcccacattcatattgatgttgataaatctacacatatatatctatctagattcat 127
|||||||||||||||||||||||| || |||||| || |||| |||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagac------atctgtctagattcat 58
Query: 128 t-aaatcaatatgaatgtgagaaatgc 153
| | ||||||||||||||| |||||||
Sbjct: 59 tgacatcaatatgaatgtgggaaatgc 85
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 68 catttcccacattcatattgatgt 91
||||||||||||||||||||||||
Sbjct: 84 catttcccacattcatattgatgt 61
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacatt 80
|||||||||||||||||||||| ||||||| |||||
Sbjct: 78 tttcacaatgtaagtcattctagcatttcctacatt 43
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 155 agaatgaattacattatgaaacggaggaagta 186
||||||| ||||||| ||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattcta 66
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcata 84
|||||||||||||||||||||| |||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagtattttccacattcata 55
Score = 54.0 bits (27), Expect = 8e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 136 tatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||| |||| | ||||||| ||||||| ||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||| ||| ||||||| | ||||||| ||| ||| ||||||||||||||||
Sbjct: 88 atatggatgagagaaatcctagaatgacttatattgtgaaacggaggaagta 139
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 30 ttgctactccctctttttcacaatgtaagtcattctaacatttcccacattc 81
|||||||| |||| |||||||||||||||||||||| || || ||||||||
Sbjct: 1 ttgctacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 155 agaatgaattacattatgaaacggaggaagta 186
||||||| ||||||| ||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 cacaatgtaagtcattctaacatttcccacat 79
||||||||||||||||||| ||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 141 atgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||| ||||||| ||||||| ||||||| || |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattcta 66
||||||||| ||||||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattcta 62
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 65 taacatttcccacattcatattgatgttgataaatctacacatatatatcta 116
||||||| ||||||||||||| ||||| || |||||| |||||||||||||
Sbjct: 2 taacattgcccacattcatatatatgttaatgaatctagacatatatatcta 53
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 118 ctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaac 176
||||||||||||| ||| ||||| ||||| | ||||| |||| | ||||||||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 177 ggaggaagtact 188
||||| ||||||
Sbjct: 138 ggagggagtact 149
Score = 54.0 bits (27), Expect = 8e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||| | |||||||||| ||||| |||| | ||||||| |||||
Sbjct: 75 tctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaa 16
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 68 catttcccacattcatattgatgttgataaatctacacatatatatctatctagattcat 127
|||| ||||||||||||| ||||| ||||||||| |||||||||| | | ||||||||
Sbjct: 39 cattgcccacattcatatatatgttaataaatctagacatatatatgtgccaagattcat 98
Query: 128 taa-atcaatatgaatgtgagaaatgcaagaa 158
||| || ||||||||||| | ||||| ||||
Sbjct: 99 taacatatatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 56.0 bits (28), Expect = 2e-07
Identities = 105/128 (82%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 62 ttctaacatttcccacattcatattgatgtt-gataaatctacacatatatatctatcta 120
||||| |||| ||||||||||||| |||||| || |||||| ||| || || ||||||
Sbjct: 33 ttctagcattacccacattcatatagatgttaaattaatctagacacctacatatatcta 92
Query: 121 gattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgga 179
|||||||||| ||| ||||||||||| | ||||| |||| | ||| | | |||||||||
Sbjct: 93 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacgga 152
Query: 180 ggaagtac 187
|| |||||
Sbjct: 153 gggagtac 160
Score = 48.1 bits (24), Expect = 5e-05
Identities = 102/127 (80%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| ||||||||||||| |||||| || |||||| | |||| || | |||||
Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctag 72
Query: 122 attcatt--aaatcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacgga 179
||| ||| | ||| ||||||||||| | ||||| |||| | ||| | |||||||||||
Sbjct: 71 attaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacgga 12
Query: 180 ggaagta 186
|| ||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 54.0 bits (27), Expect = 8e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||| ||||||||| ||| ||||||||||| | ||||| |||| | |||||||||||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 176 cggaggaagta 186
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 54.0 bits (27), Expect = 8e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
||||||||| ||||| |||||||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||| ||||| |||||||| | ||||| |||| ||||||||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||| | ||||| |||| | ||||||||||||||||||| |||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 143
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 54.0 bits (27), Expect = 8e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 51 aatgtaagtcattctaacatttcccacattcatattgatgttgataaatctacacatata 110
|||||||| | |||||||||| ||||||||||||| |||| || |||||| |||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatata 61
Query: 111 tatctatctagattcatta 129
| | | ||||||||||||
Sbjct: 60 tgtgtgcctagattcatta 42
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 8e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
|||||||||| ||||||||||||| |||| || |||||| |||||||||| | | |||
Sbjct: 33 ttctaacattgcccacattcatatatatgtcaatgaatctagacatatatatgtgtttag 92
Query: 122 attcatt 128
|||||||
Sbjct: 93 attcatt 99
Score = 46.1 bits (23), Expect = 2e-04
Identities = 90/111 (81%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 79 ttcatattgatgttgataaatctacacatatatatctatctagattcattaa-atcaata 137
||||||| ||||| || |||||| ||| |||||| | |||||||||||| | || |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 138 tgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtact 188
|||||||| | |||| |||| | ||| | ||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagtact 3
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 8e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||||||||||||| ||| ||||||||||| | ||||| |||| | ||| | |||||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 176 cggaggaagta 186
|||||||||||
Sbjct: 116 cggaggaagta 126
Score = 44.1 bits (22), Expect = 8e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacat 107
||||| |||| ||||||||||||| |||||| || |||||| ||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctagacat 53
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 52.0 bits (26), Expect = 3e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 115 tatctagattcatta-aatcaatatgaatgtgagaaatgcaagaatgaattacattatga 173
||||||||||||||| |||||||| ||| ||| |||||| | ||||| ||||||| |||
Sbjct: 34 tatctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtga 93
Query: 174 aacggaggaagtac 187
|| ||||| |||||
Sbjct: 94 aatggagggagtac 107
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 157 aatgaattacattatgaaacggaggaagta 186
||||| ||||||| ||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgt 91
||||||||| ||||| |||||||| | ||||| |||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||||||||| | ||||| |||| | ||||||||||||||||||| |||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
|||| ||||||||| ||| ||||||||||| | ||||| | || | |||||||||||||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 176 cggaggaagta 186
|||||| ||||
Sbjct: 132 cggagggagta 142
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 129 tttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||||||||| | ||| | ||||||| ||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 134 aatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||||||| ||||| | | ||| | ||||||| ||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatatt 86
||||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||| |||||||||||||| ||||| |||| ||||||||||||| ||||
Sbjct: 121 ctactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatg 64
Score = 44.1 bits (22), Expect = 8e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
|||||||||||||| | ||||| | || ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat 85
||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 119 tttcacaatataagtcattttaacatttttcacattcatat 79
Score = 44.1 bits (22), Expect = 8e-04
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 110 atatctatctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacat 168
|||||| |||||||||||||| || ||| | ||| ||| |||||| | ||||| ||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 169 tatgaaacggaggaagta 186
| ||||||||| ||||||
Sbjct: 22 tgtgaaacggaagaagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 45 tttcacaatgtaagtcattctaacatttcccacattcatat 85
|||||||||||||| | ||||| |||| |||||||||||||
Sbjct: 115 tttcacaatgtaagactttctagcattgcccacattcatat 75
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 146 agaaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||||| ||||||| ||||||||||||||| ||| ||||
Sbjct: 106 agaaatgctagaatgacttacattatgaaacgaagggagta 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 148 aaatgcaagaatgaattacattatgaaacggaggaagta 186
|||||| ||||||| ||| ||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 31 tgctactccctctttttcacaatgtaagtcattctaacatttc 73
||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 149 tgctactcccttcgtttcataatgtaagtcattctagcatttc 107
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 33 ctactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 92
|||||||||| ||||| | | |||| | ||||| |||| ||||||||||||| |||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 93 gataaatctacacatatatat 113
|| |||||| ||||||||||
Sbjct: 73 aatgaatctagacatatatat 53
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 143 gtgagaaatgcaagaatgaattacattatgaaacggaggaagtac 187
||||| ||||| |||| || ||||||||||||||||||| |||||
Sbjct: 40 gtgagcaatgctagaaagacttacattatgaaacggagggagtac 84
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 163 ttacattatgaaacggaggaagta 186
||||||||||||||||||||||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| ||||||||||||| |||||| || |||||| ||||||| | | ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 122 attcattaa 130
|||||||||
Sbjct: 46 attcattaa 38
Score = 44.1 bits (22), Expect = 8e-04
Identities = 80/98 (81%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatatctatctag 121
||||| |||| |||| |||||||| ||||| || |||||| |||| |||| | ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 122 attcattaa-atcaatatgaatgtgagaaatgcaagaa 158
||||||||| ||| ||||||||||| | ||||| ||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatg 90
||||||||| ||||| ||| |||||||||||| ||||| ||| ||| |||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 155 agaatgaattacattatgaaacggaggaagta 186
||||||| ||||||||||||||||||| ||||
Sbjct: 36 agaatgacttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacat 79
||||||||| ||||| |||||||||||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 62 ttctaacatttcccacattcatattgatgttgataaatctacacatatatat 113
||||| |||| ||||||||||||| |||| | || |||||| ||||||||||
Sbjct: 110 ttctatcattgcccacattcatatagatgctaatgaatctagacatatatat 59
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 163 ttacattatgaaacggaggaagta 186
||||||||||||||||||||||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 117 tctagattcattaa-atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaa 175
||||||||| |||| ||| ||||||||||| ||||| |||| | |||||||||||||
Sbjct: 38 tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97
Query: 176 cggagg 181
||||||
Sbjct: 98 cggagg 103
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 131 atcaatatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||| ||| ||| |||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 49 atcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacattt 72
||||||||| ||||||||||||| |||||||| |||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcattt 66
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 163 ttacattatgaaacggaggaagta 186
||||||||||||||||||||||||
Sbjct: 90 ttacattatgaaacggaggaagta 113
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatat 85
|||| ||||| |||||||||||||| | ||||| | || |||||||||||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatat 63
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 163 ttacattatgaaacggaggaagta 186
||||||||||||||||||||||||
Sbjct: 85 ttacattatgaaacggaggaagta 108
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 135 atatgaatgtgagaaatgcaagaatgaattacattatgaaacggaggaagta 186
||||||||||| | ||||| |||| | ||||||||||||| ||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 48.1 bits (24), Expect = 5e-05
Identities = 94/115 (81%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 34 tactccctctttttcacaatgtaagtcattctaacatttcccacattcatattgatgttg 93
|||||||||| ||||| | | |||| | ||||| ||| ||||||||||||| ||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 94 ataaatc--tacacatatatatctatctagattcattaa-atcaatatgaatgtg 145
|| |||| |||||| |||| | | | |||||||||||| ||| |||||||||||
Sbjct: 65 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtg 119
