miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01915;mir-2238;ABKE01009364.1/1-103 54126:Pristionchus pacificus
Length = 103
Score = 157 bits (79), Expect = 4e-38
Identities = 98/104 (94%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 9 ggaactagtctgcctacttcccgtctactcctttcgtcattcgttgatacgaatacgaat 68
|||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 1 ggaactagtctgccgacttcccgtctactcctttcgtcatt----gatacgaattcgaat 56
Query: 69 gacaatcgagtgggtgagaaggaagacttgcttccttggttggt 112
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 gacaatcgagtgggtgagaaggaagacttgcttccttggttggt 100
>RF01915;mir-2238;ABKE01002240.1/9449-9567 54126:Pristionchus
pacificus
Length = 119
Score = 50.1 bits (25), Expect = 6e-06
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 24 acttcccgtctactcctttcgtcattcgttgatacgaatacgaatgacaatcgagtgggt 83
|||||||| ||||||||| | |||||||||| ||||||||||| ||| |||| ||
Sbjct: 28 acttcccgcttactcctttagccattcgttgagttgaatacgaatggcaagggagtttgt 87
Query: 84 gagaaggaagacttgcttccttggttggt 112
| |||| |||||||||||| |||| ||||
Sbjct: 88 gcgaagtaagacttgcttcattggctggt 116
