miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01899;mir-2241;ABKE01012904.1/313-215 54126:Pristionchus
          pacificus
          Length = 99

 Score =  192 bits (97), Expect = 6e-49
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gctactcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3  gctactcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatc 62

                                               
Query: 61 accgggattctcagtggattagggcatcgagtcagct 97
          |||||||||||||||||||||||||||||||||||||
Sbjct: 63 accgggattctcagtggattagggcatcgagtcagct 99




>RF01899;mir-2241;ABKE01003450.1/5005-5103 54126:Pristionchus
          pacificus
          Length = 99

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                     
Query: 29 aatccaggtttcgatcactaattggtgtgatcaccgggattct 71
          ||||| ||||| |||||||| |||  |||||||||||||||||
Sbjct: 31 aatcccggttttgatcactagttgcagtgatcaccgggattct 73