miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00650;mir-153;ABJB010903342.1/3344-3261 6945:Ixodes scapularis
(black-legged tick)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gcaaattgcatagtcacaaaagtgat 81
||||||||||||||||||||||||||
Sbjct: 46 gcaaattgcatagtcacaaaagtgat 71
>RF00650;mir-153;ABQF01010730.1/5361-5446 59729:Taeniopygia
guttata
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgatcg 83
|||||||||||||||||||||||
Sbjct: 52 ttgcatagtcacaaaagtgatcg 74
>RF00650;mir-153;ABRQ01035369.1/2287-2202 9813:Procavia capensis
(cape rock hyrax)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgatc 82
||||||||||||||||||||||
Sbjct: 52 ttgcatagtcacaaaagtgatc 73
>RF00650;mir-153;AAWZ01013157.1/56717-56632 28377:Anolis
carolinensis (green anole)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgatc 82
||||||||||||||||||||||
Sbjct: 52 ttgcatagtcacaaaagtgatc 73
>RF00650;mir-153;BAAE01047906.1/23-109 8090:Oryzias latipes
(Japanese medaka)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgatc 82
||||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgatc 74
