miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00967;mir-281;AAJJ01001668.1/5737-5811 7070:Tribolium castaneum
          (red flour beetle)
          Length = 75

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 actgtcatggagttgctctcttta 82
          ||||||||||||||||||||||||
Sbjct: 44 actgtcatggagttgctctcttta 67




>RF00967;mir-281;AABS01000211.1/21157-21238 7719:Ciona
          intestinalis
          Length = 82

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 58 tactgtcatggagttgctctctt 80
          |||||||||||||||||||||||
Sbjct: 45 tactgtcatggagttgctctctt 67




>RF00967;mir-281;ABEP02022249.1/34089-34173 7739:Branchiostoma
          floridae (Florida lancelet)
          Length = 85

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 actgtcatggagttgctctcttt 81
          |||||||||||||||||||||||
Sbjct: 51 actgtcatggagttgctctcttt 73