miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 143/157 (91%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 98 atgaatctagat--aaatatatatgtatagattcattaacatcaatatgaatatggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| ||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagtac 4
Score = 170 bits (86), Expect = 4e-42
Identities = 140/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||| ||| |||||||| | ||||||||||||||||||||||| ||| || ||
Sbjct: 64 aatgaatct--atacatatatatttatctagattcattaacatcaatatgaatgtgggaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||| ||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 143/157 (91%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| ||||||||||||||||||||||||| |||||| ||| || ||
Sbjct: 64 aatgaatctagatag--atatatatgtctagattcattaacaacaatatgaatgtgggaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|||||| |||||||||||||||||||| |||||||||
Sbjct: 122 atactagaatgacttacattgtgaaacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||| |||| ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||||||||||||| || || ||||
Sbjct: 98 atgaatctag--acatatatatctatctagattcattaacatcaatatggatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| |||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 186 bits (94), Expect = 7e-47
Identities = 142/156 (91%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
||||||||| |||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 98 ataaatctatatagatatatat--gtctagattcattaacatcaatatgaatatgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || |||||||||||||||||||| |||||||||
Sbjct: 40 tgcttgaatgacttacattgtgaaacggagggagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 137/156 (87%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | | |||||| |||||||||||||||||| || |||
Sbjct: 65 atgaatctag--acatatatatctatatagatttattaacatcaatataaatgtg--aaa 120
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 142/157 (90%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 98 atgaatctagatagatat--atatgtctagattcattaacatcaatataaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| | |||||||||||||||||||||| |||| |||||
Sbjct: 40 tgcaaaaatgacttacattgtgaaacggaggaagtac 4
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||||| |||||| |||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||| | |||||||| | |||||||||||||| |||||||| ||| || ||
Sbjct: 64 aatgaatctag--acatatatatctatctagattcattaatatcaatatgaatgtgggaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| ||||||||||||||||| || |||||||||
Sbjct: 122 atgctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 142/157 (90%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatt 100
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| |||||| |||||||| ||||||||||||||||||||| |||||||||| || ||
Sbjct: 99 aatgaatctaaatagatat--atatgtctagattcattaacaccaatataaatgtgggaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | | |||||||||||| |||||||| ||| |||||||
Sbjct: 65 atgaatctag--acatatatatctatttagattcattaatatcaatatgaatgtgaaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| ||||||||| |||||| ||| ||||||||||
Sbjct: 123 tgctagaatgacttatattgtggaacggagggagtac 159
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 142/157 (90%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||||||| ||||||||||||||||||| |||||||| ||| || |||
Sbjct: 98 atgaatctagatagatat--atatgtctagattcattaatatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| || |||||||||||||||||||| ||||||||||
Sbjct: 40 tgttagaatgacttacattgtgaaacggagggagtac 4
Score = 182 bits (92), Expect = 1e-45
Identities = 143/159 (89%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgata 61
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
||||| |||||||| | |||||| ||| ||||||||||||| |||||||| ||| ||||
Sbjct: 62 ttaatgaatctagacatatatatctat--ctagattcattaaaatcaatatgaatgtgaa 119
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| |||||||||||||||||||| |||||||||
Sbjct: 120 aaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 186 bits (94), Expect = 7e-47
Identities = 142/156 (91%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
||||||||| |||||||| |||||||||||||||||||||||||||| |||||| |||
Sbjct: 63 ataaatctatatagatat--atatgtctagattcattaacatcaatatgaatatgggaaa 120
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || |||||||||||||||||||| |||||||||
Sbjct: 121 tgcttgaatgacttacattgtgaaacggagggagta 156
Score = 147 bits (74), Expect = 6e-35
Identities = 137/156 (87%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | | |||||| |||||||||||||||||| || |||
Sbjct: 96 atgaatctag--acatatatatctatatagatttattaacatcaatataaatgtg--aaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 184 bits (93), Expect = 3e-46
Identities = 141/156 (90%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||| ||||||||||||| |||||||||||||||||| ||| || |||
Sbjct: 65 atgaatctagatag--atatatatgtctacattcattaacatcaatatgaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
|| || |||||||||||||||||||| |||| ||||
Sbjct: 123 tattagaatgacttacattgtgaaacggaggaagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| |||| | |||||| ||| |||||||||||||||||||||| ||| || |||
Sbjct: 98 atgaatgtagacatatatatctat--ctagattcattaacatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 141/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| ||||||||||||||||||||||| ||||| || ||| | |||
Sbjct: 64 aatgaatctagatag--atatatatgtctagattcattaatatcaacatgaatttagaaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||||||||||||| ||| ||| |||
Sbjct: 98 atgaatctag--acatatatatctatctagattcattaacatcaatatgaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| || |||||||||||||||||||| || |||||||
Sbjct: 40 tggtagaatgacttacattgtgaaacggaaggagtac 4
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 141/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| |||||||||||||||||||||||||| ||||| ||| || | |
Sbjct: 64 aatgaatctagatag--atatatatgtctagattcattaacattaatatgaatgtggaga 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | |||||||||||||||| ||||| ||| || |||
Sbjct: 98 atgaatctag--acatatatatctatctagattcattaacactaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| |||||||||||||||||||||||| |||| |||||
Sbjct: 40 tgctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| | ||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 65 atgactctagatag--atatatatgtctagattcattagcatcaatatgaatatagaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||| |||||||||| |||||||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | |||||| ||||||||||||||| ||| || ||||
Sbjct: 98 atgaatctag--acatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|||||| ||| | | |||||||||||||||||||||||||||||||| ||| || |||
Sbjct: 65 ataaatttagct--aaatatatatgtctagattcattaacatcaatatgaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||| ||| ||||| || ||||| ||| || ||||
Sbjct: 98 atgaatctag--acatatatatttagctaaatttattaatataaatatgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| |||||||| |||||||||||||||||||||||| ||| ||| || |||
Sbjct: 98 atgaatctaaatagatat--atatgtctagattcattaacatcactatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
Score = 153 bits (77), Expect = 9e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | | |||||||||||| |||||||| ||| || ||||
Sbjct: 65 atgaatctag--acatatatatctatttagattcattaatatcaatatgaatgtggaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || |||||||||||||||||||| |||||||||
Sbjct: 123 tgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 65 atgaatctagatag--atatatatgtctagattcattatcatcaatataaatgtgaaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||| |||| |||||||||| |||||||||
Sbjct: 123 tgctagaatggcttatattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| |||| |||| |||||||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||||||| ||||| ||| || |||
Sbjct: 98 atgaatctag--acatatatatctatctagattcattaacataaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||| |||||||||| |||| ||||
Sbjct: 40 tgctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 140/156 (89%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 98 atgaatctagatagatat--atatgtctagattcattaacatcaatatgaatgtgggtaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctataatgacttacattgtgaaacggagggagta 5
Score = 153 bits (77), Expect = 9e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||||||| ||||| ||| || |||
Sbjct: 65 atgaatctag--acatatatatctatctagattcattaacattaatatgaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||||||||||||| |||||||||| |||| ||||
Sbjct: 123 tgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 140/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| |||||||| ||||||||||||| ||||||||| ||| || ||
Sbjct: 64 aatgaatctagatag--atatatatttctagattcattaccatcaatattaatgtgggaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||||||||||||| |||||||||| |||||||||
Sbjct: 122 attctaaaatgacttagattgtgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||||| ||||||| ||| || |||
Sbjct: 98 atgaatctag--aaatatatatctatctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| |||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 170 bits (86), Expect = 4e-42
Identities = 139/156 (89%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||
Sbjct: 65 atgaatctagataga---atatatatctagattcattaacattaatataaatatgggaaa 121
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || |||||||||||||||||||| |||||||||
Sbjct: 122 tgttagaatgacttacattgtgaaacggagggagta 157
Score = 123 bits (62), Expect = 8e-28
Identities = 133/156 (85%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || ||||| || ||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||| |||| | | ||||||||||||| ||||||||| ||| ||| |||
Sbjct: 97 atgaatctagatatatat---tctatctagattcattaccatcaatatgaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||| ||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 140/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 159 gtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtt 100
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| | |||||||||||||||||| ||||||||||||||| || ||
Sbjct: 99 aatgaatctagatag--aaatatatgtctagattcataaacatcaatataaatgtgggaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| | |||||||||||| ||||||||| |||||||||
Sbjct: 41 atgcaaaaatgacttactttgtgaaacggagggagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | |||| | ||| |||||||||||||||||||||||||| || |||
Sbjct: 65 atgaatctagacatatatttctat--ctagattcattaacatcaatataaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| |||||||||||||| ||||||||| |||| |||||
Sbjct: 123 tgctaaaatgacttactttgtgaaacggaggaagtac 159
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 140/158 (88%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| ||| |||||| ||||||||||||||||||||| |||| ||| ||| |||
Sbjct: 98 atgaatctaaata--tatatagatgtctagattcattaacatctatatgaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtacg 165
| |||||||||||||| |||||||| |||||||||||
Sbjct: 40 tgataaaatgacttacaatgtgaaacggagggagtacg 3
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||| | || ||||||| | ||||||||| |||||| |||| ||| || ||
Sbjct: 64 aatgaatctag--acatctatatatatttagattcatcaacatctatatgaatgtgggaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 139/157 (88%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| |||||||||||||||||||||| ||||||||| ||| || ||
Sbjct: 64 aatgaatctagatag--atatatatgtctagattcattagcatcaatatgaatgtggtaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| || |||||||||||||||||||| |||||||||
Sbjct: 122 atgttagaatgacttacattgtgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||| |||||||| ||| ||| |||
Sbjct: 98 atgaatctag--acatatatatctatctagattcattagtatcaatatgaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| ||||||||| |||||||||| |||| |||||
Sbjct: 40 tgctagaatgacttatattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 161 bits (81), Expect = 4e-39
Identities = 139/156 (89%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||| ||||||||||| ||| ||| ||| ||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||
Sbjct: 64 atgaatctagatagatat--atatgtctagattcattaacatcaatatgaatgtggaaaa 121
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
|| || |||||||||||||||||||| |||||||||
Sbjct: 122 tattagaatgacttacattgtgaaacggagggagta 157
Score = 137 bits (69), Expect = 5e-32
Identities = 136/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | |||||||||||||| |||||||| ||| || |||
Sbjct: 97 atgaatctag--acatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| ||||||||||| |||| |||||||||
Sbjct: 39 -actagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 157 bits (79), Expect = 6e-38
Identities = 138/157 (87%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | ||| |||||| ||||||||||||||||||||| ||| || |||
Sbjct: 65 atgaatctag---cacatacatatgtttagattcattaacatcaatatgaatgtgggaaa 121
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| ||||||||||
Sbjct: 122 tgctagaatgacttacattgtgaaacggagggagtac 158
Score = 151 bits (76), Expect = 4e-36
Identities = 140/159 (88%), Gaps = 3/159 (1%)
Strand = Plus / Minus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 160 tagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 101
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
||||| ||||| | | |||| ||| || |||||||||||||||||||||| ||| ||
Sbjct: 100 ttaatgaatct--aaacatatgtatgtg-ctagattcattaacatcaatatgaatgtggg 44
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||||||||||| ||||||||||||||| |||||||| ||| || |||
Sbjct: 98 atgaatctagatagatatatat--gtctagattcattaatatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| || |||||||||||||||||||| ||||||||||
Sbjct: 40 tgatagaatgacttacattgtgaaacggagggagtac 4
Score = 135 bits (68), Expect = 2e-31
Identities = 137/159 (86%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgata 61
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
||||| ||||||| | |||||||| | ||||||||||||||| |||| ||| |||
Sbjct: 62 ttaatgaatctag--acatatatatctatctagattcattaactaatatatgaatgtgag 119
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| ||||||| || |||||||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||| | ||||| |||||||||||||||||||||| ||||| ||| ||| ||
Sbjct: 64 aatgaatctagttggatat--atatgtctagattcattaacattaatatgaatgtgagaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | |||||| | ||||||||||||||||| |||| |||||| ||
Sbjct: 98 atgaatctagacatatatatccaa--ctagattcattaacatccatatgaatatgggtaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| |||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||||| |||||||||||| |||| |||| ||| || | ||
Sbjct: 98 atgaatctag--acttatatatatgcctagattcattagcatctatatgaatgtggacaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||| ||||||||||||| |||| |||||
Sbjct: 40 tgctagaatgacatacattgtgaaacggaggaagtac 4
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||||||| |||||| ||||||| | ||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||| | |||||||| |||||||||||||||||||||||| ||| || |||
Sbjct: 64 aatgaatctaggca--tatatataagtctagattcattaacatcaatatgaatgtggaaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| ||||| |||||||||||||||||| ||||||||| || ||| |||
Sbjct: 65 atgaatctagacggatat--atatgtctagattcattagcatcaatatggatgtgagaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| |||||||||||||||||||||||| |||||||||
Sbjct: 123 tgctaaaatgacttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| ||||||||||||||| || | ||| ||| || |||
Sbjct: 98 atgaatctag--acatatatatccgtctagattcattaatataagtatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||| |||||||||||||||||||||| ||||||||| ||| || |||
Sbjct: 65 atgaatctagatag--atatatatgtctagattcattaccatcaatatgaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| | ||||||||||||| |||||| || ||||||
Sbjct: 123 tggtggaatgacttacattatgaaacggaaggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||| ||||||||| ||||||||||||| | ||||| |||||||||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | |||||| ||| ||||||||||||||| |||||| ||| || |||
Sbjct: 98 atgaatctagacatatatatctat--ctagattcattaacaacaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 137/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||||||||| || ||||| |||||||||||||||||| ||| | || |
Sbjct: 65 atgaatctagatagatatagat--gtctatattcattaacatcaatatgaatgcggaata 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||| || | |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| ||| | || ||||| | ||||||||||||||||||||||| ||||| |||
Sbjct: 98 atgaatatag--acatctatatctatctagattcattaacatcaatatgaatataggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 151 bits (76), Expect = 4e-36
Identities = 137/157 (87%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||| ||||||| ||||||||||||||||||||||| || ||
Sbjct: 64 aatgaatctagatag----gcatatgtccagattcattaacatcaatataaacgtgggaa 119
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| ||||||||| |||||||||| |||| ||||
Sbjct: 120 atgctagaatgacttatattgtgaaacggaggaagta 156
Score = 111 bits (56), Expect = 3e-24
Identities = 132/157 (84%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| |||||||| ||| || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||| || | || ||| |||||||||||||||||||||| ||| || |||
Sbjct: 96 atgaatctggacatatgcctat----ctagattcattaacatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| ||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 151 bits (76), Expect = 4e-36
Identities = 137/157 (87%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 98
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| |||| |||| ||||||||||||| |||||||||||||||||| ||| | |||
Sbjct: 97 aatgaatc----tagacatatatatgtctacattcattaacatcaatatgaatgtagaaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||| ||| |||| ||||
Sbjct: 41 atgctagaatgacttacattgtggaacggaggaagta 5
Score = 151 bits (76), Expect = 4e-36
Identities = 137/157 (87%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| |||| |||||||||||||||||||||||||||||||| ||| || |||
Sbjct: 65 atgaat----gtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaa 120
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||| ||| ||||||||||
Sbjct: 121 tgctagaatgacttacattgtggaacggagggagtac 157
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 149 bits (75), Expect = 1e-35
Identities = 138/160 (86%), Gaps = 13/160 (8%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| |||||||| | | || || |||||||||||||||||| ||| ||
Sbjct: 88 aatgaatctagaca-acattaat------------attaacatcaatataaatgtgacaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagtacgt 166
||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atactaaaatgacttacattgtgaaacagagggagtacgt 2
Score = 133 bits (67), Expect = 9e-31
Identities = 136/160 (85%), Gaps = 13/160 (8%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||| |||||||||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
|||| | || | ||||||||||||||||||||||||| ||| ||| ||
Sbjct: 64 aata------------ttaatgt-tgtctagattcattaacatcaatatgaatgtgagaa 110
Query: 127 atactaaaatgacttacattgtgaaacagagggagtacgt 166
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 111 atactaaaatgacttacattgtgaaacggagggagtacgt 150
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 137/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| || | |||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||| ||||||||| |||||||||||||| |||||||| ||| || |||
Sbjct: 65 atgaatctagataaatatatata--tctagattcattaatatcaatatgaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| ||||||||| |||||||||| ||||||||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggagggagtac 159
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 100
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||| |||||||| | ||||||||||||||||| ||||| ||| || |||
Sbjct: 99 aatgaatctagat--atatatatttatctagattcattaacattaatatgaatgtggaaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
| || ||||||||| |||||||||| |||| ||||
Sbjct: 41 aagttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 139/157 (88%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcac-attcatattgatgtt 66
|||||||||||||||||||||||||||||| ||| ||||| ||| | |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttt-cactagaaatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||||||||| ||||||||||||||||||| |||||||| ||| || ||
Sbjct: 64 aatgaatctagatagatat--atatgtctagattcattaatatcaatatgaatgtgggaa 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|||||| |||| ||||||||||||||| |||||||||
Sbjct: 122 atactagaatgtcttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||||||||||||| || ||||
Sbjct: 98 atgaatctag--acatatatatctatctagattcattaacatcaatatttctagtgaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| |||||||||||||||||||| |||||||||
Sbjct: 40 tactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 147 bits (74), Expect = 6e-35
Identities = 138/159 (86%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||| ||| ||||||||| |||||||||||||||| |||| ||| |||||||
Sbjct: 65 atgaatc----aagacatatatatgcatagattcattaacatctatatgaatgtgaaaaa 120
Query: 128 tactaaaatgacttacattgtgaaacagagggagtacgt 166
| |||||||||||| |||| |||||| ||||||||||||
Sbjct: 121 tgctaaaatgacttgcattatgaaacggagggagtacgt 159
Score = 143 bits (72), Expect = 9e-34
Identities = 136/157 (86%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| |||| || |||||||||||| |||||||||||||| | || ||| || ||
Sbjct: 97 aatgaatc----tatgcatatatatgtcttgattcattaacatctacatgaatgtgggaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| |||||||||||||||||||||||| |||| ||||
Sbjct: 41 atgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 145 bits (73), Expect = 2e-34
Identities = 138/159 (86%), Gaps = 8/159 (5%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| | | ||||||| ||| |||||||||||| |||||||||| |||||| ||||
Sbjct: 65 atgagtttagatag--atacatatgtctagat------acatcaatatgaatatggaaaa 116
Query: 128 tactaaaatgacttacattgtgaaacagagggagtacgt 166
| ||| |||||||||||||||||||| |||| |||||||
Sbjct: 117 tgctagaatgacttacattgtgaaacggaggaagtacgt 155
Score = 109 bits (55), Expect = 1e-23
Identities = 132/157 (84%), Gaps = 8/157 (5%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt- 95
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
|||||| | |||| ||| | |||| | ||||||||||| |||| ||| || |||
Sbjct: 94 -----atctag--acatatgtatctatctaaactcattaacatcgatatgaatgtggaaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| || ||| ||||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||||||||| ||||||||||||||||| |||| |||| ||| || ||||
Sbjct: 98 atgaatctagatagatat--atatgtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||| ||||||||| || |||| ||
Sbjct: 65 atgaatctag--acatatatatctatctagattcattagcatcaatatggatgtgaacaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
|| || ||||||||||||| |||||| |||||||||
Sbjct: 123 tagtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||| ||||||||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||| | ||||||||||||||||||||| |||| |||| ||| || ||||
Sbjct: 98 atgaatctagat--aaatatatatgtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||||| | ||||||||||||| |||| |||| || |||||||
Sbjct: 65 atgaatctag--acatatatatttatctagattcattagcatcgatatggatgtgaaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| ||||||||||||| |||||| |||||||||
Sbjct: 123 tactagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 145 bits (73), Expect = 2e-34
Identities = 140/161 (86%), Gaps = 6/161 (3%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat----tga 62
||||| ||||||||||||||||||||||||| |||||||| || ||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 63 tgttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatg 122
||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||| ||
Sbjct: 64 tgttaatgaatctagatagatat--atatgtctagattcattaacatcactatgaatgtg 121
Query: 123 aaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||||||||
Sbjct: 122 ggaaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 137 bits (69), Expect = 5e-32
Identities = 139/161 (86%), Gaps = 6/161 (3%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatca----atataaatatga 123
|| ||||||| | |||||||| | ||||||||||||||||||| ||| ||||||
Sbjct: 102 atgaatctag--acatatatatctatctagattcattaacatcactatgtatgaatatgc 45
Query: 124 aaaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| |||||||||||||||||||| |||| |||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 143 bits (72), Expect = 9e-34
Identities = 136/157 (86%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtt 98
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| |||| |||||||||||||||||| |||||||||||| | ||| ||| || ||
Sbjct: 97 aatgaatc----tagatatatatatgtctaaattcattaacatgagtatgaatgtgggaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| | | ||||||||| |||||||||| |||| ||||
Sbjct: 41 atgccagaatgacttatattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 134/157 (85%), Gaps = 4/157 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| | |||||| |||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| |||| |||||||| ||||||||||||||||| | ||| ||| |||||||
Sbjct: 65 atgaat----ttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaa 120
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| ||||||||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggagggagtac 157
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 143 bits (72), Expect = 9e-34
Identities = 135/157 (85%), Gaps = 8/157 (5%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||| |||||| ||| ||||||||||||| ||||||||||||| || |||
Sbjct: 64 aatgaatttagata--------tatctctagattcattagcatcaatataaatgtggaaa 115
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||||||||||||| |||||||||| |||||||||
Sbjct: 116 atgctaaaatgacttatattgtgaaacggagggagta 152
Score = 141 bits (71), Expect = 4e-33
Identities = 136/157 (86%), Gaps = 8/157 (5%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| ||||||| |||| |||||||| ||||||| ||||| ||| |||
Sbjct: 92 atgaatctag--agatata------tctaaattcattagcatcaatgtaaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| |||||||||||||||||||||||| |||| |||||
Sbjct: 40 tgctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 139 bits (70), Expect = 1e-32
Identities = 133/156 (85%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| |||||||||||||||||||||||||| ||| || |||
Sbjct: 89 atgaatctaga-----------atgtctagattcattaacatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||||||||||||||||||||||| ||| || |||
Sbjct: 65 atgaatctagaca-----------ttctagattcattaacatcaatatgaatgtgggaaa 113
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 114 tgctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaata 70
||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 71 aatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaatac 130
||||||| | |||||| |||||||||||||| | ||||||| ||| ||| | || |
Sbjct: 95 aatctag--acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgc 38
Query: 131 taaaatgacttacattgtgaaacagaggga 160
|| |||||||||||||||||||| ||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggga 8
Score = 137 bits (69), Expect = 5e-32
Identities = 130/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaata 70
||||||||||||||||||||||||||| |||||| | ||||||||||||||| | |
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 71 aatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaatac 130
||||||| | ||| ||||||||||||||||||| |||||||||| ||| ||| |||| |
Sbjct: 68 aatctag--acatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgc 125
Query: 131 taaaatgacttacattgtgaaacagaggga 160
|| |||||||||||||||||||| ||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||| |||||| || ||||||||||||| || ||||| ||||||||||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||| |||||| ||||||||||||||||||| | |||| ||| || ||||
Sbjct: 65 atgaatctagata--tatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | || ||||||| |||||||||||||||| | |||| ||| || |||
Sbjct: 98 atgaatctag--acatctatatatatctagattcattaacacctatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || ||||||||||||| || ||| || ||||||
Sbjct: 40 tgttagaatgacttacattatggaacggaaggagta 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 137 bits (69), Expect = 5e-32
Identities = 132/156 (84%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 86 atgaatttagat--------------ctagattcattagcatcaatataaatatgaaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| |||||||||||||||||||| |||||||||
Sbjct: 40 tactagaatgacttacattgtgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 68 ataaatctagat 79
|| |||||||||
Sbjct: 65 atgaatctagat 76
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 133 bits (67), Expect = 9e-31
Identities = 135/157 (85%), Gaps = 8/157 (5%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| | | ||||||| ||| |||||||||||| |||||||||| ||| || ||||
Sbjct: 92 atgagtttagatag--atacatatgtctagat------acatcaatatgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| |||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 119 bits (60), Expect = 1e-26
Identities = 134/158 (84%), Gaps = 8/158 (5%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||||| | |||| ||| | |||| | |||||||||||||||| ||| || ||
Sbjct: 63 ------atctag--acatatgtatctatctaaactcattaacatcaatatgaatgtggaa 114
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 115 aaggctagaatgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 131 bits (66), Expect = 3e-30
Identities = 134/160 (83%), Gaps = 15/160 (9%)
Strand = Plus / Plus
Query: 4 gtagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||| ||| ||||||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 1 gtagaacttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgat 60
Query: 64 gttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatga 123
|||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 61 gttaataaatctag---------------tctagattcattaacatcaatatgaatatgg 105
Query: 124 aaaatactaaaatgacttacattgtgaaacagagggagta 163
||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 106 aaaatgctagaatgacttacattgtgaaacggagggagta 145
Score = 113 bits (57), Expect = 8e-25
Identities = 125/151 (82%), Gaps = 15/151 (9%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| ||||||| |||||||||||||||||| ||| |||
Sbjct: 85 atgaatctaga---------------ctagatttattaacatcaatataaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagg 158
| ||| ||||||||||||| |||||| ||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 131 bits (66), Expect = 3e-30
Identities = 126/149 (84%), Gaps = 14/149 (9%)
Strand = Plus / Plus
Query: 15 tccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaataaatc 74
||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 75 tagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaatactaaa 134
|||| | |||||||||||| ||||||||||||||| ||||| ||| |
Sbjct: 72 taga--------------tgtagattcattaatatcaatataaatatggaaaatgctaga 117
Query: 135 atgacttacattgtgaaacagagggagta 163
||||||||||||||||||| |||||||||
Sbjct: 118 atgacttacattgtgaaacggagggagta 146
Score = 101 bits (51), Expect = 3e-21
Identities = 120/146 (82%), Gaps = 14/146 (9%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| || ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| | ||||||||||||||||||||||| ||| ||| |||
Sbjct: 86 atgaatctaca--------------tctagattcattaacatcaatatgaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaac 153
| ||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 131 bits (66), Expect = 3e-30
Identities = 126/149 (84%), Gaps = 14/149 (9%)
Strand = Plus / Plus
Query: 15 tccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaataaatc 74
||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 75 tagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaatactaaa 134
|||| | |||||||||||| ||||||||||||||| ||||| ||| |
Sbjct: 72 taga--------------tgtagattcattaatatcaatataaatatggaaaatgctata 117
Query: 135 atgacttacattgtgaaacagagggagta 163
||||||||||||||||||| |||||||||
Sbjct: 118 atgacttacattgtgaaacggagggagta 146
Score = 101 bits (51), Expect = 3e-21
Identities = 120/146 (82%), Gaps = 14/146 (9%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| || ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| | ||||||||||||||||||||||| ||| ||| |||
Sbjct: 86 atgaatctaca--------------tctagattcattaacatcaatatgaatgtgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaac 153
| ||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 131 bits (66), Expect = 3e-30
Identities = 134/159 (84%), Gaps = 12/159 (7%)
Strand = Plus / Minus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
|||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 151 tagtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 92
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
||||| | |||||||||||||||||||||||||| ||||||||| ||
Sbjct: 91 ttaatga------------atatatatgtctagattcattaacattaatataaatgtggg 44
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/157 (81%), Gaps = 12/157 (7%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | |||| |||||||||||||||||| ||| || |||
Sbjct: 65 atgaatctagacatatat------------attcattaacatcaatatgaatgtgggaaa 112
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| | ||||||||
Sbjct: 113 tgctagaatgacttacattgtgaaacggggggagtac 149
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| | | | |||||||| || ||||||||||| |||| |||| ||||| ||||
Sbjct: 98 atgaattt--aaacatatatatgcgtatagattcattagcatctatatgaatatagaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || |||||||||||||||||||| |||||||||
Sbjct: 40 tgttagaatgacttacattgtgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || |||||| | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| || |||||||||| || |||||||| |||| |||| ||| || ||||
Sbjct: 65 atgaatcta--tacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||| ||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
| |||||| || | |||||||||||||||||| ||||||| | | ||| |||||||
Sbjct: 65 gtgaatctaagta--tgtatatatgtctagattcactaacatccaagtgaatgtgaaaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| ||||||||||||||||
Sbjct: 123 tgctacaatgacttacattatgaaacagagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||| |||||| ||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
| ||||||| | ||||||| || |||||||| ||||||| |||| ||||||| |||
Sbjct: 98 gtgaatctag--acatatatacatacttagattcactaacatctatatcaatatgagaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 129 bits (65), Expect = 1e-29
Identities = 101/112 (90%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 30 aagtcattttagcatttttcacattcatattgatgttaataaatctagatagatatatat 89
|||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatag--atatat 58
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
|||||||||||||||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 59 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 105 bits (53), Expect = 2e-22
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 30 aagtcattttagcatttttcacattcatattgatgttaataaatctagatagatatatat 89
|||||||| |||||||| ||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctag--acatatatat 53
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
| ||||||||||||||||||||||| ||| ||| |||| ||| ||||||||
Sbjct: 52 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||||| | |||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||| |||| | |||||||||||||||||||||| |||| ||||| ||
Sbjct: 98 atgaatctagat--atatgtctatgtctagattcattaacatctatatgaatataggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | ||| | |||| |||||||||||||||||| |||| ||| ||| |
Sbjct: 65 atgaatctag--acatagacatatatctagattcattaacatccatatgaatgtgagcat 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 127 bits (64), Expect = 5e-29
Identities = 133/157 (84%), Gaps = 8/157 (5%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||| |||||||||||||||||||| ||||||||| ||| | ||
Sbjct: 64 aatgaatctag--------atatatgtctagattcattagcatcaatatgaatgtaggaa 115
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| ||||||||| |||||||||| |||||||||
Sbjct: 116 atgctagaatgacttatattgtgaaacggagggagta 152
Score = 111 bits (56), Expect = 3e-24
Identities = 131/157 (83%), Gaps = 8/157 (5%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||| ||||||||||||| ||||||||| ||| || |||
Sbjct: 92 atgaatctag--------acatatatctagattcattagcatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| |||||||||||||||||||| |||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 125 bits (63), Expect = 2e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 68 ataaatctagatagatata 86
|| ||||||||||||||||
Sbjct: 70 atgaatctagatagatata 52
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 153 cagagggagta 163
| |||| ||||
Sbjct: 120 cggaggaagta 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
|||||||| || |||||||||||||||||||||||| |||| ||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagtac 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||||||||||||| ||||||||||||||||||| |||| |||||| ||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 123 bits (62), Expect = 8e-28
Identities = 132/157 (84%), Gaps = 15/157 (9%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgat 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
| ||||||| ||| ||||||| |||||||||||||||||||||| ||
Sbjct: 64 a---------gatagatctat------ctagatttattaacatcaatataaatatgagaa 108
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| ||| |||||||||||||||||||| |||||||||
Sbjct: 109 atgctagaatgacttacattgtgaaacggagggagta 145
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 68 ataaatctagatagat 83
||||||||||||||||
Sbjct: 85 ataaatctagatagat 70
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 123 bits (62), Expect = 8e-28
Identities = 135/158 (85%), Gaps = 11/158 (6%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||| |||| ||||||||||||||||| || |||||||| |||||| |||||
Sbjct: 3 agtacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgt 55
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||| ||||||||||||||| |||||||||||||||||||||||||| |||||| |
Sbjct: 56 taatgaatctagatagatat----atgtctagattcattaacatcaatatgaatatggga 111
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| ||||||||||||| |||||||||| |||||||||
Sbjct: 112 aatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 113 bits (57), Expect = 8e-25
Identities = 94/106 (88%), Gaps = 4/106 (3%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaat 113
|| |||| |||| |||||| | |||||||||||||||||||||
Sbjct: 89 atgaatc----tagacatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 121 bits (61), Expect = 3e-27
Identities = 130/156 (83%), Gaps = 14/156 (8%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| |||| |||||||| ||||||||||||| | ||||
Sbjct: 65 atgaatctaga--------------tctaaattcattagcatcaatataaatgtagaaaa 110
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||||||||| |||||||||||||| |||||||||
Sbjct: 111 tgctaaaatgatttacattgtgaaacggagggagta 146
Score = 105 bits (53), Expect = 2e-22
Identities = 128/156 (82%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| |||| ||||||||||||| ||||||||| ||| |||||||
Sbjct: 86 atgaatttaga--------------tctagattcattagcatcaatatgaatgtgaaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||| |||||||||||||||| |||||||||
Sbjct: 40 tgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||| |||| | ||||||||| ||| ||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| ||||||||||||||| || ||||||||||| ||||||||| ||||||| |||
Sbjct: 65 atgaatttagatagatatatat--gtttagattcattagcatcaatatgaatatgagaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || ||||||||| |||||| ||| |||||||||
Sbjct: 123 tgttagaatgacttatattgtggaacggagggagta 158
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||| |||||| ||||||||| || ||||| ||| ||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||| | | |||||||| | |||| |||||||| ||||||||| |||||| ||||
Sbjct: 98 atgaatct--aaacatatatatctatctaaattcattagcatcaatatgaatatggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| ||||||||| | |||| ||| |||| ||||
Sbjct: 40 tactagaatgacttatactgtggaacggaggaagta 5
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||||| | |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||| |||| | ||| |||||||||||||||||| |||| ||||| ||
Sbjct: 65 atgaatctagat--atatgtctatatctagattcattaacatctatatgaatataggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||| ||| | |||| |||||||||||||||||| |||| ||| ||| |
Sbjct: 98 atgaatctagat--atagacatatatctagattcattaacatccatatgaatgtgagcat 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 121 bits (61), Expect = 3e-27
Identities = 134/160 (83%), Gaps = 15/160 (9%)
Strand = Plus / Minus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||
Sbjct: 148 tagtacttcctccgttttacaatgtaagtcattctagcatttcccacattcata------ 95
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
|||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 94 -------atctagatagatatatat--gtctagattcattaacatcaatatgaatatgag 44
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| ||||||||||||| |||||| ||||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagtac 4
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtt 63
Query: 67 aataaatctagatagatatat 87
||| |||||||| | ||||||
Sbjct: 64 aatgaatctagacatatatat 84
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 119 bits (60), Expect = 1e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgt 62
Query: 66 taat 69
||||
Sbjct: 63 taat 66
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Query: 67 a 67
|
Sbjct: 69 a 69
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 100 tcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggg 159
|||||||||||||||| ||| || ||||| |||||||||||||||||||||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 160 agtac 164
|||||
Sbjct: 8 agtac 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 104 taacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||||| ||| || ||||| ||||||| | |||||||||||||| |||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Query: 164 c 164
|
Sbjct: 129 c 129
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 117 bits (59), Expect = 5e-26
Identities = 131/156 (83%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| || ||||||||||||||| |||||||||| ||| || |||
Sbjct: 92 atgaatctagacag--------atgtctagattcattgacatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| || |||||||||||||||||||| |||| ||||
Sbjct: 40 tgatagaatgacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 130/156 (83%), Gaps = 8/156 (5%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | || |||||||||||||| |||||||||| ||| || |||
Sbjct: 65 atgaatctag--------acatctgtctagattcattgacatcaatatgaatgtgggaaa 116
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 117 tgctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||| || ||||| ||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 153 cagagggagta 163
| |||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 117 bits (59), Expect = 5e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatat 62
Query: 66 taataaatctagata 80
|||| ||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
|||||||||||||| |||||||| ||| ||| |||| ||| |||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 153 cagagggagtac 164
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 85
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 133/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | |||||| ||| | ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||| ||||| ||||| |||||||||||| |||| |||||| ||
Sbjct: 98 atgaatctag--acatatgtatatatctaggttcattaacatctatatgaatatgggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
||||| || | |||| ||| |||||| ||||||||||
Sbjct: 40 tactagaaagtcttatattatgaaacggagggagtac 4
Score = 109 bits (55), Expect = 1e-23
Identities = 133/158 (84%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||| ||| |||| | || ||| ||| || |||||||| |||||
Sbjct: 3 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 62
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||| || ||||||| |||| ||||||||||||||||||||||| |||| ||| || |
Sbjct: 63 taatgaacctagata--tatacatatgtctagattcattaacatctatatgaatgtggac 120
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| |||||| | ||||||||||||||| |||||||||
Sbjct: 121 aatcctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 133/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | |||||| ||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||| ||||| ||||| |||||||||||| |||| |||||| ||
Sbjct: 65 atgaatctag--acatatgtatatatctaggttcattaacatctatatgaatatgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
||||| || | |||| ||| |||||| ||||||||||
Sbjct: 123 tactagaaagtcttatattatgaaacggagggagtac 159
Score = 109 bits (55), Expect = 1e-23
Identities = 133/158 (84%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||| ||| |||| | || ||| ||| || |||||||| |||||
Sbjct: 160 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 101
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||| || ||||||| |||| ||||||||||||||||||||||| |||| ||| || |
Sbjct: 100 taatgaacctagata--tatacatatgtctagattcattaacatctatatgaatgtggac 43
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| |||||| | ||||||||||||||| |||||||||
Sbjct: 42 aatcctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 68 ataaatctagatagatat 85
|| |||||||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||| || |||| || |||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 153 cagagggagta 163
| |||||||||
Sbjct: 126 cggagggagta 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
|||||||| |||||| |||| ||| |||||||||||||||||||| |||| |||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 147 gtgaaacagagggagta 163
||||||| |||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 107 catcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| ||| || ||||| ||||||||||||| |||||||||| |||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| |||||| || || | |||||||||||||||||||| |||| |||||| ||
Sbjct: 65 atgaatttagata--tagatgtgtgtctagattcattaacatctatatgaatatgggtaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||||||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | | || |||| |||| ||||||||||||| |||| || || ||
Sbjct: 98 atgaatctagacacacatctata--tctaaattcattaacatctatatgtatgtgggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 8e-25
Identities = 129/156 (82%), Gaps = 14/156 (8%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||| ||||||||| ||||||||||||||||| ||| || |||
Sbjct: 65 atgaatc--------------tatgtctagtttcattaacatcaatatgaatgtgggaaa 110
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 111 tgctagaatgacttacattgtgaaaccgagggagta 146
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/156 (81%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| || ||||| | ||||||||||||||||||||| ||| || ||||
Sbjct: 86 atgaaactagaca--------------tagattcattaacatcaatatgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 ataaatctagata 80
|| |||||||||
Sbjct: 65 atgtatctagata 77
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/156 (81%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||| || |||||| ||||||||||||||| ||| || ||||
Sbjct: 86 atgtatctatat--------------ctagatacattaacatcaatatgaatgtggaaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 68 ataaatctagatagata 84
||||||||| |||||||
Sbjct: 79 ataaatctatatagata 63
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
|||||| |||||||||||||||| | || ||||| ||| ||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 155 gagggagta 163
|||||||||
Sbjct: 131 gagggagta 139
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | ||||| |||| |||||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||||| |||||| | |||||||||||||||||||| |||| ||| ||| ||
Sbjct: 98 atgaatctagat--atatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| | | ||||||||||||||| |||||||||
Sbjct: 40 tgctaggaagtcttacattgtgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | | ||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | | ||||||| |||||||||||||||||| || | ||| || ||
Sbjct: 65 atgaatctagacacacatatata--tctagattcattaacatctatgtgaatgtgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||||| | ||||||||||||||| |||||||||
Sbjct: 123 tgttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 113 bits (57), Expect = 8e-25
Identities = 99/112 (88%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 30 aagtcattttagcatttttcacattcatattgatgttaataaatctagatagatatatat 89
|||||||| |||||||| ||||||||||||||||||||| |||||| |||||||| ||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatat--at 53
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
|||||||||||||||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 52 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 30 aagtcattttagcatttttcacattcatattgatgttaataaatctagatagatatatat 89
|||||||| |||||||| ||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctag--acatatatat 58
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
| | ||||||||||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 59 ctatttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||| | || ||||||| ||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | | ||||||||||||||||||||||||||| |||| ||| || ||
Sbjct: 98 atgaatctag--acacatatatatgtctagattcattaacatctatatgaatgtgggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| || |||||||||| |||||| |||| ||||
Sbjct: 40 tactagaaagacttacattatgaaacggaggaagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||||| || ||| ||| ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||||||| |||||||||||||||||||| |||| ||||||| ||
Sbjct: 65 atgaatctagaca--tatatatgtgtctagattcattaacatctatatgaatatgagcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| || | |||||||| |||||| |||||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||
Sbjct: 130 tagtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatg 71
Query: 65 ttaataaatctagatag 81
||||| |||||||||||
Sbjct: 70 ttaatgaatctagatag 54
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||| ||| |||| ||| ||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 153 cagagggagtac 164
| |||| |||||
Sbjct: 117 cggaggaagtac 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcattt 46
|||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| |||||||||||||||||||| |||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||| | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
| |||||| |||||||| ||||||||||||||| |||| || |||| ||| || |||
Sbjct: 65 gtgaatctatatagatat--atatgtctagattcactaacctccatatgaatgtgggaaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagt 162
| ||| ||||||||||||| |||||| ||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggagggagt 157
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 actccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaa 68
||||||||||||||| ||||||||||||| |||||||| ||||||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 69 taaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaat 128
| ||||||| | |||||||| | | |||||||| |||| || |||| ||||| ||||
Sbjct: 97 tgaatctag--acatatatatctatatagattcactaacctctatatgaatataggaaat 40
Query: 129 actaaaatgacttacattgtgaaacagagggagta 163
||| ||||||||||||| |||||| |||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 61
Query: 65 ttaataaatctagat 79
||||| |||||||||
Sbjct: 62 ttaatgaatctagat 76
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 153 cagagggagtac 164
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 68 ataaatctagat 79
|| |||||||||
Sbjct: 80 atgaatctagat 69
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgt 62
Query: 66 taataaatctagata 80
|||| ||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 153 cagagggagtac 164
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| || |||| ||||||||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 68 ata 70
|||
Sbjct: 78 ata 76
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 142 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 83
Query: 65 ttaataaatctaga 78
||||| ||||||||
Sbjct: 82 ttaatgaatctaga 69
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 91 tgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtga 150
||||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 151 aacagagggagtac 164
||| ||||||||||
Sbjct: 127 aacggagggagtac 140
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 82
Query: 67 aataaatcta 76
||| ||||||
Sbjct: 81 aatgaatcta 72
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 88 atatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattg 147
|||||| ||||||||||||||||||||| ||| || ||||| ||| ||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 148 tgaaacagagggagtac 164
|||||| ||||||||||
Sbjct: 125 tgaaacggagggagtac 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 67 aata 70
||||
Sbjct: 64 aata 67
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 68 ataaatctagatagatat 85
|||||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
|||| ||| ||||| |||||||||||| || ||||| ||| |||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 153 cagagggagta 163
| |||||||||
Sbjct: 15 cggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 61
Query: 65 ttaataaatctaga 78
||||| ||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 91 tgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtga 150
||||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 151 aacagagggagtac 164
||| ||||||||||
Sbjct: 17 aacggagggagtac 4
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 68 ataaatctagatagatat 85
|| |||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
|||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 153 cagagggagta 163
| |||| ||||
Sbjct: 120 cggaggaagta 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| ||| |||||||| ||||||||||||||| |||| ||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagtac 4
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 68 ataaat 73
||||||
Sbjct: 65 ataaat 70
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 89 tatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgt 148
||||| || ||| |||||||||||||| ||| || |||||||||||||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 149 gaaacagagggagta 163
||||| |||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcatt 37
||||||||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 aatgacttacattgtgaaacagagggagta 163
|||| ||||||||||||||| |||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 132/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||| | || ||||||| ||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||||| | |||||||||||||||||||| |||| ||| ||| ||
Sbjct: 98 atgaatctagaaa--tatatgtgtgtctagattcattaacatctatatgaatgtgaggaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| |||||| | |||||||| |||||| ||||||||||
Sbjct: 40 tgctaaaaagtcttacattatgaaacggagggagtac 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/109 (87%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| |||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatat 115
||| ||||||| | | | |||||| |||||||||||||||||| ||||
Sbjct: 64 aatgaatctag--acacacatatatttctagattcattaacatctatat 110
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 132/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||| | || ||||||| ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||||| | |||||||||||||||||||| |||| ||| ||| ||
Sbjct: 65 atgaatctagaaa--tatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| |||||| | |||||||| |||||| ||||||||||
Sbjct: 123 tgctaaaaagtcttacattatgaaacggagggagtac 159
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/109 (87%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| |||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 159 gtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtt 100
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatat 115
||| ||||||| | | | |||||| |||||||||||||||||| ||||
Sbjct: 99 aatgaatctag--acacacatatatttctagattcattaacatctatat 53
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 68 ataaatctagatagatat 85
|| |||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||| |||||||| || |||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 153 cagagggagta 163
| |||| ||||
Sbjct: 120 cggaggaagta 130
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 130/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| | || | ||| ||||||||||||||||| ||| ||| |||
Sbjct: 65 atgaatctatgt-gaca----------tagtttcattaacatcaatatgaatgtgagaaa 113
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| |||||||||||||||||||| |||||||||
Sbjct: 114 tgctagaatgacttacattgtgaaaccgagggagta 149
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 68 at 69
||
Sbjct: 89 at 88
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 68 ataaatctagata 80
|| |||| |||||
Sbjct: 74 atgaatcaagata 62
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 3 agtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 97 gattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacaga 156
||||||||||||||||||| ||| || |||| |||||||||||||||||||||||| ||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 157 gggagta 163
|| ||||
Sbjct: 128 ggaagta 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
|||||||||| ||| || ||||| | |||||||||||||||||||||| || |||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagtac 4
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtt 83
Query: 67 aataaatc 74
||| ||||
Sbjct: 82 aatgaatc 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 ataaatc 74
|| ||||
Sbjct: 65 atgaatc 71
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 97 gattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacaga 156
||||||||||||||||||| ||| ||| |||| ||| ||||| |||||||||||||| ||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 157 gggagtac 164
||||||||
Sbjct: 135 gggagtac 142
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 103 bits (52), Expect = 8e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||| ||| ||||||||| |||| | |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 67 aataaatctagatagatata 86
||| |||||| |||||||||
Sbjct: 64 aatgaatctatatagatata 83
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
||||||||||||||||||||||| | || ||||| ||| ||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 155 gagggagtac 164
||||||||||
Sbjct: 13 gagggagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcat 36
|||||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 135 atgacttacattgtgaaacagagggagta 163
||||||||||||||||||| |||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 68 ataaatctagat 79
|| |||||||||
Sbjct: 65 atgaatctagat 76
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/157 (80%), Gaps = 14/157 (8%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||| |||||| ||||||||| |||||||| | |||||||||||||||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||| |||||||||||||||||||||| ||| || ||
Sbjct: 87 aatgaatctagat--------------ctagattcattaacatcaatatgaatgtgggaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| |||||||||||||||| |||||| |||||||||
Sbjct: 41 atggtaaaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 133/159 (83%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||
Sbjct: 161 tagtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatg 102
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
|||| ||||| | | |||| | ||| |||||||||||||||||| |||| |||||
Sbjct: 101 gtaatgaatct--aaacatatgtctatatctagattcattaacatctatatgcatatggg 44
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 43 taaggctagaatgacttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| |||| || || || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||| || | |||||| ||||||||||| |||| |||| ||| || ||
Sbjct: 65 atgaatctagata--tagacatatgtttagattcattaccatctatatgaatgtgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||||||||||||||||| |||||| ||||||||||
Sbjct: 123 tgctaaaatgacttacattatgaaacggagggagtac 159
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 67 aataaatctaga 78
||| ||||||||
Sbjct: 64 aatgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
||||||||||||||||||||||||||||| ||| || |||| ||| |||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 147 gtgaaacagagggagtac 164
||||||| |||| |||||
Sbjct: 21 gtgaaacggaggaagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagt 33
||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 acttacattgtgaaacagagggagta 163
|||||||||||||||| |||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 4 gtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 67 aataaatctaga 78
||| ||||||||
Sbjct: 64 aatgaatctaga 75
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 85 tatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttaca 144
||||||||||||||||||||||||||||||| ||| || |||| ||| |||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 145 ttgtgaaacagagggagtac 164
||||||||| |||| |||||
Sbjct: 23 ttgtgaaacggaggtagtac 4
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 68 ataaatctagat 79
|| |||||||||
Sbjct: 86 atgaatctagat 75
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/157 (80%), Gaps = 14/157 (8%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||| |||||| ||||||||| |||||||| | |||||||||||||||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||||||||| |||||||||||||||||||||| ||| || ||
Sbjct: 64 aatgaatctagat--------------ctagattcattaacatcaatatgaatgtgggaa 109
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| |||||||||||||||| |||||| |||||||||
Sbjct: 110 atggtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 103 bits (52), Expect = 8e-22
Identities = 128/157 (81%), Gaps = 16/157 (10%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|||||||| |||||||| |||||||||| ||| ||| || |||
Sbjct: 65 ----------------atatatatatctagatttattaacatcactatgaatgtgggaaa 108
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
||||| ||||||||||||| |||||||||||||||||
Sbjct: 109 tactagaatgacttacattatgaaacagagggagtac 145
Score = 97.6 bits (49), Expect = 5e-20
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||| |||||| ||||||||||||| ||| |||| |||||||||| |||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 67 aataaatctagatagatatat 87
|||||||||||||| ||||||
Sbjct: 85 aataaatctagatatatatat 65
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgtca 64
Query: 68 ata 70
|||
Sbjct: 65 ata 67
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattga 62
|||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 109 tcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||| ||| |||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 132/158 (83%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||
Sbjct: 3 agtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgt 62
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||| |||||||| | | || |||| |||| ||||||||||||| ||||| || ||
Sbjct: 63 taatgaatctagacacacatctata--tctaaattcattaacatctatatatatgtgggc 120
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggaggaagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||||||| ||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||| ||||| ||| || | |||||||||||||||||||| |||| ||| | ||
Sbjct: 98 atgaatttagat--atagatgtgtgtctagattcattaacatctatatgaatgttggtaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| ||||||||||||| |||||| ||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagtac 4
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 68 ataaatctaga 78
|||||||||||
Sbjct: 84 ataaatctaga 74
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 4 gtagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||
Sbjct: 1 gtagtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgat 60
Query: 64 gtt 66
|||
Sbjct: 61 gtt 63
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| |||||| | |||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 72 atgaatcta 64
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 105 aacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||||| ||| || ||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtg 149
|||| ||||||||||||||||||||| ||| || | || ||| ||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 150 aaacagagggagta 163
|||| |||| ||||
Sbjct: 119 aaacggaggaagta 132
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 82 atatatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
|||||||| | ||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 86 atatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgactt 27
Query: 142 acattgtgaaacagagggagtac 164
| |||||||||| |||| |||||
Sbjct: 26 atattgtgaaacggaggaagtac 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||| ||||||||| ||| |||| ||| ||| ||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgat 63
Query: 67 aataaatctagatagatatatat 89
||| |||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatat 86
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcattt 46
||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 129 gtactccctccgtttcataatgtaagtcattgtagcattt 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| ||||||||||||| |||||| ||||||||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagggagtac 129
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 68 ataaatctaga 78
|||||||||||
Sbjct: 76 ataaatctaga 66
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 85 tatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttaca 144
|||| ||||||||||| |||||||||||||| |||||| |||| |||||||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 145 ttgtgaaacagagggagta 163
||||||||| |||| ||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattca 56
||||| ||||||||||||||||||||| ||| ||| |||| ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||||||| ||| |||||||||||||||| |||| |||||
Sbjct: 43 aaatactagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 153 cagagggagtacgt 166
||||||||||||
Sbjct: 96 tggagggagtacgt 109
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||| |
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatact 48
Query: 67 aataaatctagata 80
||| ||||||||||
Sbjct: 47 aatgaatctagata 34
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcatt 37
|||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 103 ttaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagt 162
||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 163 ac 164
||
Sbjct: 5 ac 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtt 63
Query: 67 aa 68
||
Sbjct: 64 aa 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 68 a 68
|
Sbjct: 62 a 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 103 ttaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagt 162
||||||||||||||||||||| |||| ||||||||||||| |||||||||| |||| |||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 163 a 163
|
Sbjct: 122 a 122
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtt 79
Query: 67 aataaa 72
||||||
Sbjct: 78 aataaa 73
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 68 ataaatct 75
|| |||||
Sbjct: 65 atgaatct 72
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 96 agattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacag 155
|||||||||| ||||||||| ||| || |||| ||| |||||||||||||||||||| |
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 156 agggagta 163
||| ||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 102 attaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggag 161
|||||||||||||| ||| || |||| ||| |||||||||| ||||||||| |||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 162 tac 164
|||
Sbjct: 136 tac 138
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 68 ataaatctag 77
|| |||||||
Sbjct: 65 atgaatctag 74
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcat-tttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 67 aat 69
|||
Sbjct: 83 aat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 94 ctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaac 153
|||||||||||| ||||||||| ||| || |||| ||||||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 154 agagggagta 163
|||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||| |||||||||| | || |||||| |||||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 68 ataaatctagatagatat 85
|| |||||||||| ||||
Sbjct: 70 atgaatctagatatatat 53
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacat 145
|||||| ||||||||||||||||||||||| ||| || ||||| || | ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 146 tgtgaaacagagggagta 163
||||||| |||||||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||||||||||||||||||| |||||| |||||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||||||| |||| ||||| |||||| ||||||||||| |||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || ||| ||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||| |||||| ||||||||||||| |||| |||||| |
Sbjct: 98 atgaatctag--acatatatgcgtgtctaaattcattaacatctatatgaatatgggcag 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
||||| || | ||||||||||||||| ||||||||||
Sbjct: 40 tactagaaagtcttacattgtgaaacggagggagtac 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||||||||||||||| | || ||| | | || |||||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| ||| |||| | |||| ||||||||||||||||||||| |||| ||| || |
Sbjct: 64 aatgaatttagacacgcatat--atgtctagattcattaacatctatatgaatgtgggca 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|||||| || | ||||||||||||||| |||||||||
Sbjct: 122 atactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 68 ataaatctag 77
|| |||||||
Sbjct: 71 atgaatctag 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 94 ctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaac 153
|||||||||||| ||||||||| || |||||||| || ||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 154 agagggagta 163
|||||||||
Sbjct: 122 ggagggagta 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||||||||||||||| ||||||||| || ||||| ||| ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 68 ataaatctag 77
|| |||||||
Sbjct: 83 atgaatctag 74
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcat-tttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 67 aat 69
|||
Sbjct: 65 aat 67
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 94 ctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaac 153
|||||||||||| ||||||||| ||| || |||| ||||||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 154 agagggagta 163
|||| ||||
Sbjct: 134 ggaggaagta 143
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 68 ataaatctagatagatat 85
|||||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
|||| ||| ||||| |||||||||||| || |||| ||| |||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 153 cagagggagta 163
| |||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtt 82
Query: 67 aataaatcta 76
||| ||||||
Sbjct: 81 aatgaatcta 72
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 67 aata 70
||||
Sbjct: 64 aata 67
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 88 atatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattg 147
|||||| ||||||||||||||||||||| ||| || |||| ||| ||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 148 tgaaacagagggagtac 164
|||||| ||||||||||
Sbjct: 125 tgaaacggagggagtac 141
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 68 ataaatctagata 80
|| ||||||||||
Sbjct: 63 atgaatctagata 51
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||| | |||| ||| ||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 153 cagagggagta 163
| |||||||||
Sbjct: 113 cggagggagta 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttt 47
|||| ||||||||||||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 117 aatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||| ||||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
|||||||||||||||| |||| ||| || |||| ||| ||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 155 gagggagta 163
|||||||||
Sbjct: 13 gagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||||||||
Sbjct: 86 aaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
||||||||||||||||||||| ||| || |||| ||| |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 155 gagggagta 163
|||||||||
Sbjct: 122 gagggagta 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 68 ata 70
|||
Sbjct: 61 ata 63
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 102 attaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggag 161
|||||||||||||| ||| || ||||| ||| ||||||||| ||||||||||||||| ||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 162 ta 163
||
Sbjct: 2 ta 1
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 68 ataaatctagata 80
|| ||||||||||
Sbjct: 75 atgaatctagata 63
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||||||||| ||| || |||| || ||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 153 cagagggagta 163
| |||||||||
Sbjct: 125 cggagggagta 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 104 taacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||||| ||| || ||||| ||| ||||||||| |||||||||| |||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 138 gtacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtt 79
Query: 67 a 67
|
Sbjct: 78 a 78
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
|||||||||||| |||||||| |||||| |||| ||| ||||||||| ||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 155 gaggga 160
||||||
Sbjct: 13 gaggga 8
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaata 70
||||||||||||||||| ||||||||| |||||||| ||| || |||||||| |||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 71 aatcta 76
||||||
Sbjct: 68 aatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 104 taacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| || ||| |||||||| ||||||||||||| |||||||||| |||| ||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Query: 164 c 164
|
Sbjct: 138 c 138
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 155 gagggagta 163
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||| ||| || ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaata 70
||||||||||||||||||||||||||| |||||||| ||||||||||||| |||| |||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 71 aatctaga 78
||||||||
Sbjct: 75 aatctaga 68
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
|||||||||||||||||| |||| ||||| ||| ||| |||| ||| |||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 147 gtgaaacagaggga 160
||||||| ||||||
Sbjct: 122 gtgaaacggaggga 135
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggga 160
|||||||||| ||| ||| |||| ||| |||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacat 145
|||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 146 tgtgaaac 153
||||||||
Sbjct: 22 tgtgaaac 15
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 15 tccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaataaatc 74
||||||||||||| |||||||||||||||||||||| ||| | ||| |||||||| ||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 75 tagatagatat 85
|||| ||||||
Sbjct: 72 tagacagatat 82
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 12 ccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaacagaggg 159
|||| ||| |||||||| |||||||||||| |||||||||| |||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| ||| |||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||||||||||| |||||||| |||| ||||||||| ||| || |||
Sbjct: 65 atgaatctagatagatata-----gtctagatccattggcatcaatatgaatgtgggaaa 119
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| | ||||||||||||| |||||| |||||||||
Sbjct: 120 tggtggaatgacttacattatgaaacggagggagta 155
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| | ||||| |||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| ||||| | ||||||||||||| |||||||| ||| || |||
Sbjct: 95 atggatctaga-----ctatatctatctagattcattagtatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| ||||||||| |||||||||| |||| ||||
Sbjct: 40 tactagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgt 62
Query: 66 taat 69
||||
Sbjct: 63 taat 66
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
||||||||||| |||||| ||| ||| |||| ||| |||||||||||||||||||| |||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 158 ggagtac 164
| |||||
Sbjct: 10 gaagtac 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||| |||||| ||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/156 (82%), Gaps = 9/156 (5%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| || ||| || || || || ||||||||||||||||||||| || |||
Sbjct: 65 atgaaactacatctattta---------agtttcattaacatcaatataaatgtgggaaa 115
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| |||||||||||||||||||| |||| ||||
Sbjct: 116 tactagaatgacttacattgtgaaacggaggaagta 151
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/156 (82%), Gaps = 9/156 (5%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| || || || ||| ||| ||| ||||||||||||||||| ||| || |||
Sbjct: 91 atgaaact-------taaatagatg--tagtttcattaacatcaatatgaatgtgggaaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
|| || ||||||||| |||||||||| |||||||||
Sbjct: 40 taatagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||| ||||||||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 105 aacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||||| |||||| ||||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtg 149
|||| ||||||||| ||||||||||| ||| || ||||| ||| ||| ||||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 150 aaacagagggagta 163
|||| |||||||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||| |||||||||||||||||||||| || ||||||||| || ||||||||| ||||
Sbjct: 136 agtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgt 77
Query: 66 taataaatctagatagatatatat 89
|||| ||||||||| ||||||||
Sbjct: 76 taatgaatctagatgaatatatat 53
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||||||| ||||| |||||| ||||| ||| || ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 153 cagagggagtac 164
| |||| |||||
Sbjct: 124 cggaggaagtac 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||| ||||||||||||| || |||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
|||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct: 138 agtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| || |||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 68 ataaatctagatag 81
|| ||| |||||||
Sbjct: 65 atgaatgtagatag 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 107 catcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtac 137
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
|||| |||||||||||||||||| |||||| ||||| || |||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 153 cagagggagta 163
| |||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||| ||| ||||||| | ||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 68 ataaatctaga 78
|||||||||||
Sbjct: 77 ataaatctaga 67
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 89 tatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgt 148
|||||||||||| ||||||||| |||| ||| || | ||| ||| ||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 149 gaaacagagggagta 163
||||| |||||||||
Sbjct: 123 gaaacggagggagta 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||| ||||||||||| ||||||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcatt 42
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 91 tgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtga 150
|||||||||||||| |||||||||| ||| || |||| ||| |||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 151 aacagagggagta 163
||| |||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 105 aacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||||| ||| || |||| ||| ||||||||||||| |||||| |||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 68 ataaatc 74
|| ||||
Sbjct: 65 atgaatc 71
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 68 ataaatc 74
|| ||||
Sbjct: 78 atgaatc 72
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 97 gattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacaga 156
||||||||| ||||||||| ||| || |||| ||| |||||||||||||||||||| ||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 157 gggagta 163
|||||||
Sbjct: 11 gggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 97 gattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacaga 156
||||||||| ||||||||| ||| || |||| ||| ||||||||||||| |||||| ||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 157 gggagta 163
|||||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || ||||||| | ||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 68 ataaatctaga 78
|||||||||||
Sbjct: 80 ataaatctaga 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||||||||||| | |||||||||| | || |||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 78 atagatatatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatg 137
|||||| ||| | |||||||||| ||||||||| |||| ||| || | ||| ||| || |
Sbjct: 55 atagatgtatgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaag 114
Query: 138 acttacattgtgaaacagagggagta 163
||||||||||||||| |||||||||
Sbjct: 115 tcttacattgtgaaacggagggagta 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||| |||| |||||| | ||| |||||| | ||||||||||||||| |||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 131/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||||||||||||| | || ||||||| ||| || ||||| || ||
Sbjct: 3 agtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgt 62
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||| |||||| | | ||| |||| ||||||||||||||||||| | || ||||||
Sbjct: 63 taatgaatctaaacacatacatat--gtctagattcattaacatctaaatgaatatgggc 120
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| |||||| | ||||||||||||||| |||| ||||
Sbjct: 121 aatgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | |||||||||| || |||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||| ||| ||| ||||||||||||| || |||| |||||| ||
Sbjct: 98 atgaatctag--acatatgtatgtgtttagattcattaacgtctatatgtatatgagcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| || | ||||||||||||||| ||||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 84 atatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttac 143
|||||||||||||||||||||| ||||||||| |||| | ||||| |||||||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 144 attgtgaaacagagg 158
|||||||||| ||||
Sbjct: 113 attgtgaaacggagg 127
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 13 cctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaataaa 72
||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||| ||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 73 tctagatagatatat 87
|||||| | ||||||
Sbjct: 67 tctagacatatatat 53
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 18 gtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||||||| |||||||| | |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagag 157
|||| ||| ||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagag 11
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacat 145
|||| ||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 146 tgtgaaacagagggagta 163
| |||||| |||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||||||||| ||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 68 at 69
||
Sbjct: 65 at 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
||||||||| |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 100 tcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggg 159
|||||||||||||||| ||| || ||| | ||||||||||||||||| |||||| ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 160 agta 163
||||
Sbjct: 8 agta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 134 aatgacttacattgtgaaacagagggagta 163
||||||||||||||||||||||||||||||
Sbjct: 94 aatgacttacattgtgaaacagagggagta 123
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 131/159 (82%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||| ||||||||||| |||||||||| || ||||||| ||||||||||| ||||
Sbjct: 2 tagtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatg 61
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
||||| |||| |||| | | ||||||||||||||||||||||| | || ||||| |
Sbjct: 62 ttaatgaatc----tagacacacatatgtctagattcattaacatctagatgaatataag 117
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
||| ||| || | |||||||| |||||| |||||||||
Sbjct: 118 caatgctacaaagtcttacattatgaaacggagggagta 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 127/157 (80%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||| | || ||||||| | | |||||| | |||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||| | |||||||||||||||||||| |||| ||| || ||
Sbjct: 96 atgaatctagaca----tatgtgtgtctagattcattaacatctatatgaatgtgggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| || |||||||||| |||||| |||| |||||
Sbjct: 40 tgctagaaagacttacattatgaaacggaggaagtac 4
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||| |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 67 aataaatctagata 80
||| ||||||||||
Sbjct: 73 aatgaatctagata 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||| ||| ||||| ||| || |||| ||| ||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 153 cagagggagtac 164
| ||||||||||
Sbjct: 122 cggagggagtac 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| ||| || |||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 68 at 69
||
Sbjct: 65 at 66
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
|||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||| |||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 158 ggagta 163
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||| |||||||||| ||||||||||||| ||||||||| || ||||||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||| |||||| ||||| ||| ||||||||||||| |||||| ||| |||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||| |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 67 aataaatctagata 80
||| ||||||||||
Sbjct: 64 aatgaatctagata 77
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||| ||| ||||| ||| || |||| ||| ||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 153 cagagggagtac 164
| ||||||||||
Sbjct: 15 cggagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| ||| || |||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||| ||| ||| |||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcat 44
|||||||||||||||||||||||||||| | ||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 tgacttacattgtgaaacagagggagta 163
|||||||||||||||||| |||||||||
Sbjct: 84 tgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 68 at 69
||
Sbjct: 71 at 70
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 158 ggagta 163
| ||||
Sbjct: 126 gaagta 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttt 47
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttt 44
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 124 aaaatactaaaatgacttacattgtgaaacagagggagtac 164
||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 90 atgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtg 149
|||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 150 aaacagagggagta 163
||| |||||||||
Sbjct: 18 gaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||| |||||||||||||||| |||||||| || ||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||| |||||||||||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||| ||| || |||| ||| |||| ||||||||||||||| |||| ||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 91/105 (86%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||||||||||||| | || ||||||| ||||| ||| | |||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgt 101
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatc 110
|||||||||||| | ||||| |||||| ||||||||||||||||
Sbjct: 100 taataaatctag--acatatacatatgtttagattcattaacatc 58
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||| ||| ||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| | | ||| |||||||||||||| ||||||||| | || || || ||
Sbjct: 65 atgaatctaaaca--tatgtatatgtctagatttattaacatctaaatgtatgtgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| || | ||||||||||||||| ||||||||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagtac 159
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 63
Query: 67 aa 68
||
Sbjct: 64 aa 65
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 68 at 69
||
Sbjct: 70 at 69
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 103 ttaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagt 162
|||||||| |||| ||| || |||| ||| |||||||||||||||||||| ||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 163 ac 164
||
Sbjct: 5 ac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 100 tcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggg 159
||||||||||| |||| ||| || |||| ||| |||||||||||||||||||| ||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 160 agta 163
||||
Sbjct: 127 agta 130
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 66 atgaatcta 58
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
|||||||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 155 gagggagta 163
|||||||||
Sbjct: 118 gagggagta 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||| ||||||||||||||| ||||||||| ||||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/157 (80%), Gaps = 17/157 (10%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||| |||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 144 gtactctctccgtttcacaatgtaagtcattctagcatttt-------catattgatgtt 92
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
||| |||||||||| ||| ||||||||||||||||||||| ||| || ||
Sbjct: 91 aatgaatctagata----------tgtttagattcattaacatcaatatgaatgtgggaa 42
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| || |||||||||||||||||||| ||| |||||
Sbjct: 41 atgttagaatgacttacattgtgaaacggagagagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 68 ataaatctagata 80
|| ||||||||||
Sbjct: 55 atgaatctagata 43
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcat 44
|||||||||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 88 atatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattg 147
|||| |||||||||||||| |||||||| ||| || |||| ||| |||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 148 tgaaacagagggagta 163
|||||| |||| ||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
|||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 107 catcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 107 catcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| ||| ||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| ||| || ||||| ||| ||| |||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| ||| || ||||| ||| ||| |||||||||||||||| |||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 68 ataaatct 75
|| |||||
Sbjct: 75 atgaatct 68
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 68 at 69
||
Sbjct: 65 at 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 100 tcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggg 159
|||||| ||||||||| ||| ||| |||| ||| |||||||||||| |||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 160 agta 163
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 92 gtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaa 151
|||||||||||||| ||||||||| |||||| |||||||| ||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 152 acagagggagta 163
|| |||||||||
Sbjct: 125 acggagggagta 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| ||| |||| || ||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 76 atgaatctaga 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 107 catcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| ||||||| |||||||| ||| |||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
|||| ||||||||||||||||||||| ||| ||| |||| ||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 89/103 (86%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||||||||||||| | || ||||||| | || || ||||| |||||
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgt 101
Query: 66 taataaatctagatagatatatatatgtctagattcattaaca 108
|||| |||||| || ||||| | |||||||||||||||||||
Sbjct: 100 taatgaatctaaat--atatacacatgtctagattcattaaca 60
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| ||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | | ||||||| | ||||||||||||||| |||| ||||| | ||
Sbjct: 65 atgaatctagacatgtgtatatattt--agattcattaacatctatatgtatatggacaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| || | ||||||||||||||| ||||||||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagtac 159
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 81.8 bits (41), Expect = 3e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||||||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| ||| || ||||| ||| ||| |||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| ||| || |||| ||| ||| |||||||||||||||| |||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||| ||||||||| || |||||| |||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 79 atgaatctaga 69
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
||||||||||||||||||||||||||||| ||| || ||||| || ||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 147 gtgaaacagagggagta 163
|||||| |||| ||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 104 taacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| |||||| |||||||| ||| ||||||||||||| |||||| |||||||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 68 ataaatctaga 78
|| |||||||
Sbjct: 69 atggatctaga 59
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 79 tagatatatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatga 138
|||||| |||||||||||||| ||||||||||||||| ||| || |||| ||| |||||
Sbjct: 45 tagatagatatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatga 104
Query: 139 cttacattgtgaaacagagggagta 163
|||||||| |||||| |||| ||||
Sbjct: 105 cttacattatgaaacggaggaagta 129
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagt 33
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 acttacattgtgaaacagagggagta 163
|||||||||||||||| |||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattt-tagcatttttcacattcatattgatgtt 66
||||||||||||||||||||||||||| | || ||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 67 aataaatctagatagatat 85
||| |||||||||||||||
Sbjct: 65 aatgaatctagatagatat 83
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||| ||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 108 atcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| |||||| |||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatg-acttacattgtgaa 151
||||||||||||||||||||||| ||| || |||| || | | ||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 152 acagagggagta 163
|| |||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagca-ttttcacatccatattgatgtt 62
Query: 67 aat 69
|||
Sbjct: 63 aat 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 12 ccctccgtttcacaatgtaagtcattttagcatttttcacattcat 57
|||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagca-ttttcacattcat 64
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
|||||||||||||||||| || |||||| | ||| |||||||||||||||||||| |||
Sbjct: 69 attcattaacatcaatatggatgtgaaaa-tgctagaatgacttacattgtgaaacggag 11
Query: 158 ggagtac 164
| |||||
Sbjct: 10 gaagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 124 aaaatactaaaatgacttacattgtgaaacagaggg 159
||||| ||| |||||||||||||||||||| |||||
Sbjct: 73 aaaatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 75 atgaatctaga 65
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 85 tatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttaca 144
|||||||||||||||||||||| || ||||| ||| || |||| ||| |||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 145 ttgtgaaacagagggagta 163
||||||||| |||| ||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| ||||||||||||||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||| |||||| ||| ||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 68 ataaatctagatag 81
|| |||||||||||
Sbjct: 65 atgaatctagatag 78
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
||||||||||||| ||||| ||| ||| || ||||| ||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 153 cagagggagta 163
|||||| ||||
Sbjct: 15 cagaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||| ||| || |||| ||| ||||||||||||| |||||| |||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || ||| ||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||| |||||| ||||||||||||| |||| |||||| |
Sbjct: 98 atgaatctag--acatatatgcgtgtctaaattcattaacatctatatgaatatgggcag 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
||||| || | ||||||| ||||||| ||||||||||
Sbjct: 40 tactagaaagtcttacatggtgaaacggagggagtac 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacat 145
||||||||||||||||||||||||| |||| |||||| ||||||| || | |||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 146 tgtgaaacagagggagta 163
|||||||| |||||||||
Sbjct: 141 tgtgaaacggagggagta 158
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 68 at 69
||
Sbjct: 54 at 53
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcat 57
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
|||||||||||||||||| ||| | |||| ||| |||||||||||||||||||| |||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 158 ggagta 163
| ||||
Sbjct: 109 gaagta 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtacg 165
|||| ||| |||||||||||||||||||| |||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtacg 3
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 4 gtagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcat 57
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 1 gtagtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 17 cgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaat 69
|||| ||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| ||||| |||||||||||||| ||||||||||
Sbjct: 43 aaatgctagaatgagttacattgtgaaacggagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtg 149
|||||||| ||||||||| ||| || |||| |||||||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| |||||||| |||||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 68 at 69
||
Sbjct: 61 at 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 99 ttcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagg 158
||||||||||||| ||||||| || |||| ||| ||||||||| |||||||||| ||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 159 gagta 163
|||||
Sbjct: 117 gagta 121
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| |||||||||||||||||||||||| |||| |||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/156 (82%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||| | || || |||| | ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||| |||||| ||||||||||||| ||| | |||||| || | ||
Sbjct: 63 atgaatctagaaacatacatatat--ctagattcattaatatctaaataaatgtggacaa 120
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| |||||| | ||||||||||||||| |||| ||||
Sbjct: 121 tgctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 83.8 bits (42), Expect = 7e-16
Identities = 93/109 (85%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | |||||||||| | |||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatata 116
|| ||||||||| |||| ||| | |||||||||||||||||| |||||
Sbjct: 96 atgaatctagat--atatgtatgtttctagattcattaacatctatata 50
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 at 69
||
Sbjct: 65 at 66
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 99 ttcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagg 158
||||||||||||||||| ||| || |||| ||| |||||||| ||||||||||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 159 gagta 163
||||
Sbjct: 9 aagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcatt 37
|||||||| |||||||||||| ||||||||
Sbjct: 100 tactcccttcgtttcacaatgcaagtcatt 71
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 68 at 69
||
Sbjct: 65 at 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 101 cattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggga 160
||||||||| ||||||||| ||| |||| ||| |||||||||||||||||||| |||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 161 gta 163
|||
Sbjct: 7 gta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||||| |||||| |||||||||||||||| |||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
|||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcattt 46
|||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcattt 69
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 130/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| ||||||||||| |||||||| | || ||||||| ||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 67 aataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaa 126
|||||||||| ||| ||| ||| |||||||||||||||| |||| |||| ||| || |
Sbjct: 64 aataaatctatatatata-ata-atgtctagattcattagcatctatatgaatgtgggca 121
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|| || || | ||||||||||||||| |||||||||
Sbjct: 122 atgttagaaagtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || || |||| ||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||| | || ||||||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||||| | ||| |||||||||||||||| |||| ||| || | ||
Sbjct: 65 atgaatctag--acatatatgtgtgtttagattcattaacatctatatgaatgtggacaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||| || | |||||||| |||||| |||||||||
Sbjct: 123 acctagaaagtcttacattatgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||| | || ||| || | ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatat 115
|| ||||| | | | | ||||||||||||||||||||||||| ||||
Sbjct: 98 atgaatct--aaacacacatatatgtctagattcattaacatctatat 53
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || ||| ||| ||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||| || | ||| ||||||||||||||||||||||| | || |||||| ||
Sbjct: 98 atgaatctaaat--acatacatatgtctagattcattaacatctaaatgaatatgggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| || | ||||||||||||||| |||| ||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| || |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | |||| ||| | | |||||||||||||||| |||| | || ||
Sbjct: 65 atgaatctag--acatatgtatgtatttagattcattaacatccatatgtacgtgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
||||| || | ||||||||||||||| |||||||||
Sbjct: 123 tactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||| ||||| |||||||| | || ||||||| | ||||||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 68 ataaatctagata 80
|||||||||||||
Sbjct: 65 ataaatctagata 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||||||||||||||| |||||||| | || |||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacatt 54
||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttt 47
||||||||||||||||||||| |||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcatttt 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 124 aaaatactaaaatgacttacattgtgaaacagagggagtac 164
||||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 77 aaaatgctagaatgacttacattgtgaaacggagggagtac 117
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 117 aatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||| ||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 1e-14
Identities = 130/158 (82%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattc--atattgatgt 65
||||||||||||||||||||||||| | |||||||||| |||||| | |||| ||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaa 125
|||| ||||| | | | ||| |||||| |||||||||||||||| | || ||| ||
Sbjct: 100 taatgaatct--aaacacatacatatgtttagattcattaacatctaaatgaatgtgggt 43
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| ||| || | |||||||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacagagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 129/158 (81%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||| ||||||||||||||| | || ||||||| ||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatata--aatatgaaa 125
|| ||||| | | |||| ||| ||| ||||||||||||||| ||||| || |||
Sbjct: 65 atgaatct--aaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagc 122
Query: 126 aatactaaaatgacttacattgtgaaacagagggagta 163
||| |||||| | ||||||||||||||| |||||||||
Sbjct: 123 aatgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcattt 46
||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcaca 52
|||| ||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| |||||||||||||||||||||||| ||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 124 aaaatactaaaatgacttacattgtgaaacagagggagta 163
||||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 69 aaaatgctagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||||||||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 19 tttcacaatgtaagtcattttagcatttttcacattcatattga 62
||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| ||||||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 68 ataaatctaga 78
|||||||||||
Sbjct: 74 ataaatctaga 64
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||||||||||||||| | |||||| | || ||||||| |||||||||||||
Sbjct: 4 gtactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 82 atatatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
||||| ||||||||||||| ||||||||| |||| ||| || ||| ||| || | |||
Sbjct: 53 atatagatatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtctt 112
Query: 142 acattgtgaaacagagggagta 163
|||||||||||| |||| ||||
Sbjct: 113 acattgtgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||| |||||||| ||| |||||||||||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 68 at 69
||
Sbjct: 48 at 47
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 102 attaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggag 161
||||| |||||||||||| |||||||||||| |||||||| ||||||||||| |||| ||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 162 ta 163
||
Sbjct: 107 ta 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcatt 37
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
|||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||| ||||||||||| |||||||||| || ||||||| ||||||||||| ||||
Sbjct: 2 tagtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatg 61
Query: 65 ttaataaatctaga 78
||||| ||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
|||||||||||||||||||||||| |||| ||| || ||| ||| || ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 147 gtgaaacagagggagtac 164
|||||| |||| |||||
Sbjct: 21 atgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||||||||||||||| |||||||| | || |||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 68 at 69
||
Sbjct: 66 at 65
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
||||||||| |||||||| ||| | |||| ||| |||||||||||||||||||| |||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 158 ggagta 163
| ||||
Sbjct: 121 gaagta 126
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 106 acatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| ||||||||||||| ||| ||||| |||||||||||||| |||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacat 53
|||||||||| ||||||||||| ||||||||| ||| |||||||||||
Sbjct: 3 agtactcccttcgtttcacaatataagtcattctagtatttttcacat 50
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 121 tgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
|||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 47 tgaaaaatactagaatgacttatattgtgaaacgaagggagtac 4
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 30 aagtcattttagcatttttcacattcatattgatgttaataaatctagatagatatat 87
|||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 30 aagtcattttagcatttttcacattcatattgatgttaataaatctagat 79
|||||||| |||||||| ||||||||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 84 atatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactt 141
|||||| | ||||||| ||||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| |||||||| |||||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 68 at 69
||
Sbjct: 65 at 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| |||||||| |||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 68 ataaatct 75
|| |||||
Sbjct: 75 atgaatct 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 96 agattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacag 155
||||||||||| |||||| | ||| || |||| ||| ||||||||| |||||||||| |
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 156 agggagta 163
||| ||||
Sbjct: 128 aggaagta 135
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||| ||||||||||||| || ||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||| | ||||||||||||| || |||||| ||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 68 ataaatctaga 78
| ||||||||
Sbjct: 78 gtgaatctaga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
|||||||||||||||| ||||||| ||| ||| || ||||| || |||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 147 gtgaaacagagggagta 163
| |||| |||||||||
Sbjct: 122 ataaaacggagggagta 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcattt 46
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 tccgtttcacaatgtaagtcattttagcatt 45
||||||||||||| ||||||||| |||||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcatttta 40
||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatttta 37
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||||||||||||||||||||||| |||| ||||
Sbjct: 71 aaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 131 taaaatgacttacattgtgaaacagagggagtac 164
||||||||||||||||||||||| ||||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 84 atatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttac 143
||||| ||||||||||||||||||||| |||| ||| || | ||| ||| || | |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 144 attgtgaaacagagggagtac 164
||| |||||||||||||||||
Sbjct: 113 attatgaaacagagggagtac 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||| |||||| |||||||| | || ||||||| | ||||||||||| |||||
Sbjct: 134 agtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgt 75
Query: 66 taataaatctaga 78
|||| ||||||||
Sbjct: 74 taatgaatctaga 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||| ||||| ||||| |||||||| | || ||||||| | ||||||||||| |||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacat 145
|||||||||||||||||||| | ||||| ||| || |||| ||| ||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 146 tgtgaaacagagggagta 163
|||||||| |||| ||||
Sbjct: 113 tgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcattt 46
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||||||||||||||||||||||| ||||| |||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 aatgacttacattgtgaaacagagggagta 163
||||| |||||||||||||| |||||||||
Sbjct: 66 aatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||| ||||| ||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 68 ataaatctagatagatatat 87
|| |||||||| | ||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 84 atatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttac 143
||||||||||||||||||||||||||| |||| ||| || ||| ||| ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 144 attgtgaaa 152
||| |||||
Sbjct: 113 attatgaaa 121
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||||||||||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
||||||||||||| |||||| |||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| | ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 68 ataaatctagatagatatat 87
|| |||||||| | ||||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 84 atatatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttac 143
||||||||||||||||||||||||||| | || ||| || | ||| ||| || | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 144 attgtgaaacagagggagta 163
|||||||||| |||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 127/157 (80%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||| | || ||||||| | ||||||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||||| |||||||||||||||||||||| ||||| ||
Sbjct: 96 atgaatctagacacgcatata----cctagattcattaacatcaatatgaatataggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| ||| || | |||||||| |||||| ||||||||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggagggagtac 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 128/159 (80%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 5 tagtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||||||||| |||||||| | || ||||||| | |||||||||||||
Sbjct: 2 tagtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatg 61
Query: 65 ttaataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaa 124
||||| |||| ||| ||||| ||||||||||||||||||| |||| ||| || |
Sbjct: 62 ttaatgaatc----taggtatatgcgtgtctagattcattaacatttatatgaatgtgga 117
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
||| ||| || | |||||||| |||||| |||| ||||
Sbjct: 118 caatgctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||| ||| |||||||| |||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcac 51
|||| ||||||||||||||||||||||||| |||||||| ||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctcac 83
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 87/103 (84%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || ||||||| | ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatc 110
|| ||||| ||| | ||||| ||||||||||||||| ||||
Sbjct: 98 atgaatct--atatacttatatgtgtctagattcattagcatc 58
Score = 58.0 bits (29), Expect = 4e-08
Identities = 125/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| |||||||| | || ||||||| |||||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||||||| | ||||| || | |||||||||||||||| |||| ||| | ||
Sbjct: 65 atgaatctagacacatataagta--tatagattcattaacatctatatgaatgcgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| || | ||||||||||||||| |||||||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcattt 46
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcattt 111
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||| || |||| ||| |||||||||||||||||||| |||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 16 ccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
|||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 112 atataaatatgaaaaatactaaaatgacttacattgtgaaac 153
|||||||| || |||| ||| ||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaac 96
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgat 63
|||||||||||||||||||| ||||||||| ||||| ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattga 62
|||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 89 tatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgt 148
|||||||||||||||||||||| ||||||||||| | ||| ||| || | |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 149 gaaacagagggagta 163
||||| ||| |||||
Sbjct: 123 gaaacggagagagta 137
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||||||||| |||||||||||| ||| || ||||| ||||||
Sbjct: 138 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 79
Query: 67 aat 69
|||
Sbjct: 78 aat 76
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
||||||||||||| |||| |||||| ||| |||||||| ||||||||||||||| |||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 158 ggagtac 164
| |||||
Sbjct: 132 gaagtac 138
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcata 58
|||| ||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 124 aaaatactaaaatgacttacattgtgaaacagagggagta 163
||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 44 aaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||||||| ||||||||| ||| |||| || ||| ||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 79 atgaatctaga 69
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 87 tatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
|||||||||||||||||||||| |||| || || |||| ||| ||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 147 gtgaaacagagggagta 163
||||||| |||| ||||
Sbjct: 123 gtgaaacggaggaagta 139
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||| |||||||||||||||||||| |||||||||||| ||| || ||||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 63
Query: 67 aat 69
|||
Sbjct: 64 aat 66
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagag 157
||||||||||||| |||| |||||| ||| |||||||| ||||||||||||||| |||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 158 ggagtac 164
| |||||
Sbjct: 10 gaagtac 4
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcata 58
|||| ||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtacg 165
|||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagtacg 3
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcattt 46
|||||||||| |||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 57 aaatgctagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 29 taagtcattttagcatttttcacattcatattgatgttaataaatctaga 78
||||||||| |||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctaga 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 25 aatgtaagtcattttagcatttttcacattcatattgatgttaat 69
||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaat 45
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgactta 142
|||||||||||||||||||| ||||||||| ||| ||| |||| ||| |||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 98 attcattaacatcaatataaatatgaaaaatactaaaatgacttacatt 146
|||||||| ||||||||| ||| ||| |||| ||| |||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 120 gtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 15 tccgtttcacaatgtaagtcattttagcatttttcacattcatattgatg 64
||||||||||||| ||||||||| |||||||| || |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/89 (85%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| | ||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 87 cacattcatataggtgttaatgaatctagata--tatatagatgtctagattcattaaca 30
Query: 109 tcaatataaatatgaaaaatactaaaatg 137
| |||| ||| || ||||| ||| ||||
Sbjct: 29 cctatatgaatgtggaaaatgctagaatg 1
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 34 cattttagcatttttcacattcatattgatgttaataaatctagatagatatatatatgt 93
|||| ||||||||| ||||||||||| | ||||||| ||||||| | || ||||||| |
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctag--acatctatatatat 58
Query: 94 ctagattcattaaca 108
|||||||||||||||
Sbjct: 59 ctagattcattaaca 73
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 88/105 (83%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||| ||||||||||| |||| ||| | || ||||||| ||||||||| | |||||
Sbjct: 3 agtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgt 62
Query: 66 taataaatctagatagatatatatatgtctagattcattaacatc 110
|||| |||||| | | |||| |||||||||||||||||||||||
Sbjct: 63 taatgaatctaaacacatat--atatgtctagattcattaacatc 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaag 32
|||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaag 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/50 (88%), Gaps = 2/50 (4%)
Strand = Plus / Minus
Query: 61 gatgttaataaatctagatagatatatatatgtctagattcattaacatc 110
||||||||| |||||||| | ||||||| ||| ||||||||||||||||
Sbjct: 105 gatgttaatgaatctagaca--tatatatgtgtttagattcattaacatc 58
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| |||||||| | || ||||||| ||||||||||| ||||||
Sbjct: 141 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 82
Query: 67 aataaatcta 76
||| ||||||
Sbjct: 81 aatgaatcta 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 95 tagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaaca 154
|||||||||||||||| |||| ||| || ||| ||| || | |||||||| ||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 155 gagggagtac 164
||||||||||
Sbjct: 132 gagggagtac 141
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 122/151 (80%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 13 cctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaataaa 72
||||||||||| ||| ||||||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 73 tctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaatacta 132
|| | || |||||| || |||||||||||| ||| ||| ||| || ||| |||
Sbjct: 70 tc----tggacatatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 133 aaatgacttacattgtgaaacagagggagta 163
||||||||| |||||||||| |||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagta 156
Score = 60.0 bits (30), Expect = 1e-08
Identities = 121/151 (80%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| ||||||||| ||| ||| ||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| |||| ||| | ||||||||| ||||||||||||||| |||| ||| || ||
Sbjct: 96 atgaatc----tagccacatatatgtccagattcattaacatctatatgaatgtgggcaa 41
Query: 128 tactaaaatgacttacattgtgaaacagagg 158
| ||| ||||||||| ||| |||||| ||||
Sbjct: 40 tgctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| ||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||| | | | ||| |||||||||||||||||| |||| | || ||| || ||
Sbjct: 65 atgaatct--aaacacatacatatgtctagattcattagcatctaaatgaatttgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagta 163
| ||| || | ||||||||||||||| |||||||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 85/102 (83%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
||||||||||||||||||||||||| | || ||||||| || |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacat 109
|| ||||||| | |||| ||| ||| |||||||||||||||
Sbjct: 98 atgaatctag--acatatgtatgtgtttagattcattaacat 59
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| |||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaata 70
||||||||||||| |||||||| | || ||||||| | ||||||||||| ||||||||
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 71 aatctaga 78
||||||||
Sbjct: 45 aatctaga 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 91 tgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtga 150
||||||||||| |||||||| |||| ||| || | ||| ||| || | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 151 aacagaggga 160
||| ||||||
Sbjct: 96 aacggaggga 105
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattc 55
|||| ||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 134 aatgacttacattgtgaaacagagggagta 163
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcattt 46
||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacatt 54
|||||| ||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 91 tactccatccgtttcataatataagtcattttagcatttctcacatt 45
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagtac 164
|||| ||| |||||||||||||||||||| |||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| | | |||| | || ||||||| | |||||||| || ||||||
Sbjct: 4 gtactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtt 63
Query: 67 aataaatctaga 78
||||||||||||
Sbjct: 64 aataaatctaga 75
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagc 42
||||||||||||||||||||||||||||||| ||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcattt 46
|||| |||||||| |||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 134 aatgacttacattgtgaaacagagggagtac 164
|||||||||||||||||||| ||||||||||
Sbjct: 65 aatgacttacattgtgaaacggagggagtac 95
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 86/103 (83%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||| |||||| |||||||| | |||||||||| ||||||||||| ||| |
Sbjct: 159 gtactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatc 100
Query: 67 aataaatctagatagatatatatatgtctagattcattaacat 109
||| ||||| | | |||||| | |||||||||||||||||||
Sbjct: 99 aatgaatct--aaacatatatgtgtgtctagattcattaacat 59
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||| |||||| |||||||| | || |||| || ||||||||||| ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaatatgaaaaa 127
|| ||||||| | | | |||||||| |||||||||| | ||| |||| ||| || ||
Sbjct: 65 atgaatctag--acacacatatatgtttagattcattgatatctatatgaatgtgggcaa 122
Query: 128 tactaaaatgacttacattgtgaaacagagggagtac 164
| |||||| | |||||||| |||||| ||||||||||
Sbjct: 123 tgctaaaaagtcttacattatgaaaccgagggagtac 159
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||| |||||||| | || ||||||| ||||| ||||| |||||
Sbjct: 149 agtactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgt 90
Query: 66 taataaatctag 77
|||| |||||||
Sbjct: 89 taatgaatctag 78
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || ||||||| ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 7e-10
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| | | |||| | || ||||||| ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatat 115
|| |||||| ||| |||| | | ||| |||||||||||||||| ||||
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatat 112
Score = 63.9 bits (32), Expect = 7e-10
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| | | |||| | || ||||||| ||||||||||| |||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatat 115
|| |||||| | | | | |||||| | |||||||||||||||| ||||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatat 53
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| |||||||| ||||||||| |||||||| || |||||||||||||||
Sbjct: 22 cacattcatatatatgttaatgaatctagat--atatatatgtgcctagattcattaaca 79
Query: 109 tcaatat 115
|| ||||
Sbjct: 80 tctatat 86
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| ||||||||| ||||||| | ||||||||| ||||||||||||||||
Sbjct: 93 cacattcatatagatgttaatgaatctaggcacatatatata--tctagattcattaaca 36
Query: 109 t 109
|
Sbjct: 35 t 35
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 6 agtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
|||||||||||||||||| |||||||| | || ||||| | || |||||||||| |||||
Sbjct: 3 agtactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgt 62
Query: 66 taat 69
||||
Sbjct: 63 taat 66
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| ||||||||| ||||||| | | ||||||||||||||||||||| |||
Sbjct: 22 cacattcatatagatgttaatgaatctag--acacatatatatgtctagattcatttaca 79
Query: 109 tcaatat 115
|| ||||
Sbjct: 80 tctatat 86
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| ||||| ||| |||||||| | ||||||| ||||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagaca--tatatatgtgtctagattcattaaca 36
Query: 109 tcaatat 115
|| ||||
Sbjct: 35 tctatat 29
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 93 tctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaa 152
|||||||||||||||||| |||| ||||||| ||| ||| || |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 153 cagagggagta 163
|||||| ||||
Sbjct: 15 cagaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| ||| |||| | || ||||||| || |||||||| |||| |
Sbjct: 141 gtactccctccgtttcataatataagactttctagcattacccatattcatatagatgct 82
Query: 67 aataaatctagat 79
||| |||||||||
Sbjct: 81 aatgaatctagat 69
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| ||||||| | |||||||||| ||||||||||| |||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 68 ataaatctaga 78
|| ||| ||||
Sbjct: 82 atgaatttaga 72
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||| |||||||| | || ||||||| ||||||||||| |||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||| | || ||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 68 ataaatctaga 78
|| ||| ||||
Sbjct: 65 atgaatttaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgt 65
||||||||||||||||| |||||||| | || ||||||| ||||||||||| |||||
Sbjct: 143 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcattt 46
|||||||||||||||| ||||||||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcattt 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 125 aaatactaaaatgacttacattgtgaaacagagggagta 163
|||| ||| ||||||||||||| |||||| |||||||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/71 (85%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 49 cacattcatattgatgttaataaatctagata----gatatatatatgtctagattcatt 104
||||||||||| ||||||||| |||||||||| ||||| || ||||||||||||||
Sbjct: 18 cacattcatatggatgttaatgaatctagatatatggatattaatgtgtctagattcatt 77
Query: 105 aacatcaatat 115
|||||| ||||
Sbjct: 78 aacatccatat 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/71 (85%), Gaps = 4/71 (5%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagat--atat--atatgtctagattcatt 104
||||||||||| ||||||||| |||||||| | || |||| |||| ||||||||||||
Sbjct: 95 cacattcatatggatgttaatgaatctagacacattaatatccatatatctagattcatt 36
Query: 105 aacatcaatat 115
|||||| ||||
Sbjct: 35 aacatccatat 25
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 86 atatatgtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacat 145
||||| ||||||||||||||| ||| |||| ||||| |||| || ||||||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 146 tgtgaaacagagggagta 163
| |||||| |||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatat 59
||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||
Sbjct: 137 gtacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcatt 37
|||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcatt 34
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||| | | |||| | || ||||||| ||||||||||| ||||||
Sbjct: 160 gtactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtt 101
Query: 67 aataaatctagata 80
||| ||||||||||
Sbjct: 100 aatgaatctagata 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 90/109 (82%), Gaps = 3/109 (2%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| | | |||| | || ||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 68 a-taaatctagatagatatatatatgtctagattcattaacatcaatat 115
| | |||||||| | || |||||| ||||||||||||||||| ||||
Sbjct: 65 aattaatctagacacctacatatat--ctagattcattaacatctatat 111
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacat 53
|||||||||||||||| ||||||||||||| ||| ||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/74 (83%), Gaps = 8/74 (10%)
Strand = Plus / Minus
Query: 98 attcattaacatcaatataaatat--------gaaaaatactaaaatgacttacattgtg 149
|||||||||||||||||||||||| | ||||||||| ||||||||||||| ||
Sbjct: 78 attcattaacatcaatataaatatattgatgtggaaaatactagaatgacttacattatg 19
Query: 150 aaacagagggagta 163
|||| |||||||||
Sbjct: 18 aaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 107 catcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagta 163
|||||||||||||||| ||||| ||| ||||||||| ||| ||||| |||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||| ||||||||||||||||||||| ||| || |||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatatt 60
|||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 92/112 (82%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| |||||||| | || ||||||| ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatataaat 119
|| ||||||| | | |||||||||||||||||||| ||| ||||||||
Sbjct: 98 atgaatctag--gcacacatatatgtctagattcattagtatctatataaat 49
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 14 ctccgtttcacaatgtaagtcattttagcattt 46
|||||||||||||||||||||||| ||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcattt 51
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcatt 37
|||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 127 atactaaaatgacttacattgtgaaacagagggagta 163
|||||| |||||||||||||||||||| |||| ||||
Sbjct: 41 atactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| | | |||| | || ||||||| |||| |||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatat 115
|| || ||| || | |||||||||||||||||||||| |||| ||||
Sbjct: 65 atgaaccta--tacacatatatatgtctagattcattagcatctatat 110
Score = 50.1 bits (25), Expect = 1e-05
Identities = 88/108 (81%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| ||||||||||| | | |||| | || ||||||| ||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatcaatat 115
|| ||||||| | |||||||| ||| ||| |||||||||||| ||||
Sbjct: 98 atgaatctag--acatatatatgtgtataggttcattaacatctatat 53
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 96 agattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacag 155
||||||||||||||| | |||||| || | ||||||| || | ||||||||||||||| |
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 156 aggga 160
|||||
Sbjct: 111 aggga 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatt 45
|||||||||||||||||||||||||| | || |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaaggctttctagcatt 42
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 11 tccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgttaata 70
|||||||||||||||||||||| | || ||| ||| | |||||| || | |||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 71 aatct 75
|||||
Sbjct: 55 aatct 51
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 139 cttacattgtgaaacagagggagtac 164
||||||||||||||| ||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| |||| | || ||||||| ||||| ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 76 atgaatcta 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 atatatatatgtctagattcattaacatcaatat 115
||||| |||||| |||||||||||||||| ||||
Sbjct: 55 atatacatatgtttagattcattaacatctatat 88
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| |||| | || ||||||| ||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 68 ataaatcta 76
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 82 atatatatatgtctagattcattaacatcaatat 115
||||| |||||| |||||||||||||||| ||||
Sbjct: 86 atatacatatgtttagattcattaacatctatat 53
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%), Gaps = 5/77 (6%)
Strand = Plus / Plus
Query: 39 tagcatttttcacattcatattgatgttaataaatctagatagatatatatatgtctaga 98
|||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 2 tagcatttcccacgttcatattgatattaatgaatctagatagatata-----atctaga 56
Query: 99 ttcattaacatcaatat 115
|||||||| ||||||||
Sbjct: 57 ttcattaatatcaatat 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%), Gaps = 5/77 (6%)
Strand = Plus / Minus
Query: 39 tagcatttttcacattcatattgatgttaataaatctagatagatatatatatgtctaga 98
|||||||| ||| ||||||||||| ||||| ||||||||| ||||| | ||||||
Sbjct: 90 tagcatttcccacgttcatattgatattaatgaatctagat-----tatatctatctaga 36
Query: 99 ttcattaacatcaatat 115
|||||||| ||||||||
Sbjct: 35 ttcattaatatcaatat 19
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 92 gtctagattcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaa 151
||||||||||||||||||| |||| || || ||| ||| ||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 152 acagagggagta 163
||||||||||||
Sbjct: 121 acagagggagta 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatt 45
|||| ||||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttt 47
|||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcatttt 44
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcattt 46
|||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcattt 108
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 100 tcattaacatcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagaggg 159
||||| |||||||||||||| ||| |||| ||| ||||||||| ||||| |||| ||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 160 agta 163
||||
Sbjct: 90 agta 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattt 38
||||| |||||||||||||| ||||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcattt 35
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 56.0 bits (28), Expect = 2e-07
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| ||||||||| |||||| | | | |||| | ||| ||||||||||||||
Sbjct: 119 cacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaaca 60
Query: 109 tcaatataaatatgaaaaatactaaaatgacttacattgtgaaacagagggagtac 164
|| |||| ||| || ||| ||| || | |||| | | |||||||||||||||||
Sbjct: 59 tctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagtac 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| ||||||||| |||||| | | | |||| | ||| ||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaaca 105
Query: 109 tcaatat 115
|| ||||
Sbjct: 106 tctatat 112
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 84/103 (81%), Gaps = 6/103 (5%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||||||| |||| | |||||||| | ||||| |||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 68 ataaatctagatagatatatatatgtctagattcattaacatc 110
|| ||||| | ||| |||||||||||||||||||||||
Sbjct: 94 atgaatct------aaatacatatgtctagattcattaacatc 58
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||| |||||||||||||||||||| | || |||| || ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 68 ataaatctaga 78
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagatatat 87
|||||||||||||||| ||||||||||||| | ||||||
Sbjct: 105 cacattcatattgatgctaataaatctagacatatatat 67
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tagatatatatatgtctagattcattaacatcaatat 115
|||| ||||||||||||||||| |||| |||||||||
Sbjct: 62 tagacatatatatgtctagatttattagcatcaatat 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 atatatatgtctagattcattaacatcaatat 115
|||||||||||||| ||||||| |||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatat 19
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatt 45
||||||||||||||||| |||||||||| || |||||||
Sbjct: 84 gtactccctccgtttcataatgtaagtctttctagcatt 46
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 49 cacattcatattgatgttaataaatctagatagatatatatatgtctagattcattaaca 108
||||||||||| ||||||||| ||||||| | ||||| |||| |||||||||||||||
Sbjct: 93 cacattcatatagatgttaatgaatctaggca--tatatgtatgcctagattcattaaca 36
Query: 109 tcaatataaatatg 122
| |||| ||||||
Sbjct: 35 tatatatgaatatg 22
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 86 atatatgtctagattcattaacatcaatat 115
||||||| ||||||||||||||||| ||||
Sbjct: 57 atatatgcctagattcattaacatctatat 86
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
|||||||||||||| |||||||||| | || ||||||| ||| |||||||| ||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatgtt 50
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 82 atatatatatgtctagattcattaacatcaatat 115
|||||||||||||||||||||||| |||| ||||
Sbjct: 57 atatatatatgtctagattcattagcatctatat 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| | | |||| | || || |||| ||||||||||| |||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 68 ataaatctagatagatatatatat 91
|| |||||||| | ||||||||||
Sbjct: 78 atgaatctagacatatatatatat 55
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 7 gtactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtt 66
||||||||||||||||||||| |||| | || || ||| ||||||||| | ||||||
Sbjct: 125 gtactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtt 66
Query: 67 aataaatcta 76
||||||||||
Sbjct: 65 aataaatcta 56
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 84 atatatatgtctagattcattaacat 109
||||||||||||||||||||||||||
Sbjct: 50 atatatatgtctagattcattaacat 25
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 84 atatatatgtctagattcattaacat 109
||||||||||||||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacat 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 8 tactccctccgtttcacaatgtaagtcattttagcatttttcacattcatattgatgtta 67
|||||||||||||||| | | |||| | || ||||||| ||||||||||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 68 ataaatctagatagatatat 87
|| |||||||| | ||||||
Sbjct: 72 atgaatctagacatatatat 53
