miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 93/110 (84%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 58 atatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatatga 117
|||| |||||||||| ||||||| |||||| | |||| ||||| |||||||| |||||||
Sbjct: 53 atatatatgttaataaatctagacatatatatgtgccaagattcattaacatatatatga 112
Query: 118 atgaatgtgggcaatgctagnaagttttatancctgaaatggaggtagta 167
|||||||||||||||| |||| ||||| | ||||| ||||||||||
Sbjct: 113 ----atgtgggcaatgctagaaagtcttataacttgaaacggaggtagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 70/84 (83%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 84 atatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagtt 143
|||| |||| |||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 84 atatatatgtctagatttattaacatatat----atgaatgtgggcaatgccagaaagtc 29
Query: 144 ttatancctgaaatggaggtagta 167
||||| | ||||| ||||| ||||
Sbjct: 28 ttataacttgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 87.7 bits (44), Expect = 5e-17
Identities = 78/90 (86%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 58 atatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatatga 117
|||| ||||||||| |||||||||||||| | |||||||||| ||||||||||||
Sbjct: 29 atatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat---- 84
Query: 118 atgaatgtgggcaatgctagnaagttttat 147
|||||||||||||||||||| |||| ||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttat 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 118 atgaatgtgggcaatgctagnaagttttat 147
|||||||||||||||||||| |||| ||||
Sbjct: 30 atgaatgtgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 77/90 (85%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 58 atatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatatga 117
|||| ||||||||| ||||||| || ||||| |||||||||| ||||||||||||
Sbjct: 29 atatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatctat---- 84
Query: 118 atgaatgtgggcaatgctagnaagttttat 147
|||||||||||||||||||| |||| ||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| |||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 104 atgttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatg 48
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 118 atgaatgtgggcaatgctagnaagttttatancctgaaatggaggtagta 167
|||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%), Gaps = 4/67 (5%)
Strand = Plus / Minus
Query: 82 atatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaag 141
||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 86 atatatgtatgcctagattcgttaacatctatatg----aatgtgggcaatgctagaaag 31
Query: 142 ttttata 148
| |||||
Sbjct: 30 tcttata 24
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 71.9 bits (36), Expect = 3e-12
Identities = 76/90 (84%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 58 atatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatatga 117
|||| ||||||||| |||||| ||| || |||||||||||| ||||||||||||
Sbjct: 29 atatatatgttaatgaatctaggcatacatatatgcctagattcattaacatctat---- 84
Query: 118 atgaatgtgggcaatgctagnaagttttat 147
|||||||||||||||||||| |||| ||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttat 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| |||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 80 atgttaatgaatctaggcatatatgtatgcctagattcattaacatatatatgaat 25
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||| |||||||| || ||||||| |||||||||||||||||||
Sbjct: 104 atgttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatg 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%), Gaps = 4/49 (8%)
Strand = Plus / Plus
Query: 94 ctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagt 142
||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 89 ctagattcattaacatctat----atgaatgtgggcaatgctagaaagt 133
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||| |||||||| || ||||||| |||||||||||||||||||
Sbjct: 59 atgttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatg 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%), Gaps = 4/49 (8%)
Strand = Plus / Minus
Query: 94 ctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagt 142
||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 74 ctagattcattaacatctatatg----aatgtgggcaatgctagaaagt 30
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| |||||||||||| | |||| ||||||| ||||||||||||||||||
Sbjct: 104 atgttaatgaatctagatatatgtctatgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 7e-10
Identities = 111/135 (82%), Gaps = 10/135 (7%)
Strand = Plus / Plus
Query: 16 gtttcatattatanaactttttagcattacccatacattcatatatntatgttaatanat 75
||||||||||||| ||||| ||||||| |||| |||||||||| |||||||| ||
Sbjct: 15 gtttcatattataagactttctagcattgccca--cattcatatag--atgttaatgaat 70
Query: 76 ctagatatatatgtatgccta--gatttattaacatctatatgaatgaatgtgggcaatg 133
||| |||||||||| || || |||| |||||||||||||||| ||||||||||||
Sbjct: 71 ctatatatatatgtgtgtgtatagattcattaacatctatatga----atgtgggcaatg 126
Query: 134 ctagnaagttttata 148
|||| |||| |||||
Sbjct: 127 ctagaaagtcttata 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%), Gaps = 4/54 (7%)
Strand = Plus / Minus
Query: 95 tagatttattaacatctatatgaatgaatgtgggcaatgctagnaagttttata 148
|||||| ||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 73 tagattcattaacatctatatgaatg----tgggcaatgctagaaagtcttata 24
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 56 atatatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatat 115
|||||| |||||||| || |||||||| |||| || ||||||| ||||||||||||||
Sbjct: 112 atatatagatgttaatgaatttagatatagatgtgtgtctagattcattaacatctatat 53
Query: 116 gaatg 120
|||||
Sbjct: 52 gaatg 48
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 61.9 bits (31), Expect = 3e-09
Identities = 63/74 (85%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 94 ctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagttttatancctg 153
||||||| |||||||||||||||| |||||||||||||||| |||| ||||| |||
Sbjct: 90 ctagattcattaacatctatatga----atgtgggcaatgctagaaagtcttataatctg 145
Query: 154 aaatggaggtagta 167
||| ||||| ||||
Sbjct: 146 aaacggagggagta 159
Score = 44.1 bits (22), Expect = 6e-04
Identities = 87/106 (82%), Gaps = 5/106 (4%)
Strand = Plus / Minus
Query: 16 gtttcatattatanaactttttagcattacccatacattcatatatntatgttaatanat 75
|||||| |||||| ||||| ||||||| |||| |||||||||| |||||||| ||
Sbjct: 149 gtttcagattataagactttctagcattgccca--cattcatatag--atgttaatgaat 94
Query: 76 ctagatatatatgtatgcctagatttatt-aacatctatatgaatg 120
|||||||||| | || ||||||| ||| ||||||||||||||||
Sbjct: 93 ctagatatatgtaggtgtctagattaatttaacatctatatgaatg 48
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 3e-09
Identities = 72/86 (83%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 86 atgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagtttt 145
|||||| ||| |||| |||||||||||| |||||||||| || |||||| |||| ||
Sbjct: 62 atgtataccttgattcattaacatctat----atgaatgtggacagtgctagaaagtctt 117
Query: 146 atancctgaaatggaggtagtaataa 171
||| ||||||| ||||| ||||||||
Sbjct: 118 atagcctgaaacggaggaagtaataa 143
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| | ||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct: 59 atgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatg 115
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||| |||||||| || |||||| |||||||||||||||||||
Sbjct: 59 atgttaatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatg 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 89 tatgcctagatttattaacatctatatgaatg 120
|||| ||||||| |||||||||||||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatg 48
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||| ||||| |||||||||||| |||| ||||||||||||||
Sbjct: 104 atgttaatgaatctagacttatatatatgcctagattcattagcatctatatgaatg 48
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%), Gaps = 4/54 (7%)
Strand = Plus / Plus
Query: 89 tatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagt 142
|||| |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 60 tatgtctagatttattaacatctat----atgaatgtgggcaatgctagaaagt 109
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| | ||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct: 104 atgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatg 48
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||| | |||| |||| ||||||| |||||||||||||||||||
Sbjct: 104 atgttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatg 48
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| ||||||| |||||| | || ||||||| ||||||||||||||||||
Sbjct: 59 atgttaatgaatctagacatatatatgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%), Gaps = 4/69 (5%)
Strand = Plus / Plus
Query: 74 atctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatg 133
||||||| |||||||| |||||||||| |||| ||| ||||||| ||||||||||||
Sbjct: 69 atctagacatatatgtgtgcctagattcattagcatatatatga----atgtgggcaatg 124
Query: 134 ctagnaagt 142
|||| ||||
Sbjct: 125 ctagaaagt 133
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| || |||||||| |||| || ||||||| ||||||||||||||||||
Sbjct: 59 atgttaatgaatttagatatagatgtgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| |||||||||||| | ||| ||||||| ||||||||||||||||||
Sbjct: 59 atgttaatgaatctagatatatgtctatatctagattcattaacatctatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||||||| | ||| ||||||| ||||||||| |||||||||
Sbjct: 104 atgttaatgaatctagatatagacatatatctagattcattaacatccatatgaatg 48
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 65 tgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
||||||| |||||||||||||| ||| ||||||| ||||||| |||||||||||
Sbjct: 60 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatg 115
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 65 tgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
||||||| |||||||||||||| ||| ||||||| ||||||| |||||||||||
Sbjct: 73 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatg 18
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 89 tatgcctagatttattaacatctatatgaatg 120
|||| |||||||||||||||||||||||||||
Sbjct: 63 tatgtctagatttattaacatctatatgaatg 94
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 85 tatgtatgcctagatttattaacatctatatgaatg 120
||||| || |||||||||||||||||||||||||||
Sbjct: 62 tatgtgtgtctagatttattaacatctatatgaatg 97
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 54/63 (85%), Gaps = 4/63 (6%)
Strand = Plus / Minus
Query: 58 atatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatatga 117
|||| ||||||||| |||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 72 atatatatgttaatgaatctagatatatatgt----ctagattcattaacatatatatga 17
Query: 118 atg 120
|||
Sbjct: 16 atg 14
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/79 (83%), Gaps = 4/79 (5%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||| | |||| | |||| ||||||||||||||||||| |||| ||
Sbjct: 59 atgttaatgaatctaaacatatgtatatgtctagatttattaacatcta----aatgtat 114
Query: 124 gtgggcaatgctagnaagt 142
|||||||||||||| ||||
Sbjct: 115 gtgggcaatgctagaaagt 133
Score = 52.0 bits (26), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
||||||||| ||||||| ||||| |||| |||||| ||||||||||| |||||||
Sbjct: 104 atgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 74 atctagatatatatgtatgcctagatttattaacatctatatgaatg 120
||||| |||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 94 atctaaatatatatagatgtctagattcattaacatctatatgaatg 48
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%), Gaps = 4/55 (7%)
Strand = Plus / Plus
Query: 94 ctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagttttata 148
||||||| |||||||||||||||| |||||||||||||||| |||| |||||
Sbjct: 57 ctagattcattaacatctatatga----atgtgggcaatgctagaaagtcttata 107
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 94 ctagatttattaacatctatatgaatg 120
|||||||||||||||||||||||||||
Sbjct: 74 ctagatttattaacatctatatgaatg 48
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 74 atctagatatatatgtatgcctagatttattaacatctatatgaatg 120
||||||| |||||| | || ||||||| |||||||||||||||||||
Sbjct: 70 atctagacatatatatgtgtctagattcattaacatctatatgaatg 24
Score = 52.0 bits (26), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||| | |||| |||| ||||||| ||| |||||||||||||||
Sbjct: 35 atgttaatgaatctagacacatatatatgtctagattcatttacatctatatgaatg 91
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%), Gaps = 4/54 (7%)
Strand = Plus / Plus
Query: 95 tagatttattaacatctatatgaatgaatgtgggcaatgctagnaagttttata 148
|||||| |||||||||||||||| |||||||||||||||| |||| |||||
Sbjct: 64 tagattcattaacatctatatga----atgtgggcaatgctagaaagtcttata 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 119 tgaatgtgggcaatgctagnaagttttata 148
||||||||||||||||||| |||| |||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttata 24
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%), Gaps = 4/58 (6%)
Strand = Plus / Minus
Query: 84 atatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaag 141
|||||| || ||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct: 84 atatgtgtgtctagattcattaacatctatatg----aatgtgggcaatgctagaaag 31
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%), Gaps = 4/54 (7%)
Strand = Plus / Plus
Query: 95 tagatttattaacatctatatgaatgaatgtgggcaatgctagnaagttttata 148
|||||| |||||||||||||||| |||||||||||||||| |||| |||||
Sbjct: 64 tagattcattaacatctatatga----atgtgggcaatgctagaaagtcttata 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 119 tgaatgtgggcaatgctagnaagttttata 148
||||||||||||||||||| |||| |||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttata 24
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||||||| |||| |||| ||||||| ||||||||| |||||| ||
Sbjct: 33 atgttaatgaatctagatagatatatatgtctagattcattaacatcaatatga----at 88
Query: 124 gtgggcaatgctag 137
||||| ||||||||
Sbjct: 89 gtgggaaatgctag 102
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 52.0 bits (26), Expect = 3e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 118 atgaatgtgggcaatgctagnaagttttatancctgaaatggaggtagtaat 169
|||||||||||||||||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtaat 3
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 80 atatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| |||| ||||||| |||| ||||||||||||||
Sbjct: 55 atatatatatatgtctagattcattagcatctatatgaatg 95
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%), Gaps = 4/53 (7%)
Strand = Plus / Minus
Query: 89 tatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaag 141
|||| ||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct: 79 tatgtctagattcattaacatctatatg----aatgtgggcaatgctagaaag 31
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 atatgtatgcctagatttattaacatctatatgaatg 120
|||| |||| ||||||| |||||||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatg 89
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%), Gaps = 4/69 (5%)
Strand = Plus / Minus
Query: 74 atctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatg 133
||||||| |||||||| |||||||||| |||| ||| ||||||||| |||||||||
Sbjct: 73 atctagacatatatgtgtgcctagattcattagcatagatatgaatg----tgggcaatg 18
Query: 134 ctagnaagt 142
|||| ||||
Sbjct: 17 ctagaaagt 9
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 107/133 (80%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 16 gtttcatattatanaactttttagcattacccatacattcatatatntatgttaatanat 75
||||||||||||| ||||| ||||||| |||| |||||||||| ||| |||| ||
Sbjct: 148 gtttcatattataagactttctagcattgccca--cattcatatag--atgctaatgaat 93
Query: 76 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 135
||||| |||||| | || ||| || |||||||||||||||| || |||||||||||
Sbjct: 92 ctagacatatatatgtgtataggttcattaacatctatatgattg----tgggcaatgct 37
Query: 136 agnaagttttata 148
|| |||| |||||
Sbjct: 36 agaaagtcttata 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 84 atatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagnaagtt 143
|||| |||| ||||||| |||| ||||||||||| |||||||||||||||| ||||
Sbjct: 79 atatatatgtctagattcattagcatctatatga----atgtgggcaatgctagaaagtc 134
Query: 144 ttata 148
|||||
Sbjct: 135 ttata 139
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 atatgtatgcctagatttattaacatctatatgaatg 120
|||| ||||| |||||| |||||||||||||||||||
Sbjct: 77 atatatatgcatagattcattaacatctatatgaatg 113
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| ||||||| ||||||| || ||| ||| ||||||||||||||||||
Sbjct: 104 atgttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaat 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 89 tatgcctagatttattaacatctatatgaat 119
|||| ||||||| ||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaat 119
|||||||| ||||||| ||||||| || ||| ||| ||||||||||||||||||
Sbjct: 104 atgttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaat 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 89 tatgcctagatttattaacatctatatgaatg 120
|||| ||||||| |||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaatg 115
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 75/90 (83%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 31 actttttagcattacccatacattcatatatntatgttaatanatctagatatatatgta 90
||||| |||||||||||| |||||||||| ||| ||||| ||||| ||||||| |
Sbjct: 30 actttatagcattaccca--cattcatatag--atgctaataaatctatatatataataa 85
Query: 91 tgcctagatttattaacatctatatgaatg 120
|| ||||||| |||| ||||||||||||||
Sbjct: 86 tgtctagattcattagcatctatatgaatg 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 95 tagatttattaacatctatatgaatg 120
||||||||||| ||||||||||||||
Sbjct: 73 tagatttattagcatctatatgaatg 48
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 118 atgaatgtgggcaatgctagnaagttttatancctgaaatggaggtagtaa 168
|||||||||||||||||||| |||| ||| | ||||||||||| |||||
Sbjct: 81 atgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagtaa 131
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%), Gaps = 4/73 (5%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||||||| |||| |||| ||||||| ||||||||| |||||||||
Sbjct: 104 atgttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatg--- 48
Query: 124 gtgggcaatgcta 136
|||| |||||||
Sbjct: 47 -tgggtaatgcta 36
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 50 acattcatatatntatgttaatanatctagatatatatgtatgcctagatttattaacat 109
|||||||||||| || |||||| ||||||||| |||| |||| ||||||| ||||| ||
Sbjct: 116 acattcatatat-ta-gttaatgaatctagatagatatatatgtctagattcattaatat 59
Query: 110 ctatatgaatg 120
| |||||||||
Sbjct: 58 caatatgaatg 48
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 118 atgaatgtgggcaatgctagnaagttttata 148
|||||||||||||||||||| |||| |||||
Sbjct: 54 atgaatgtgggcaatgctagaaagtcttata 24
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 16 gtttcatattatanaactttttagcattacccata 50
||||||||||||| ||||| ||||||||||||||
Sbjct: 104 gtttcatattataagactttctagcattacccata 70
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 118 atgaatgtgggcaatgctagnaagttttata 148
|||||||||||||||||||| |||| |||||
Sbjct: 79 atgaatgtgggcaatgctagaaagtcttata 109
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 16 gtttcatattatanaactttttagcattacccatacattcatatatntatgttaatanat 75
|||||| |||||| ||||| ||||||||||| ||||||||||| ||||||||| ||
Sbjct: 122 gtttcaaattataagactttctagcattaccc--acattcatata--tatgttaatgaat 67
Query: 76 ctagatatatat 87
||||| ||||||
Sbjct: 66 ctagacatatat 55
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 65/79 (82%), Gaps = 4/79 (5%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||| ||| ||| |||| ||||||| ||||||||||| |||||||
Sbjct: 104 atgttaatgaatctaaatacatacatatgtctagattcattaacatcta----aatgaat 49
Query: 124 gtgggcaatgctagnaagt 142
||||||||||||| ||||
Sbjct: 48 atgggcaatgctagaaagt 30
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 65/79 (82%), Gaps = 4/79 (5%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||||| |||||| | || |||||| ||||||||||| |||||||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatcta----aatgaat 49
Query: 124 gtgggcaatgctagnaagt 142
||||| |||||||| ||||
Sbjct: 48 gtgggtaatgctagaaagt 30
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 95 tagatttattaacatctatatgaatgaatgtgggcaatgctagnaagt 142
|||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 72 tagattcattaacatctat----atgaatgtgggcaatgctagaaagt 115
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 84/103 (81%), Gaps = 4/103 (3%)
Strand = Plus / Plus
Query: 16 gtttcatattatanaactttttagcattacccatacattcatatatntatgttaatanat 75
||||||||||||| ||||| || |||| |||| ||||||||||| |||| ||| ||
Sbjct: 15 gtttcatattataagactttctaacattgccca--cattcatatat--atgtcaatgaat 70
Query: 76 ctagatatatatgtatgcctagatttattaacatctatatgaa 118
||||| |||||| | || |||||| ||| |||||||||||||
Sbjct: 71 ctagacatatatatgtgtttagattcattgacatctatatgaa 113
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 75/93 (80%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 50 acattcatatatntatgttaatanatctagatatatatgtatgcctagatttattaacat 109
|||| ||||||| ||||||||| ||||| | | ||| |||| |||||| ||||||||
Sbjct: 118 acatacatatatatatgttaatgaatctaaacacatacatatgtttagattcattaacat 59
Query: 110 ctatatgaatgaatgtgggcaatgctagnaagt 142
||| |||||||||||| |||||||| ||||
Sbjct: 58 cta----aatgaatgtgggtaatgctagaaagt 30
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 94 ctagatttattaacatctatatgaatg 120
||||||| |||||||||||||||||||
Sbjct: 63 ctagattcattaacatctatatgaatg 89
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 94 ctagatttattaacatctatatgaatg 120
|||||||||||||||||||| ||||||
Sbjct: 74 ctagatttattaacatctatgtgaatg 48
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 atgaatgtgggcaatgctagnaagt 142
|||||||||||||||||||| ||||
Sbjct: 26 atgaatgtgggcaatgctagaaagt 2
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 94 ctagatttattaacatctatatgaat 119
||||||| ||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 atgaatgtgggcaatgctagnaagt 142
|||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 118 atgaatgtgggcaatgctagnaagtttta 146
||||||||||||||||||| ||||||||
Sbjct: 93 atgaatgtgggcaatgctaaaaagtttta 121
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 53/63 (84%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 58 atatntatgttaatanatctagatatatatgtatgcctagatttattaacatctatatga 117
|||| |||| ||||| | ||||| |||||| ||| |||||||||||| |||| ||||||
Sbjct: 43 atatatatgctaataaaactagacatatat--atgtctagatttattagcatcaatatga 100
Query: 118 atg 120
|||
Sbjct: 101 atg 103
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 tagatttattaacatctatatgaatg 120
|||||||||||||||||| |||||||
Sbjct: 56 tagatttattaacatctaaatgaatg 81
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 118 atgaatgtgggcaatgctagnaagt 142
|||||||||||||||||||| ||||
Sbjct: 77 atgaatgtgggcaatgctagaaagt 101
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 atgaatgtgggcaatgctagnaagt 142
|||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 118 atgaatgtgggcaatgctagnaagt 142
|||||||||||||||||||| ||||
Sbjct: 93 atgaatgtgggcaatgctagaaagt 117
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatg 120
|||||||| ||||||||||| | |||| |||||| |||| ||||||||||||||
Sbjct: 59 atgttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatg 115
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 95 tagatttattaacatctatatgaatg 120
|||||| |||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatg 48
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 86/108 (79%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||| ||||||| ||| ||||||| ||||||| ||| |||||||
Sbjct: 104 atgttaatgaatctaaatatatacacatgtctagattcattaacaacta----aatgaat 49
Query: 124 gtgggcaatgctagnaagttttatancctgaaatggaggtagtaataa 171
||||| |||||||| |||| ||| | ||||| ||||| ||||||||
Sbjct: 48 gtgggtaatgctagaaagtcttacattgtgaaacggaggaagtaataa 1
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 tagatttattaacatctatatgaatg 120
|||||| |||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatg 115
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 95 tagatttattaacatctatatgaatg 120
|||||| |||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatg 48
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 tagatttattaacatctatatgaatg 120
|||||| |||||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatg 117
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 ctagatttattaacatctatatgaat 119
||||||||||||||||| ||||||||
Sbjct: 67 ctagatttattaacatcaatatgaat 92
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%), Gaps = 4/74 (5%)
Strand = Plus / Minus
Query: 64 atgttaatanatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 123
|||||||| ||||| ||| |||| |||| ||||||| ||||||||| |||||||||
Sbjct: 78 atgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatg--- 22
Query: 124 gtgggcaatgctag 137
|||| ||||||||
Sbjct: 21 -tgggaaatgctag 9
