miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 194 bits (98), Expect = 3e-49
Identities = 129/138 (93%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| |||||||||||| |||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtt 63
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 64 aatgaatctagacatatatattcattaacatcaatatgaatgtgggaaatgctagaatga 123
Query: 131 cttaacattgcgaaacgg 148
||| |||||| |||||||
Sbjct: 124 ctt-acattgtgaaacgg 140
Score = 168 bits (85), Expect = 2e-41
Identities = 134/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||| ||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||| || | | || |||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 88 atgaatatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagtatata 160
|| |||||| |||||||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagtatata 1
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 172 bits (87), Expect = 1e-42
Identities = 130/142 (91%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatgaatc 78
|||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 79 tagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacat 138
||| || || ||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 72 tag--atgtagattcattaatatcaatataaatatggaaaatgctagaatgactt-acat 128
Query: 139 tgcgaaacggaggaagtatata 160
|| |||||||||| ||||||||
Sbjct: 129 tgtgaaacggagggagtatata 150
Score = 151 bits (76), Expect = 4e-36
Identities = 131/147 (89%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||||||| |||| || |||||||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatt 88
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||| |||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 87 aatgaatct--acatctagattcattaacatcaatatgaatgtgagaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagtat 157
||| |||||| |||||||| |||||||
Sbjct: 29 ctt-acattgtgaaacggaagaagtat 4
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 170 bits (86), Expect = 4e-42
Identities = 133/146 (91%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 72 atgaatcta-gacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||| ||| | || ||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 89 atgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| ||||| |||||||||||||||
Sbjct: 29 ctt-acattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 126/146 (86%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatcta-gacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||| | | ||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct: 65 atgaatctatgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaatga 124
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| ||||| |||| ||||
Sbjct: 125 ctt-acattgtgaaaccgagggagta 149
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 170 bits (86), Expect = 4e-42
Identities = 132/145 (91%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 86 atgaaactagac--atagattcattaacatcaatatgaatgtggaaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||||||||
Sbjct: 28 tt-acattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 125/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||| | | || ||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 65 atgaatct--atgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgac 122
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| ||||| |||| ||||
Sbjct: 123 tt-acattgtgaaaccgagggagta 146
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 170 bits (86), Expect = 4e-42
Identities = 133/146 (91%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 72 atgaatctagaca-tatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||||| | || |||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 89 atgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||||||||
Sbjct: 29 ctt-acattgtgaaacggaggaagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 133/146 (91%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagaca-tatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||||||| | || |||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 65 atgaatctagacattctagattcattaacatcaatatgaatgtgggaaatgctagaatga 124
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 125 ctt-acattgtgaaacggagggagta 149
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 138/156 (88%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtt 100
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaat 40
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||| |||||| |||||||||||||||
Sbjct: 39 gctagaatgactt-acattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 132/158 (83%), Gaps = 11/158 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| ||||||||||| |||||| ||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||||||||| |||||| |||||||||| |||||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagtatat 161
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 167 bits (84), Expect = 6e-41
Identities = 139/157 (88%), Gaps = 9/157 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||| | |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 72 atgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgct 123
|||||||||||||||||| |||||||||||||||||| ||||| |||||||||
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 124 agaatgacttaacattgcgaaacggaggaagtatata 160
|||||||||| |||||| | |||||||||||||||||
Sbjct: 36 agaatgactt-acattgtggaacggaggaagtatata 1
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||| | |||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 4 atacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtt 63
Query: 71 aatgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgc 122
||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 64 aatgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgc 123
Query: 123 tagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| | |||||||| ||||
Sbjct: 124 tagaatgactt-acattgtggaacggagggagta 156
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 165 bits (83), Expect = 2e-40
Identities = 129/142 (90%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 19 tccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatgaatc 78
|||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 79 tagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacat 138
||| || || ||||||||| |||||||||||| |||||||||||| |||||||| ||||
Sbjct: 72 tag--atgtagattcattaatatcaatataaatatggaaaatgctataatgactt-acat 128
Query: 139 tgcgaaacggaggaagtatata 160
|| |||||||||| ||||||||
Sbjct: 129 tgtgaaacggagggagtatata 150
Score = 143 bits (72), Expect = 9e-34
Identities = 130/147 (88%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||| ||| |||| || |||||||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatt 88
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||| |||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 87 aatgaatct--acatctagattcattaacatcaatatgaatgtgagaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagtat 157
||| |||||| |||||||| |||||||
Sbjct: 29 ctt-acattgtgaaacggaagaagtat 4
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 161 bits (81), Expect = 4e-39
Identities = 133/148 (89%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||| |||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||
Sbjct: 64 aatgtatctag--atatagatacattaacatcaatatgaatgtgggaaatgctagaatga 121
Query: 131 cttaacattgcgaaacggaggaagtata 158
||| |||||| | |||||||||||||||
Sbjct: 122 ctt-acattgtggaacggaggaagtata 148
Score = 147 bits (74), Expect = 6e-35
Identities = 132/149 (88%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||| | |||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 147 atacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||| |||| | || || || ||||||||||||||| ||||||||||||||||||||||
Sbjct: 87 aatgtatct--atatctagatacattaacatcaatatgaatgtggaaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagtatat 159
||| |||||| |||||||||| |||||||
Sbjct: 29 ctt-acattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 159 bits (80), Expect = 1e-38
Identities = 133/149 (89%), Gaps = 5/149 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||||| ||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 72 atgaatctagacatatat----attcattaacatcaatataaatgtggaaaatgctagaa 127
|||||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||
Sbjct: 92 atgaatctagacatatatctagattcattagcatcaatatgaatgtgggaaatgctagaa 33
Query: 128 tgacttaacattgcgaaacggaggaagta 156
|||||| |||||| |||||||||||||||
Sbjct: 32 tgactt-acattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 129/149 (86%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 72 atgaatctagacata----tatattcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||| ||| || |||||||| ||||||||| ||||| | |||||||||||
Sbjct: 65 atgaatctagatatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaa 124
Query: 128 tgacttaacattgcgaaacggaggaagta 156
|||||| | |||| |||||||||| ||||
Sbjct: 125 tgactt-atattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 157 bits (79), Expect = 6e-38
Identities = 131/146 (89%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgct 63
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||||| || || |||||||| ||||||||| ||||| ||||||||||||||||
Sbjct: 64 aatgaatctag--atctaaattcattagcatcaatatgaatgtagaaaatgctagaatga 121
Query: 131 cttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 122 -tttacattgtgaaacggagggagta 146
Score = 121 bits (61), Expect = 3e-27
Identities = 128/148 (86%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||| ||| || || |||||||| ||||||||||||| || ||||| ||||||||||
Sbjct: 86 atgaatttag--atctagattcattagcatcaatataaatatgaaaaatactagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagtatat 159
|| |||||| |||||||||| |||||||
Sbjct: 28 tt-acattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 72 atgaatctagacata---------tatattcattaacatcaatataaatgtggaaaatgc 122
||||||||| ||||| || |||||||||||||||||| ||||||| ||||||
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 123 tagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||||||||
Sbjct: 37 tagaatgactt-acattgtgaaacggaggaagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 134/154 (87%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctag-acata--------tatattcattaacatcaatataaatgtggaaaatgc 122
|||||||||| ||||| || |||||||||||||||||| ||||||| ||||||
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 123 tagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||| ||||
Sbjct: 125 tagaatgactt-acattgtgaaacggagggagta 157
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 155 bits (78), Expect = 2e-37
Identities = 126/140 (90%), Gaps = 4/140 (2%)
Strand = Plus / Plus
Query: 17 cctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatgaa 76
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 77 tctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaac 136
||||| | || |||||||||||||||||| ||| ||||||||||||||||||||| ||
Sbjct: 70 tctag---tctagattcattaacatcaatatgaatatggaaaatgctagaatgactt-ac 125
Query: 137 attgcgaaacggaggaagta 156
|||| |||||||||| ||||
Sbjct: 126 attgtgaaacggagggagta 145
Score = 147 bits (74), Expect = 6e-35
Identities = 128/144 (88%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||||| || ||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 85 atgaatctagac---tagatttattaacatcaatataaatgtgagaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagt 155
|| ||||| ||||||||||||||
Sbjct: 28 tt-acattatgaaacggaggaagt 6
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 151 bits (76), Expect = 4e-36
Identities = 136/154 (88%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctaga----catat----atattcattaacatcaatataaatgtggaaaatgct 123
||||||||||| ||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 65 atgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgct 124
Query: 124 agaatgacttaacattgcgaaacggaggaagtat 157
|||||||||| | |||| ||||||||||||||||
Sbjct: 125 agaatgactt-atattgtgaaacggaggaagtat 157
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||| ||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 71 aatgaatctagacata--------tatattcattaacatcaatataaatgtggaaaatgc 122
||||||||| |||||| || |||||||||||||||||| ||||||| ||||||
Sbjct: 97 aatgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 123 tagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||| ||||
Sbjct: 37 tagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 149 bits (75), Expect = 1e-35
Identities = 132/149 (88%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||| |||||||||||| |||||| |||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtt 63
Query: 71 aatgaatctagacatatata---ttcattaacatcaatataaatgtggaaaatgctagaa 127
|||||| ||| | ||| || ||||||||||||||||||||||||| |||| ||||||
Sbjct: 64 aatgaaactacatctatttaagtttcattaacatcaatataaatgtgggaaatactagaa 123
Query: 128 tgacttaacattgcgaaacggaggaagta 156
|||||| |||||| |||||||||||||||
Sbjct: 124 tgactt-acattgtgaaacggaggaagta 151
Score = 127 bits (64), Expect = 5e-29
Identities = 130/150 (86%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 72 atgaatct---agacatatatattcattaacatcaatataaatgtggaaaatgctagaat 128
||||| || | | || || ||||||||||||||||| ||||||| |||| ||||||
Sbjct: 91 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 32
Query: 129 gacttaacattgcgaaacggaggaagtata 158
||||| | |||| |||||||||| ||||||
Sbjct: 31 gactt-atattgtgaaacggagggagtata 3
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 149 bits (75), Expect = 1e-35
Identities = 129/146 (88%), Gaps = 7/146 (4%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||| |||| |||| |||||||||| ||| ||| |||||||||||||||
Sbjct: 65 atgaatctag------atatccattgacatcaatatgaatatgggaaatgctagaatgac 118
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| |||||| ||||||||||||||||
Sbjct: 119 tt-acattgtgaaacggaggaagtat 143
Score = 101 bits (51), Expect = 3e-21
Identities = 123/146 (84%), Gaps = 7/146 (4%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| || ||| ||||||||||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtc 84
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||| || || || ||||||||| |||||||| |||||| ||||||||||||||
Sbjct: 83 aatg------gatatctagattcattaatatcaatatgaatgtgagaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 29 ctt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 147 bits (74), Expect = 6e-35
Identities = 133/151 (88%), Gaps = 5/151 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 72 atgaatctagaca----tatatattcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| | || ||||||| |||||||||| ||||||| ||||| |||||
Sbjct: 92 atgaatctagacagatgtctagattcattgacatcaatatgaatgtgggaaatgatagaa 33
Query: 128 tgacttaacattgcgaaacggaggaagtata 158
|||||| |||||| |||||||||||||||||
Sbjct: 32 tgactt-acattgtgaaacggaggaagtata 3
Score = 129 bits (65), Expect = 1e-29
Identities = 130/150 (86%), Gaps = 5/150 (3%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtc 63
Query: 71 aatgaatctagaca----tatatattcattaacatcaatataaatgtggaaaatgctaga 126
|||||||||||||| | || ||||||| |||||||||| ||||||| ||||||||||
Sbjct: 64 aatgaatctagacatctgtctagattcattgacatcaatatgaatgtgggaaatgctaga 123
Query: 127 atgacttaacattgcgaaacggaggaagta 156
||||||| ||||| |||||||||| ||||
Sbjct: 124 atgactt-acattatgaaacggagggagta 152
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 134/155 (86%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||||||| |||| ||| ||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||||||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 129/155 (83%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||| | || ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 72 atgaatcta----gacatatat------attcattaacatcaatataaatgtggaaaatg 121
||||||||| || |||||| |||||||||||| ||||| |||||| |||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 134/155 (86%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||| |||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||||||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggaggaagta 158
Score = 135 bits (68), Expect = 2e-31
Identities = 133/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 72 atgaatctagaca----------tatatattcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||||||||||||| ||| |||||||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 134/155 (86%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| |||||| |||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||| ||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggagggagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 133/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||||||||||||| ||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||||||||
Sbjct: 125 ttagaatgactt-acattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 134/155 (86%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ttagaatgactt-acattgtgaaacggagggagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| |||| |||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 72 atgaatc----tagacatatat------attcattaacatcaatataaatgtggaaaatg 121
||||||| |||| |||||| |||||||||||||| ||| ||||||| |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 141 bits (71), Expect = 3e-33
Identities = 129/146 (88%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||| ||||||| |||| ||||||| ||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgct 63
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||||| || || |||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 64 aatgaatctag--atctaaattcattagcatcaatataaatgtagaaaatgctaaaatga 121
Query: 131 cttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 122 -tttacattgtgaaacggagggagta 146
Score = 121 bits (61), Expect = 3e-27
Identities = 128/148 (86%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| ||||| ||| |||| ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||| ||| || || |||||||| ||||||||| |||||| ||||||||||||| ||
Sbjct: 86 atgaatttag--atctagattcattagcatcaatatgaatgtgaaaaatgctagaataac 29
Query: 132 ttaacattgcgaaacggaggaagtatat 159
|| |||||| |||||||||| |||||||
Sbjct: 28 tt-acattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 141 bits (71), Expect = 3e-33
Identities = 127/145 (87%), Gaps = 8/145 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||| | |||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 81 atgaatc-------aatgattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 124/145 (85%), Gaps = 8/145 (5%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 65 atgaatc-------attgattcattaacatcaatatgaatgtgagaaatgctagaatgaa 117
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 118 tt-acattgtgaaacggagggagta 141
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 141 bits (71), Expect = 3e-33
Identities = 128/145 (88%), Gaps = 4/145 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| |||||||| | || ||| || ||||||||| ||||||| |||||||| ||||||
Sbjct: 85 ataaatctagatagatctat---ctatcatcaatatgaatgtgggaaatgctaaaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/146 (84%), Gaps = 6/146 (4%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| ||||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 72 -atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|| ||||| | || ||| |||||||||||||||||| || ||||||||||||||
Sbjct: 65 gatagatcta----tctagatttattaacatcaatataaatatgagaaatgctagaatga 120
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 121 ctt-acattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 141 bits (71), Expect = 3e-33
Identities = 134/155 (86%), Gaps = 10/155 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 72 atgaatctagacatatat---------attcattaacatcaatataaatgtggaaaatgc 122
||||||||||| |||||| |||||||| ||||||||| |||||| ||||||
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 123 tagaatgacttaacattgcgaaacggaggaagtat 157
||||||||||| |||||||||||||||||||||||
Sbjct: 37 tagaatgactt-acattgcgaaacggaggaagtat 4
Score = 135 bits (68), Expect = 2e-31
Identities = 136/157 (86%), Gaps = 10/157 (6%)
Strand = Plus / Plus
Query: 9 agatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2 agatacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatg 61
Query: 69 ttaatgaatctaga---catatat------attcattaacatcaatataaatgtggaaaa 119
||||||||||||| |||||| |||||||||||| ||||||||| ||| |||
Sbjct: 62 gtaatgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaa 121
Query: 120 tgctagaatgacttaacattgcgaaacggaggaagta 156
|| ||||||||||| |||||| |||||||||| ||||
Sbjct: 122 tgttagaatgactt-acattgtgaaacggagggagta 157
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 116/133 (87%), Gaps = 10/133 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||| |||||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 122 ctagaatgactta 134
|||||||||||||
Sbjct: 125 ctagaatgactta 137
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||| | |||| ||||||||||||| |||| ||||||| |||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 72 atgaatcta----gacatatat------attcattaacatcaatataaatgtggaaaatg 121
||||||||| || |||||| ||||||||||| |||||||||||||| |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 134/156 (85%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||| ||||| || ||||| |||||||||||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
||| |||||||| |||||| |||||||||| |||||
Sbjct: 38 ctataatgactt-acattgtgaaacggagggagtat 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||| ||| |||| |||||| ||||| || ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 71 aatgaatctag----acatatat------attcattaacatcaatataaatgtggaaaat 120
||| ||| ||| | |||||| |||||||||||||||||| ||||||| ||||
Sbjct: 64 aataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaat 123
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||| |||||| |||||||||| ||||
Sbjct: 124 gctagaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 137 bits (69), Expect = 5e-32
Identities = 131/150 (87%), Gaps = 5/150 (3%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||| ||||||||| ||| |||| |||||||||||||||| |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 71 aatgaatctagacatatat----attcattaacatcaatataaatgtggaaaatgctaga 126
|||||||||||| |||||| |||||||| ||||||| |||||||| |||||||| |
Sbjct: 93 aatgaatctagagatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaa 34
Query: 127 atgacttaacattgcgaaacggaggaagta 156
||||||| |||||| |||||||||||||||
Sbjct: 33 atgactt-acattgtgaaacggaggaagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 131/150 (87%), Gaps = 5/150 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| |||||||||||||| ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 72 atgaatctagacata----tatattcattaacatcaatataaatgtggaaaatgctagaa 127
|||||| |||| ||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 65 atgaatttagatatatctctagattcattagcatcaatataaatgtggaaaatgctaaaa 124
Query: 128 tgacttaacattgcgaaacggaggaagtat 157
|||||| | |||| |||||||||| |||||
Sbjct: 125 tgactt-atattgtgaaacggagggagtat 153
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 137 bits (69), Expect = 5e-32
Identities = 127/146 (86%), Gaps = 9/146 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||| |||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 65 atgaatctag--------attcattaacatcaatatgaatatgggaaatgctagaatgac 116
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| ||||| ||||||||||||||||
Sbjct: 117 tt-acattatgaaacggaggaagtat 141
Score = 121 bits (61), Expect = 3e-27
Identities = 125/146 (85%), Gaps = 9/146 (6%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||||||||||| ||||| || ||| |||||||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 81 aatgaatctag--------attcattaacatcaatatgaatatgggaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 29 ctt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 137 bits (69), Expect = 5e-32
Identities = 128/145 (88%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||||| | || ||||||||||||||||||||| |||| ||| ||||||
Sbjct: 87 atgaatctagaca-acattaatattaacatcaatataaatgtgacaaatactaaaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| ||||| |||| ||||
Sbjct: 28 tt-acattgtgaaacagagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/147 (85%), Gaps = 6/147 (4%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 72 --atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatg 129
|| ||| | | | || |||||||||||||||||| |||||| |||| ||| ||||
Sbjct: 65 atattaatgttg---tctagattcattaacatcaatatgaatgtgagaaatactaaaatg 121
Query: 130 acttaacattgcgaaacggaggaagta 156
|||| |||||| |||||||||| ||||
Sbjct: 122 actt-acattgtgaaacggagggagta 147
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 134/156 (85%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||| |||||||||| | | ||||| ||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
|||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 64 tatgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaat 123
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
|||| |||||||| || ||| |||||||||||||||
Sbjct: 124 gctaaaatgactt-actttgtgaaacggaggaagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 134/159 (84%), Gaps = 11/159 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||| |||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 72 atgaatc----tagacatatat------attcattaacatcaatataaatgtggaaaatg 121
||||||| |||| |||||| |||||| ||||||||||||||||||| |||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtatata 160
| | |||||||| || ||| |||||||||| ||||||||
Sbjct: 38 caaaaatgactt-actttgtgaaacggagggagtatata 1
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 135 bits (68), Expect = 2e-31
Identities = 126/145 (86%), Gaps = 9/145 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||||||||||| |||||||||| |||| ||||||||||||||||
Sbjct: 65 atgaatctagacatatat--------acatcaatatgtatgtacaaaatgctagaatgac 116
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 117 tt-acattgtgaaacggaggaagta 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgactt-acattgtgaaacgga 12
Query: 150 ggaagta 156
|| ||||
Sbjct: 11 ggtagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 135 bits (68), Expect = 2e-31
Identities = 127/145 (87%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| ||||||||||||||||||||||| |||||| ||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| |||||||| |||||| |||||||||| ||| |||||| ||||||||||||||||
Sbjct: 84 ataaatctagatatatat----attaacatcactatgaatgtgaaaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||||||||
Sbjct: 28 tt-acattatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 102/123 (82%), Gaps = 4/123 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| |||| ||||||| ||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtt- 63
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||| || | || || ||| |||||||||| ||| ||||||| |||| ||||||||||
Sbjct: 64 ---aatatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgac 120
Query: 132 tta 134
|||
Sbjct: 121 tta 123
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 135 bits (68), Expect = 2e-31
Identities = 126/145 (86%), Gaps = 9/145 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||| |||| |||||||| ||||| ||||||| |||||||||||||||
Sbjct: 80 atgaatctatacat--------attaacattaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 122/145 (84%), Gaps = 9/145 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| | |||| |||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 65 at--------atgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgac 116
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| |||||||||| ||||
Sbjct: 117 tt-atattgtgaaacggagggagta 140
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 133 bits (67), Expect = 8e-31
Identities = 127/145 (87%), Gaps = 4/145 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||||||||||||| || | || ||| ||||||| |||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagat---tatgaatgtgggaaatgctagaatgac 121
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| ||||||||||||||
Sbjct: 122 tt-acattgtaaaacggaggaagta 145
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatatgagaaatgctagaatgactt-acattatgaaacgga 12
Query: 150 ggaagta 156
|| ||||
Sbjct: 11 gggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatt 58
|||| ||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacatt 99
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 134/157 (85%), Gaps = 11/157 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||| || | ||| ||||||| |||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtata 158
|||||||||||| |||||| |||||||||||||||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggaggaagtata 3
Score = 87.7 bits (44), Expect = 4e-17
Identities = 129/156 (82%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| |||||| ||| | || ||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatt 63
Query: 71 aatgaatctagac--atatat--------attcattaacatcaatataaatgtggaaaat 120
||||||||||||| |||||| |||||||| ||||||||| ||||| ||||
Sbjct: 64 aatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaat 123
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
|||| |||||||| |||||| |||||||||| ||||
Sbjct: 124 gctaaaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 133/155 (85%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||| || ||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||| ||||||||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 123 ctagaatgactt-acattgtgaaacggagggagta 156
Score = 111 bits (56), Expect = 3e-24
Identities = 132/155 (85%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatt--tcacatttatattgatgtta 99
Query: 72 atgaatc----tagacatatat------attcattaacatcaatataaatgtggaaaatg 121
|| |||| |||| |||||| |||||||||||||||||| ||| ||| |||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|| ||||||||| |||||| |||||||||| ||||
Sbjct: 38 cttgaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 133/156 (85%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| |||| | ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 72 atgaatctagacatatatat----------tcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||| |||||| ||||||||||||||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggaggaagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 128/156 (82%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
||||| |||||| | |||| |||||||| ||||||||| ||| | ||||||
Sbjct: 64 aatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaat 123
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||| | |||| |||||||||| ||||
Sbjct: 124 gctagaatgactt-atattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 133/155 (85%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||| || ||||| || ||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||| ||||||||||||||||||||| |||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggagggagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 132/155 (85%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt--tcacatttatattgatgtta 62
Query: 72 atgaatc----tagacatatat------attcattaacatcaatataaatgtggaaaatg 121
|| |||| |||| |||||| |||||||||||||||||| ||| ||| |||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|| ||||||||| |||||| |||||||||| ||||
Sbjct: 123 cttgaatgactt-acattgtgaaacggagggagta 156
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 133/156 (85%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||| |||| |||||||| |||| ||||||||||||||||| |
Sbjct: 159 atactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgat 100
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
||||||||||||||||||| |||||||||||| ||||| ||||||| ||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaat 40
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
|||| |||||||| | |||| |||||||||||||||
Sbjct: 39 gctacaatgactt-atattgtgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/157 (82%), Gaps = 11/157 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||| ||| ||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtata 158
|||||||| ||| | |||| |||||||||| ||||||
Sbjct: 125 ctagaatggctt-atattgtgaaacggagggagtata 160
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 127 bits (64), Expect = 5e-29
Identities = 125/145 (86%), Gaps = 9/145 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| |||| |||||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||| |||| |||||||| ||||| ||||||| |||||||||||||||
Sbjct: 80 atgaatctatacat--------attaacattaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 123/145 (84%), Gaps = 9/145 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| | |||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 at--------atgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgac 116
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| |||||||||| ||||
Sbjct: 117 tt-atattgtgaaacggagggagta 140
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||||||||| || |||||||||||||||||| ||||| |||||| |||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
| | |||||||| |||||| |||||||||||||||
Sbjct: 38 caaaaatgactt-acattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| | | ||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| || ||||||| ||||
Sbjct: 125 ctagaatgactt-acattgtgatacggagggagta 158
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||| ||| ||||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| |||||| |||||||||| ||||||| ||||||| |||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||||||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 72 atgaatctagacatatatat 91
||||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 127 bits (64), Expect = 5e-29
Identities = 126/145 (86%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| ||||||||| | |||||| ||||||||||| ||||||| ||||||||||||| |
Sbjct: 84 ataaatctagac----aaattcatgaacatcaatatgaatgtgggaaatgctagaatggc 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 28 tt-acattgtgaaacggagggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 125/145 (86%), Gaps = 5/145 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| |||||||| ||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||| | | || ||| || ||||||||||| ||||||| |||||||||||||||
Sbjct: 65 atgaattt----gtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgac 120
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 121 tt-acattgtgaaacggaggaagta 144
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| ||||||||| |||||||| ||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||| ||||
Sbjct: 38 ttagaatgactt-acattgtgaaacggagggagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||| |||||||| |||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||| ||||| |||||||| |||| |||| |||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||| | |||||| |||||||||||||||
Sbjct: 38 ctagaatgacat-acattgtgaaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 130/155 (83%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||| |||||||||| ||| |||||| |||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 72 atgaatctagacatatatat----------tcattaacatcaatataaatgtggaaaatg 121
|||||||||| ||||||||| |||||||||||||||| |||||||||||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/155 (85%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||| ||| ||| | |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||| |||||||| | |||| |||||||||||||||
Sbjct: 125 ctaaaatgactt-atattgtgaaacggaggaagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||| ||| ||||| |||||| ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||||||||||||| ||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||| |||||||| |||||| |||||||||| ||||
Sbjct: 38 ctataatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 125 bits (63), Expect = 2e-28
Identities = 93/102 (91%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 33 taagtcattctagtatttctcacatttatattgatgttaatgaatctagacatatatatt 92
||||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacat--atatt 47
Query: 93 cattaacatcaatataaatgtggaaaatgctagaatgactta 134
||||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 46 cattagcatcaatatgaatgtgagaaatgctagaatgactta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 92/106 (86%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 29 aatgtaagtcattctagtatttctcacatttatattgatgttaatgaatctagacatata 88
||||||||||||||||| |||||||||||| ||||||||| ||||||| || | | ||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaa--tatatgtcta 58
Query: 89 tattcattaacatcaatataaatgtggaaaatgctagaatgactta 134
|||||||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 59 gattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 123 bits (62), Expect = 8e-28
Identities = 128/150 (85%), Gaps = 10/150 (6%)
Strand = Plus / Plus
Query: 8 aagatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
|||||||| |||||||||| |||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 1 aagatacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Query: 68 gttaatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaa 127
| ||||||||||||||||| || ||||||||| |||||||||||||||| ||
Sbjct: 61 gctaatgaatctagacata---------tagcatcaatatgaatgtggaaaatgctaaaa 111
Query: 128 tgacttaacattgcgaaacggaggaagtat 157
|||||| | |||| |||||||||| |||||
Sbjct: 112 tgactt-atattgtgaaacggagggagtat 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||| ||||||||||||| || |||||||| |||||||| |||||| ||||||||
Sbjct: 70 attcattagcatcaatataaatatgagaaatgctaaaatgactt-acattgtgaaacgga 12
Query: 150 ggaagtat 157
||||||||
Sbjct: 11 ggaagtat 4
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 123 bits (62), Expect = 8e-28
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||| || ||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||| || || |||||||||||||||||| ||| | | |||||||||||||||
Sbjct: 65 atgaatctag--atctagattcattaacatcaatatgaatatagtaaatgctagaatgac 122
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| | |||||||||||||
Sbjct: 123 tt-atattgtggaacggaggaagta 146
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||| | |||| ||||||||||||| |||| | ||| ||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||| | || |||||||||||||||||| ||||||| ||||| || ||||||
Sbjct: 86 atgaatctaga--tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||| ||||
Sbjct: 28 tt-acattatgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 123 bits (62), Expect = 8e-28
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||| || ||||| |||||| ||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||| || || |||||||||||||||||| ||| | | |||||||||||||||
Sbjct: 86 atgaatctag--atctagattcattaacatcaatatgaatatagtaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| | |||||||||||||
Sbjct: 28 tt-atattgtggaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||| | |||| ||||||||||||| |||| | ||| ||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||| | || |||||||||||||||||| ||||||| ||||| || ||||||
Sbjct: 65 atgaatctaga--tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgac 122
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||| ||||
Sbjct: 123 tt-acattatgaaacggagggagta 146
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 126/146 (86%), Gaps = 10/146 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| || ||| ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||||| | |||||||||||| |||| ||| |||||||||||||||
Sbjct: 79 atgaatctagaca---agattcattaacatgaata------tgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| ||||| ||||||||||||||||
Sbjct: 28 tt-acattatgaaacggaggaagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/146 (83%), Gaps = 10/146 (6%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||||||||||| ||||| || |||| |||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagcatttccca------tattcatgtt 57
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||| | | || |||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 58 aatgaatcttgtc---tagattcattaacatcaatatgaatatgggaaatgctagaatga 114
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 115 ctt-acattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| ||||||| ||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 72 atgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgct 123
||||||||||| |||||| |||||||||||| | ||| ||||||| ||||||
Sbjct: 96 atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37
Query: 124 agaatgacttaacattgcgaaacggaggaagtat 157
|||||||||| | |||| ||||||||||||||||
Sbjct: 36 agaatgactt-atattgtgaaacggaggaagtat 4
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||| ||||||||||| | ||||| |||||| ||| | |||||
Sbjct: 4 atacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtt 63
Query: 71 aatgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgc 122
||||||| ||||||||||| |||||||||||| | ||| |||||| |||||||
Sbjct: 64 aatgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgc 123
Query: 123 tagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||| ||||
Sbjct: 124 tagaatgactt-acattgtgaaacggagggagta 156
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| |||||||||||||| |||||| |||||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 71 aatgaatctagacatatatat 91
|||||||||||||||||||||
Sbjct: 99 aatgaatctagacatatatat 79
Score = 91.7 bits (46), Expect = 3e-18
Identities = 131/157 (83%), Gaps = 13/157 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcac-atttatattgatgtt 70
||||||||||||||| ||||||||||||||||||||||| |||| | |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt-tcactagaaatattgatgtt 63
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
|||||||||||| | |||| ||||||||| |||||||| ||||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 121 gctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||| ||| |||||| |||||||||| |||||
Sbjct: 124 actagaatgtctt-acattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 158 atactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 71 aatgaatctagacatatatat 91
|||||||||||||||||||||
Sbjct: 98 aatgaatctagacatatatat 78
Score = 117 bits (59), Expect = 5e-26
Identities = 137/162 (84%), Gaps = 12/162 (7%)
Strand = Plus / Plus
Query: 9 agatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
||||||||||||||||| |||||||||| |||||||| |||| |||||| ||||||||
Sbjct: 2 agatactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgata 60
Query: 69 ttaatgaatctagacatatat----------attcattaacatcaatataaatgtggaaa 118
|||||||||||||| | |||| |||||||||||||||||| ||||||||||
Sbjct: 61 ttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaa 120
Query: 119 atgctagaatgacttaacattgcgaaacggaggaagtatata 160
|| ||||||||||| |||||| |||||||||| ||||||||
Sbjct: 121 atattagaatgactt-acattgtgaaacggagggagtatata 161
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 126/146 (86%), Gaps = 10/146 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||||| | |||||||||||| |||| ||| |||||||||||||||
Sbjct: 65 atgaatctagaca---agattcattaacatgaata------tgggaaatgctagaatgac 115
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| ||||| ||||||||||||||||
Sbjct: 116 tt-acattatgaaacggaggaagtat 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/146 (83%), Gaps = 10/146 (6%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||||||||||| ||||| || |||| |||||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatttccca------tattcatgtt 87
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||||||||| | | || |||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 86 aatgaatcttgtc---tagattcattaacatcaatatgaatatgggaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 29 ctt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 9 agatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 agatacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatg 61
Query: 69 ttaatgaatctagacatatat 89
|||||||||||||||| ||||
Sbjct: 62 ttaatgaatctagacaaatat 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| |||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatactagaatgactt-acattatgaaacgga 12
Query: 150 ggaagtat 157
||||||||
Sbjct: 11 ggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatatt 64
|||||||||| |||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 131/155 (84%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||||| |||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| |||||| |||||||||||| ||||| ||||||||||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| | |||| |||||||||||||||
Sbjct: 38 ttagaatgactt-atattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/155 (81%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| |||||||||||| ||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 72 atgaatctagacatatatat----------tcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||||| ||||||| |||||||| ||||||| |||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| | |||| |||||||||| ||||
Sbjct: 125 ctagaatgactt-atattgtgaaacggagggagta 158
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 119 bits (60), Expect = 1e-26
Identities = 122/141 (86%), Gaps = 10/141 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||| ||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 72 atgaatctagacata--tatattcattaacatcaatataaatgtggaaaatgctagaatg 129
||||||||| ||||| || |||||||||||||||||| |||||||||||||||
Sbjct: 65 atgaatctaaacatatctagattcattaacatcaatat-------gaaaatgctagaatg 117
Query: 130 acttaacattgcgaaacggag 150
|||| |||||| |||||||||
Sbjct: 118 actt-acattgtgaaacggag 137
Score = 103 bits (52), Expect = 7e-22
Identities = 120/141 (85%), Gaps = 10/141 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||| ||||||||| |||||||||||||||||| |||| | ||||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgtta 91
Query: 72 atgaatctagacatatata--ttcattaacatcaatataaatgtggaaaatgctagaatg 129
||||||||||| || | || ||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 90 atgaatctagatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatg 31
Query: 130 acttaacattgcgaaacggag 150
|||| |||||| |||||||||
Sbjct: 30 actt-acattgtgaaacggag 11
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 72 atgaatctagacatatatat 91
||||||||||||||||||||
Sbjct: 102 atgaatctagacatatatat 83
Score = 85.7 bits (43), Expect = 2e-16
Identities = 130/159 (81%), Gaps = 15/159 (9%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat----tgat 67
|||| |||||||||| |||||||||||||||||| ||||| || ||| ||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 68 gttaatgaatctagacatatatat----------tcattaacatcaatataaatgtggaa 117
||||||||||||||| | |||||| |||||||||||| ||| ||||||| |
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 118 aatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||||||| |||||| |||||||||| ||||
Sbjct: 125 aatgctagaatgactt-acattgtgaaacggagggagta 162
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 131/155 (84%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||||| ||||| ||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||| |||||||| |||||| |||||||||||||||
Sbjct: 38 ctaaaatgactt-acattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 129/155 (83%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| ||||| |||||| ||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||||||| ||||| |||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 75 aatctagacatatat 89
|||||||||||||||
Sbjct: 95 aatctagacatatat 81
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/147 (82%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| |||||||||||||||||| || ||||||||| ||||||| | ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 75 aatctagacata----------tatattcattaacatcaatataaatgtggaaaatgcta 124
|||||||||||| || ||||||| |||||||||| |||||| ||||||||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 125 gaatgacttaacattgcgaaacggagg 151
||||||||| |||||| ||||||||||
Sbjct: 128 gaatgactt-acattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 117/137 (85%), Gaps = 11/137 (8%)
Strand = Plus / Minus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| |||||||||||||||||| |||||||||||| ||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 75 aatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgactta 134
||||||||||||| |||||||||| |||||| |||||||||||||||||
Sbjct: 75 aatctagacatat----------acatcaatatgaatgtgagaaatgctagaatgactt- 27
Query: 135 acattgcgaaacggagg 151
|||||| ||||||||||
Sbjct: 26 acattgtgaaacggagg 10
Score = 89.7 bits (45), Expect = 1e-17
Identities = 115/137 (83%), Gaps = 11/137 (8%)
Strand = Plus / Plus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| |||||||||||||||||| |||||||||||| |||||||||| |||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatg 67
Query: 75 aatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgactta 134
||||| ||||||| |||| ||||| |||||| |||||||||||||||||
Sbjct: 68 --tctag--------attcattgacataaatatgaatgtgagaaatgctagaatgactt- 116
Query: 135 acattgcgaaacggagg 151
|||||| ||||||||||
Sbjct: 117 acattgtgaaacggagg 133
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 115 bits (58), Expect = 2e-25
Identities = 123/146 (84%), Gaps = 14/146 (9%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||| |||||||||||| ||||| |||||| |||||||||||
Sbjct: 136 atactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtt 77
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 76 aatgaatctaga-------------taacatcaatatgaatgtggaaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| | |||| |||||||||||||||
Sbjct: 29 ctt-atattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 120/147 (81%), Gaps = 14/147 (9%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||| ||||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 65 -----tctaga--------ttcattaacatcaatatgaatgtgggaaatgttagaatgac 111
Query: 132 ttaacattgcgaaacggaggaagtata 158
|| | |||| |||||||||| ||||||
Sbjct: 112 tt-atattgtgaaacggagggagtata 137
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| |||||||||| |||| |||||| |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||| |||||| ||||||||||||||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggaggaagtat 159
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/156 (82%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| |||||||||||| |||| |||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
|||||||||||| | |||| ||||||||| |||||||| ||||||| ||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
| ||||||||||| |||||| |||||||||| ||||
Sbjct: 39 gatagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||| |||||||| |||||||||||||| | ||||| |||||| ||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| ||||||||||| |||||| ||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||| |||||| |||||||||| |||||
Sbjct: 38 ctagaatgactt-acattgtgaaacggagggagtat 4
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||||||| ||||| |||||| |||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 71 aatgaatctagacatatatat 91
|||||||||||| | ||||||
Sbjct: 64 aatgaatctagatagatatat 84
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagacatata 88
|||||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgactt-acattgtgaaacgga 12
Query: 150 ggaagta 156
|||||||
Sbjct: 11 ggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagt 37
|||||||||||||||| ||||||||||
Sbjct: 108 atactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||| |||||||| ||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| ||||||||| ||||| || ||| | |||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||| |||||| |||||||||| |||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagtat 159
Score = 99.6 bits (50), Expect = 1e-20
Identities = 124/149 (83%), Gaps = 11/149 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||||||| |||| | ||| || ||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
||||||||||||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaat 40
Query: 121 gctagaatgacttaacattgcgaaacgga 149
| ||||||||||| |||||| ||||||||
Sbjct: 39 ggtagaatgactt-acattgtgaaacgga 12
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| || ||||||||||| || |||||||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||| ||| |||||| |||||| |||| ||||||| |||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||| |||||| |||||||||| |||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagtat 159
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 8 aagatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||||||||||||||||| |||||||||||||||||| ||||| |||||| |||| |||
Sbjct: 162 aagatactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagat 103
Query: 68 gttaatgaatctagacatatata 90
||| ||||||||| | |||||||
Sbjct: 102 gttgatgaatctaaatatatata 80
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||||||||||| || | | |||| |||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 71 aatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaat 120
||||||| ||||||| ||| |||||||||||||||||| ||| | | ||||
Sbjct: 99 aatgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaat 40
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||| |||||| |||||||||||||||
Sbjct: 39 gctagaatgactt-acattgtgaaacggaggaagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 131/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| | ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 72 atgaatctagaca----------tatatattcattaacatcaatataaatgtggaaaatg 121
||||||||||| | | ||||||||||||||||||||| |||| |||| |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||| |||||| |||||||||| |||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/155 (83%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| |||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
|||||||||||||||||| |||||||| |||||||| |||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| | |||| |||||||||||||||
Sbjct: 38 ctagaatgactt-atattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 129/155 (83%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| |||||||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| |||||||| ||||||||| ||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ttagaatgactt-acattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 109 bits (55), Expect = 1e-23
Identities = 122/145 (84%), Gaps = 12/145 (8%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||| |||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| || | |||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 77 ataaa-----------agattcattaccatcaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 121/145 (83%), Gaps = 12/145 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||| || |||||||||||||| ||||||| |||||||||||||||
Sbjct: 65 atgaatct-----------tttattaacatcaatatgaatgtgggaaatgctagaatgac 113
Query: 132 ttaacattgcgaaacggaggaagta 156
|| || ||| |||||||||| ||||
Sbjct: 114 tt-actttgtgaaacggagggagta 137
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 128/149 (85%), Gaps = 5/149 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 72 atgaatctagacatatatattcat-ta---acatcaatataaatgtggaaaatgctagaa 127
|||| | |||| | ||| || | || |||||||||| |||||||||||||||||||
Sbjct: 92 atgagtttagatagatacatatgtctagatacatcaatatgaatgtggaaaatgctagaa 33
Query: 128 tgacttaacattgcgaaacggaggaagta 156
|||||| |||||| |||||||||||||||
Sbjct: 32 tgactt-acattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/155 (81%), Gaps = 17/155 (10%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 72 atgaatctagacatatatat----------tcattaacatcaatataaatgtggaaaatg 121
|||||||||||| ||| |||||||||||||||| ||||||||||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 119 ctagaatgactt-acattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 109 bits (55), Expect = 1e-23
Identities = 95/110 (86%), Gaps = 10/110 (9%)
Strand = Plus / Plus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatctagacatatat---- 89
|||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 90 ------attcattaacatcaatataaatgtggaaaatgctagaatgactt 133
|||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%), Gaps = 10/110 (9%)
Strand = Plus / Minus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatcta----gacatatat 89
|||||||||||| ||||| |||||| ||||||||||||||||||||| || ||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 90 ------attcattaacatcaatataaatgtggaaaatgctagaatgactt 133
|||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 107 bits (54), Expect = 5e-23
Identities = 122/145 (84%), Gaps = 11/145 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||| |||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 78 atgaatc----------gattcattagcatcaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 28 tt-acattgtgaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 122/145 (84%), Gaps = 11/145 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||| |||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 65 atgaatc----------gattcattagcatcaatatgaatgtgggaaatgctagaatgac 114
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||| ||||
Sbjct: 115 tt-acattatgaaacggagggagta 138
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 7e-22
Identities = 128/153 (83%), Gaps = 9/153 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| |||||||| ||| |||| ||||||| |||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 72 atgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgct 123
||||||||| ||||||| ||||||||||||| | || ||||||| |||||||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 124 agaatgacttaacattgcgaaacggaggaagta 156
| |||||||| |||||| |||||||||||||||
Sbjct: 36 aaaatgactt-acattgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 109/130 (83%), Gaps = 8/130 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| ||||| |||||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 72 atgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgct 123
||||||| |||||||||| ||||||||||||| |||| |||||| ||||||||
Sbjct: 65 atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 124 agaatgactt 133
| ||||||||
Sbjct: 125 aaaatgactt 134
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| |||||||||||||||||||||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 72 atgaatctagacatatatat 91
||||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||| ||||||||||||| || |||| |||||||||||| | |||| ||||||||
Sbjct: 70 attcattatcatcaatataaatatgagaaatactagaatgactt-atattgtgaaacgga 12
Query: 150 ggaagta 156
|||||||
Sbjct: 11 ggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttc 51
||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| |||||| ||||| || ||
Sbjct: 136 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatt 77
Query: 71 aatgaatctagacatatata 90
||||||||||||||||||||
Sbjct: 76 aatgaatctagacatatata 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||| || ||||| ||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 70 attcattaatataaatatgaatgtgggaaatgctagaatgactt-acattgtgaaacgga 128
Query: 150 ggaagtata 158
|||||||||
Sbjct: 129 ggaagtata 137
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 103 bits (52), Expect = 7e-22
Identities = 121/145 (83%), Gaps = 13/145 (8%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||| | || |||||||| ||| ||| |||||||||||||||
Sbjct: 76 atgaatctagatagat------------atcaatatgaatatgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||| ||||| ||||||||||| |||||| ||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaatgactt-acattgtgaaacgga 129
Query: 150 ggaagta 156
|| ||||
Sbjct: 130 gggagta 136
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 101 bits (51), Expect = 3e-21
Identities = 127/149 (85%), Gaps = 5/149 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 72 atgaatctagacatatatat---tc-attaacatcaatataaatgtggaaaatgctagaa 127
|||| | |||| | ||| || || | |||||||||| ||| |||||||||||||||
Sbjct: 65 atgagtttagatagatacatatgtctagatacatcaatatgaatatggaaaatgctagaa 124
Query: 128 tgacttaacattgcgaaacggaggaagta 156
|||||| |||||| |||||||||||||||
Sbjct: 125 tgactt-acattgtgaaacggaggaagta 152
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 92 tcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagg 151
||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgactt-acattgtgaaacggagg 10
Query: 152 aagta 156
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||| | ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 72 atgaatctagaca------tatat----attcattaacatcaatataaatgtggaaaatg 121
||||||||||||| ||||| ||||||||||||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| ||||| |||||||||||||||
Sbjct: 125 ctagaatgactt-acattatgaaacggaggaagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 125/155 (80%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| ||| | ||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 72 atgaatctagacata----------tatattcattaacatcaatataaatgtggaaaatg 121
|||||| |||| ||| || ||||||||||||| |||| ||||| | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| ||||| |||||||||| ||||
Sbjct: 38 ctagaatgactt-acattatgaaacggagggagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 101 bits (51), Expect = 3e-21
Identities = 94/110 (85%), Gaps = 10/110 (9%)
Strand = Plus / Minus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatctagacatatat---- 89
|||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 90 ------attcattaacatcaatataaatgtggaaaatgctagaatgactt 133
|||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 101 bits (51), Expect = 3e-21
Identities = 94/110 (85%), Gaps = 10/110 (9%)
Strand = Plus / Plus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatctagacatatat---- 89
|||||||||||| |||||||||||| ||||||||||||||||||||||| | ||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 90 ------attcattaacatcaatataaatgtggaaaatgctagaatgactt 133
|||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 131/158 (82%), Gaps = 11/158 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||||||| |||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| ||||||| |||| |||| |||||||||||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||||||||| ||||| |||||||||| |||||||
Sbjct: 38 ctagaatgactt-acattatgaaacggagggagtatat 2
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||| |||| |||||| |||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 71 aatgaatctagacatatatatt 92
||||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatatt 85
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgactt-acattgtgaaacgga 12
Query: 150 ggaagta 156
|| ||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 67 atgaatctaga 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 74 gaatctagac-atatatattcattaacatcaatataaatgtggaaaatgctagaatgact 132
|||||||||| || || |||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 45 gaatctagactatctagattcattaacatcaatatgaatgtgagaaatgctagaatgact 104
Query: 133 taacattgcgaaacggaggaagta 156
| | |||| |||||||||||||||
Sbjct: 105 t-atattgtgaaacggaggaagta 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttc 51
|||| |||||||||| |||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||||||||| ||||| |||||||||||||||
Sbjct: 43 aaatgctagaatgactta-cattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 72 atgaatctagacatatat 89
||| ||||||||||||||
Sbjct: 69 atggatctagacatatat 52
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 93 cattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagga 152
||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgactt-acattatgaaacggagga 125
Query: 153 agta 156
||||
Sbjct: 126 agta 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagt 37
|||||||||||||||| ||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/147 (83%), Gaps = 14/147 (9%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttg 76
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||| |||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 75 -----tctaga--------ttcattgacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagtata 158
|| |||||| |||||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagtata 3
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtc 63
Query: 71 aatgaatctagaca 84
||||||||||||||
Sbjct: 64 aatgaatctagaca 77
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||||||| | |||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 72 atgaatctagacatatat 89
||||||||||||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||||| | | || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 72 atgaatctagaca 84
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
|||||||||| ||||| ||||||||||||| || |||| |||||||||||||||||
Sbjct: 144 atactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 54.0 bits (27), Expect = 6e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||| |||||| |||| |||||||||||| |||||| |||||||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgactt-acattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||| ||| ||||| || ||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 72 atgaatctagacatatat 89
||||||||||||||||||
Sbjct: 89 atgaatctagacatatat 72
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||| ||| |||||||| |||||||| | |||| ||||||||
Sbjct: 84 attcattaacatcaatatgaatatgggaaatgctaaaatgactt-atattgtgaaacgga 142
Query: 150 ggaagta 156
|| ||||
Sbjct: 143 gggagta 149
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 120/145 (82%), Gaps = 15/145 (10%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| |||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 70 atgaatct--------------attaacatcaatatgaatgtggaaaatgctataatgac 25
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| ||||| |||||||||
Sbjct: 24 tt-atattgtgaaacagaggaagta 1
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||| ||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaatgactt-acattgtgaaacaga 123
Query: 150 ggaagta 156
|| ||||
Sbjct: 124 gggagta 130
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgactt-acattgtgaaacgga 124
Query: 150 ggaagtatat 159
||||||||||
Sbjct: 125 ggaagtatat 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 132 atacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtt 73
Query: 71 aatgaat 77
|||||||
Sbjct: 72 aatgaat 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtattt 50
||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/146 (84%), Gaps = 11/146 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||| |||||||||||| |||||| ||||| |||||||||||
Sbjct: 139 atacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtt 80
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||| ||||||| ||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 79 aat--atctaga--------ttcattaacatcaatatgaatatagaaaatgctagaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 29 ctt-acattgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 123/149 (82%), Gaps = 11/149 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||| |||||||||||||| ||||| | |||| |||||||||
Sbjct: 65 atgaatctaga----------tattaacatcaatatgaatgtaggaaatagtagaatgac 114
Query: 132 ttaacattgcgaaacggaggaagtatata 160
|| | |||| |||||||||||||||||||
Sbjct: 115 tt-atattgtgaaacggaggaagtatata 142
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 124/146 (84%), Gaps = 12/146 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
Query: 72 -atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
||| ||||| |||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 65 tatg--tctag--------attcattaacatcaatatgaatgtggaaaatgttagaatga 114
Query: 131 cttaacattgcgaaacggaggaagta 156
||| | ||| |||||||||||||||
Sbjct: 115 ctt-atattatgaaacggaggaagta 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/145 (83%), Gaps = 10/145 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||| |||||||||||| |||| |||||| ||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||||||| ||||||||| ||||||||| ||||||||||||||||
Sbjct: 79 atgaatctagacata---------taacatcaacataaatgtgaaaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||| ||||
Sbjct: 28 tt-acattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 83.8 bits (42), Expect = 7e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 83 catatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcg 142
|||||| ||||||||||||| |||| ||||||| ||||||||||||||||| |||||| |
Sbjct: 77 catatagattcattaacatctatatgaatgtgggaaatgctagaatgactt-acattgtg 19
Query: 143 aaacggaggaagta 156
||||||||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||| ||||||| ||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgactt-acattgtgaaacggagggagta 124
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/146 (82%), Gaps = 13/146 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| ||| ||| || || |||||||| ||||||| |||||||||||||||
Sbjct: 65 ataaatttag------------ataaatatcaatatgaatgtgggaaatgctagaatgac 112
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| | |||| ||||||||||||||||
Sbjct: 113 tt-atattgtgaaacggaggaagtat 137
Score = 77.8 bits (39), Expect = 4e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 94 attaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaa 153
||||| |||||||||||||||| ||||||||||||||||| |||||| |||||||||| |
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgactt-acattgtgaaacggaggga 8
Query: 154 gta 156
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 11/156 (7%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||| ||| | || ||| |||| ||||||
Sbjct: 159 atactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtt 100
Query: 71 aatgaatctagaca------tatat----attcattaacatcaatataaatgtggaaaat 120
|||||||||||||| ||||| ||||||||||||| |||| |||||| |||
Sbjct: 99 aatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaat 40
Query: 121 gctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||| ||||| |||||||||||||||
Sbjct: 39 gctagaatgactt-acattatgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 126/157 (80%), Gaps = 11/157 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| ||| | ||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 72 atgaatctagacata----------tatattcattaacatcaatataaatgtggaaaatg 121
|||||| |||| ||| || ||||||||||||| |||| ||| ||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtata 158
|||||||||||| ||||| |||||||||| ||||||
Sbjct: 125 ctagaatgactt-acattatgaaacggagggagtata 160
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 72 atgaatctagac 83
||||||||||||
Sbjct: 76 atgaatctagac 65
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
|||| |||||||||| |||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 122/145 (84%), Gaps = 10/145 (6%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||||||| |||| |||||||||||||| ||| |||| ||||| |||||||||| ||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgatagta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||| |||| ||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 65 -----tcta----tatagatttattaacatcaatataattgtggaaaatgctagaatgac 115
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 116 tt-acattgtgaaacggagggagta 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 72 atgaatcta 80
|| ||||||
Sbjct: 79 ataaatcta 71
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||| |||||| | |||||||||||||||| ||||| |||||| |||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 72 atgaatctagacatatata----------ttcattaacatcaatataaatgtggaaaatg 121
||||||||||| ||||||| |||||||||| | |||| |||||||||||||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| |||||| |||||||||| ||||
Sbjct: 125 ctagaatgactt-acattgtgaaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| |||||| |||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 72 atgaatctagacatatatat 91
|||||||||||||| |||||
Sbjct: 98 atgaatctagacatctatat 79
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||| |||||||||| | |||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 72 atgaatctagacatatatat 91
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | |||||| ||| |||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 72 atgaatctagacatatatat 91
||||||||||||| ||||||
Sbjct: 98 atgaatctagacacatatat 79
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 63 atgaatctaga 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 58 attcattaacatcaatatgaatgtaggaaatgctagaatgactt-acattatgaaacgga 116
Query: 150 ggaagta 156
|| ||||
Sbjct: 117 gggagta 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 113 tggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 47 tggaaaatgctagaatgactt-acattgtgaaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtattt 50
||||| |||||||||| |||||||||||||||||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 130/158 (82%), Gaps = 11/158 (6%)
Strand = Plus / Minus
Query: 10 gatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
||||||||||||||||| |||||||||||||||||| |||| |||||| |||| ||||
Sbjct: 160 gatactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgc 101
Query: 70 taatgaatctagacatatat----------attcattaacatcaatataaatgtggaaaa 119
|||||||| || |||||||| |||||||| |||| |||| ||| | |||||
Sbjct: 100 taatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaa 41
Query: 120 tgctagaatgacttaacattgcgaaacggaggaagtat 157
|| ||||||||||| |||||| |||||||||| |||||
Sbjct: 40 tgttagaatgactt-acattgtgaaacggagggagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 130/157 (82%), Gaps = 11/157 (7%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||| |||| | ||| |||| |||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 71 aatgaatctagac----atatat------attcattaacatcaatataaatgtggaaaat 120
|||||||||| || |||||| |||||||| |||| |||| ||||||||||||
Sbjct: 64 aatgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaat 123
Query: 121 gctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||||||| |||||| |||||||||| |||||
Sbjct: 124 gctagaatgactt-acattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 93.7 bits (47), Expect = 7e-19
Identities = 123/146 (84%), Gaps = 8/146 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcat-tctagtatttctcacatttatattgatgtt 70
||||||||||||||| ||||||||||||| | ||| ||||| |||||| ||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||| || | || |||||||| ||||||||| ||||||| |||||||| |||||
Sbjct: 83 aatgtat------agctagattcattagcatcaatatgaatgtgggaaatgctaaaatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
|||| ||||| |||||||||||||||
Sbjct: 29 ctta-cattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 123/146 (84%), Gaps = 8/146 (5%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| ||||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctaga-atga 130
|||||||||| ||| ||||| ||||||||| ||||||| |||||||| | ||||
Sbjct: 65 atgaatctag------ctatacattagcatcaatatgaatgtgggaaatgctaaacatga 118
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 119 ctt-acattgtgaaacggagggagta 143
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 13 actccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaa 72
|||||||||||||| ||||||||||||||||| ||||| |||||| |||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 73 tgaatctagacatatatat 91
|||||||||||||||||||
Sbjct: 97 tgaatctagacatatatat 79
Score = 60.0 bits (30), Expect = 1e-08
Identities = 121/150 (80%), Gaps = 11/150 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||||| | ||| |||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 72 atgaatc----tagacatatat------attcattaacatcaatataaatgtggaaaatg 121
|||||| |||| |||||| ||||| |||| || |||| ||||||| |||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggagg 151
|||||||||||| ||||| ||||||||||
Sbjct: 125 ctagaatgactt-acattatgaaacggagg 153
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 130/158 (82%), Gaps = 11/158 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||| |||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||||| | |||| ||||||| |||| |||| |||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||||||||| ||||| |||||||||| |||||||
Sbjct: 38 ctagaatgactt-acattatgaaacggagggagtatat 2
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||| |||| |||||| |||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 71 aatgaatctagacatatatat 91
|||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatat 84
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||| ||||||||||||||||||||| |||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgactt-acattgtgaaacgga 12
Query: 150 ggaagta 156
|||||||
Sbjct: 11 ggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||| || ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 98 acatcaatataaatgtggaaaatgctagaatgactta 134
|||||||||| ||| ||||||||||||||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgactta 108
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 93.7 bits (47), Expect = 7e-19
Identities = 123/146 (84%), Gaps = 8/146 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| ||||| |||||| ||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctaga-atga 130
|||||||||| ||| ||||| ||||||||| ||||||| |||||||| | ||||
Sbjct: 83 atgaatctag------ctatacattagcatcaatatgaatgtgggaaatgctaaacatga 30
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||| ||||
Sbjct: 29 ctt-acattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 123/146 (84%), Gaps = 8/146 (5%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcat-tctagtatttctcacatttatattgatgtt 70
||||||||||||||| ||||||||||||| | ||| ||||| |||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||| || | || |||||||| ||||||||| ||||||| |||||||| |||||
Sbjct: 65 aatgtat------agctagattcattagcatcaatatgaatgtgggaaatgctaaaatga 118
Query: 131 cttaacattgcgaaacggaggaagta 156
|||| ||||| |||||||||||||||
Sbjct: 119 ctta-cattgtgaaacggaggaagta 143
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||| |||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||||||||| | ||| |||||||||||||||||| |||||| ||||||||
Sbjct: 65 attcattaacatcaatatatacgtgaaaaatgctagaatgactt-acattgtgaaacgga 123
Query: 150 ggaagta 156
|||||||
Sbjct: 124 ggaagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
|||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 72 atg 74
|||
Sbjct: 65 atg 67
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 93 cattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagga 152
||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgactt-acattgtgaaacggagga 9
Query: 153 agta 156
||||
Sbjct: 8 agta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
|||||| |||||| | ||||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctag 68
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||| | |||||||||||||| ||| ||||| || ||||||||||||| |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 71 aatgaatctagacat 85
|||||||||||||||
Sbjct: 64 aatgaatctagacat 78
Score = 63.9 bits (32), Expect = 6e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||| ||||||||||||| ||| |||||||| |||||||| |||||| | ||||||
Sbjct: 70 attcattagcatcaatataaatatgggaaatgctataatgactt-acattgtggaacgga 12
Query: 150 ggaagtat 157
|| |||||
Sbjct: 11 gggagtat 4
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgactt-acattgtgaaacgga 12
Query: 150 ggaagtatat 159
||||||||||
Sbjct: 11 ggaagtatat 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||||||||||| |||| || ||| |||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtt 63
Query: 71 aatgaatctaga 82
||||||| ||||
Sbjct: 64 aatgaatgtaga 75
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 110/133 (82%), Gaps = 10/133 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||| | |||| |||||||||||| |||||||| ||| ||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 72 atgaatctagacatatat----------attcattaacatcaatataaatgtggaaaatg 121
||||||||| |||||||| |||||||| ||||||||| ||| ||||||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 122 ctagaatgactta 134
|||||||||||||
Sbjct: 38 ctagaatgactta 26
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||| | || | |||||||||||||||||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 72 atgaatctagacatatatat 91
|||||| |||| | ||||||
Sbjct: 65 atgaatttagatagatatat 84
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||||||| | || ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 72 atgaatctagacatatat 89
||||||||||||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| | ||||||| | |||||||| | | || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 72 atgaatctagaca 84
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||||||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 84 atatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcga 143
||||||||||||||||| |||||| |||||| ||||||||||||||||| |||||| ||
Sbjct: 76 atatatattcattaacagcaatatgaatgtgagaaatgctagaatgactt-acattgtga 18
Query: 144 aacggaggaagta 156
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtattt 50
|||||||||||||||| |||||||||||||||||| ||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattt 92
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||| ||||||||||||| ||||| |||||||||| |||||||
Sbjct: 122 atactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 71 aatgaa 76
||||||
Sbjct: 62 aatgaa 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 91 ttcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggag 150
||||||||||||| ||||||||||| ||||||||||||||||| | |||| |||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgactt-agattgtgaaacggag 115
Query: 151 gaagtatat 159
| |||||||
Sbjct: 116 ggagtatat 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 103 aatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgactta-cattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatatt 64
|||| |||||||||| |||||||||||||| ||| ||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 72 a 72
|
Sbjct: 65 a 65
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||| ||||||||| ||| |||||||| |||||||||||||||
Sbjct: 123 atacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtt 64
Query: 71 aa 72
||
Sbjct: 63 aa 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 95 ttaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaag 154
||||||||||||||||| || |||||||| |||||||| | |||| |||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgactt-atattgtgaaacggaggaag 120
Query: 155 tatata 160
||||||
Sbjct: 121 tatata 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 95 ttaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaag 154
||||||||||||||||| || |||||||| |||||||| |||||| |||||||||| ||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgactt-acattgtgaaacggagggag 7
Query: 155 ta 156
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| ||||| |||| ||||||||||||||||| ||| | |||||| |||| ||||||
Sbjct: 133 atacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtt 74
Query: 71 aatgaatctagacatatatat 91
|||||||||||||||||||||
Sbjct: 73 aatgaatctagacatatatat 53
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| |||| |||||| |||||||||||||||| ||||| |||| |||
Sbjct: 67 attcattaacatctatatgaatgtgtgcaatgctagaatgactt-acattatgaaatgga 125
Query: 150 ggaagtatat 159
||||||||||
Sbjct: 126 ggaagtatat 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctag 45
|||||||||||||||| |||||||||||||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctag 38
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 72 atgaatcta 80
|||||||||
Sbjct: 66 atgaatcta 58
Score = 75.8 bits (38), Expect = 2e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 103 aatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||||||||||||||||||||| | |||| |||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgactt-atattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatatt 64
|||| |||||||||| |||| ||||||||||||| |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||| |||||||| ||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgactt-acattatgaaacgga 119
Query: 150 ggaagta 156
|| ||||
Sbjct: 120 gggagta 126
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 84 atatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcga 143
||||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||| ||
Sbjct: 55 atatatattcattaatatcaatatgaatgttggaaatgctagaatgactt-acattgtga 113
Query: 144 aacggaggaagta 156
|||||||||||||
Sbjct: 114 aacggaggaagta 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 72 atgaat 77
||||||
Sbjct: 66 atgaat 61
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttc 51
||||||||||||||| |||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc 44
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 112 gtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||| ||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 48 gtgggaaatgctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 84 atatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcga 143
||||| |||||||||||||||||||| |||||||||||||||||| |||| |||||| ||
Sbjct: 76 atatagattcattaacatcaatataattgtggaaaatgctagaataactt-acattgtga 18
Query: 144 aacggaggaagta 156
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||| ||||||| |||| |||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcat 40
||||||||||||||| |||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 120/146 (82%), Gaps = 13/146 (8%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| ||| ||| || || |||||||| ||||||| |||||||||||||||
Sbjct: 65 ataaatttag------------ataaatatcaatatgaatgtgggaaatgctagaatgac 112
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| | |||| ||||||||||||||||
Sbjct: 113 tt-atattgtgaaacggaggaagtat 137
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 94 attaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaa 153
||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgactt-acattgtgaaacggaggga 8
Query: 154 gta 156
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 8 aagatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||| |||
Sbjct: 1 aagatactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagat 60
Query: 68 gttaatgaatcta 80
|||| ||||||||
Sbjct: 61 gttagtgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| ||||||||||||| ||| |||| ||||||| | | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 72 atgaatctagacatatata 90
||||||||||||||||||
Sbjct: 98 gtgaatctagacatatata 80
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||||||||||| ||||| |||||| |||||||| ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 71 aatgaatctagacatat 87
|||||||||||| ||||
Sbjct: 56 aatgaatctagatatat 40
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||| |||||||| ||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 50 attcattaatatcaatatgaatgtgggaaatgctagaatgactt-acattatgaaacgga 108
Query: 150 ggaagtat 157
||||||||
Sbjct: 109 ggaagtat 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 119 atgctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||||| |||||| |||||||||| ||||
Sbjct: 41 atgctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 72 atgaatct 79
||||||||
Sbjct: 75 atgaatct 68
Score = 81.8 bits (41), Expect = 3e-15
Identities = 118/145 (81%), Gaps = 14/145 (9%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| | |||||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||| | |||||||| ||||||||| |||||| |||||||||||||||
Sbjct: 65 atg-------------agattcattagcatcaatatgaatgtgagaaatgctagaatgac 111
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| |||||||||||||||
Sbjct: 112 tt-atattgtgaaacggaggaagta 135
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 118/145 (81%), Gaps = 17/145 (11%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| || || |||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 72 atgaatcta----------------aacatcaatatgaatgtggaaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||| ||||
Sbjct: 28 tt-acattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 117/145 (80%), Gaps = 17/145 (11%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt- 63
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|| |||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 64 ---------------tagattcattaacatcaatatgaatgtgggatatgctagaatgac 108
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| |||||||||||||||
Sbjct: 109 tt-atattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||
Sbjct: 109 atacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatt 50
Query: 71 aat 73
|||
Sbjct: 49 aat 47
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaa 153
||||| ||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgactt-gcattgtgaaacggaggaa 105
Query: 154 gtatata 160
|||||||
Sbjct: 106 gtatata 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattcta 44
||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 72 atgaatctaga 62
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgactt-acattgtgaaacgga 107
Query: 150 ggaagta 156
|||||||
Sbjct: 108 ggaagta 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 72 atgaat 77
||||||
Sbjct: 54 atgaat 49
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatt 58
||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 109 aatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||| ||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 51 aatgtgggaaatgctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||||||||||| |||| |||| || ||||||||| |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 71 aatgaatctag 81
|||||||||||
Sbjct: 72 aatgaatctag 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||| ||||||||| || ||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 66 attcattagcatcaatatgaacgtgaaaaatgatagaatgactt-acattgtgaaacgga 124
Query: 150 ggaagtat 157
|| |||||
Sbjct: 125 gggagtat 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
|||||||||||| |||| |||||||||||| |||||||| ||| ||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||||||||| |||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 83.8 bits (42), Expect = 7e-16
Identities = 125/152 (82%), Gaps = 8/152 (5%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||| | ||||| |||||| ||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 72 atgaatctagac-------atatatattcattaacatcaatataaatgtggaaaatgcta 124
||| |||||||| || || |||||||| |||||||| ||||||| |||| |||
Sbjct: 95 atggatctagactatatctatctagattcattagtatcaatatgaatgtgggaaatacta 36
Query: 125 gaatgacttaacattgcgaaacggaggaagta 156
||||||||| | |||| |||||||||||||||
Sbjct: 35 gaatgactt-atattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| |||||| ||||| | |
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtact 72
Query: 71 aatgaatctagacatatat 89
|||||||||||||||||||
Sbjct: 71 aatgaatctagacatatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 103 aatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtata 158
||||| ||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgactt-acattgtgaaacggaggaagtata 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
|||| |||||||||| |||||||||| ||||||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||| |||||| |||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataactta-cattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||| |||||||||| |||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 133 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| ||||| |||||| ||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 72 atgaatc 78
|||||||
Sbjct: 74 atgaatc 68
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||| |||||||| |||||||| |||||| ||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgactt-acattgtgaaacgga 127
Query: 150 ggaagta 156
|||||||
Sbjct: 128 ggaagta 134
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
||||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattga 66
|||||||||| |||| |||||||||||||||||||||| ||||||| |||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 101 tcaatataaatgtggaaaatgctagaatgactta 134
||||||| |||||| ||||| |||||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgactta 95
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| | |||||||||| |||| |||| |||||| ||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 72 atgaatctagacatatat 89
||||||||||| ||||||
Sbjct: 70 atgaatctagatatatat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||||||||||| |||| |||||| |||| | ||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatgttagagtgactt-acatggtgaaacgga 123
Query: 150 ggaagta 156
|| ||||
Sbjct: 124 gggagta 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
|||||||||||||||| ||||| |||||| | ||| |||||||| ||| ||||
Sbjct: 4 atactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 91 ttcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggag 150
||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgactt-gcattgtgaaacggag 11
Query: 151 gaagta 156
||||||
Sbjct: 10 gaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||| |||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaa 76
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
|||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 98 acatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||| |||||| ||||||||||||||||| |||||| |||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgactt-acattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
||||||||||||||| |||||||||||| |||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctag 78
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 92 tcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagg 151
||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgactt-acattgtgaaacggagg 125
Query: 152 aagtat 157
||||||
Sbjct: 126 aagtat 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||||| ||||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 72 a 72
|
Sbjct: 65 a 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||||||||||||| ||||| |||||| |||| ||||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 71 aatga 75
|||||
Sbjct: 71 aatga 67
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 95 ttaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaag 154
|||||||| |||| ||||||| ||||||||||||||||| |||||| |||||||||| ||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgactt-acattgtgaaacggagggag 7
Query: 155 ta 156
||
Sbjct: 6 ta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||| |||||| ||| | |||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 72 atgaatctagacatata 88
|||||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| |||| ||||||| |||||||||| ||||| ||||| ||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagactt-acattatgaaacgga 12
Query: 150 ggaagta 156
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 94 atacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgta 35
Query: 71 aatga 75
|||||
Sbjct: 34 aatga 30
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 92 tcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagg 151
||||| ||||||||||||||||| ||||||||||||||||| | |||| |||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgactt-atattgtaaaacggagg 88
Query: 152 aagtatat 159
||||||||
Sbjct: 89 aagtatat 96
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 121/145 (83%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | |||||| ||| |||||||| | | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||||||||||||| || ||||||||||||| |||| |||||| |||||||||| | |
Sbjct: 65 atgaatctagaca-ctagattcattaacatctatatgtatgtgggcaatgctagaaagtc 123
Query: 132 ttaacattgcgaaacggaggaagta 156
|| ||||| |||||||||| ||||
Sbjct: 124 tt-acattatgaaacggagggagta 147
Score = 65.9 bits (33), Expect = 2e-10
Identities = 119/145 (82%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | |||||| ||| | ||||| |||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||| | || ||||||||||||| | | |||||| |||||||||| | |
Sbjct: 87 atgaatctag-tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtc 29
Query: 132 ttaacattgcgaaacggaggaagta 156
|| |||||| |||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 92 tcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagg 151
|||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgactt-acattgtgaaacggagg 10
Query: 152 aagta 156
||||
Sbjct: 9 gagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||| ||| |||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 72 atga 75
||||
Sbjct: 65 atga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 96 taacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagt 155
|||||||||||| |||||||||||||||| ||| | || |||||| |||||||||| |||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaatt-acattgtgaaacggagggagt 127
Query: 156 a 156
|
Sbjct: 128 a 128
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | ||| ||| |||| |||||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | | |||| ||| |||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 72 atgaatctagaca 84
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | || || ||| | |||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 72 atgaatctagacatatat 89
||||||||||| ||||||
Sbjct: 98 atgaatctagatatatat 81
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 119/146 (81%), Gaps = 18/146 (12%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt 63
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
| |||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 64 a-tgaatcta----------------aacatcaatatgaatatggaaaatgctagaatga 106
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||||||||
Sbjct: 107 ctt-acattgtgaaacggaggaagta 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 96 taacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagt 155
|||||||||||| |||||||||||||||||||| |||| |||||| |||||||||| |||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataactt-acattgtgaaacggagggagt 6
Query: 156 atat 159
||||
Sbjct: 5 atat 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||| |||||||||| |||||||||||||||||| |||| || ||| |||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 129/157 (82%), Gaps = 11/157 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | || ||| ||| |||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 72 atgaatctag----acatatat------attcattaacatcaatataaatgtggaaaatg 121
|||||||||| |||||||| ||||||||||||| |||| ||||||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtata 158
|||||| | ||| ||||| |||||||||||||||||
Sbjct: 125 ctagaaagtctt-acattatgaaacggaggaagtata 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 159 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 100
Query: 71 aatgaatctagacatatat 89
|||||||||||| ||||||
Sbjct: 99 aatgaatctagaaatatat 81
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
|||||||||||||||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttata 62
|||||||||||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtatata 160
|||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgactt-acattgtgaaacggagggagtatata 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 105 tataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||||| ||||||||||||||||| |||||| |||||||||| |||||
Sbjct: 99 tataaatgtgggaaatgctagaatgactt-acattgtgaaacggagggagtat 150
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 20 ccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
||||||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacgg 148
|||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgactt-acattgtgaaacgg 98
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||| |||||||| |||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 72 atgaatcta 80
|||||||||
Sbjct: 70 atgaatcta 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| |||||||||||| ||| |||||||| | |||| ||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgactt-atattgtgaaacgga 123
Query: 150 ggaagta 156
|||||||
Sbjct: 124 ggaagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
|||||||||||||||| |||||||||||||| | |||||| |||||| ||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 98 acatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||| |||||||||||| | | |||||||| |||||| |||||||||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgactt-acattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 109/131 (83%), Gaps = 8/131 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||| | |||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 72 atgaatctag--acatatat------attcattaacatcaatataaatgtggaaaatgct 123
|||||||||| |||||||| ||||||||||||| |||| ||||||| ||||||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 124 agaatgactta 134
|||||||||||
Sbjct: 36 agaatgactta 26
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 17 cctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatgaa 76
|||||||||| ||| ||||||||||||| ||| | |||||| |||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 77 tctagacatatat 89
||| |||||||||
Sbjct: 70 tctggacatatat 82
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 129/157 (82%), Gaps = 11/157 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | || ||| ||| |||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 72 atgaatctag----acatatat------attcattaacatcaatataaatgtggaaaatg 121
|||||||||| |||||||| ||||||||||||| |||| ||||||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtata 158
|||||| | ||| ||||| |||||||||||||||||
Sbjct: 38 ctagaaagtctt-acattatgaaacggaggaagtata 3
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| |||||||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 71 aatgaatctagacatatat 89
|||||||||||| ||||||
Sbjct: 64 aatgaatctagaaatatat 82
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 122/148 (82%), Gaps = 11/148 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||| ||| ||||| |||||| |||||||||| |
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtca 79
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
| ||||||| ||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 78 ct--atctaga--------ttcattagcatcagtatgaatgtggaaaatgctagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagtatat 159
|| | ||| ||||| ||||||||||||
Sbjct: 28 tt-atattatgaaacagaggaagtatat 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||| ||||| ||| ||||||||||||| |||| |||||| ||| ||||| |
Sbjct: 4 atacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgct 63
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 122/146 (83%), Gaps = 10/146 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| ||||||| ||| |||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
|||||||||||||||| | |||| || ||| |||||||||||| ||||||||||
Sbjct: 79 atgaatctagacatat------aataac-tc--tatgaatgtggaaaatactagaatgac 29
Query: 132 ttaacattgcgaaacggaggaagtat 157
|| |||||| ||||||||||||||||
Sbjct: 28 tt-acattgtgaaacggaggaagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 8 aagatactccctccgtttcgcaatgtaagtcattctagtattt 50
|||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1 aagatacttcctccgtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| | | |||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 72 atgaatctagacatat 87
||||||||||| ||||
Sbjct: 65 atgaatctagatatat 80
Score = 77.8 bits (39), Expect = 4e-14
Identities = 127/155 (81%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||| | | ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 72 atgaatc------tagacatatat----attcattaacatcaatataaatgtggaaaatg 121
||||||| ||||||||||| ||||||||||||| |||| |||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| ||||| |||||||||||||||
Sbjct: 38 ctagaatgactt-acattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 85 tatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaa 144
|||| ||| |||||||||||||| |||||||||||| ||| |||||||| |||||| |||
Sbjct: 75 tataaatttattaacatcaatatgaatgtggaaaatactaaaatgactt-acattgtgaa 17
Query: 145 acggaggaagta 156
||||||||||||
Sbjct: 16 acggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 72 atgaatctagacata 86
|| ||| || |||||
Sbjct: 65 ataaatttatacata 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcatt 41
|||||||||||||||| ||||||||| ||||
Sbjct: 111 atactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/155 (81%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||||||| ||| | | ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 72 atgaatctagacata----------tatattcattaacatcaatataaatgtggaaaatg 121
||||||||||||||| || ||||||||||||| |||| |||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 122 ctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||| ||||| |||||||||||||||
Sbjct: 125 ctagaatgactt-acattatgaaacggaggaagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| | | |||||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 72 atgaatctagacatat 87
||||||||||| ||||
Sbjct: 98 atgaatctagatatat 83
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||| |||||||| ||| ||||| || ||| |||||||||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 71 aatgaatctagacatatata 90
||| ||||||||||| ||||
Sbjct: 77 aataaatctagacatttata 58
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaa 153
|||||||||||||| ||| ||| |||||||| |||||||| ||||| ||||||||||||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgactt-gcattgtgaaacggaggaa 133
Query: 154 gtat 157
||||
Sbjct: 134 gtat 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatt 58
|||| |||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacatt 51
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattga 66
||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 101 tcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||| |||| ||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgactt-acattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||| ||| |||| |||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
|||||||||||||| |||||||||||||| ||||||||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| | ||| ||||||||| |||||||| |||||| ||||||||
Sbjct: 65 attcattaacatcaatatgtacgtgaaaaatgctaaaatgactt-acattgtgaaacgga 123
Query: 150 ggaagta 156
|||||||
Sbjct: 124 ggaagta 130
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 77.8 bits (39), Expect = 4e-14
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 69 attcattaacatcaatatggatgtg-aaaatgctagaatgactt-acattgtgaaacgga 12
Query: 150 ggaagta 156
|||||||
Sbjct: 11 ggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 72 atgaat 77
||||||
Sbjct: 64 atgaat 69
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 ccctccgtttcgcaatgtaagtcattctagtattt 50
||||||||||| |||||||||||||||||| ||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 115 gaaaatgctagaatgacttaacattgcgaaacggagg 151
||||||||||||||||||| |||||| ||||||||||
Sbjct: 72 gaaaatgctagaatgactt-acattgtgaaacggagg 107
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 117/142 (82%), Gaps = 12/142 (8%)
Strand = Plus / Plus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| |||| ||||||||||||| |||||||| || |||||||| ||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 75 aatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgactta 134
||||| ||||| ||||||||| || |||||| ||||||||| ||||||||
Sbjct: 68 aatct--acata---------taacatcaacatgaatgtgaaaaatgctaaaatgactt- 115
Query: 135 acattgcgaaacggaggaagta 156
| |||| |||||||||||||||
Sbjct: 116 atattgtgaaacggaggaagta 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||| |||||||| || || ||||||||||||||||| | |||| ||||||||
Sbjct: 70 attcattaatatcaatatctatatgagaaatgctagaatgactt-atattgtgaaacgga 12
Query: 150 gg 151
||
Sbjct: 11 gg 10
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||| ||||| ||| ||||||||||||||| ||||| |||||| ||||||||
Sbjct: 69 attcattaacattaatatgaatatggaaaatgctagaaggactt-acattgtgaaacgga 127
Query: 150 ggaagta 156
|||||||
Sbjct: 128 ggaagta 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||| |||||| |||| || ||| ||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 74 atgaatctaga 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||| ||||||||||||| ||||||||||| ||||| |||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgactt-acattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattcta 44
||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattcta 37
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||| ||||||| |||| ||||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||||||||| |||||| |||||| ||||||| ||| ||||| ||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggctt-acattatgaaacgga 123
Query: 150 ggaagta 156
|||||||
Sbjct: 124 ggaagta 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||| ||||||| ||||||||||||||||| | |||| |||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgactt-atattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
|||||| ||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 57 atataattgtggaaaatgctagaatgactt-acattgtgaaacggaggaagtat 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
||||| |||||||||| |||||||||||||||||| |||| |||| ||||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccacaattatat 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttc 51
||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttc 44
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 92 tcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggagg 151
|||||||||||||||| |||||||||| ||||| |||||||| ||||| ||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgactt-acattatgaaacggagg 10
Query: 152 aagta 156
|||||
Sbjct: 9 aagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||||||| ||||| |||||||||||||||||| | ||| |||||| ||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||| ||| | || |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 72 atga 75
||||
Sbjct: 65 atga 68
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||| ||||||| || |||||||||||||| |||||| ||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgactt-acattgtgaaacagagggagta 123
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 119/146 (81%), Gaps = 14/146 (9%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcat-tctagtatttctcacatttatattgatgtt 70
||||||||||||||| ||||||||||| |||| ||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 71 aatgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatga 130
|||||||||||| | || |||||||| ||| ||| ||||||||||||||
Sbjct: 65 aatgaatctagatagat------------atcaatatgaatatgggaaatgctagaatga 112
Query: 131 cttaacattgcgaaacggaggaagta 156
||| |||||| |||||||||||||||
Sbjct: 113 ctt-acattgtgaaacggaggaagta 137
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
|||| |||||||||| |||||||||||||||||| ||||| || ||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctaga 126
|||||||||||||||||| ||||||| ||||| ||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| | || ||| ||| |||||| |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 100
Query: 71 aatgaatctagacatat 87
|||||||||||||||||
Sbjct: 99 aatgaatctagacatat 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||| |||| | |||||||||| | || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 72 atgaatctagacatata 88
||||| ||||| |||||
Sbjct: 65 atgaacctagatatata 81
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/154 (81%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||| | || ||| ||| || | ||| || | ||||||
Sbjct: 157 atactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtt 98
Query: 71 aatgaatctagacatatat--------attcattaacatcaatataaatgtggaaaatgc 122
||||||||||||||||| | ||||||||||||| |||| ||||||| |||||
Sbjct: 97 aatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatgc 38
Query: 123 tagaatgacttaacattgcgaaacggaggaagta 156
||||| ||||| ||||| |||||||||||||||
Sbjct: 37 tagaaagactt-acattatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||||| |||||| ||| | |||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 72 atgaatctagaca 84
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||| | |||||| ||| |||||| || | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtt 63
Query: 71 aatgaatctagacatatatat 91
|||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatat 84
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| | || |||||||| |||||||||| | ||| |||||| ||||||||
Sbjct: 70 attcattaacatctaaatgaatgtggataatgctagaaagtctt-acattgtgaaacgga 12
Query: 150 ggaagtatat 159
||||||||||
Sbjct: 11 ggaagtatat 2
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
||||||||||||||| |||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||||| || |||| ||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgactt-acattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcaca 56
|||||||||||||| |||||||| ||||||||| ||||| ||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 7e-13
Identities = 117/145 (80%), Gaps = 14/145 (9%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||||||||||| ||||| |||||| | |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 72 atgaatctagacatatatattcattaacatcaatataaatgtggaaaatgctagaatgac 131
||| | ||||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 65 atg-------------agattcattaatatcaatgtgaatgtgggaaatgctagaatgac 111
Query: 132 ttaacattgcgaaacggaggaagta 156
|| | |||| |||||||||||||||
Sbjct: 112 tt-atattgtgaaacggaggaagta 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||||||||||||| ||||| |||||| | |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 72 atgaatct 79
||||||||
Sbjct: 75 atgaatct 68
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| | || ||| ||| |||||| |||| ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 63
Query: 71 aatgaatctagacatat 87
|||||||||||||||||
Sbjct: 64 aatgaatctagacatat 80
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||| |||| | |||||||||| | || ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 72 atgaatctagacatata 88
||||| ||||| |||||
Sbjct: 98 atgaacctagatatata 82
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
|||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||||| ||||||| ||||||||||||||||| | |||| |||||||||| |||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgactt-atattgtgaaacggagggagtatat 2
Query: 160 a 160
|
Sbjct: 1 a 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 101 tcaatataaatgtggaaaatgctagaatgactta 134
||||||| ||||||| ||||||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgactta 94
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 23 tttcgcaatgtaagtcattctagtatttctcacatttatattga 66
|||| |||| ||||||||||||| ||||| |||||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| ||||||| ||| |||||| |||| ||||||
Sbjct: 138 atactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtt 79
Query: 71 aatgaatctagacata 86
||| ||||||||||||
Sbjct: 78 aataaatctagacata 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaa 153
||||||||| |||| |||||||| ||||||||||| |||| ||||| |||||||||| |
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataactt-acattatgaaacggaggga 134
Query: 154 gtata 158
|||||
Sbjct: 135 gtata 139
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||||||| ||| ||| | |||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 72 atgaatctagacatat 87
||||||||| ||||||
Sbjct: 98 atgaatctaaacatat 83
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||||||||||| || | || || |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | |||||| ||| | |||||| |||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 72 atgaatctagacatat 87
|| |||||||||||||
Sbjct: 74 ataaatctagacatat 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 94 attaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaa 153
||||||||| |||| ||||||| |||||||||| | |||| ||||| ||||||||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtctta-cattgtgaaacggaggaa 131
Query: 154 gta 156
|||
Sbjct: 132 gta 134
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||||||| |||| |||||||| ||||| ||| |||| ||| |||||||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 46 atgaatctaga 36
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcatt 41
||||| |||||||||| ||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcatt 34
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||| |||||||||||| || ||||||||| ||||| || |||||| |||| |||
Sbjct: 41 attcattagtatcaatataaatatgaaaaatgctaaaatga-tttacattgtgaaatgga 99
Query: 150 ggaagta 156
|| ||||
Sbjct: 100 gggagta 106
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 19 tccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatgaatc 78
|||||||| |||| ||||||||| ||| |||| ||| ||||| ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 79 tagacatatat 89
|||||| ||||
Sbjct: 72 tagacagatat 82
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||||||| ||| ||||| || ||||||||| |||||||| | |||| ||||||||
Sbjct: 70 attcattaacattaatgtaaatatgaaaaatgctaaaatgactt-atattgtgaaacgga 12
Query: 150 ggaagtatata 160
||||||||||
Sbjct: 11 agaagtatata 1
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
|||||||||||||||| |||||||| ||||||||| |||| ||| |||| |||||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacat 57
|||||||| |||||| |||| |||||||||||||||||| ||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttcacat 50
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 98 acatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||| |||| || ||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatga-tttacattgtgaaacggagggagtat 105
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| | ||||| ||| | |||||| |||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgct 100
Query: 71 aatgaatctagacat 85
|||||||||||||||
Sbjct: 99 aatgaatctagacat 85
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 17 cctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatgaa 76
|||||||||| |||| ||||||||| ||| |||| | ||| ||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 77 tctagacatatatat 91
|||||||||||||||
Sbjct: 67 tctagacatatatat 53
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
|||||||| ||||||||| ||| ||||||||||| |||||||| | |||| ||||||||
Sbjct: 67 attcattatcatcaatatgaatacggaaaatgctaaaatgactt-atattgtgaaacgga 125
Query: 150 ggaagt 155
||||||
Sbjct: 126 ggaagt 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtata 158
|||| |||| || ||||||||||||||||| |||||| ||||| ||| |||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgactt-acattgtgaaacagagaaagtata 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 22 gtttcgcaatgtaagtcattctagtatttc 51
||||| |||||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatt 58
||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacatt 51
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacat 57
||||||||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 110 atgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||| ||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgactt-acattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctag 45
|||||||||||||||| |||||||| |||||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctag 62
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 10 gatactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
||||||||||||||||| ||||||||| | |||||| ||| | || ||| || | ||||
Sbjct: 160 gatactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgc 101
Query: 70 taatgaatctagacatat 87
||||||||||||||||||
Sbjct: 100 taatgaatctagacatat 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | |||||| ||| | ||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 67.9 bits (34), Expect = 4e-11
Identities = 71/83 (85%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 47 atttctcacatttatattgatgttaatgaatctagaca----tatatattcattaacatc 102
||||| |||||| |||||||||| |||||||||||||| | || ||||||| |||||
Sbjct: 6 atttcccacattcatattgatgtcaatgaatctagacatctgtctagattcattgacatc 65
Query: 103 aatataaatgtggaaaatgctag 125
||||| ||||||| |||||||||
Sbjct: 66 aatatgaatgtgggaaatgctag 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 71/84 (84%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 42 ctagtatttctcacatttatattgatgttaatgaatctagaca----tatatattcatta 97
|||| ||||| |||||| |||||||||| |||||||||||||| | || |||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagacagatgtctagattcattg 29
Query: 98 acatcaatataaatgtggaaaatg 121
|||||||||| ||||||| |||||
Sbjct: 28 acatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| |||||||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 71 aatgaatctagaca 84
||||||| ||||||
Sbjct: 64 aatgaatttagaca 77
Score = 50.1 bits (25), Expect = 1e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| |||| ||||||| |||||||||| | ||| ||||| ||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtctt-acattatgaaacgga 12
Query: 150 ggaagtata 158
|| ||||||
Sbjct: 11 gggagtata 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
||||||||||||||| |||||||| | |||||| ||| | |||||| |||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||| |||||||||||||||||||| |||| |||||| |||||||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataactt-acattgtgaaacggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
|||||||||||||||| |||||||||| ||||||| |||| |||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||| |||||||||||||||||||| |||| |||||| |||||||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataactt-acattgtgaaacggagggagta 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||||||||||||| |||||||||| ||||||| |||| |||||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| |||||| ||| | ||||| || || ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtt 63
Query: 71 aatgaatctagacatata 88
|||||||||| |||||||
Sbjct: 64 aatgaatctaaacatata 81
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatctagacatatatat 91
|||||||||||| ||||| |||||| ||||||||||||||| ||||||| | ||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatctaga 82
|||||||||||| ||||| |||||| ||||||||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 49
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 93 cattaacatcaatataaatgtggaaaatgctagaatgactt 133
||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 93 cattaacatcaatataaatgtggaaaatgctagaatgactt 133
||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||| |||||||||||||||||||| |||| |||||| |||||||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataactt-acattgtgaaacggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
|||||||||||||||| |||||||||| ||||||| |||| |||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
||||||||||||||| |||||||||| ||||||| |||| |||||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||| ||||||| |||||||||||| |||| |||||| |||||||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataactt-acattgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||||||||||| |||| | || || |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 72 atgaatctagacatatat 89
|||||||||||| |||||
Sbjct: 65 atgaatctagacttatat 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
|||| |||||||||| |||||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctag 103
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||||| | |||||||||| | ||| | |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | |||||| ||| | || ||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 72 atgaatctagacatat 87
||||||||||||||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 9 agatactccctccgtttcgcaatgtaagtcattctagtattt 50
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2 agatactccctccgtttcataatgtaagtcattctagtattt 43
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtggaaaatgctagaatgactta 134
||||||||||||| ||||||||||||||||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgactta 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
||||||||||| |||| ||| ||||||||||||| |||| || |||||||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 110 atgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||||| |||||||||||| ||||| |||||||||| |||||
Sbjct: 50 atgtggaaaatactagaatgactt-acattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||||||||||||| |||||||||||||||| |||| |||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 72 atgaatctagacatata 88
||||||||||||||||
Sbjct: 78 gtgaatctagacatata 62
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | |||||| ||| ||||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| |||| ||||| |||||||||| | |||| ||||| ||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtctta-cattgtgaaacgga 151
Query: 150 ggaagta 156
|||||||
Sbjct: 152 ggaagta 158
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| ||||||||| | |||||||||| ||||||||| | ||||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 75 aatct 79
|||||
Sbjct: 55 aatct 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| | ||||||||||| ||| |||||| | ||| |||||| ||||||||
Sbjct: 53 attcattaacatctaaataaatgtggacaatactagaaagcctt-acattgtgaaacgga 111
Query: 150 gg 151
||
Sbjct: 112 gg 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
||||||||||||||| ||||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctag 38
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatatt 64
|||| |||||||||| |||||||||||||| ||||||||| |||||| |||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcatt 41
||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 103 aatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||| ||||||| |||| ||| ||||||||| ||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgactta-cattgtgaaacggaggaagta 109
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||| ||| |||||| |||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 72 atgaatctagaca 84
|| ||||||||||
Sbjct: 80 ataaatctagaca 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaag 36
|||||||||||||||| |||||||||
Sbjct: 4 atactccctccgtttcacaatgtaag 29
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||| ||||| ||||||| ||||||||| ||| | ||||| |||| ||||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 71 aatgaatctagac 83
|||||||||||||
Sbjct: 73 aatgaatctagac 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 118 aatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||||||| ||||| |||||||||||||||
Sbjct: 42 aatgctagaatgactt-acattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
|||| |||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctag 38
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcac 55
||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct: 127 atacttcctccgtttcacaatgtaagtcattctagcatttctcac 83
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| ||||| ||||||| ||||| |||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 61.9 bits (31), Expect = 3e-09
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 117 aaatgctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 88 aaatgctagaatgactta-cattgtgaaacggaggaagtatat 129
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 96 taacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagt 155
|||||||||| | ||||||| |||||||||||| |||| | |||| |||||||||| |||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataactt-atattgtgaaacggagggagt 6
Query: 156 a 156
|
Sbjct: 5 a 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||| ||| | | |||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||| | |||||| ||| | |||||| | || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 72 atgaatctagacatatata 90
||||||||||||| |||||
Sbjct: 65 atgaatctagacacatata 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 84 atatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcga 143
||||| ||||||||||||| |||| |||| || |||||||||| | ||| |||||| ||
Sbjct: 87 atatagattcattaacatctatatgaatgcgggcaatgctagaaagtctt-acattgtga 145
Query: 144 aacggaggaagta 156
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||| ||| | ||||| || | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 72 atgaatctagacatata 88
|| ||||||||||||||
Sbjct: 98 ataaatctagacatata 82
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | || ||||||| | |||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 72 atgaatctagacatat 87
||||||||| ||||||
Sbjct: 65 atgaatctaaacatat 80
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | |||||| ||| | |||||| |||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 72 atgaatcta 80
|||||||||
Sbjct: 80 atgaatcta 72
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 85 tatatattcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaa 144
|||| ||||||||||||| |||| ||||||| |||||||||| | ||| ||||| |||
Sbjct: 70 tatagattcattaacatctatatgaatgtgggcaatgctagaaagtctt-acattatgaa 128
Query: 145 acggaggaagta 156
||||||| ||||
Sbjct: 129 acggagggagta 140
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgat 67
|||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttc-cacattcatattgat 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 101 tcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||| ||||||| ||||||||||||||||| | |||| |||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgactt-atattgtgaaacggaggaagta 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattga 66
|||| |||||||||| |||| ||||||||||||| ||||| |||||| |||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||||| |||||||||| |||||||||||||| | |||| |||||||||| |||||||
Sbjct: 59 atcaatatgaatgtggaaa-tgctagaatgactt-atattgtgaaacggagggagtatat 2
Query: 160 a 160
|
Sbjct: 1 a 1
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||| ||||||||| |||||||| | |||||| ||| || |||||||| ||||||
Sbjct: 138 atactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtt 79
Query: 71 aatgaatctagacata 86
||||||||||||||||
Sbjct: 78 aatgaatctagacata 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| |||||||| |||| ||||||||||
Sbjct: 72 attcattaacatctatataaatatggacaatgctagaa 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 18 ctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| |||||||| | |||||| ||| | ||||||||||| |||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagatgtta 64
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 63.9 bits (32), Expect = 6e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 109 aatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgactt-acattgtgaaacggagggagta 116
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtattt 50
||||||||||||||| |||||||||||||||||| ||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattt 78
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtattt 50
||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 113 tggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 47 tggaaaatgctagaatgactt-gcattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 9 agatactccctccgtttcgcaatgtaagtcattctagtat 48
||||||| |||||||||| |||||||||||||||||||||
Sbjct: 2 agatacttcctccgtttcacaatgtaagtcattctagtat 41
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 18 ctccgtttcgcaatgtaagtcattctagtatttctcacatttata 62
||||||||| |||||||||||||||||| ||||| |||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 105 tataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||||| | ||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 39 tataaatgtaggaaatgctagaatgactt-acattgtgaaacggagtaagta 89
Score = 48.1 bits (24), Expect = 4e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 122 ctagaatgacttaacattgcgaaacggaggaagtat 157
||||||||||||| ||||| ||||||||||||||||
Sbjct: 38 ctagaatgactta-cattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatat 63
||||||||||||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacatctatat 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| ||| |||||| ||| |||||||||||| ||||||||||||||||| || |||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 72 atgaatctagacatata 88
|||||||||| |||||
Sbjct: 65 gtgaatctagatatata 81
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 104 atataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||| |||||| ||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 77 atatagatgtgggaaatgctagaatgactt-acattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| ||||||||| | |||||| ||| | |||||| || | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 72 atgaatctagacatat 87
||||||||| ||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacat--ttatattgatgt 69
||||||||||||||| ||||||||| | || ||| ||| ||||||| ||||| ||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 70 taatgaatcta 80
|||||||||||
Sbjct: 100 taatgaatcta 90
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 63.9 bits (32), Expect = 6e-10
Identities = 123/153 (80%), Gaps = 9/153 (5%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | |||||| ||| | | ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 72 atgaatctagacata--------tatattcattaacatcaatataaatgtggaaaatgct 123
|||||||||| ||| || |||||||||||| |||| |||||||| ||||||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 124 agaatgacttaacattgcgaaacggaggaagta 156
|||| | ||| ||||| |||||||||||||||
Sbjct: 125 agaaagtctt-acattatgaaacggaggaagta 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||||||| | |||||| ||| |||||| |||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 72 atgaatctagaca 84
|||||||||||||
Sbjct: 96 atgaatctagaca 84
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 63.9 bits (32), Expect = 6e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 109 aatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||| |||||||||||||| |||||| |||||||||||||||
Sbjct: 51 aatgtggaaagtgctagaatgactt-acattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
|||| |||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| |||||||| | |||||| ||| |||||| |||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 72 atgaatctagacatatatat 91
|||||||||||||| |||||
Sbjct: 72 atgaatctagacatctatat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| |||| |||||||| ||||||||||
Sbjct: 67 attcattaacatctatatgaatgtggacaatgctagaa 104
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| |||| | |||||| ||| | ||||| |||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 72 atgaatctagacatat 87
||||||||| ||||||
Sbjct: 76 atgaatctaaacatat 61
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgactt 133
|||||||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 44 attcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 79/97 (81%), Gaps = 10/97 (10%)
Strand = Plus / Plus
Query: 34 aagtcattctagtatttctcacatttatattgatgttaatgaatctagacatatatattc 93
|||||||||||| ||||| |||||| ||||||||| ||||||||| ||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc----------gattc 50
Query: 94 attaacatcaatataaatgtggaaaatgctagaatga 130
|||| ||||||||| ||||||| ||||||||||||||
Sbjct: 51 attagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| |||| | |||||| ||| | ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 72 atgaatctagacatat 87
||||||||| ||||||
Sbjct: 65 atgaatctaaacatat 80
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatt-tctcacatttatattgatgt 69
||||| |||||||||| |||||||| | |||||| ||| ||| ||||| |||| |||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtct-acattcatatagatgt 62
Query: 70 taatgaatctagacatatat 89
||||||||||||||||||||
Sbjct: 63 taatgaatctagacatatat 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| |||| ||||| || |||||||||| | ||| ||||| ||||||||
Sbjct: 70 attcattaacatctatatgaatgtagacaatgctagaaagtctt-acattatgaaacgga 12
Query: 150 ggaagtat 157
||||||||
Sbjct: 11 ggaagtat 4
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| | | |||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 72 atgaatctagacatatatat 91
||||||||||||||||||||
Sbjct: 72 atgaatctagacatatatat 53
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 63.9 bits (32), Expect = 6e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 109 aatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||||| ||||||||||||||||| |||||| |||||||||||||||
Sbjct: 49 aatgtgggaaatgctagaatgactt-acattgtgaaacggaggaagta 95
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatt 58
|||| |||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 49
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttct 52
||||||||| ||||| |||||||||||||||||| ||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttct 45
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||| ||||| |||||||| | |||||| ||| | ||||||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| ||| |||||||| ||||||||||
Sbjct: 70 attcattaacatccataaaaatgtgggcaatgctagaa 33
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | |||||| ||| | |||||| || | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 72 atgaatctagacat 85
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||| ||| || || |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 72 atgaatcta 80
|||||||||
Sbjct: 98 atgaatcta 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||| | | || ||||||| |||||||||| | |||| ||||| ||||||||
Sbjct: 70 attcattaacaactaaatgaatgtgggtaatgctagaaagtctta-cattgtgaaacgga 12
Query: 150 ggaagta 156
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 103 aatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||| ||||||| ||||||||||||||||| | |||| |||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgactt-atattgtgaaacggaggaagta 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatatt 64
|||| |||||||||| |||| ||||||||||||| ||||| |||||| |||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 19 tccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatg 68
|||||||| |||| ||||||||||||| ||||| || ||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtggaaaatgctagaatgactta 134
||||||||| ||| ||| ||||||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgactta 26
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 1e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 110 atgtggaaaatgctagaatgacttaacattgcgaaacggaggaagtatat 159
|||||| ||||||||||||||||| |||||| | ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgactt-acattgtggaacggaggaagtatat 2
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctag 45
||||||||||||||| ||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctag 61
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacat 57
||||| |||||||| | |||||||||||||||||| ||||| |||||
Sbjct: 4 atacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| ||||||||| | || ||| || | |||||| || | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 71 aatgaatctagacatatatatt 92
||||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatgtatt 85
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| | | |||| | ||||| ||| | |||||| |||| |||| |
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
Query: 71 aatgaatctagacatatatat 91
|||||||||||||||||||||
Sbjct: 79 aatgaatctagacatatatat 59
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 47 atttctcacatttatattgatgttaatgaatctagacatatatat 91
||||| |||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 6 atttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 47 atttctcacatttatattgatgttaatgaatctagacatatatat 91
||||| |||||| ||||||||| |||| |||||||||||||||||
Sbjct: 111 atttcccacattcatattgatgctaataaatctagacatatatat 67
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||||||||| | |||||| ||| |||| || |||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | || ||| ||| | || ||| || | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 72 atgaatctagacatat 87
||||||||||||||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 40 ttctagtatttctcacatttatattgatgttaatgaatctagacatatatat 91
|||||| ||| | |||||| |||| |||| ||||||||||||||||||||||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatatat 79
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttc 51
|||| |||||||||| |||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 117 aaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||||||||||||||| ||||| |||||||||||||||
Sbjct: 43 aaatgctagaatgactta-cattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatt 58
|||||| |||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 91 tactccatccgtttcataatataagtcattttagcatttctcacatt 45
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatg 129
||||||||||| | |||| |||||||||||||||||||||
Sbjct: 40 attcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 38 cattctagtatttctcacatttatattgatgttaatgaatctagacatatatat 91
|||||||| |||| |||||| |||| | ||||||||||||||||||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatat 54
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| | | |||| | |||||| ||| | |||||| |||| |||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 72 atgaatctagacatat 87
||||||||||| ||||
Sbjct: 99 atgaatctagatatat 84
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| |||| ||||||| ||||||||||
Sbjct: 94 attcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||| ||||| ||| |||||| |||||| ||| |||| ||| |||| |||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| ||| |||| | |||||| ||| | || ||| |||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 80 atgaatctaga 70
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||| ||||| |||||||| | |||||| || | ||||||||||| ||| |
Sbjct: 4 atacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatact 63
Query: 71 aatgaatctagacatatat 89
|||||||||||||||||||
Sbjct: 64 aatgaatctagacatatat 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||||||| | |||||| ||| | |||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 72 atgaatctag 81
||||||||||
Sbjct: 98 atgaatctag 89
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 96 taacatcaatataaatgtggaaaatgctagaatgactta 134
||||||| |||||| |||||||||||||||||||||||
Sbjct: 64 taacatccttataaaggtggaaaatgctagaatgactta 26
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttata 62
|||||||| |||||| ||||||||||||||||| |||||| || ||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttcttacctttata 96
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||| ||||||||||||| |||| ||| |||||| ||||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcattttccacctttataaggatgtt 63
Query: 71 a 71
|
Sbjct: 64 a 64
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 53 cacatttatattgatgttaatgaatctagacatatatat 91
|||||| |||| ||||||||||||||||||||||||||
Sbjct: 12 cacattcatatatatgttaatgaatctagacatatatat 50
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||| ||| | ||||||||||| ||||||| || | ||| |||||| ||||||||
Sbjct: 91 attcattaatatctaaataaatgtggacaatgctaaaaagtctt-acattgtgaaacgga 149
Query: 150 ggaagta 156
|||||||
Sbjct: 150 ggaagta 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| | || ||| ||| ||||||||| | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 72 atgaatctagacatat 87
||||||||||| ||||
Sbjct: 96 atgaatctagatatat 81
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 65 gatgttaatgaatctagacatatatat 91
|||||||||||||||||||||||||||
Sbjct: 105 gatgttaatgaatctagacatatatat 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| |||| ||| | |||||| ||| | |||||| || | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 72 atgaatctagacatatatat 91
||||||||| ||| ||||||
Sbjct: 65 atgaatctaaacacatatat 84
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| | | |||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 127 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 68
Query: 71 aatgaatctagacat 85
|||||||||||||||
Sbjct: 67 aatgaatctagacat 53
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaatgacttaacattgcgaaacgga 149
||||||||||||| |||| ||||||| |||||||||| | ||| | | | ||||||||
Sbjct: 61 attcattaacatctatatgaatgtgggcaatgctagaaagtctt-ataatatgaaacgga 119
Query: 150 ggaagtatata 160
|||||||||||
Sbjct: 120 ggaagtatata 130
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 53 cacatttatattgatgttaatgaatctagacatatatat 91
|||||| |||| |||||||||||||||||||| ||||||
Sbjct: 22 cacattcatatagatgttaatgaatctagacacatatat 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 53 cacatttatattgatgttaatgaatctagacatatatat 91
|||||| |||| ||||| |||||||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatat 55
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| ||||||| | || ||| ||| | |||||| |||| ||||||
Sbjct: 143 atactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtt 84
Query: 71 aatgaatctagaca 84
||||||| ||||||
Sbjct: 83 aatgaatttagaca 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgt 69
||||||||||||||| |||||||| | |||||| ||| | |||||| |||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| |||| ||| ||| |||| || |||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 72 atgaat 77
||||||
Sbjct: 77 atgaat 72
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 15 tccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgttaatg 74
|||||||||||| |||||||| | |||||| ||| |||||| |||| |||||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 75 aatctagaca 84
||||||||||
Sbjct: 45 aatctagaca 36
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| |||||||||| ||||||||| |||| ||| ||| |||| || |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
|||||||||||||||| | | |||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 161 atactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 102
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 101 aatgaatcta 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 84 atatatattcattaacatcaatataaatgtggaaaatgctagaa 127
||||| ||||||||||||| |||| ||||||| ||||||||||
Sbjct: 76 atatagattcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 11 atactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtt 70
||||| |||||||||| | | |||| | |||||| ||| | |||||| |||| ||||||
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 63
Query: 71 aatgaatctagacatatat 89
|||||||||| | ||||||
Sbjct: 64 aatgaatctatatatatat 82
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 85 tatatattcattaacatcaatataaatgtggaaaatgctagaa 127
|||| ||||||||||||| |||| ||||||| ||||||||||
Sbjct: 90 tatagattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 40 ttctagtatttctcacatttatattgatgttaatgaatctagacatatat 89
|||||| ||| | |||||| |||| ||||||||||||||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| |||| ||||||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatatt 64
|||| |||||||||| |||||||||| ||| || |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 103 aatataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
||||| ||||||| |||| ||| ||| ||||| ||||| |||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataactta-cattgtgaaacggaggaagta 140
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
||||||||||||||| |||| |||| | ||||| |||| | |||||| || | |||||||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 72 atgaatcta 80
|| ||||||
Sbjct: 64 ataaatcta 56
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 9 agatactccctccgtttcgcaatgtaagtcattctag 45
||||||| |||||||||| || |||||||||||||||
Sbjct: 2 agatacttcctccgtttcacagtgtaagtcattctag 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 119 atgctagaatgacttaacattgcgaaacggaggaagtat 157
|||||||||||||||| || || ||||||||||||||||
Sbjct: 41 atgctagaatgactta-cactgtgaaacggaggaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 106 ataaatgtggaaaatgctagaatgacttaacattgcgaaacggaggaagta 156
|||||| | ||||||||||||||||||| | |||| ||||||||| |||||
Sbjct: 40 ataaatatagaaaatgctagaatgactt-atattgtgaaacggagtaagta 89
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 40 ttctagtatttctcacatttatattgatgttaatgaatctagacatat 87
|||||| ||| | |||||| |||| |||||||||||||||||| ||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatat 52
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 53 cacatttatattgatgttaatgaatctagaca 84
|||||| |||| ||||||||||||||||||||
Sbjct: 95 cacattcatatggatgttaatgaatctagaca 64
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| |||| ||||||| ||||||||||
Sbjct: 42 attcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcacatttatattgatgtta 71
|||| ||||||||| |||| |||| | ||||| ||| | ||||| ||||| |||||||
Sbjct: 134 tactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtta 75
Query: 72 atgaatctagacatatatat 91
||||||||| ||| ||||||
Sbjct: 74 atgaatctaaacacatatat 55
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtttcgcaatgtaagtcattctagtatttctcac 55
||||||||||||||| |||||||||| |||||| ||| |||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgctcac 40
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 40 ttctagtatttctcacatttatattgatgttaatgaatctagacatatatat 91
|||||| ||| | |||||| |||| ||||||||||||||||| ||||||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 40 ttctagtatttctcacatttatattgatgttaatgaatctagacatatatat 91
|||||| ||| | |||||| |||| ||||||||||||||||| || ||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 90 attcattaacatcaatataaatgtggaaaatgctagaa 127
||||||||||||| |||| ||||||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
