miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 210 bits (106), Expect = 4e-54
Identities = 139/150 (92%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| ||||| ||| ||||||||||||| ||||||
Sbjct: 9 tcctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||
Sbjct: 69 atctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||||||||| || |||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | |||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 93 tctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 200 bits (101), Expect = 4e-51
Identities = 128/137 (93%)
Strand = Plus / Minus
Query: 19 aatataagtcattctaacatttttcatattcatattgatattaatgaatctagatagata 78
|||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 141 aatataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagata 82
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||
Sbjct: 81 tatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacatt 22
Query: 139 gtaaaacggagggagta 155
|| ||||||||||||||
Sbjct: 21 gtgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || ||| |||||| | ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | | ||||||||||| |||||||| ||||||| |||| ||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| |||||||||||||
Sbjct: 130 atgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 136/149 (91%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||||| |||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||||
Sbjct: 93 tctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 161 bits (81), Expect = 3e-39
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||||||||| || |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| |||||||| ||||||| |||| ||||
Sbjct: 70 tctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 136/149 (91%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| |||||||||||||||||||||||||| ||||| ||| |||||| ||||| ||||
Sbjct: 93 tctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || ||||||| |||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | | ||||||||||| |||||||| |||||| |||| |||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 135/150 (90%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| |||||| || || ||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||||||||||||||||| || |||||| |||||| ||||| |||
Sbjct: 69 atctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||| || |||||||||| | ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| ||||||||| ||||| |||| ||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||||||||||||||||| |||||||| ||||||||| |||||| ||||| |||||
Sbjct: 70 tctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggaggaagta 158
Score = 147 bits (74), Expect = 5e-35
Identities = 131/150 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||||||| |||| || |||||||||||| |||||||
Sbjct: 154 tcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|| |||| | |||||| | ||||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 94 atgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 170 bits (86), Expect = 4e-42
Identities = 104/110 (94%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 48 attcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaat 107
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| |||||| |||| ||||||||||||||||||| ||||||||||||||
Sbjct: 108 atgaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
Score = 137 bits (69), Expect = 5e-32
Identities = 130/149 (87%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaa 93
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| |||||||| |||||| |||| ||||
Sbjct: 92 tctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|| ||||||||||||||||||||||||||
Sbjct: 33 ataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 134/150 (89%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||||||||||||| || ||||| || ||||||||| || |||||||
Sbjct: 9 tcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||
Sbjct: 69 atctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|||| |||| ||||| ||||||||||||||
Sbjct: 129 aatggcttatattgtgaaacggagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||| ||||||| ||||||||| ||| |||||||| |||||||
Sbjct: 153 cctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| ||| ||||| |||||| ||||| || |
Sbjct: 93 tctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatgctaca 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 121/133 (90%)
Strand = Plus / Minus
Query: 23 taagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatata 82
|||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 137 taagtcattctagcatttcccacattcatattgatattaatgaatctagatagatatata 78
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
||||||||||||||| |||||||||||||||| ||||| | ||||||||||||||| |
Sbjct: 77 tgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtga 18
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 127/150 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| | ||||| || ||| |||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||||| | ||||||||||||| |||||||| |||||| ||||| |||
Sbjct: 69 atctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| | ||||||||||||
Sbjct: 129 aatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 122/135 (90%)
Strand = Plus / Plus
Query: 21 tataagtcattctaacatttttcatattcatattgatattaatgaatctagatagatata 80
|||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||
Sbjct: 24 tataagtcattctagtattttccatattcatattgatgctaatgaatttagatagatata 83
Query: 81 tatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgt 140
||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||
Sbjct: 84 tatgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgt 143
Query: 141 aaaacggagggagta 155
|||||||||||||
Sbjct: 144 ggaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 19 aatataagtcattctaacatttttcatattcatattgatattaatgaatctagatagata 78
|||||||||||||||||||||| |||||||||||||||| ||||||||||| | | |||
Sbjct: 141 aatataagtcattctaacatttctcatattcatattgatgctaatgaatctaaacatata 82
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||| | |||| |||||||||||||||||| ||| || |||| |||||||||||| | |
Sbjct: 81 tatctatctaaattcattagcatcaatatgaatatggaaaatactagaatgacttatact 22
Query: 139 gtaaaacggagggagta 155
|| |||||||| ||||
Sbjct: 21 gtggaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||||| |||| || ||||||||| || |||||||
Sbjct: 9 tcctccgtttcacaatataagtcattctaactttttccacattcatattaatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||| |||||||| ||||||||||||| |||||||| |||||| ||||| |||
Sbjct: 69 atctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||| ||||| ||||||||||||||
Sbjct: 129 aatgacttatattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||| |||||| | ||||||||||||| ||| ||||| |||||| ||| |||||
Sbjct: 93 tctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaagttaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || ||||||| | ||||||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 69 atctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaa 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||| || ||||| ||| || ||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| |||||||||||||| || | ||| |||||| ||||| ||||
Sbjct: 93 tctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || ||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||| ||
Sbjct: 69 atctagatagatatatatttctagattcattaccatcaatattaatgtgggaaattctaa 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||| ||||| ||||||||||||||
Sbjct: 129 aatgacttagattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||| || |||| || ||| |||||||| |||||||
Sbjct: 153 cctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| | ||||||| |||||| ||||| ||||
Sbjct: 93 tctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||| | ||||||||||||||||||||||| ||| ||||| |||||||||||| |||
Sbjct: 69 atctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||| ||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| |||||||||||| |||| |||| ||| || | ||| ||||
Sbjct: 93 tctagacatatatatccaactagattcattaacatccatatgaatatgggtaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||||||||||||| || ||||| || ||||||||| || |||||||
Sbjct: 154 tcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||||||||||||||||| ||||||||| |||||| | ||| ||
Sbjct: 94 atctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctat 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||| || |||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| ||| ||||| |||||| ||||| || |
Sbjct: 70 tctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaa 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 130 atgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/150 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| ||| |||||||| |||||||
Sbjct: 154 tcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||
Sbjct: 94 atctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| | |||| |||||||||||| ||||
Sbjct: 70 tctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/150 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| |||||| || |||| ||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||||||||||||||||||||||||||||||||||| ||| | |||| |||
Sbjct: 69 ctctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||| ||||| ||||||||||||||
Sbjct: 129 aatgacttatattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| |||||| |||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | |||||| |||||| |||||||| |||||| |||| ||||
Sbjct: 93 tctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 155 bits (78), Expect = 2e-37
Identities = 133/150 (88%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| ||||| ||| |||||||||||| ||||| ||| |||||||||||| ||||||
Sbjct: 9 tcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||||| |||||| ||||||||||||| ||| ||||||||| || ||||| ||||
Sbjct: 69 atctagataga-atatatatctagattcattaacattaatataaatatgggaaatgttag 127
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 128 aatgacttacattgtgaaacggagggagta 157
Score = 137 bits (69), Expect = 5e-32
Identities = 130/149 (87%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||||||||| |||||| ||||| || ||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaa 93
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||| |||| | | ||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 92 tctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/150 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 154 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||| |||||||||| ||||||||||| ||||||||| ||| || |||| |||
Sbjct: 94 atctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| | | |||||| | ||||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 70 tctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||| | ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| | ||
Sbjct: 70 tctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtgga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||| ||||||
Sbjct: 130 atgacttacattatgaaacggaaggagta 158
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Minus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||||||| |||||||||| | ||||| || |||||||||||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctag 89
Query: 72 atagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgac 131
| | |||||| | ||||||||||||| || |||||| |||||| ||||| |||||||||
Sbjct: 88 acatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgac 29
Query: 132 ttacattgtaaaacggagggagta 155
||||||||| ||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||| || |||||| || ||||||||| |||||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
| ||| || |||||||||||||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 70 tttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||| ||| |||| || ||||| |||||| |||| || |
Sbjct: 93 tctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctata 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||| |||| || ||||||||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||||||||||||||||||||||||| ||||| |||| |||||| |||| ||||
Sbjct: 93 tctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||||| || |||||||| ||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||||||||||||| |||||| ||| ||||
Sbjct: 70 tctagacatatatatctatctagattcattagcatcaatatggatgtgaacaatagtaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||||||||
Sbjct: 130 atgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| | |||||| ||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||| ||||||
Sbjct: 33 atgacttacattgtgaaacggaaggagta 5
Score = 151 bits (76), Expect = 3e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||| ||| |||||||||||| ||||| ||| |||||||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Query: 72 atagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgac 131
|||||||||||||||||||||||||| ||||| || ||| | |||| |||||||||
Sbjct: 75 atagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgac 134
Query: 132 ttacattgtaaaacggagggagta 155
||||||||| ||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 153 bits (77), Expect = 8e-37
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatat----tgatatta 61
||||| |||||| ||| |||||||||||| ||||| |||||||||| |||| |||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgtta 68
Query: 62 atgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaatt 121
|||||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||||
Sbjct: 69 atgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 128
Query: 122 ttagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 129 ctagaatgacttacattgtgaaacggagggagta 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/153 (83%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || ||||||| |||| ||||||||
Sbjct: 157 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 98
Query: 67 tctagatagatatatatgtctagattcattagcatca----atataaatgtgagaaattt 122
|||||| | |||||| | ||||||||||||| ||||| ||| ||| || |||||
Sbjct: 97 tctagacatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgc 38
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 147 bits (74), Expect = 5e-35
Identities = 101/110 (91%)
Strand = Plus / Plus
Query: 24 aagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatatat 83
||||||||||| ||||| ||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 84 gtctagattcattagcatcaatataaatgtgagaaattttagaatgactt 133
|||||||||||||| ||||||||| |||||| ||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 24 aagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatatat 83
||||||||||| ||||| || |||||||||||| |||||||||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 84 gtctagattcattagcatcaatataaatgtgagaaattttagaatgactt 133
||||||||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 131/150 (87%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||||||||| ||||||| |||||||| ||||||||| |||| | | || |||
Sbjct: 69 atctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||| || | |||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
| |||| | ||||| | ||||||||||||| ||||||||| ||| | ||||| ||||
Sbjct: 93 tatagacatctatatctatctagattcattaacatcaatatgaatataggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||||||| || ||||| ||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||| ||||||||||||||||||||| ||||| |||| |||||| |||| ||||
Sbjct: 93 tctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||||| || |||||||| ||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | |||||||||||||||||| |||| |||||| |||| ||||
Sbjct: 70 tctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaatactaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||||||||
Sbjct: 130 atgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 139 bits (70), Expect = 1e-32
Identities = 131/150 (87%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||| | ||| |||||| ||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 69 atctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctag 127
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 128 aatgacttacattgtgaaacggagggagta 157
Score = 121 bits (61), Expect = 3e-27
Identities = 128/149 (85%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| | | || ||| || |||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 92 tctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 139 bits (70), Expect = 1e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || ||| |||||||| ||||| ||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| |||||||||||||||||||||||||| ||||||||| ||| || ||||| | ||
Sbjct: 93 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||| | ||||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | | |||||| |||| ||||||||||||||| ||||| ||||
Sbjct: 70 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 127
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 128 atgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 97/106 (91%)
Strand = Plus / Plus
Query: 50 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 109
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 110 atgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||||| ||||||| |||||||||| ||||||||||||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 128/150 (85%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||| ||||||| |||| || |||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaat-gtgagaaattttag 125
|||||| | |||||| | ||||||||||||| ||||||||| | |||| |||| |||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatttctagtga-aaatactag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 139 bits (70), Expect = 1e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || ||| |||||||| ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 67
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| |||||||||||||||||||||||||| ||||||||| ||| || ||||| | ||
Sbjct: 68 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 127
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 128 atgacttacattgtgaaacggagggagta 156
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||| | ||||| ||||||||||||||| ||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 92
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | | |||||| |||| ||||||||||||||| ||||| ||||
Sbjct: 91 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 130/150 (86%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| || ||||||||| | |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||||||||||||||||||||| ||| ||||| |||||| ||| |||
Sbjct: 69 atctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||| | || ||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | ||||||||||||| || ||||| |||||| ||||| || |
Sbjct: 93 tctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaa 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||| | ||| ||||||||||| || ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | | ||||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 127 atgacttacattgtaaaacggaggga 152
|||||||||||||| |||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
Score = 119 bits (60), Expect = 1e-26
Identities = 124/146 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||| |||||||||||| | ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||| |||||||||||||| ||||||| ||||||||| || ||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 127 atgacttacattgtaaaacggaggga 152
|||||||||||||| |||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 122/140 (87%)
Strand = Plus / Plus
Query: 16 cataatataagtcattctaacatttttcatattcatattgatattaatgaatctagatag 75
|||||| |||||||||||||||||| || |||||||| | | ||||||||||||||||
Sbjct: 19 cataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatat 78
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
||||| |||||||||||||||| || | |||| |||||| |||| |||||||||||||
Sbjct: 79 atatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttac 138
Query: 136 attgtaaaacggagggagta 155
||||| ||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || |||||||| | | ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | ||||||| ||||||||||||| || | |||| |||||| ||||| |||||
Sbjct: 93 tctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | |||||| ||||||
Sbjct: 33 atgacttacattatggaacggaaggagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 135 bits (68), Expect = 2e-31
Identities = 130/150 (86%), Gaps = 3/150 (2%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 9 tcctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||||||||| |||||||| |||| |||||||||| |||||| ||||| | |
Sbjct: 69 atctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatggtgg 125
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 126 aatgacttacattatgaaacggagggagta 155
Score = 93.7 bits (47), Expect = 7e-19
Identities = 124/149 (83%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||| | ||||| || |||||||||||| |||| |
Sbjct: 150 cctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatgga 91
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| ||||| | |||||||||||||| |||||||| |||||| ||||| ||||
Sbjct: 90 tctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaatactaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 130/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| ||| || ||| |||||||||||| |||||| | |||||||||||| |||||||
Sbjct: 9 tcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|| |||| | ||||||||||||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 69 atgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctag 126
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| |||||||||||||
Sbjct: 127 aatgacttacattgtggaacggagggagta 156
Score = 107 bits (54), Expect = 4e-23
Identities = 114/133 (85%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 23 taagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatata 82
|||||||||||| ||||| || |||||||||||| ||||||||||||| | |||||||
Sbjct: 135 taagtcattctagcatttcccacattcatattgatgttaatgaatctag--acatatata 78
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
|||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 77 tgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtgg 18
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 131 bits (66), Expect = 3e-30
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 24 aagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatatat 83
||||||||||| ||||| || |||||||||||| |||||||||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 84 gtctagattcattagcatcaatataaatgtgagaaattttagaatgactt 133
|||||||||||||| ||||||||| |||||| ||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 24 aagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatatat 83
||||||||||| ||||| || |||||||||||| |||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 84 gtctagattcattagcatcaatataaatgtgagaaattttagaatgactt 133
| ||||||||||| ||||||||| |||||| ||||| |||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| || ||||||||| || ||||| || ||| |||||||| |||||||
Sbjct: 154 tcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||||| |||||||||||||||||| | |||||||||||||||| ||||| |
Sbjct: 94 atctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgcaaa 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
|||||||||| |||| ||||||||||||||
Sbjct: 34 aatgacttactttgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 91/106 (85%)
Strand = Plus / Plus
Query: 50 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 109
|||||||| || ||||||||||| | |||| | | ||||||||||||| |||||||||||
Sbjct: 53 atattgatgtttatgaatctagacatatatttctatctagattcattaacatcaatataa 112
Query: 110 atgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||||| || |||||||||| |||| ||||||||| ||||
Sbjct: 113 atgtgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||||||||||||| |||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| | |||||||||| || ||||||||||||| |||| |||||| |||| ||||
Sbjct: 70 tctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || |||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
| || | | |||||| || |||||||||||||||| |||| ||| | |||| |||||
Sbjct: 93 tttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || |||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| ||||||||| ||||||||||||||||| |||| |||||| ||| ||||
Sbjct: 93 tctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
||||| |||||||| ||||||||| ||||
Sbjct: 33 atgacatacattgtgaaacggaggaagta 5
Score = 123 bits (62), Expect = 7e-28
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| || ||||||||| |||| | || |||||||| ||| ||||||
Sbjct: 9 tcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||| | ||||||| |||||||||||||| ||||||||| |||||| |||| |||
Sbjct: 69 atctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||| ||| || |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| ||| ||||| |||||||||||||||| |||| |||| |||||||||||| || |
Sbjct: 93 tctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaa 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||| ||| ||||||||||||||
Sbjct: 33 atgacttacaatgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 23 taagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatata 82
||||||||| || ||||| ||| |||||||| ||| |||||||||||||| | ||||||
Sbjct: 26 taagtcattttatcatttctcacattcatatagatgttaatgaatctagacatctatata 85
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
| | ||||||||| | |||| |||| |||||| ||||| |||||||||||||||||| |
Sbjct: 86 tatttagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtga 145
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| |||||||||| || ||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| ||||||||||||||||||||||| || | || |||| |||||| ||||| ||||
Sbjct: 70 tctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagt 154
|||||||||||| | |||||||||||||
Sbjct: 130 atgacttacattatgaaacggagggagt 157
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| || |||||||| || ||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||| | | |||||||| || | || |||| ||| | ||||| ||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 125 bits (63), Expect = 2e-28
Identities = 84/91 (92%)
Strand = Plus / Minus
Query: 65 aatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaatttta 124
||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 125 gaatgacttacattgtaaaacggagggagta 155
|||||||||||||| | ||||||||||||||
Sbjct: 35 gaatgacttacattatgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagatt 92
|||||| | |||||| | ||||||||
Sbjct: 70 tctagacatatatatctatctagatt 95
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 128/150 (85%), Gaps = 6/150 (4%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 69 atctagata------tatgtctagattcattagcatcaatatgaatgtaggaaatgctag 122
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||| ||||| ||||||||||||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152
Score = 115 bits (58), Expect = 2e-25
Identities = 126/149 (84%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||||| | |||||||||||| |||||||
Sbjct: 147 cctccgtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaa 88
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||| |||||||||||||||||||||| |||||| ||||| ||||
Sbjct: 87 tctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 123 bits (62), Expect = 7e-28
Identities = 128/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||||||| |||| ||| |||||||||| |||||||||||| ||| ||||| ||||
Sbjct: 70 tctagataggcatat--gtccagattcattaacatcaatataaacgtgggaaatgctaga 127
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 128 atgacttatattgtgaaacggaggaagta 156
Score = 109 bits (55), Expect = 1e-23
Identities = 127/150 (84%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| ||||| || || |||||||| |||||||
Sbjct: 152 tcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatga 93
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||| || | || ||| |||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 92 atctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | |||||||||||||||||||||| |||| |||| |||||| | ||| ||||
Sbjct: 93 tctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
| |||||||||| | ||||||||| ||||
Sbjct: 33 aagacttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/150 (83%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||| ||||| ||| || |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||||| ||||||||||||||| |||| |||| ||| |||| ||| |||
Sbjct: 69 atctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 129 aaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||||||| ||||||| | || ||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaa 92
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||||| ||||||||||||| |||||||| ||| | ||| |||||| ||||| |||
Sbjct: 91 tctagat--atatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||| ||||| ||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 127/150 (84%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||||||||||||||| ||||| || ||||||| | || |||||||
Sbjct: 9 tcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|| |||| | |||||||| |||||||||||| ||| | ||| ||||||| |||| |||
Sbjct: 69 atttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatgctag 126
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 127 aatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 115 bits (58), Expect = 2e-25
Identities = 126/149 (84%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| || |||||||||||| | ||||||
Sbjct: 147 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaa 88
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| |||| ||||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 87 tctagacagat------gtctagattcattgacatcaatatgaatgtgggaaatgataga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 125/150 (83%), Gaps = 6/150 (4%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| | |||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | | |||||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 69 atctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaatgctag 122
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 123 aatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 127/150 (84%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| || | ||| |||||||| ||| |||||||
Sbjct: 154 tcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||| || | ||||||||||||||||| |||| |||| ||| | | ||| |||
Sbjct: 94 atctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||| |||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | | | |||| ||||||||||||| |||| |||| |||||||| | | ||||
Sbjct: 70 tctagacatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||| ||||
Sbjct: 130 atgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 113 bits (57), Expect = 7e-25
Identities = 125/149 (83%), Gaps = 9/149 (6%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 85
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| |||||||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 84 tctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 125/150 (83%), Gaps = 9/150 (6%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | ||||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 69 atctagacat---------tctagattcattaacatcaatatgaatgtgggaaatgctag 119
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 120 aatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||| |||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||| | | |||| ||||||||||||| |||| |||| |||||||| | | ||||
Sbjct: 93 tctagatatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 126/150 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| || | ||| |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||| || | ||| ||||||||||||| |||| |||| ||| | | ||| |||
Sbjct: 69 atctagatatatgtctatatctagattcattaacatctatatgaatataggcaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 129 aatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 113 bits (57), Expect = 7e-25
Identities = 127/149 (85%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||||||||||||| || |||||| || ||| |||||||| |||||||
Sbjct: 147 cctccgtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaa 88
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||| ||||||| |||| |||||||||||||||| |||||||||||||| || |
Sbjct: 87 tctag--agatata----tctaaattcattagcatcaatgtaaatgtgagaaatgctaaa 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 124/150 (82%), Gaps = 6/150 (4%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| ||| ||| | |||||| ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|| |||||| ||| |||||||||||||||||||||||||||||| |||| ||
Sbjct: 69 atttagata------tatctctagattcattagcatcaatataaatgtggaaaatgctaa 122
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||| ||||| ||||||||||||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||| || ||||||||| |||||||| ||| ||||||||
Sbjct: 151 cctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaa 92
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| | |||||||||||| ||||||||| |||| | || |||||| ||||| || |
Sbjct: 91 tcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaa 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 123/150 (82%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| || |||||| | ||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||| ||| | |||||||| ||||||||||| |||| |||| ||||||| |||| ||
Sbjct: 69 atcaagaca--tatatatgcatagattcattaacatctatatgaatgtgaaaaatgctaa 126
Query: 126 aatgacttacattgtaaaacggagggagta 155
|||||||| |||| | ||||||||||||||
Sbjct: 127 aatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 126/150 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| | || ||||| ||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||| | | |||||| ||||||||||| |||| |||| |||||| | ||| ||
Sbjct: 69 atctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatgctaa 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 129 aatgacttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 119/149 (79%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| ||||||||| || |||| || |||||||| ||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| | | || | ||| ||||||||||||| |||| |||| || || | || ||||
Sbjct: 93 tctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaaggctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 139 gtaaaacggagggagta 155
|| ||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| ||||||| |||||||| ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatga 68
Query: 66 atctaga 72
|||||||
Sbjct: 69 atctaga 75
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 96 tagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||||| |||||| |||| || ||||||||| ||||| ||||||||||||||
Sbjct: 80 tagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 118/142 (83%), Gaps = 12/142 (8%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| |||||| |||||||||||||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaa 82
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| || |||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 81 tctacat------------ctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 127 atgacttacattgtaaaacgga 148
|||||||||||||| |||||||
Sbjct: 33 atgacttacattgtgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 117/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||| ||| |||||||||||| ||||| ||| |||||||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 72 atagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgac 131
| | ||||||||||| |||||||||||| || |||| |||||||||
Sbjct: 75 a------------tgtagattcattaatatcaatataaatatggaaaatgctagaatgac 122
Query: 132 ttacattgtaaaacggagggagta 155
||||||||| ||||||||||||||
Sbjct: 123 ttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 124/150 (82%), Gaps = 12/150 (8%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| |||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||| ||||||| ||||||| ||||||||| |||||| ||||| |||
Sbjct: 69 atcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatgctag 116
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| |||| |||||||||
Sbjct: 117 aatgacttacattgtgaaaccgagggagta 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| ||||||||| |||||| |||| |||||||||||||||| | |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 147 gagggagta 155
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
||||||||||||||| ||||||||| || ||||||||| ||||| | ||| ||| ||||
Sbjct: 153 cctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | ||||| || |||||||| || |||| |||| ||| |||||||| ||||
Sbjct: 93 tctagacatatatacatacttagattcactaacatctatatcaatatgagaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| ||||||| |||| ||| ||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| || |||||||||||||||||| || |||| | | ||||||| |||| || |
Sbjct: 70 tctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctaca 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | |||| |||||||||
Sbjct: 130 atgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 92/104 (88%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 52 attgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataaat 111
|||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 48 attgatgttaatgaatctagatagatat--atgtctagattcattaacatcaatatgaat 105
Query: 112 gtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| ||||| || ||||||||| ||||| ||||||||||||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 87.7 bits (44), Expect = 4e-17
Identities = 86/99 (86%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||||||||||||| || ||||| ||||||||||||||| ||||||||
Sbjct: 144 cctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaa 85
Query: 67 tctagatagatatatatgtctagattcattagcatcaat 105
||||| | |||||| | ||||||||||||| |||||||
Sbjct: 84 tctag--acatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 105 bits (53), Expect = 2e-22
Identities = 120/144 (83%), Gaps = 10/144 (6%)
Strand = Plus / Minus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||| ||| |||||||||||| ||||| || |||||||||||| |||||||||
Sbjct: 138 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat---- 83
Query: 72 atagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgac 131
|||||||||||||||||||| ||| |||||||||||| ||||| |||||||||
Sbjct: 82 ------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 132 ttacattgtaaaacggagggagta 155
||||||||| ||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 121/150 (80%), Gaps = 10/150 (6%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || ||| ||||| || |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||||| |||||| ||||||||| |||||| ||||| |||
Sbjct: 69 atctagacatatatat----------tcattaacatcaatatgaatgtgggaaatgctag 118
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| |||||| |||||||
Sbjct: 119 aatgacttacattgtgaaacggggggagta 148
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 103 bits (52), Expect = 7e-22
Identities = 119/144 (82%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 81
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| ||||||| |||| |||||||||||||||||||||| ||||
Sbjct: 80 tctaga-------------ctagatttattaacatcaatataaatgtgagaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagg 150
|||||||||||| | |||||||||
Sbjct: 33 atgacttacattatgaaacggagg 10
Score = 83.8 bits (42), Expect = 6e-16
Identities = 121/150 (80%), Gaps = 13/150 (8%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| ||||| ||| ||| |||||||| ||||| |
Sbjct: 9 tcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataa 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||| ||||||||||||| ||||||||| ||| || |||| |||
Sbjct: 69 atctag-------------tctagattcattaacatcaatatgaatatggaaaatgctag 115
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 116 aatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 77 tatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttaca 136
||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 137 ttgtaaaacggagggagta 155
|||| ||||||||| ||||
Sbjct: 23 ttgtgaaacggaggtagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 67 tctaga 72
||||||
Sbjct: 70 tctaga 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 108 tagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 120/149 (80%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| |||| |||||||||||||||||| ||||| |||| ||||
Sbjct: 70 tctaga------------tctaaattcattagcatcaatatgaatgtagaaaatgctaga 117
Query: 127 atgacttacattgtaaaacggagggagta 155
|||| ||||||||| ||||||||||||||
Sbjct: 118 atgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 126/150 (84%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| ||||||||||||||||||||||| |||| || |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||| | | |||||| || ||||||||||||| ||| ||| |||||| | ||| |||
Sbjct: 69 atctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatcctag 126
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||| ||||| ||||||||||||||
Sbjct: 127 aatgacttatattgtgaaacggagggagta 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 117/144 (81%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||| || |||| ||| |||| |||||||
Sbjct: 151 cctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaa 92
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||| | ||||||||| |||||||||| |||| |||| |||||| | ||| ||||
Sbjct: 91 tctag--ccacatatatgtccagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 127 atgacttacattgtaaaacggagg 150
|||||||| ||| | |||||||||
Sbjct: 33 atgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||| |||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 126 cggagggagta 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 131 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 72
Query: 67 tctagatagatat 79
|||||||||||||
Sbjct: 71 tctagatagatat 59
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatat 59
||||| |||||| ||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| ||| || ||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||||||||||||||||||||||| || |||||||||||| |||||||
Sbjct: 135 tcctccgtttcataatataagtcattctaacattttccacattcatattgatgttaatga 76
Query: 66 atctaga 72
|||||||
Sbjct: 75 atctaga 69
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 139 gtaaaacggagggagta 155
| ||||||||| ||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||||||| |||||||||||| ||||||||| ||| || |||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttttcacatttatgttgat 60
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/150 (83%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| |||| || || ||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|| |||||| | || | ||||||||||||||| |||| |||| ||| || | ||| |||
Sbjct: 69 atttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 129 aatgacttacattatgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||| ||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | | || ||| |||| |||||||| |||| |||| ||||| | ||| ||||
Sbjct: 93 tctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 124/149 (83%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| | |||| || |||||||||||| |||||||
Sbjct: 147 cctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgag 88
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
| |||||||||| |||||||||||| ||||||||| |||||| |||| ||||
Sbjct: 87 tttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 122/150 (81%), Gaps = 6/150 (4%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| |||||| || |||||||||||| |
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt------ 62
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | || ||| | |||| | |||||| ||||||||| |||||| ||| |||
Sbjct: 63 atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggctag 122
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 123 aatgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||| ||||||| ||||||||| |||||||||||| |||||||
Sbjct: 126 tcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaatga 67
Query: 66 atctagatagatat 79
||||||||||||||
Sbjct: 66 atctagatagatat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| ||||||| |||| ||||||| |||||||| | |||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||||| ||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatat 53
|||| |||||| |||||||||||||||| ||||| || ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 97.6 bits (49), Expect = 4e-20
Identities = 88/100 (88%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 56 atattaatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtga 115
||||||||| |||||||||||||| |||||||||| ||||| ||||||||| ||||||
Sbjct: 32 atattaatggatctagatagatat--atgtctagatccattaacatcaatatgaatgtgg 89
Query: 116 gaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||||||||||||| | ||||||||| ||||
Sbjct: 90 gaaatgctagaatgacttacattatgaaacggaggaagta 129
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| ||||| || |||||||||||| ||||||
Sbjct: 125 tcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatgg 66
Query: 66 atctaga 72
|||||||
Sbjct: 65 atctaga 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 130 acttacattgtaaaacggagggagta 155
||||||||||| ||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| ||||||||||||||| | ||||| ||| ||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||||| ||| |||||||||||||||||| |||| |||| |||||| ||| || |
Sbjct: 70 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 129
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||||| ||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||||| | || ||||| ||||| ||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 55
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| ||| || | ||| ||||| | |||| ||| | ||||||||||||||
Sbjct: 54 atgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 125/150 (83%), Gaps = 9/150 (6%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| |||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||| | || | ||| ||||||| ||||||||| |||||||||||| |||
Sbjct: 69 atctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaatgctag 119
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| |||| |||||||||
Sbjct: 120 aatgacttacattgtgaaaccgagggagta 149
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| ||||||||| |||||| |||| |||||||||||||||| | |||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 147 gagggagta 155
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||| |||||||||||| ||||||||
Sbjct: 144 cctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaa 85
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 71 gatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatga 130
|||||||| || | |||||||| |||| ||||||||||||| |||||||| ||||||||
Sbjct: 61 gatagatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatga 120
Query: 131 cttacattgtaaaacggagggagta 155
|||||||||| ||||||||||||||
Sbjct: 121 cttacattgtgaaacggagggagta 145
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||||||| |||||||| ||||| ||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaa 81
Query: 67 tctagatagat 77
|||||||||||
Sbjct: 80 tctagatagat 70
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 139 gtaaaacggagggagta 155
|| ||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Query: 66 atctaga 72
|||||||
Sbjct: 69 atctaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 130 acttacattgtaaaacggagggagta 155
||||||||||| ||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 117/142 (82%), Gaps = 12/142 (8%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||| || |||||| |||||| |||||||||||||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaa 82
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| || |||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 81 tctacat------------ctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 127 atgacttacattgtaaaacgga 148
|||||||||||||| |||||||
Sbjct: 33 atgacttacattgtgaaacgga 12
Score = 77.8 bits (39), Expect = 4e-14
Identities = 116/144 (80%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||| ||| |||||||||||| ||||| ||| |||||||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 72 atagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgac 131
| | ||||||||||| |||||||||||| || |||| || ||||||
Sbjct: 75 a------------tgtagattcattaatatcaatataaatatggaaaatgctataatgac 122
Query: 132 ttacattgtaaaacggagggagta 155
||||||||| ||||||||||||||
Sbjct: 123 ttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| ||||||||||||||| | ||||| ||| ||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||||| ||| |||||||||||||||||| |||| |||| |||||| ||| || |
Sbjct: 93 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 34
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||||| ||||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||||| | || ||||| ||||| ||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 108
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| ||| || | ||| ||||| | |||| ||| | ||||||||||||||
Sbjct: 109 atgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||| |
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 135 aacggagggagta 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 94 attagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggag 153
|||| ||||||||||||||||| |||| || ||||||||||||||| |||| |||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 154 ta 155
||
Sbjct: 6 ta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||||||| || |||| ||| |||||||||||| ||||||||
Sbjct: 142 cctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaa 83
Query: 67 tctaga 72
||||||
Sbjct: 82 tctaga 77
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 121 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaa 62
Query: 67 tcta 70
||||
Sbjct: 61 tcta 58
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| |||||||| ||| |||||||| |||||||||||||||| | |||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 147 gagggagta 155
|||||||||
Sbjct: 118 gagggagta 126
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||||| |||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatatt 54
||||| |||||| |||||||||||||||| |||||| || ||| |||||
Sbjct: 9 tcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
|||||| ||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 140 taaaacggagggagta 155
| |||||||| |||||
Sbjct: 20 tgaaacggagagagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatcta 70
|||||| ||| |||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| |||| ||||||| |||||||| ||||||
Sbjct: 9 tcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgataatga 68
Query: 66 atctagatagatatatatgt 85
||||||||||||||||||||
Sbjct: 69 atctagatagatatatatgt 88
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||| | ||||||||||||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 136 attgtaaaacggagggagta 155
||||| ||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 99 aatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||| |||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 120/149 (80%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||| |||||| ||||||||| |||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| |||| |||||||||||||||||||||||| |||| || |
Sbjct: 70 tctaga------------tctaaattcattagcatcaatataaatgtagaaaatgctaaa 117
Query: 127 atgacttacattgtaaaacggagggagta 155
|||| ||||||||| ||||||||||||||
Sbjct: 118 atgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgga 148
||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 149 gggagta 155
|||||||
Sbjct: 11 gggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgga 148
||||||||||||||||||| |||||| ||||| |||||||||||||||| | |||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 149 gggagta 155
|||||||
Sbjct: 132 gggagta 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 69
Query: 67 tc 68
||
Sbjct: 70 tc 71
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| |||||| ||||| ||||||||||||| ||||| |||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 125 cggagggagta 135
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 130 cctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaa 71
Query: 67 tctagata 74
||||||||
Sbjct: 70 tctagata 63
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||| |||||| |||||||||||||||| |||||| || ||||||||||||
Sbjct: 9 tcctccgtttcacaatataagtcattctagcattttccacattcatattgat 60
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||| |||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| |||||||| |||||||||||| |||||||||||||||||| |||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaa 69
Query: 67 tctagata 74
||||||||
Sbjct: 70 tctagata 77
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
|||||||||||||||||| ||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 139 gtaaaacggaggga 152
|| |||||||||||
Sbjct: 122 gtgaaacggaggga 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggaggga 152
||||||||| |||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||| ||||||||| || | ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 67 tctaga 72
||||||
Sbjct: 73 tctaga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| ||| |||||||||||| ||||| ||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatga 68
Query: 66 atctagatag 75
|| |||||||
Sbjct: 69 atgtagatag 78
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
|||| |||||||| ||||||||| ||| || |||| ||||||||||||||||||| |||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 131 cctccgtttcataatgtaagtcattttagtatttttcatattcatattgat 81
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| ||| ||| |||| || ||||||||||||| | ||||||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 91.7 bits (46), Expect = 3e-18
Identities = 123/149 (82%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || |||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgag 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
| |||||||||| |||||||||||| ||||||||| ||| || |||| ||||
Sbjct: 70 tttagatagatacatatgtctagat------acatcaatatgaatatggaaaatgctaga 123
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 124 atgacttacattgtgaaacggaggaagta 152
Score = 85.7 bits (43), Expect = 2e-16
Identities = 123/150 (82%), Gaps = 6/150 (4%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| |||||| ||||||||||||||| |
Sbjct: 148 tcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt------ 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | || ||| | |||| | |||||| |||| |||| |||||| |||| |||
Sbjct: 94 atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||||||||||||||||||||||||||| |||||| || ||||||| |||| ||||||
Sbjct: 9 tcctctgtttcataatataagtcattctagcattttccacattcatactgatgctaatga 68
Query: 66 atctagatag 75
||||||||||
Sbjct: 69 atctagatag 78
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||| ||||| || ||||||||||||| | ||||||||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||||||||| ||| |||||| |||| |||||||||||| ||| | |||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 145 cggagggagta 155
| |||| ||||
Sbjct: 15 cagaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||||||| ||||||||| || ||||| || ||||||||||||
Sbjct: 133 cctccgtttcataatgtaagtcattgtagcatttcccacattcatattgat 83
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/150 (82%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| |||| || || |||| ||| |||||||
Sbjct: 154 tcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|| |||||| | || | ||||||||||||||| |||| |||| ||||| | ||| |||
Sbjct: 94 atttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||| | |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | | || ||| |||| |||||||| |||| ||||| ||||| | ||| ||||
Sbjct: 70 tctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||| | ||||||||| ||||
Sbjct: 130 atgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 86 ctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaac 145
|||||||||||||||||||||| || |||| |||| |||||||||||||||||| ||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 146 ggagggagta 155
||||||||||
Sbjct: 122 ggagggagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 126 cctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaa 67
Query: 67 tctag 71
|||||
Sbjct: 66 tctag 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatat 53
|||| |||||| |||||||||||||||| ||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggaggga 152
|||| ||| |||||||| |||||||||||| ||||| |||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacat 137
|||| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 138 tgtaaaacggagggagta 155
| | ||||||||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| |||| ||| |||||||||||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatga 68
Query: 66 atctaga 72
|||||||
Sbjct: 69 atctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||||||||| |||||||||||||||| | ||| ||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 13 tttcataatataagtcattctaacatttttcatattcatatt 54
||||||||| |||||||||||| ||||| ||| |||||||||
Sbjct: 119 tttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
||||| || ||| |||||||||||||||| |||| | ||||||||||||||| |||| ||
Sbjct: 114 attcacatagatgttaatgaatctagatatatatgtgtgtctagattcattaacatctat 55
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| |||||||| ||| ||| | | |||||||||| ||||||||||||||
Sbjct: 54 atgaatgtgagcaatgctaggaagtcttacattgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||||| | | |||||| ||||||||||||| |||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatatatatctagattcattaacatctat 108
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
| |||||| | ||| ||| || | |||||||||| ||||||||||||||
Sbjct: 109 gtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/150 (82%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||| | ||||| |||| || |||||||| ||| |||||||
Sbjct: 154 tcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||| | ||||||||||||||| |||| |||| |||||||| ||| ||
Sbjct: 94 atctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgctaa 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 34 aaagtcttacattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | || || |||| ||| |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | | |||||| ||||||||||||| |||| |||| |||||| | ||| ||||
Sbjct: 70 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 129
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||| | ||||||||| ||||
Sbjct: 130 aagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 82 atgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgta 141
|||||||||||||||||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 142 aaacggagggagta 155
|||||||||||||
Sbjct: 18 gaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 23 taagtcattctaacatttttcatattcatattgatattaatgaatctaga 72
||||||||| || ||||| |||||| |||||||| |||||||||||||
Sbjct: 26 taagtcattatagcatttcccatatttatattgatgctaatgaatctaga 75
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/150 (82%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||| | ||||| |||| || |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||| | ||||||||||||||| |||| |||| |||||||| ||| ||
Sbjct: 69 atctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaa 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 129 aaagtcttacattatgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | || || |||| ||| |||||||| ||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | | |||||| ||||||||||||| |||| |||| |||||| | ||| ||||
Sbjct: 93 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||| | ||||||||| ||||
Sbjct: 33 aagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| ||||| ||| |||||||||||| |||||||
Sbjct: 123 tcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatga 64
Query: 66 atctagatag 75
||||||||||
Sbjct: 63 atctagatag 54
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| |||||||||||| |||||||||||| ||||| |||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 117 cggaggaagta 127
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
||||||||||||||| ||||||||| ||| || ||||| |||||||||||||||||| |
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 127 aacggagggagta 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 75
Query: 67 tctaga 72
||||||
Sbjct: 74 tctaga 69
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgactta 134
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 77.8 bits (39), Expect = 4e-14
Identities = 98/120 (81%), Gaps = 12/120 (10%)
Strand = Plus / Minus
Query: 19 aatataagtcattctaacatttttcatattcatattgatattaatgaatctagatagata 78
|||||||||||||||| ||||| ||| |||||||||||| ||||||||||||| | |||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacatata 49
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
| |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 48 t------------tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/150 (81%), Gaps = 12/150 (8%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| ||| || |||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 142 tcctccgttccacaatataagtcattctagcatttactatattcatattgatgttaatga 83
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||| |||||||||||| ||||||||| |||||| ||||| ||
Sbjct: 82 atctagat------------ctagattcattaacatcaatatgaatgtgggaaatggtaa 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| ||||||||| || ||||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 69
Query: 67 tctagat 73
|||||||
Sbjct: 70 tctagat 76
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 43 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 102
||||||||||| ||| ||||||||| |||| | |||||||||||||||||||| ||||
Sbjct: 46 catattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatc 105
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||||| | ||| ||||| | |||||||||| ||||||||||||||
Sbjct: 106 tatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||||| | |||| |||||| |||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctat 55
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| ||| || | | | ||||| | |||||||||| ||||||||||||||
Sbjct: 54 atgaatatgggcagtactagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/150 (81%), Gaps = 12/150 (8%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| ||| || |||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 9 tcctccgttccacaatataagtcattctagcatttactatattcatattgatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||| |||||||||||| ||||||||| |||||| ||||| ||
Sbjct: 69 atctagat------------ctagattcattaacatcaatatgaatgtgggaaatggtaa 116
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||| | ||||||||||||||
Sbjct: 117 aatgacttacattatgaaacggagggagta 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| ||||||||| || ||||| || |||||||||||| ||||||||
Sbjct: 141 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 82
Query: 67 tctagat 73
|||||||
Sbjct: 81 tctagat 75
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
||||||||||||||| ||||||||| ||| || ||||| |||||||||||||||||| |
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 67 tctaga 72
||||||
Sbjct: 70 tctaga 75
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 111 tcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatga 52
Query: 66 atctagata 74
|||||||||
Sbjct: 51 atctagata 43
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
|||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 140 taaaacggagggagta 155
| ||||||||| ||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||||||||||||||||||||| ||||| |||| |||||||||||| ||| |||||||
Sbjct: 9 tcctctgtttcataatataagtctttctagcattgctcatattcatatagatgttaatga 68
Query: 66 atctagat 73
||||||||
Sbjct: 69 atctagat 76
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| ||||||||||||||| | ||||| |||| ||||||||||| ||| |||||||
Sbjct: 135 cctccgtttcataatataagactttctagcattacccatattcatatagatgctaatgaa 76
Query: 67 tctagat 73
|||||||
Sbjct: 75 tctagat 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
|||||||||||||||||| |||| ||| || | ||| ||||| | |||| ||| | |||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 88 agattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgg 147
|||||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 148 agggagta 155
||| ||||
Sbjct: 128 aggaagta 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 92 tcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggaggg 151
|||||||||||||||| |||||||||||| ||||||||||||||| || |||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 152 agta 155
||||
Sbjct: 8 agta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| ||||| ||| |||||||||||| ||||||
Sbjct: 131 tcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatga 72
Query: 66 atct 69
||||
Sbjct: 71 atct 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||||||||| || |||||||||||| ||||| ||| ||||||||||||
Sbjct: 10 cctctgtttcacgatgtaagtcattctagcatttctcacattcatattgat 60
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 84 gtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaa 143
|||||||||||||||||||||||| ||| || ||||| |||||||||||||||| | ||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 144 acggagggagta 155
||||||||||||
Sbjct: 125 acggagggagta 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 131 cctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaa 72
Query: 67 tctaga 72
||||||
Sbjct: 71 tctaga 66
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 96 tagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||||| ||| |||||||| |||||| ||||||||||| ||||||||| ||||
Sbjct: 64 tagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||| |||||| ||| ||||| |||||| |||| ||||||||||||||||
Sbjct: 9 tcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgat 60
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 136 tcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatga 77
Query: 66 atctagat 73
||||||||
Sbjct: 76 atctagat 69
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| ||| || ||||| |||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 67 tctagat 73
|||||||
Sbjct: 70 tctagat 76
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| ||| || ||||| |||||||||||||||| | |||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 130 cggaggaagta 140
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
|||||| ||||||||||| ||||||||| |||||| ||||| |||||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 140 taaaacggagggagta 155
| ||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 76
Query: 67 tcta 70
||||
Sbjct: 75 tcta 72
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 94 attagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggag 153
|||| ||| ||||| |||||| ||||| |||||||||||||||||| ||||||||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 154 ta 155
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgga 148
||||||||| ||||||||| |||||||||||| |||||||| ||||||||| |||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 149 gggagta 155
|||||||
Sbjct: 135 gggagta 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgga 148
||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 149 gggagta 155
|| ||||
Sbjct: 11 ggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Query: 66 atc 68
|||
Sbjct: 69 atc 71
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||| |||||||| ||||| ||| |||||||||||| ||||||||
Sbjct: 136 cctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaa 77
Query: 67 tc 68
||
Sbjct: 76 tc 75
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||||||| ||||| |||||| ||||| |||||||||||| ||||| |||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 122 cggagggagta 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||||| || ||||||||| || |||||||
Sbjct: 127 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaa 68
Query: 67 tctagata 74
||||||||
Sbjct: 67 tctagata 60
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatat 59
||||| |||||| ||| |||||||||||| ||||| || ||||||||||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 62
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||||||| ||||| |||||| ||||| |||||||||||| ||||| |||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||||| || ||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaa 69
Query: 67 tctagata 74
||||||||
Sbjct: 70 tctagata 77
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatat 59
||||| |||||| ||| |||||||||||| ||||| || ||||||||||||||
Sbjct: 128 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 75
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 85.7 bits (43), Expect = 2e-16
Identities = 122/149 (81%), Gaps = 7/149 (4%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| |||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||| || || || || ||||||| |||||||||||||||| ||||| ||||
Sbjct: 70 actacatctattta-------agtttcattaacatcaatataaatgtgggaaatactaga 122
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||| ||||
Sbjct: 123 atgacttacattgtgaaacggaggaagta 151
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 91 ttcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagg 150
||||||| ||||||||| |||||| ||||| |||||||||||| ||||| |||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 151 gagta 155
|||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| |||||| |||| |||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 67 tctaga 72
||||||
Sbjct: 70 tctaga 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 107 taaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| ||||| |||||||||||| |||| | ||||||||| ||||
Sbjct: 86 taaatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacattt 40
||||| |||||||||| |||||||||||||||||
Sbjct: 130 tcctccgtttcataatggaagtcattctaacattt 96
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 77 tatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttaca 136
||||||||||||||||||||| || ||||| |||||| ||||| ||||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 137 ttgtaaaacggagggagta 155
|||| ||||||||| ||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || ||||||||| ||||||||||
Sbjct: 131 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatga 72
Query: 66 atctaga 72
|||||||
Sbjct: 71 atctaga 65
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||| ||||| |||||||||||||||||| ||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 86 ctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaac 145
|||||||||||||||||||||| |||||| ||||| || ||||||||||||||| ||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 146 ggagggagta 155
||||| ||||
Sbjct: 14 ggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 93 cattagcatcaatataaatgtgagaaattttaga-atgacttacattgtaaaacggaggg 151
||||||||||||||| |||||| ||||| || | |||||||||||||| ||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 152 agta 155
||||
Sbjct: 140 agta 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| || |||||||||||| ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatga 68
Query: 66 atctag 71
||||||
Sbjct: 69 atctag 74
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacat 137
|||||| ||||||||||||| ||||||||| |||||| |||| ||||| ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 138 tgtaaaacggagggagta 155
|| ||||||||||||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 23 taagtcattctaacatttttcatattcatattgatattaatgaatctagatagatat 79
||||||| ||||||||||| || |||||||||||| |||||||||||||||| ||||
Sbjct: 109 taagtcactctaacattttccacattcatattgatgttaatgaatctagatatatat 53
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 82 atgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgta 141
||||||||||||||||||||| |||| |||||| | ||| |||||| | ||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 142 aaacggagggagta 155
||||||||||||||
Sbjct: 145 aaacggagggagta 158
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 86 ctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaac 145
|||||||||||||||||||||| |||||| ||||| || ||||||||||||||| ||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 146 ggagggagta 155
||||| ||||
Sbjct: 134 ggaggaagta 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 93 cattagcatcaatataaatgtgagaaattttaga-atgacttacattgtaaaacggaggg 151
||||||||||||||| |||||| ||||| || | |||||||||||||| ||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 152 agta 155
||||
Sbjct: 8 agta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| || |||||||||||| ||||||
Sbjct: 139 tcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatga 80
Query: 66 atctag 71
||||||
Sbjct: 79 atctag 74
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacat 137
||||||||||||||||||||| | ||||| |||||| ||||| |||||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 138 tgtaaaacggagggagta 155
||| ||||||||| ||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||||||||||| |||||| ||||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || ||||||||| || ||||||
Sbjct: 126 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatga 67
Query: 66 atctaga 72
|||||||
Sbjct: 66 atctaga 60
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
|||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||| ||||| |||||||||||||||| | ||||||||||||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| | |||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatga 68
Query: 66 atctaga 72
|||||||
Sbjct: 69 atctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||||||| |||||||||||| ||||| || ||||||||||||
Sbjct: 130 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 80
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 43 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 102
||||||||||| ||| ||||||||| |||| | |||||||||||||||||||| ||||
Sbjct: 46 catattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatc 105
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| ||| || | ||| ||||| | |||||||||| ||||||||||||||
Sbjct: 106 tatatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 43 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 102
||||||||||| ||| |||||||||||||| | |||| |||||| |||||||| ||||
Sbjct: 117 catattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatc 58
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| ||| || | | | ||||| | ||||||| || ||||||||||||||
Sbjct: 57 tatatgaatatgggcagtactagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| |||| |||| |||||| ||||| |||||||||||||||||| |||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaa 69
Query: 67 tcta 70
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||| |||| | |||||||||||||||| ||||| ||| ||| ||||||||
Sbjct: 89 tcctccgttttacaatataagtcattctagcatttctcacatttatattgat 38
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||||||||||||| ||||||||| |||||||||||| ||| ||||||||
Sbjct: 138 cctctgtttcataatgtaagtcattttaacatttttcacatttatattgat 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||||||||| |||| ||| ||||||||||||| | |||| |||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| ||| |||||||||||| |||| ||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttctcacattcatattgat 60
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| ||||||||| |||||| ||||| |||||||||||||||||| ||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 147 gagggagta 155
|||||||||
Sbjct: 122 gagggagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
||||||||||| ||| |||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 125 cctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 66
Query: 67 tcta 70
||||
Sbjct: 65 tcta 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaat 63
|||||||||||| ||||||||||||| || |||||| || |||||||||||| |||||
Sbjct: 5 tcctctgtttcacaatataagtcattatagcattttccacattcatattgatgttaat 62
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
|||||||||||||||| || |||| ||| |||||| |||| |||||||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 139 gtaaaacggagggagta 155
||||||||||||||||
Sbjct: 122 ataaaacggagggagta 138
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||| |||||||||||| ||||||||||||||||| | ||||||||||||||
Sbjct: 61 catccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatat 53
|||| |||||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||| ||||| ||||||||||||||||||| || |||| ||| ||| ||| ||||
Sbjct: 133 cctccgttttataatgtaagtcattctaacattttccacattcgtatggatgttagtgaa 74
Query: 67 tctaga 72
||||||
Sbjct: 73 tctaga 68
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
|||||| ||||||||||| ||||||||| |||||| |||| |||||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 140 taaaacggagggagta 155
| ||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| |||||| || |||||||||||| ||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaa 76
Query: 67 tcta 70
||||
Sbjct: 75 tcta 72
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 94 attagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggag 153
|||| ||| ||||| |||||| ||||| |||||||||||||||||| ||||||||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 154 ta 155
||
Sbjct: 6 ta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaat 63
||||| |||||| ||| |||||||||||| ||||| || ||||||||| || |||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 88 agattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgg 147
|||||||||| ||||||||| |||||| ||||| |||||||||||||||||| ||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 148 agggagta 155
||| ||||
Sbjct: 12 aggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 94 attagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggag 153
|||| ||||||||| |||||| ||||| ||||||||||||| |||| ||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 154 ta 155
||
Sbjct: 136 ta 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatga 68
Query: 66 atct 69
||||
Sbjct: 69 atct 72
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||||||| | ||||||||| |||||||
Sbjct: 126 tcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatga 67
Query: 66 atctagatagatatatatgt 85
||||||||||||||| ||||
Sbjct: 66 atctagatagatataaatgt 47
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||| ||||| || ||||||||||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| | |||| |||| || ||||||||||||||| |||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 120 cggaggaagta 130
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 79.8 bits (40), Expect = 1e-14
Identities = 120/149 (80%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || |||||||||||| |||||| |
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgta 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||||| ||||| ||||| ||||||||| |||||| ||||| ||||
Sbjct: 70 tctagata------------tagatacattaacatcaatatgaatgtgggaaatgctaga 117
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| |||||||| ||||
Sbjct: 118 atgacttacattgtggaacggaggaagta 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||| |||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatatt 60
||||| |||||| |||||||||||||||| ||||| || |||||||||||||||
Sbjct: 132 tcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| ||||| || ||| |||||||||||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaa 69
Query: 67 tctagatagatat 79
| |||||| ||||
Sbjct: 70 tttagataaatat 82
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| |||||||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 67 tcta 70
||||
Sbjct: 70 tcta 73
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| |||||||| || |||||||| |||||||||||| ||||| |||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 147 gaggga 152
||||||
Sbjct: 13 gaggga 8
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||| |||||| ||||||||||||| || ||||||||| |||||| |||||
Sbjct: 133 tcctccgtttcacaatataagtcattttagcatttttcacattcatgttgat 82
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaa 69
Query: 67 tctagata 74
||||||||
Sbjct: 70 tctagata 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| ||| | |||| |||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 94 attagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggag 153
|||| ||||||||| ||||| ||||| |||||||||||| ||||| ||||||||| ||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 154 ta 155
||
Sbjct: 137 ta 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaat 63
||||| |||||| |||||||||||||||| |||| | |||||||||||| |||||
Sbjct: 134 tcctccgtttcacaatataagtcattctactatttcctacattcatattgatgttaat 77
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||||||||| ||||| ||||| |||||||||||||||| | |||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 145 cggagggagta 155
|||||||||||
Sbjct: 113 cggagggagta 123
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||||||||||| ||||| | |||||||||||| ||||||||
Sbjct: 118 cctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaa 59
Query: 67 tctagata 74
||||||||
Sbjct: 58 tctagata 51
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatatt 48
||||| |||||| ||| |||||||||||| |||||| ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcattttccatatt 51
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
||||||||||||||||||||||||||||| ||| ||| |||| || |||| |||||||||
Sbjct: 15 gtttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||| |||||||||| || || ||||||||||||||||| ||||||||||||| |||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatatt 22
Query: 139 gtaaaacggagggagta 155
| ||||| ||| ||||
Sbjct: 21 atgaaacgaaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||||| ||||| |||||||||||||||| | ||||||||||||||
Sbjct: 77 atatagatgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacattt 40
|||| |||||||||| |||||||||||| |||||
Sbjct: 123 cctccgtttcataatgtaagtcattctagcattt 90
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| |||||||||| | |||| |||| |||||||||||||||||| |||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||||||| | |||||||| |||||||
Sbjct: 126 tcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatga 67
Query: 66 atctagatagatat 79
||||||||||||||
Sbjct: 66 atctagatagatat 53
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 28 cattctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtct 87
||||||||||||| || |||||||| | | |||||||||||||||| ||||| ||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 88 agattcattagcatcaatataaatgtg 114
|||||||||| || | |||| ||||||
Sbjct: 42 agattcattaacacctatatgaatgtg 16
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 28 cattctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtct 87
||||||| |||||| || |||||||| | | |||||||||||||| | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 88 agattcattagcatcaatataaatgtgagaaattttagaatg 129
|||||||||| || | |||| |||||| ||||| ||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 93 cattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggaggga 152
||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 153 gta 155
|||
Sbjct: 7 gta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatg 64
||||| |||||| ||| |||||||||||| ||||| ||| ||| ||||| || ||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||| ||||| |||||| |||||||||||| || |||||||
Sbjct: 130 tcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatga 71
Query: 66 atctagatagatatatatg 84
|||||||| |||||||||
Sbjct: 70 atctagatgaatatatatg 52
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatat 53
|||| |||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| ||| ||||| ||| || |||| ||||| |||||||||||| |||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 145 cggagggagta 155
|||||| ||||
Sbjct: 124 cggaggaagta 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||| | ||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 122/150 (81%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
|||||||||||||||| |||| | ||||| | || || ||| |||| |||| ||||||
Sbjct: 9 tcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatactaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||| | || |||||||||||||||| |||| |||||| | ||| |||
Sbjct: 69 atctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 129 aaagtcttacattatgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | ||||| |||| || |||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtg 114
||||| | | ||||||||||||||||||||| ||| |||||||||||
Sbjct: 93 tctaggcacacatatatgtctagattcattagtatctatataaatgtg 46
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| |||||| ||||||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatga 68
Query: 66 at 67
||
Sbjct: 69 at 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgat 57
|||||||||| |||||||||||| |||||| |||||||||||||||
Sbjct: 119 gtttcataatgtaagtcattctagcattttccatattcatattgat 74
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||||| ||||||||| ||| || |||| |||||||||||||||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ggagta 155
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||| ||| ||||| |||||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctatatacttatatgtgtctagattcattagcatctat 55
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
| |||||| | ||| ||||| | |||||||| | ||||||||| ||||
Sbjct: 54 gtgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 120/150 (80%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||| | ||||| |||| || ||||| || ||| ||||||
Sbjct: 9 tcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | ||||| | | ||||||||||| |||| |||| |||| | | ||| |||
Sbjct: 69 atctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||||| ||||||||||||||
Sbjct: 129 aaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||||| || |||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ggagta 155
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| ||| |||||||||| | |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatga 68
Query: 66 at 67
||
Sbjct: 69 at 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 98 tagaatgacttacattgtgaaacggagggagta 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatat 53
|||| |||||| ||| |||||||||||| |||||| |||||||||||
Sbjct: 125 cctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||||| |||||||||||| |||| |||| |||||||||||||||||| ||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 150 ggagta 155
| ||||
Sbjct: 126 gaagta 131
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||||||| || |||||||| |||||||
Sbjct: 127 tcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatga 68
Query: 66 at 67
||
Sbjct: 67 at 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 59 ttaatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaa 118
|||||||||||| | | ||| ||||||||||||||||||||||| | || ||| || | |
Sbjct: 62 ttaatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggca 121
Query: 119 attttagaatgacttacattgtaaaacggagggagta 155
|| ||||| | |||||||||| ||||||||||||||
Sbjct: 122 atgctagaaagtcttacattgtgaaacggagggagta 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 60 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaa 119
||||||||||||| | || ||| ||| ||||||||||| ||| |||| ||||| | ||
Sbjct: 100 taatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaa 41
Query: 120 ttttagaatgacttacattgtaaaacggagggagta 155
| ||||| | |||||||||| ||||||||| ||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||
Sbjct: 61 catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaa 62
||||| |||||| ||||||||||||| || ||||| ||||||| |||||||| ||||
Sbjct: 118 tcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||||| |||||||| || ||||||||| ||||| ||||||||| ||||
Sbjct: 66 catcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| ||||||||||| |||| |||| |||||| ||||||||||| |||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 147 gagggagta 155
|||||||||
Sbjct: 13 gagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||| |||||| |||||| || | | |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaa 69
Query: 67 tctagatagatata 80
|||| |||||||||
Sbjct: 70 tctatatagatata 83
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 127 atgacttacattgtaaaacggagggagta 155
|||||||||||||| ||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||| | ||||| |||| | ||||| ||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaa 94
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| ||| ||| | |||||||||||||||| || | | || |||||| | ||| ||||
Sbjct: 93 tctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||||| ||||||||| ||||
Sbjct: 33 aagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
|||||| |||| ||||||||||| |||| |||| |||||||||||||||||| |||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 147 gagggagta 155
|||||||||
Sbjct: 131 gagggagta 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||| ||||| |||| || ||||||||||||||| ||| ||||||||||
Sbjct: 60 atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaatggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || | | |||||||| ||||| ||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaa 75
Query: 67 tctagatagata 78
|||| |||||||
Sbjct: 74 tctatatagata 63
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
|||||||||| || | ||||||||| |||||| ||||| |||||||||||||||||| |
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 132 aacggaggaagta 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||| | ||||||||| |||||| ||||| ||||||| |||||||||| ||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 150 ggagta 155
||||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||||||| || || |
Sbjct: 140 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataa 81
Query: 66 atctaga 72
|||||||
Sbjct: 80 atctaga 74
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 91 ttcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagg 150
||||||| ||||| |||||||||| ||||| |||||||||||| ||||| |||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 151 gagta 155
|||||
Sbjct: 117 gagta 121
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||| ||||| || ||||||||||||||| ||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||| |||||| ||| |||||||||||| ||||| ||| ||||||||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||| ||||||||||||| ||||||||||||||
Sbjct: 79 tagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||||| | ||||||||||||||||||||| |||| ||
Sbjct: 25 attcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctat 84
Query: 106 ataaatgtg 114
|| ||||||
Sbjct: 85 atgaatgtg 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| | |||||||||||| | |||||| ||||||||||||||| |||| ||
Sbjct: 90 attcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctat 31
Query: 106 ataaatgtg 114
|| ||||||
Sbjct: 30 atgaatgtg 22
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttaga-atgacttacattgtaaa 143
||||||||||||| ||||||||| |||||| ||||| ||||| |||||||||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 144 acggagggagta 155
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 31 tctaacatttttcatattcatattgatattaatgaatctagatagatat 79
|||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatat 59
||||| |||||| ||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 133 tcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 80
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| ||| || ||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||| ||||||||||||| || ||||||||||||| | ||| || |||||||||||||
Sbjct: 15 gtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctag 74
Query: 72 atagatat 79
| ||||||
Sbjct: 75 acagatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatat 53
|||| |||||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacat 137
|||| ||||||||||||||| ||| ||| ||||| ||| |||| || ||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 138 tgtaaaacgga 148
||| |||||||
Sbjct: 22 tgtgaaacgga 12
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||||||||||||||||||| |||| |||| |||||| | ||| |||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 136 attgtaaaacggagggagta 155
||| | ||| ||||| ||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 13 tttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctaga 72
||||||||| |||||||||||| |||| || |||||||| ||| ||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 73 tagatatat 81
| ||||||
Sbjct: 61 catatatat 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||| | ||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||| |||||| | ||||| |||| || | |||||| ||| ||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacaatcatatagatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtg 114
||| | | ||||||||||||||||||||||||||| |||| ||||||
Sbjct: 70 cctatacacatatatatgtctagattcattagcatctatatgaatgtg 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||| |||||| | ||||| |||| || |||||||| ||| ||||||
Sbjct: 154 tcctccgtttcatattataagactttctagcattgcccacattcatatagatgctaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatat 107
||||||| | |||||| ||| ||| ||||||| |||| ||||
Sbjct: 94 atctagacatatatatgtgtataggttcattaacatctatat 53
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 60 atcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||||||||||| |||||| || ||| |||||||||||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacatttatattgatattaataaa 69
Query: 67 tctagatagatat 79
| |||||| ||||
Sbjct: 70 tttagataaatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatatt 60
||||| |||||| |||||||||||||||| ||||| || |||||||||||||||
Sbjct: 132 tcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||||||||||||| || |||||| | ||||||||||||| ||||||
Sbjct: 128 tcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatga 69
Query: 66 atctagatagatatat 81
||||||| | ||||||
Sbjct: 68 atctagacatatatat 53
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||||||||||||||||||| ||||||||| ||| | |||| || |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 136 attgtaaaacggagg 150
||||| |||||||||
Sbjct: 113 attgtgaaacggagg 127
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||||| |||||||| |||| ||||| ||| |||||| ||||| |||||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 136 attgtaaaacggagggagta 155
||| | |||| |||||||||
Sbjct: 125 attatgaaacagagggagta 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
||||||||||||||| |||||||||||| |||| || ||||||| |||| ||||| ||
Sbjct: 139 cctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaa 80
Query: 67 tctagatagatatat 81
|||||||| ||||||
Sbjct: 79 tctagatatatatat 65
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 94 attagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggag 153
|||| ||||| ||| ||||||| |||| |||||||||||||||| | ||||||||| ||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 154 ta 155
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 47 ttcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaata 106
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaata 72
Query: 107 taaatgtgagaaat 120
| || ||| |||||
Sbjct: 73 tgaacgtgggaaat 86
Score = 63.9 bits (32), Expect = 6e-10
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 47 ttcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaata 106
||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||
Sbjct: 76 ttcatattgatattaatgaatctagat---tatatctatctagattcattaatatcaata 20
Query: 107 taaatgtgagaaat 120
| || ||| |||||
Sbjct: 19 tgaacgtgggaaat 6
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 131 tcctccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatga 72
Query: 66 atct 69
||||
Sbjct: 71 atct 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
|||| |||||| |||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcacacattcacattgatattaatga 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||| | |||||| ||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 60 atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 88 agattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgg 147
|||||||||| |||||| | |||||| ||||| |||||||||||| ||||| ||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 148 agggagta 155
||| ||||
Sbjct: 128 aggaagta 135
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 105 tataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 99 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 104 atataaatgtgagaaattttagaatgacttacattgtaaaacgg 147
||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
|||||||||||||| |||||||||||| ||| |||| || ||||| ||||||||| |||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 145 cggagggagta 155
||||||||||
Sbjct: 96 tggagggagta 106
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 13 tttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctaga 72
||||| ||| ||| ||||| || ||||||||||||| ||||||||| |||||||||||||
Sbjct: 95 tttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaatctaga 36
Query: 73 ta 74
||
Sbjct: 35 ta 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 101 tcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 97 agcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||| || ||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 63 agcatcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||| ||||||||||||||||||||||||
Sbjct: 75 tagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 49 catattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatata 108
||||| ||| |||||||||||| ||| ||| |||||||||||||||||| |||| | ||
Sbjct: 111 catatggatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatg 52
Query: 109 aatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||| || | ||| ||||| | |||||||||| ||||||||| ||||
Sbjct: 51 aatatgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 120/150 (80%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||| | ||||| |||| ||||||||| | ||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | || ||| | | ||||||||||| |||| |||| | ||| | ||| |||
Sbjct: 69 atctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatactag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||||| ||||||||||||||
Sbjct: 129 aaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacgga 148
||||||||| ||||||||| |||||| ||||| || ||||||||||||||| |||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 149 gggagta 155
|| ||||
Sbjct: 128 ggaagta 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||| || ||||| || |||||||||||| |||||||
Sbjct: 130 tcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatga 71
Query: 66 atctagata 74
||| |||||
Sbjct: 70 atcaagata 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||| ||||||
Sbjct: 34 aatgacttacattgtgaaacggatggagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | || || |||| | |||||||| | ||| ||||||||
Sbjct: 151 cctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgttaatgaa 92
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||||| | ||| | ||||||||||||||| |||| |||| |||||| | ||| ||||
Sbjct: 91 tctagaca--tatgtgtgtctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 127 atgacttacattgtaaaacggagggagta 155
| |||||||||| | ||||||||| ||||
Sbjct: 33 aagacttacattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 121/150 (80%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||| ||||| |||| || |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||| | | | |||||||||||||||||| |||| | || ||| | || ||| ||
Sbjct: 69 atctag--acacacatatgtctagattcattaacatctagatgaatataagcaatgctac 126
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 127 aaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
|||||||||||||| ||||||||||||||||| |||||| ||||| ||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||||||||||||| |||||||||||||| |||||| ||||| ||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatgttag 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 32 ctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtctagat 91
||||||||| || |||||||||||| |||| |||||||| | ||||||||||||| |
Sbjct: 116 ctaacatttcccacattcatattgatgctaataaatctagaca--tatatatgtctagtt 59
Query: 92 tcattagcat 101
| ||||||||
Sbjct: 58 ttattagcat 49
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||||| ||||||||| ||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 150 ggagta 155
| ||||
Sbjct: 109 gaagta 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 109 aatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 51 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| | |||||||||||| |||||||
Sbjct: 110 tcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatga 51
Query: 66 at 67
||
Sbjct: 50 at 49
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 24 aagtcattctaacatttttcatattcatattgatattaatgaatctagatagatatat 81
||||||||||| ||||| || |||||||||||| |||||| ||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 73 tagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgact 132
||||||||| | ||||||| ||||| ||||||||| |||||| ||||| ||||||||||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Query: 133 t 133
|
Sbjct: 123 t 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 24 aagtcattctaacatttttcatattcatattgatattaatgaatctagat 73
||||||||||| ||||| || |||||||||||| |||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgactt 133
||||||| ||||| ||||||||| |||||| ||||| |||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/150 (80%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||| | ||||| |||| | | |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaatga 68
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | |||| | ||| ||||||||||| |||| |||| |||||| || |||
Sbjct: 69 atctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacctag 128
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 129 aaagtcttacattatgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| |||||||||||| | | | |||||||||||||||||||| |||| ||
Sbjct: 114 attcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctat 55
Query: 106 ataaatgt 113
|| |||||
Sbjct: 54 atgaatgt 47
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaa 69
Query: 67 tctaga 72
||||||
Sbjct: 70 tctaga 75
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacat 137
||||| |||||||||||||| ||| |||| || || | ||| ||||||||||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 138 tgtaaaacggagggagta 155
| | ||||||||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatt 39
||||| |||||||||| |||||||||||| ||||
Sbjct: 132 tcctccgtttcataatgtaagtcattctagcatt 99
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 82 atgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgta 141
|||| ||||||||||| ||||||||| |||||| || || |||||||||||| |||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 142 aaacggagggagta 155
||||||||| ||||
Sbjct: 119 aaacggaggaagta 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| |||||||||||||||| ||| | || |||||||||||| |||||||
Sbjct: 128 tcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatga 69
Query: 66 atcta 70
|||||
Sbjct: 68 atcta 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| ||| |||||||||||| |||||| || ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||||||||||||||||| |||| |||| |||||| | ||| ||||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 139 gtaaaacggagggagta 155
| ||||||||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||||| ||||| |||| || |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatga 68
Query: 66 atctaga 72
|||||||
Sbjct: 69 atctaga 75
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||||
Sbjct: 61 catcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 13 tttcataatataagtcattctaacatttttcatattcatattga 56
||||||||| |||||||||||| |||||||| |||||||||||
Sbjct: 105 tttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 101 tcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||| ||||||| |||| |||||||||||||||| | ||| ||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| ||| ||||||||| || |||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagtatttttcacattcatattgat 60
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 43 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 102
||||||||| | ||| |||||||||||||| | || ||| ||| ||||||||||| | ||
Sbjct: 117 catattcatttagatgttaatgaatctagacatatgtatgtgtttagattcattaacgtc 58
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| || |||| ||| ||||| | |||||||||| ||||||||||||||
Sbjct: 57 tatatgtatatgagcaatgctagaaagtcttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| |||| | ||||| |||| |||||| ||||| || ||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
|||| | | ||| |||||||||||||||||| |||| | || ||| || | ||| || |
Sbjct: 70 tctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaaa 129
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||||| ||||||||| ||||
Sbjct: 130 aagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 91 ttcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagg 150
||||||| ||||||||| |||||| ||||| ||||||||||| |||||| |||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 151 gagta 155
||||
Sbjct: 9 aagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| ||||||||||| ||||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatga 68
Query: 66 a 66
|
Sbjct: 69 a 69
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 13 tttcataatataagtcattctaacatttttcatattcatattgat 57
|||||||||||||||||||||| |||||| |||||| ||||||||
Sbjct: 128 tttcataatataagtcattctagcattttccatatttatattgat 84
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||| | ||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 97 agcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||||||||| || |||| |||||||||||| ||| | ||| ||||||||||
Sbjct: 81 agcatcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| || |||||||||||||||| |||||| || |||||||||||| |||| ||
Sbjct: 25 attcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat 84
Query: 106 ataaatgtg 114
|| ||||||
Sbjct: 85 atgaatgtg 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| ||||||||||||| | |||||||| ||||||||||||| ||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatatat 31
Query: 106 ataaatgtg 114
|| ||||||
Sbjct: 30 atgaatgtg 22
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||||||||||||| || ||||| || |||||||||||| |||||||
Sbjct: 126 tcctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaatga 67
Query: 66 atcta 70
|||||
Sbjct: 66 atcta 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| ||||||||| |||||| |||| || ||||||||| ||||| |||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 147 gagggagta 155
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||| |||| |||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 61 catcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 92 tcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggaggg 151
|||||| |||| |||| |||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 152 agta 155
||||
Sbjct: 127 agta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| || |||||||| ||| |||||||
Sbjct: 126 tcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
||||||||||||||||||||||||||| |||| |||||| | ||| ||||| | ||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 136 attgtaaaacggagggagta 155
| | | ||||||||||||||
Sbjct: 119 aatatgaaacggagggagta 138
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||| |||| ||||||||||| |||||| ||||||||| ||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaat 63
||||| |||||| ||| ||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 104 tcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||| ||| ||||||||||| |||| ||||| ||||| | ||| |||||| | ||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttat 114
Query: 136 attgtaaaacggagggagta 155
||||||||||||||| ||||
Sbjct: 115 attgtaaaacggaggtagta 134
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 92 tcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggaggg 151
|||||| ||||||||| |||||| |||| || ||||||||||||||| ||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 152 agta 155
||||
Sbjct: 8 agta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
|||| |||||| ||| ||||||||| || |||||| || |||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||| |||||| ||| |||||||||||| |||||| |||||||||||||||
Sbjct: 127 tcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 76
Score = 60.0 bits (30), Expect = 9e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 82 atgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgta 141
|||| ||||||||| | ||||||||| |||||| |||| |||||| |||||||||||
Sbjct: 77 atgtttagattcataa-catcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 142 aaacggagggagta 155
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 99 tagaatgacttacattgtgaaacggaggaagta 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||| ||| ||||| |||||| |||||| || |||||||||||| || |||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaa 68
Query: 67 tcta 70
||||
Sbjct: 69 tcta 72
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| |||||||||||||||| ||||| || ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 101 tcaatataaatgtgagaaattttagaatgacttacattgt-aaaacggagggagta 155
||||||| |||||| ||||| |||||||||||| ||||| |||||||||| ||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 13 tttcataatataagtcattctaacatttttcatattcatattga 56
||||| |||||||||||||||| ||||| || |||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 60 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaa 119
|||||||||||| | | ||||||||||||||||||| ||||| |||| |||||| | ||
Sbjct: 42 taatgaatctaggcacacatatatgtctagattcatttgcatctatatgaatgtgggcaa 101
Query: 120 ttttagaatgacttacatt 138
| |||||| | ||||||||
Sbjct: 102 tgttagaaagtcttacatt 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 61 aatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtg 114
|||||||||||| | |||| | || |||||||||||||||| |||| ||||||
Sbjct: 78 aatgaatctagacatatatgtgtgcctagattcattagcatagatatgaatgtg 25
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 109 aatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 51 aatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgt 140
|||||||||||||||||| |||||| ||||| || |||||||| ||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgt 99
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 77 tatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttaca 136
|||| ||||||||||| |||| ||||||||| ||| || ||||| || |||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 137 ttgtaaaacggagggagta 155
|||| ||||||||| ||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||| || ||||| ||||||||||||||| ||||| |
Sbjct: 132 tcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataa 73
Query: 66 atctaga 72
|||||||
Sbjct: 72 atctaga 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 109 aatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||| ||||| |||||| ||||||||||| ||||||||| ||||
Sbjct: 51 aatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 110 atgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||| ||||||||| ||||||||||||||
Sbjct: 63 tagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||| | ||||| |||| ||| || ||||| ||| |||||||
Sbjct: 154 tcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaatga 95
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||| | | || ||||||||| |||||||| |||| | || ||||| | ||| |||
Sbjct: 94 atctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaatattaa 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||||||||||||||| ||||
Sbjct: 34 aaagtcttacattgtaaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||| | ||| ||||||||| |||| | || || ||| ||||||||||| |||| ||
Sbjct: 49 attcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatctat 108
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| ||||||| ||| ||||| | |||||||||| ||||||||| ||||
Sbjct: 109 atgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||||| |||||||| ||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 150 ggagta 155
| ||||
Sbjct: 121 gaagta 126
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| ||||| | ||||||||||||||||||||
Sbjct: 122 tcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatga 63
Query: 66 at 67
||
Sbjct: 62 at 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||| |||||| | ||||| ||| | ||| ||||||| ||| | ||||||
Sbjct: 153 cctccgtttcatattataagactttctagaattgtccatcttcatatagatgtcaatgaa 94
Query: 67 tctagatagatatatatgtctagattcatt 96
|||| | | |||||||||||||||||||||
Sbjct: 93 tctaaacacatatatatgtctagattcatt 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||| |||||| | |||||||||| || |||||||| || | |||||
Sbjct: 9 tcctccgtttcatattataagactttctaacattgcccacattcatatatatgtcaatga 68
Query: 66 atctagatagatatatatgtctagattcatt 96
||||||| | |||||| ||| ||||||||||
Sbjct: 69 atctagacatatatatgtgtttagattcatt 99
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
||||||||||||||| |||| | ||||| |||| | || |||||||| ||| ||||||||
Sbjct: 127 cctctgtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaa 68
Query: 67 tctaga 72
||||||
Sbjct: 67 tctaga 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
||||| |||||||||||||||| |||| |||| |||||| ||| ||||| | |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 136 attgtaaaacggagggagta 155
||| | |||| |||||||||
Sbjct: 113 attatgaaacagagggagta 132
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 90 attcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
|||||||| ||||||||| |||||| |||| |||||||||||||||||| ||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 150 ggagta 155
| ||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||| ||| |||||||||||| || |||||| || ||||||||| |||||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattctagca-ttttcacatccatattgatgttaatga 67
Query: 66 at 67
||
Sbjct: 68 at 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggaggg 151
|||||||||||||||||| ||||||||||
Sbjct: 80 tagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgat 57
|||||| |||||||||||||||| ||||| |||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccatattcatattgat 60
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||| ||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatatt 54
||||| |||||| |||||||||||||||| ||||| || |||||||||
Sbjct: 115 tcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacgga 148
||||||||| ||| || ||||| |||||||||||| ||||| |||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 55 gatattaatgaatctagatagatatatatgtctagattcattagcatcaatata 108
|||||||||||||||||||| || ||| | ||||||||||||| |||| |||||
Sbjct: 103 gatattaatgaatctagatatatgtatgtttctagattcattaacatctatata 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 50 atattgatattaatgaatctagatagatatatatgtctagattcattagcatcaatataa 109
|||| ||| |||||||||||||| | ||| |||| ||||||||||||| ||| | ||||
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 110 atgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||| || || | |||||||||| ||||||||| ||||
Sbjct: 111 atgtggacaatgctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||| | ||| |||||||||||| | | || |||||||||||||| |||| |||| |
Sbjct: 49 attcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatctaa 108
Query: 106 ataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|| ||||| | ||| ||||| | |||||||||| ||||||||||||||
Sbjct: 109 atgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||||||||||||| || ||| ||||||||||| ||||||||| ||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||| |||||| || ||| ||||||||||| ||||||||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 84 tagaatgacttacattgtgaaacggagggagta 116
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
||||||||||| |||||| ||||||||||||||
Sbjct: 37 tagaatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 4e-08
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 59 ttaatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaa 118
|||||||||||| | | ||| |||||| ||||||||||| |||| | || |||||| | |
Sbjct: 101 ttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggta 42
Query: 119 attttagaatgacttacattgtaaaacggagggagta 155
|| ||||| | |||||||||| |||| |||||||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||| ||| |||| |||||||| ||||||||| ||||||||||||||
Sbjct: 48 catcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| ||| ||| |||||||| ||||||||||||| |||||||
Sbjct: 99 cctccgtttcacaatgtaaatcattctagcatttttcatatttctattgat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 110 atgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||| |||| |||||||||||| ||||| ||||| ||||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacatt 138
||||||||||||||||||| || |||| ||| ||||||| |||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 139 gtaaaacggagggagta 155
|| ||||||||| ||||
Sbjct: 123 gtgaaacggaggaagta 139
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaacggagggagta 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 110 atgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| ||||| |||||||||||||||||| |||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatgactt 133
||||||||||||||||||| |||||| ||||| |||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 89 gattcattagcatcaatataaatgtgagaaattttagaatga 130
||||||||||||||||||| |||||| ||||| ||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| |||| |||||| ||||||||||| ||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| |||| |||||| ||||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgata 58
|||| |||||| ||| ||||| |||||| |||||| || |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgata 61
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 102
|||||| | ||| |||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 49 attcatttagatgttaatgaatctaaacacatatatatgtctagattcattaacatc 105
Score = 50.1 bits (25), Expect = 9e-06
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 59 ttaatgaatctagatagatatatatgtctagattcattagcatcaatataaatgtgagaa 118
|||||||||||||| | |||||| ||| ||||||||||| |||| | || |||||| | |
Sbjct: 101 ttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggta 42
Query: 119 attttagaatgacttacattgtaaaacggagggagta 155
|| ||||| | ||| |||| | ||||||||| ||||
Sbjct: 41 atgctagaaagtcttgcattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| ||||||||| || || ||| || |||||||||||| |||||||
Sbjct: 9 tcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgttaatga 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||| | |||||||||||||||||| |||| |||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
||||||||||| ||| |||||||||||| || || || ||||||||||||
Sbjct: 118 cctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| |||| |||||| ||||||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| |||| |||||| ||||||||||| ||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgata 58
|||| |||||| ||| ||||| |||||| |||||| || |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgata 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgata 58
|||| |||||| ||| ||||| |||||| |||||| || |||||||||||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcattttccacattcatattgata 69
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||||||||||||||||||| |||| | || |||||| ||| ||||| | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 136 attgtaaaacggagggagta 155
||||| ||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 112 gtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 99 catcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||| | |||||| ||||| |||||| ||||| ||||| ||||||||||||||
Sbjct: 61 catcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
||||||||||||| |||| |||| |||| |||||| | ||| ||||| | |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 140 taaaacggagggagta 155
| ||||||||| ||||
Sbjct: 119 tgaaacggaggaagta 134
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 43 catattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatc 102
||||||||||| || ||||||||||||| | | ||||||| |||||||||||| ||||
Sbjct: 22 catattcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatc 81
Query: 103 aatataaatgtg 114
|||| ||||||
Sbjct: 82 tatatgaatgtg 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcatta 97
|||||||| ||| ||||||||||||| | |||| |||| ||||||||||||
Sbjct: 90 attcatatagatgttaatgaatctaggcatatatgtatgcctagattcatta 39
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 100 atcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||||| |||||| ||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 101 tcaatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||||| |||||| ||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattga 56
||||| |||||| |||||||||||||||| ||||| || |||||||||||
Sbjct: 110 tcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgat 57
|||| |||||| |||||||||||||||| || ||| || ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgt 140
|||||||||||| |||| |||| |||| |||||| ||| |||||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 141 aaaacggagggagta 155
||||||||||||||
Sbjct: 123 gaaacggagggagta 137
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 120/150 (80%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||||| |||| | ||||| |||| | || |||||||| || |||||||
Sbjct: 152 tcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgttaatga 93
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | ||||| |||||||||||| ||||||||| ||| | | ||| |||
Sbjct: 92 atctagacacgcatata--cctagattcattaacatcaatatgaatataggcaatgctag 35
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||||||| | ||||||||||||||
Sbjct: 34 aaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 119/149 (79%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | ||||| |||| |||||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaa 69
Query: 67 tctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttaga 126
||||| | |||| ||||||||||||||| ||| |||| |||||| ||| ||||
Sbjct: 70 tctaggt--atatgcgtgtctagattcattaacatttatatgaatgtggacaatgctaga 127
Query: 127 atgacttacattgtaaaacggagggagta 155
| | |||||||| | ||||||||| ||||
Sbjct: 128 aagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 73 tagatatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgact 132
||||| ||||||| ||||||||||| |||| || || ||||| | ||| ||||| ||
Sbjct: 87 tagatgtatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatct 28
Query: 133 tacattgtaaaacggagggagta 155
|||||||| ||||||||||||||
Sbjct: 27 tacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttt 41
|||| ||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcatttt 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 105 tataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||| || |||||| |||||||||||||||| | ||||| ||||||||
Sbjct: 96 tataaaggtaagaaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 109 aatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
|||||| ||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 49 aatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| |||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacagagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacattt 40
||||||||||| ||| |||||||||||| |||||
Sbjct: 10 cctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
|||||||||||||| |||||| | ||||| |||| | || |||||||| || |||||||
Sbjct: 131 tcctctgtttcatattataagactttctagcattgtccacattcatatatatgttaatga 72
Query: 66 atctaga 72
|||||||
Sbjct: 71 atctaga 65
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 81 tatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgt 140
||||| || ||| |||| ||||||||| |||||| |||| || |||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 141 aaaacggagggagta 155
||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaat 63
||||| |||||| ||| ||||||||| || ||||| || |||||||||||| |||||
Sbjct: 9 tcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 126 aatgacttacattgtaaaacggagggagta 155
|||| |||||||||| ||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 76 tagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 126 aatgacttacattgtaaaacggagggagta 155
||||||||||||||| ||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 103 aatataaatgtgagaaattttagaatgacttacattgtaaaacggagggagta 155
||||| |||||| ||||| || ||||||||||||||| ||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
||||||||||||||| ||| |||||||| |||| || || ||||| ||| ||||||||
Sbjct: 127 cctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaa 68
Query: 67 tctaga 72
||||||
Sbjct: 67 tctaga 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 84 gtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaa 143
|||||||||||||| |||| |||| ||||| | ||| |||||||| ||||||| | ||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 144 acggagggagta 155
|| |||||||||
Sbjct: 121 acagagggagta 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatt 39
||||| |||||||||| |||||||||||| ||||
Sbjct: 9 tcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 73 tagatatatatgtctagattcattagcatcaatataaatgtg 114
||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtg 12
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 12 gtttcataatataagtcattctaacatttttcatattcatattgatattaatgaatctag 71
|||||||||| |||| | ||||| |||| | |||||| |||| ||| |||||||||||||
Sbjct: 127 gtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaatctag 68
Query: 72 a 72
|
Sbjct: 67 a 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattagcatcaatataaat 111
||||||||||||||||| |||| ||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaat 93
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
|||||| |||||||| |||| |||| |||||| | ||| ||||| | |||||||| | |
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 105 tataaatgtgagaaattttagaatgacttacattgtaaaacggag 149
||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 39 tataaatgtaggaaatgctagaatgacttacattgtgaaacggag 83
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
|||||||||| |||| |||| |||| |||||| ||| ||||| | |||||||||| |
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 143 aacggagggagta 155
|||||||||||||
Sbjct: 128 aacggagggagta 140
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 123 tagaatgacttacattgtaaaacggagggagta 155
|||||||||||||||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||||| |||||||||| | | |||| | ||||||||||||||| ||| ||
Sbjct: 114 attcatatagatatcaatgaatctaaacatatatgtgtgtctagattcattaacatatat 55
Query: 106 ataaatgtg 114
|| ||||||
Sbjct: 54 atgaatgtg 46
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcatt 96
|||||||| || |||||||||||||| | | |||||||| ||||||||||
Sbjct: 49 attcatatatatgttaatgaatctagacacacatatatgtttagattcatt 99
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||| ||| ||||||||||||| | | ||| |||||||||||||||| ||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacacatacatgtctagattcattaacatatat 31
Query: 106 ataaatgtg 114
|| ||||||
Sbjct: 30 atgaatgtg 22
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaa 142
||||||||||||||| |||| | | |||||||| ||| ||||| | |||||||||| |
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 143 aacggagggagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 86 ctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaac 145
|||||||||||| |||| |||| ||||| | ||| ||||| | |||||||| | ||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 146 ggagggagta 155
||||||||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 9e-06
Identities = 121/152 (79%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||| |||||| | ||||| |||| || |||||||| ||| |||||||
Sbjct: 9 tcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatga 68
Query: 66 atctagatagata--tatatgtctagattcattagcatcaatataaatgtgagaaatttt 123
||||| ||| ||| | | ||| ||||||||||| |||| |||| |||||| | ||| |
Sbjct: 69 atctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaatgct 128
Query: 124 agaatgacttacattgtaaaacggagggagta 155
|||| | |||| | | | ||||||||||||||
Sbjct: 129 agaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 87 tagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaacg 146
||||||||||| |||| |||| |||||| | ||| ||||| | |||||||| | |||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 147 gagggagta 155
|||||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 131 cttacattgtaaaacggagggagta 155
|||||||||||||||||||||||||
Sbjct: 84 cttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 48.1 bits (24), Expect = 4e-05
Identities = 62/75 (82%), Gaps = 6/75 (8%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 105
|||||||||||| | |||||||||||| |||| ||||||||||||| |||||||
Sbjct: 74 attcatattgatgtcaatgaatctagacagat------gtctagattcattgacatcaat 21
Query: 106 ataaatgtgagaaat 120
|| |||||| |||||
Sbjct: 20 atgaatgtgggaaat 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 83 tgtctagattcattagcatcaatataaatgtgagaaat 120
|||||||||||||| ||||||||| |||||| |||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaat 83
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
|||||| ||||||||||| |||| |||| ||||| | ||| ||||| | |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 140 taaaacggagggagta 155
| ||||||||||||||
Sbjct: 121 tgaaacggagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattg 139
|||||| ||||||||||| |||| |||| ||||| | ||| ||||| | |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 140 taaaacggagggagta 155
| ||||||||||||||
Sbjct: 20 tgaaacggagggagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 76 atatatatgtctagattcattagcatcaatataaatgtgagaaattttagaatgacttac 135
|||||||||||||||||||||| ||| |||| |||||| | ||| ||||| | ||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 136 attgtaaaacggagggagta 155
| | | ||||||||||||||
Sbjct: 113 aatttgaaacggagggagta 132
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 85 tctagattcattagcatcaatataaatgtgagaaattttagaatgacttacattgtaaaa 144
||||||||||||| |||| ||| ||||||| | ||| ||||| | |||||||| | |||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 145 cggagggagta 155
| |||||||||
Sbjct: 15 ctgagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 46 attcatattgatattaatgaatctagatagatatatatgtctagatt 92
|||||||| ||| |||||||||||||||| || || ||||||||||
Sbjct: 115 attcatatagatgttaatgaatctagatatatgtaggtgtctagatt 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 119/150 (79%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaa-tga 65
|||| |||||||| |||||| | ||||| |||| || |||||||| ||| |||| | |
Sbjct: 10 cctccgtttcatattataagactttctagcattacccacattcatatagatgttaaatta 69
Query: 66 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaattttag 125
||||||| | || |||| ||||||||||||| |||| |||| |||||| | ||| |||
Sbjct: 70 atctagacacctacatatatctagattcattaacatctatatgaatgtgggcaatgctag 129
Query: 126 aatgacttacattgtaaaacggagggagta 155
|| | |||| | | | ||||||||||||||
Sbjct: 130 aaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 6 tcctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatga 65
||||| |||||||| |||||| | ||||| |||| || |||||||| ||| |||||||
Sbjct: 122 tcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatga 63
Query: 66 atctaga 72
|||||||
Sbjct: 62 atctaga 56
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 7 cctctgtttcataatataagtcattctaacatttttcatattcatattgatattaatgaa 66
|||| |||||||||| |||| | ||||| |||| ||||||||||| ||| |||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 67 tctaga 72
||||||
Sbjct: 70 tctaga 75
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 gtttcataatataagtcattctaacatttt 41
|||||| |||||||||||||||| ||||||
Sbjct: 79 gtttcacaatataagtcattctagcatttt 50
