miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 138/154 (89%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| |||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 79 gtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| | ||||||||| |||||||| ||||| ||| || |||||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| |||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| ||| | || |||||||||| |||||||| || || ||||| |||||||||
Sbjct: 65 atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 139 agaaagtcttgtattatgaaacggagggagtata 172
| |||||||| ||||||||||||||||||||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagtata 158
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| |||||| ||| |||| ||| |||| |||||||| |||||||
Sbjct: 158 tatactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgt 99
Query: 77 tagtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
|| | |||||| ||| || |||||||||||| |||||||| ||||| ||| || ||||||
Sbjct: 98 taatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||||||||||||| |||||| ||| |||| ||| |||| ||| ||||||||||||||
Sbjct: 3 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Query: 77 tagtaaatctatacaaatatgtg--tctagatttattaacatatatataaatatgagcaa 134
|| | |||||| | | ||||||| |||||||| |||||||| ||||| ||| |||||||
Sbjct: 63 taatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 122
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
||||| |||||||| ||||||||||||||||||||
Sbjct: 123 tgctaaaaagtcttacattatgaaacggagggagta 158
Score = 113 bits (57), Expect = 9e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||||||| |||| || ||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 79 gtaaatctatacaaa--tatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| | ||| | |||||||| |||||||| ||||| ||| || ||||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
|||||||||||| ||||||||||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtata 3
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| | |||| ||| |||||||| |||||||| ||||||||||||||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 101
Query: 77 tagtaaatctatacaaat--atgtgtctagatttattaacatatatataaatatgagcaa 134
|| | |||||| ||| || || | ||||| || |||||||| ||||| |||||| ||||
Sbjct: 100 taatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaa 41
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
| |||||||||||| |||||||||||||||||||||
Sbjct: 40 tactagaaagtcttatattatgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| ||||| ||| |||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| || || ||| | | || |||||||||| |||||||| ||||| ||| || ||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
||| |||||||| ||| ||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagtata 160
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| | |||| ||| |||||||| |||||||| ||||||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 62
Query: 77 tagtaaatctatacaaat--atgtgtctagatttattaacatatatataaatatgagcaa 134
|| | |||||| ||| || || | ||||| || |||||||| ||||| |||||| ||||
Sbjct: 63 taatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaa 122
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
| |||||||||||| |||||||||||||||||||||
Sbjct: 123 tactagaaagtcttatattatgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| ||||| ||| |||| |||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| || || ||| | | || |||||||||| |||||||| ||||| ||| || ||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
||| |||||||| ||| ||||||||||||||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagtata 3
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||||||||||||| |||||| ||| |||| ||| |||| ||| ||||||||||||||
Sbjct: 160 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 101
Query: 77 tagtaaatctatacaaatatgtgt--ctagatttattaacatatatataaatatgagcaa 134
|| | |||||| | | |||||||| ||||||| |||||||| ||||| ||| |||| ||
Sbjct: 100 taatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaa 41
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
||||| |||||||| ||||||||||||||||||||
Sbjct: 40 tgctaaaaagtcttacattatgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||||||| ||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 79 gtaaatctatacaaa--tatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| | ||| | |||||||| |||||||| ||||| ||| || ||||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
|||||||||||| ||||||||||||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagtata 160
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 79 gtaaatctatacaaat--atgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| || |||||| |||||| |||||| | ||||| ||||||||||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| ||| |||| ||||| |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 79 gtaaatctatacaaata--tgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| ||| | |||||||||| |||||||| || || |||||| ||||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||| |||||||| ||| ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 121 bits (61), Expect = 4e-27
Identities = 137/162 (84%), Gaps = 4/162 (2%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||||||||||||||| ||| | ||| |||| ||| |||| ||| |||||||||||||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 76 ttagtaaatctatacaaatatgtgtct----agatttattaacatatatataaatatgag 131
||| | |||||||| | |||||||| | ||||| |||||||| ||||| ||| || |
Sbjct: 62 ttaatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtggg 121
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagtatat 173
||||||||||||||||| || |||||||||||||||||||||
Sbjct: 122 caatgctagaaagtcttataatatgaaacggagggagtatat 163
Score = 97.6 bits (49), Expect = 5e-20
Identities = 134/162 (82%), Gaps = 4/162 (2%)
Strand = Plus / Minus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||||| ||||||||| ||| | ||| |||| ||| |||| ||| |||||||||||||
Sbjct: 163 atatactccctccgtttcatattataagactttctagcattgcccacattcatatagatg 104
Query: 76 ttagtaaatctatacaaa----tatgtgtctagatttattaacatatatataaatatgag 131
||| | |||||||||| | ||| | | |||||| |||||||| ||||| ||| || |
Sbjct: 103 ttaatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtggg 44
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagtatat 173
||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 43 caatgctagaaagtcttataatatgaaacggaggaagtatat 2
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 111 bits (56), Expect = 4e-24
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||| |||| ||| |||||||| ||||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| ||| || | ||||||| |||||||| |||| ||||| ||||||||
Sbjct: 96 atgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgct 37
Query: 139 agaaagtcttgtattatgaaacggagggagta 170
|||||||||| ||||||||||||||||||||
Sbjct: 36 agaaagtcttacattatgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| |||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| | || ||||||||||| |||||||| ||||| ||| || |||||||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 139 agaaagtcttgtattatgaaacggagggagta 170
|||||||||| ||||||||||||||| ||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| |||||| ||| |||| ||| |||||| | |||||||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 78 agtaaatctatacaaata--tgtgtctagatttattaacatatatataaatatgagcaat 135
| | |||||| ||| ||| ||||| |||||| |||||||| ||||| ||| || |||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaa 123
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||||||||||||||||||||
Sbjct: 124 cctagaaagtcttacattatgaaacggagggagta 158
Score = 103 bits (52), Expect = 9e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| ||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| | ||| |||| |||||||||| |||||||| ||||| ||| | |||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtat 171
|||||||||||| ||||||||||||||| |||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| |||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| ||||||| ||| |||||||| ||||| |||||| ||| |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| || ||||||||||||||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | ||| ||| |||| ||||| || ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 79 gtaaatctatacaa--atatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||| || ||| |||| |||||||||| |||||||| ||||| |||||| |||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| |||||||| ||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 79 gtaaatctatacaaatatg--tgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| ||||| |||||| ||| |||||||| ||||| |||||| ||| |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| ||||| || ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 79 gtaaatctatacaa--atatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||| || ||| |||| |||||||||| |||||||| ||||| ||| || |||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 132/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
|||||||||||| |||| |||||| ||| |||| ||| ||| ||| ||| ||||||||
Sbjct: 2 atatacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagata 61
Query: 76 ttagtaaatctatacaaatatgtgt--ctagatttattaacatatatataaatatgagca 133
|| | |||||| ||| |||||||| ||||||| |||| ||||||||| ||| || |||
Sbjct: 62 ctaatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggca 121
Query: 134 atgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||| ||||||||||||||||||||
Sbjct: 122 atgctagaaagtcttacattatgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 8e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| |||| ||| ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 79 gtaaatctat--acaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| |||||||||| |||| || ||||||||| || |||| |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtatat 173
|||||||||||| |||||||||| |||| |||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagtatat 2
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| |||| ||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||| | ||| | || |||||||||||| |||||||| ||||| |||||| | ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
|||||| | ||| ||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtata 160
Score = 73.8 bits (37), Expect = 8e-13
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| |||||| ||||| || ||| ||| ||||||||||||||||||
Sbjct: 160 tatactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgt 101
Query: 77 tagtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaa 134
|| | ||||| | ||| || | | |||| ||| |||||||| ||||| || || ||||
Sbjct: 100 taatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaa 41
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
|||||||| | ||| ||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 9e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| |||| |||| |||||| ||| |||||||| |||| ||| |||||||||||| | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 79 gtaaatctatacaaatatgtgt--ctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||||||| ||||||| |||||||||||||| ||| || |||| |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtat 171
|||||||||||| |||||||||| |||| |||||
Sbjct: 38 ctagaaagtcttacattatgaaaccgaggaagtat 4
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| ||||||| |||| ||| ||||| ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 79 gtaaatctatacaaatatgtgt--ctagatttattaacatatatataaatatgagcaatg 136
| |||||| | | |||||||| ||||||| |||||||| ||||| ||| |||||||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||| ||||||| ||| ||||||||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/110 (82%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 63 attcatatagatgttagtaaatctatacaaa--tatgtgtctagatttattaacatatat 120
|||||||||||||||| | |||||| ||| | ||| | |||||||| |||||||| |||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatatatatctagattcattaacatctat 108
Query: 121 ataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
| ||| || |||||| || |||||||| ||| ||||||||||||||||
Sbjct: 109 gtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||| |||| ||| ||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 79 gtaaatctatacaaatatg--tgtctagatttattaacatatatataaatatgagcaatg 136
|||||||||| | ||| |||||||||| |||| ||| ||||| ||| || ||||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
||||||||||| ||| ||||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagtata 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| | |||| ||| |||| || |||| ||| |||||||||||||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgc 101
Query: 77 tagtaaatctataca--aatatgtgtctagatttattaacatatatataaatatgagcaa 134
|| | |||||| ||| | ||| | | ||||||||||| ||| ||||| ||| || | ||
Sbjct: 100 taatgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaa 41
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
||||| |||||||| ||||||||||||||| ||||
Sbjct: 40 tgctataaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| ||| | ||| |||| ||| |||| ||| ||||||||||||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| |||| ||| || |||||||| ||||| | | || ||||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtat 171
|||||||||||| || |||||||||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtat 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| ||| | ||| |||| ||| |||| ||| | |||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63
Query: 78 agtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaat 135
| | || ||||||| |||| | ||||||||| |||| ||| ||||| ||| || |||||
Sbjct: 64 aatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||| || ||||||||||||| ||||
Sbjct: 124 gctagaaagtcttataatatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||||| |||| ||| ||||||| ||||| | | |||||| |||||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| ||| || ||| || | |||| |||||| |||||||| ||||| || |||||||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| ||| | ||| |||| ||| ||||||||| ||||||||||||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 79 gtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| | ||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||||||||||| || ||||||||||||| ||||
Sbjct: 38 ttagaaagtcttataatatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| ||| | ||| |||| || |||| ||| ||||||||| |||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| |||| |||||| ||| |||| ||||| || ||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| || ||||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| ||| |||| || ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 79 gtaaatctatacaa--atatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||||| | ||||||||||||||| |||| ||| ||| | ||| || ||||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||| |||| ||| |||| ||| ||||| ||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| || | |||||| |||||||| ||||| ||| | ||||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatga 124
Query: 158 aacggagggagtat 171
||||||| ||||||
Sbjct: 125 aacggagagagtat 138
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 111 taacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggag 164
|||||| ||||||||| || |||||||||||||||||| ||||||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 25 ctccgttttataatgcaagtctttttagtattgtccatattcatatagatgttagtaaat 84
|||||||| |||||| ||| |||| ||| |||||||||||| |||||||||||| | |||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 85 cta 87
|||
Sbjct: 71 cta 69
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
|||||||| ||| |||||||| ||||| ||| || |||||||||||||||||| |||||
Sbjct: 79 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 20
Query: 156 gaaacggagggagtata 172
|||||||||||||||||
Sbjct: 19 gaaacggagggagtata 3
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 113 acatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||| ||||| ||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| |||||| ||| |||| ||| |||| ||| ||||||||||||||
Sbjct: 3 tatactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Query: 77 ta 78
||
Sbjct: 63 ta 64
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||| ||||||| ||| || |||||||||||||||||| || |||||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 18
Query: 158 aacggagggagta 170
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||||| || ||||||| ||||| ||||
Sbjct: 90 caatgctagaaagtcttataatatgaaaaggaggaagta 128
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||| ||||||| ||| || |||||||||||||||||| || |||||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 115
Query: 158 aacggagggagta 170
|||||||||||||
Sbjct: 116 aacggagggagta 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||||| || ||||||| ||||| ||||
Sbjct: 43 caatgctagaaagtcttataatatgaaaaggaggaagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| |||| ||| |||| ||| || |||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 79 gtaaatctatacaaata--tgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| ||| | |||||||||| |||| ||| || || ||| || ||||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtat 171
|||||||||||| ||| |||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| | |||| ||| |||| ||| |||| ||| |||||| |||||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 78 agtaaatctatacaaat--atgtgtctagatttattaacatatatataaatatgagcaat 135
| | |||||| ||| || |||||| |||||| |||||||| ||||| || || |||||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaat 40
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||| ||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||||||||| |||||| ||| | || ||||||||||||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| ||||||| || |||| ||||| |||| |||||||| || || ||| || | ||||||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 139 agaaagtcttgtattatgaaacggagggagta 170
| || | ||| ||| ||||||||||| ||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| |||||| ||| ||| |||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||| | ||| |||| || |||||| |||||||| ||||| ||| ||| ||||||
Sbjct: 65 atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 139 agaaagtcttgtattatgaaacggagggagta 170
| || | |||| ||||||||||||||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| | |||| ||| |||| |||||||| ||| | ||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 78 agtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaat 135
| | |||||| |||| | || |||||||||| |||||||| || || |||||| |||||
Sbjct: 99 aatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaat 40
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||| ||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| |||| ||| |||| |||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 79 gtaaatctatacaaa--tatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| | ||||| | |||||| |||||||| |||| | || |||||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtat 171
|||||||||||| ||| |||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| ||||| ||| || |||||||||||||||||| || |||||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatga 113
Query: 158 aacggagggagtatat 173
|||||||| |||||||
Sbjct: 114 aacggaggaagtatat 129
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||| |||| || ||||||||||||||||||
Sbjct: 44 gcaatgctagaaaatcttataatatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||||||||||||||| ||| | ||| |||| ||| |||| ||| |||||||||||||
Sbjct: 129 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 70
Query: 76 ttagtaaatcta 87
||| | ||||||
Sbjct: 69 ttaatgaatcta 58
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 95 atgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtatta 154
|||||| |||||| |||||||| ||||| ||| || |||||||||||||||||| ||||
Sbjct: 65 atgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatta 124
Query: 155 tgaaacggagggagta 170
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| |||| ||| ||||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 79 gtaaatctataca 91
| ||||||||||
Sbjct: 80 atgaatctataca 68
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 109 attaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacgga 163
|||||||| ||||| ||| | |||||||||||||||||| |||||||||||||
Sbjct: 66 attaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| ||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 160 cggagggagta 170
| |||| ||||
Sbjct: 15 cagaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||| ||| ||||| |||||| | |||||||||||||||| ||||||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
||||||||||||||||||||| ||||| ||| || ||||||||||||||||| ||| |
Sbjct: 66 tgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgt 125
Query: 156 gaaacggagggagta 170
|||||||||||||||
Sbjct: 126 gaaacggagggagta 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| ||| |||||||| ||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 79 gtaaatcta 87
||||||||
Sbjct: 80 ataaatcta 72
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagtatatg 174
||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 42 aatgctaaaaagtcttacattgtgaaacggagggagtatatg 1
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
||||||||||||||||||||| ||| | ||| || ||||||||||||||||| || |||
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatat 20
Query: 156 gaaacggagggagta 170
|||||||||||||||
Sbjct: 19 gaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| ||| | ||| |||| ||| |||||||| |||||||||||||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagtat 171
||||||||||||||||| || ||||||||||||| |||||
Sbjct: 99 caatgctagaaagtcttataatatgaaacggaggaagtat 138
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/106 (85%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatatgtgt--ct 102
|||| ||| |||| ||| |||||||||||||||| | |||||| || |||||| | ||
Sbjct: 108 ctttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcct 49
Query: 103 agatttattaacatatatataaatatgagcaatgctagaaagtctt 148
||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 48 agattcattaacatatatatgaatatgggcaatgctagaaagtctt 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 88/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaa--tatgtgtct 102
|||| ||| |||| ||||||||||||| |||||| | |||||| || | ||| || ||
Sbjct: 7 ctttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcct 66
Query: 103 agatttattaacatatatataaatatgagcaatgctagaaagtctt 148
||||| |||||||| ||||| ||| || ||||||||||||||||||
Sbjct: 67 agattcattaacatctatatgaatgtgggcaatgctagaaagtctt 112
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
||||||||||||||||| ||||| ||| || ||||||||||||||||| |||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 160 cggagggagtatatg 174
||||||||||||||
Sbjct: 15 tggagggagtatatg 1
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 15 catatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagat 74
|||||||| ||||| ||| |||||| ||| |||| ||| |||||||| ||||||||||||
Sbjct: 1 catatactccctccatttcataatgtaagactttctagcattgtccacattcatatagat 60
Query: 75 gttagtaaatcta 87
|||| ||||||||
Sbjct: 61 gttaataaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagtatatg 174
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 85 gcaatgctagaaagtcttacattatgaaacggagggagtatatg 128
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| |||| ||||||| | |||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 79 gtaaatctatacaaat--atgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| || || ||||||||||||||||||| || || || || ||||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 83.8 bits (42), Expect = 8e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||||||||| ||| || | |||||||||||||||| ||
Sbjct: 55 atatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataa 114
Query: 153 tatgaaacggagggagta 170
| ||||||||||||||||
Sbjct: 115 tttgaaacggagggagta 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 113 acatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| ||| || | ||| |||||||||||| || ||||||||||||| ||||
Sbjct: 62 acatatatatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
||||||||||||||||||| ||||| ||| || |||||||||||||||||| ||| |||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtga 121
Query: 158 aacggagggagta 170
|||||||| ||||
Sbjct: 122 aacggaggaagta 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| |||| ||| |||| ||| ||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 79 gtaaatcta 87
||||||||
Sbjct: 74 ataaatcta 66
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 118 tatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||| ||| ||| ||||||||||||||||| | ||||||||||||||||||
Sbjct: 57 tatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/155 (82%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| |||||||| |||||||| ||| || ||||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 79 gtaaatctatacaaat--atgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| | | || |||| |||||||| |||||||| |||||| | || |||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatata--tgtggacaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtat 171
||||||||||| |||||||||||||||||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 124/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| |||||| ||| |||| || |||||||| || |||||||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtt 61
Query: 78 agtaaatctatacaaata--tgtgtctagatttattaacatatatataaatatgagcaat 135
| | |||||| | | ||| | | |||||||| ||||| || || |||||| || ||||
Sbjct: 62 aatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaat 121
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
|||| |||||||| ||| ||||||||||| ||||
Sbjct: 122 gctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 22 ttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgttagta 81
||||||||||| ||||| ||||| || ||| |||| ||| |||||||||||||||| |
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 82 aatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgctaga 141
||||| ||| ||||||| ||||||| |||| || |||| ||| || ||||| |||||
Sbjct: 68 aatctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 142 aagtcttgtattatgaaacggagggagta 170
| | ||| |||| ||||||||||||||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
Score = 69.9 bits (35), Expect = 1e-11
Identities = 119/147 (80%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | ||| ||||| || ||| |||| ||| |||| ||||||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| || |||| |||| ||||| |||||||| ||||| ||| || ||||||||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 139 agaaagtcttgtattatgaaacggagg 165
|||| | ||| ||||||||||||||||
Sbjct: 36 agaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/119 (84%), Gaps = 2/119 (1%)
Strand = Plus / Plus
Query: 54 attgtccatattcatatagatgttagtaaatctatacaaatatgtgt--ctagatttatt 111
|||| ||| ||||||||| |||||| |||||||| ||| |||| ||| | ||||| |||
Sbjct: 40 attgcccacattcatatatatgttaataaatctagacatatatatgtgccaagattcatt 99
Query: 112 aacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||| ||| || |||||||||||||||||| || ||||||||||| ||||
Sbjct: 100 aacatatatatgaatgtgggcaatgctagaaagtcttataacttgaaacggaggtagta 158
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| ||||||||||||||||||||||||| ||| || ||||||| |||||||||| ||
Sbjct: 82 atatatgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttataa 23
Query: 153 tatgaaacggagggagtat 171
||||||||||| |||||
Sbjct: 22 cttgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 79.8 bits (40), Expect = 1e-14
Identities = 110/131 (83%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatat--gtgtct 102
|||| ||| |||| ||| |||||||||||||||| | |||||| | | || | ||||||
Sbjct: 133 ctttctagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtct 74
Query: 103 agatttatt-aacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
||||| ||| ||||| ||||| ||| || | |||||||||||||||| || |||||||||
Sbjct: 73 agattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacg 14
Query: 162 gagggagtata 172
|||||||||||
Sbjct: 13 gagggagtata 3
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| ||||| ||| || |||||||||||||||||| || | |||||
Sbjct: 89 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaa 148
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 149 cggagggagta 159
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 101/121 (83%), Gaps = 4/121 (3%)
Strand = Plus / Minus
Query: 54 attgtccatattcatatagatgttagtaaatctatacaaatat----gtgtctagattta 109
|||| ||| |||||||||||||||| | |||||||||| | || |||| |||||| |
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 110 ttaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagt 169
||||||| ||||| ||| || ||||| |||||||||||| || |||||||| ||||||||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagt 6
Query: 170 a 170
|
Sbjct: 5 a 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctataca 91
|||| ||| |||| ||| |||||||||||||||| | ||||||||||
Sbjct: 31 ctttctagaattgcccacattcatatagatgttaatgaatctataca 77
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||| ||| ||||| ||| || |||||| ||||||||||| ||
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Query: 153 tatgaaacggagggagtat 171
|||||||||||||||||||
Sbjct: 121 tatgaaacggagggagtat 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatata 71
||||||||||||||||||||| | ||| || | |||||||| ||| |||||||||
Sbjct: 2 atatacttcctccgttttatattataagactatctagtattgcccacattcatata 57
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
||||||||||||||||| ||||||||||||| |||||||||| | ||| ||| |||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 135 cggagggagta 145
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| |||| ||| || ||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||| | ||| | || |||||||||||| |||||||| ||||| ||| | | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || ||| ||| | | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 79 gtaaatctatacaaatatgtgt--ctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| | || | | ||| ||| |||||||| |||||| || || ||||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 113 acatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggaggga 167
||||||||||| || || |||||||||||||||||| ||||||||||||||||||
Sbjct: 62 acatatatatagatgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
Score = 67.9 bits (34), Expect = 5e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||||||| |||||| |||||||| |||||| || || |||||| ||||||||||| |||
Sbjct: 57 atatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttatat 116
Query: 153 tatgaaacggagggagta 170
| | ||||||||| ||||
Sbjct: 117 tgtaaaacggaggtagta 134
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || ||| |||| | ||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| ||| | | || | |||||||| |||||||| |||| ||| |||||| ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| ||||| ||||| |||||||||||| | ||| |||||||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| | | |||| |||||||||| |||||||| |||| ||| |||| ||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 7e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 101 ctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaac 160
||||||| |||||||| |||| |||||| | |||||||||| | ||| ||| ||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 161 ggagggagta 170
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatatgtgt--ct 102
|||| ||| |||||||| ||||||||| |||||| | |||||| ||| ||||||| ||
Sbjct: 7 ctttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcct 66
Query: 103 agatttattaacatatatataaatatgagcaatgctagaaagtctt 148
||||| |||||||| ||||| ||| || ||||||||||||||||||
Sbjct: 67 agattcattaacatctatatgaatgtgggcaatgctagaaagtctt 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctat--acaaatatgtgtct 102
|||| ||| |||| ||| |||||||||||||||| | |||||| ||| ||| |||||
Sbjct: 108 ctttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtct 49
Query: 103 agatttattaacatatatataaatatgagcaatgctagaaagtctt 148
||||| |||||||||||||| ||| || |||||||||||||||||
Sbjct: 48 agattcattaacatatatatgaatgtggacaatgctagaaagtctt 3
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| | || || |||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 79 gtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaatg 136
| |||||| | | || | | ||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || ||| |||| | ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 79 gtaaatctatac--aaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | | || | |||||||| |||||||| |||| ||| |||||| ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctat--acaaatatgtgtct 102
|||| ||| |||| ||| |||||||||||||||| | |||||| ||| |||| | |||
Sbjct: 108 ctttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatct 49
Query: 103 agatttattaacatatatataaatatgagcaatgctagaaagtctt 148
||||| |||||||||||||| ||| || ||||||||||||||||||
Sbjct: 48 agattcattaacatatatatgaatgtgggcaatgctagaaagtctt 3
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatcta--tacaaatatgtgtct 102
|||| ||| |||| ||| ||||||||| |||||| | |||||| || | ||||||| ||
Sbjct: 7 ctttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcct 66
Query: 103 agatttattaacatatatataaatatgagcaatgctagaaagtctt 148
||||| |||||||| ||||| ||| || ||||||||||||||||||
Sbjct: 67 agattcattaacatctatatgaatgtgggcaatgctagaaagtctt 112
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| | ||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 79 gtaaatctatacaaata--tgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||||||| || |||||||||||| ||| |||| ||| | || || ||||||
Sbjct: 65 atggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||||||||| |||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaagcggaggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
||||||||||| || ||||| ||| |||| ||| |||| ||| |||| |||||||| |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 79 gtaaatctatacaaatat--gtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| || | |||| ||||| |||||||| ||||| ||| | | || ||
Sbjct: 98 atgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagtg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||||||| |||| ||| ||| ||| |||||| |||||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| | ||| |||| |||||||||| |||||||| ||| | || ||||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||||||||||| ||| ||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||||||| |||||| |||||||| || || ||| || | ||||||||||||||||| ||
Sbjct: 82 atatgtgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcat 23
Query: 153 tatgaaacggagggagta 170
||||||||||||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 2e-13
Identities = 95/112 (84%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 63 attcatatagatgttagtaaatctatacaaat--atgtgtctagatttattaacatatat 120
|||||| ||||||||| | |||||| ||| || |||||| |||||| ||||||||||||
Sbjct: 49 attcatttagatgttaatgaatctaaacatatgtatgtgtttagattcattaacatatat 108
Query: 121 ataaatatg--agcaatgctagaaagtcttgtattatgaaacggagggagta 170
||| |||| |||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 109 atatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| || || ||| || | |||||||||||||||| ||| ||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14
Query: 162 gagggagta 170
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 101 ctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaac 160
||||||| |||||||| ||||| || || |||||||||||||||||| ||||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 161 ggagggagta 170
||||||||||
Sbjct: 138 ggagggagta 147
Score = 71.9 bits (36), Expect = 3e-12
Identities = 122/152 (80%), Gaps = 9/152 (5%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||| |||| ||| |||| ||| || |||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| ||||||||||| |||||||| || | ||| |||||||||||
Sbjct: 87 atgaatcta---------gtgtctagattcattaacatctaagtgaatgtgagcaatgct 37
Query: 139 agaaagtcttgtattatgaaacggagggagta 170
|||||||||| ||| ||||||||||| ||||
Sbjct: 36 agaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||||| |||||||| |||||||| ||| |||| || |||||||||||||||||| ||
Sbjct: 82 atatgtttctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacat 23
Query: 153 tatgaaacggagggagta 170
|||||||| |||||||||
Sbjct: 22 tatgaaactgagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 91 gcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| |||| |||||||| |||||||||| | ||| ||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacat 23
Query: 153 tatgaaacggagggagta 170
||||||||||||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || ||| ||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 79 gtaaatctatacaaatat 96
| |||||| ||| ||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| | |||||||||| |||||| ||| |||||||||||| ||||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 78 agtaaatcta 87
| ||||||||
Sbjct: 77 aataaatcta 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
||||||||||||||||||| |||| |||||| | ||||||| || | |||| ||| |||
Sbjct: 64 tgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtga 123
Query: 158 aacggagggagtat 171
|||||||| |||||
Sbjct: 124 aacggaggaagtat 137
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 73.8 bits (37), Expect = 8e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
|||||||| ||| |||||||| ||||| ||| || ||||||||| ||||| || |||||
Sbjct: 68 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattat 127
Query: 156 gaaacggagggagtata 172
|||||||||||||||||
Sbjct: 128 gaaacggagggagtata 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 113 acatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||| ||||| ||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| |||||| || |||||||| |||| ||| ||||||||||||||
Sbjct: 144 tatactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgt 85
Query: 77 ta 78
||
Sbjct: 84 ta 83
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||| ||||||||| |||||| ||| |||| ||| |||| ||| ||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| ||||| ||| || |||||||||||||| ||| |||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 158 aacggagggagta 170
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 73.8 bits (37), Expect = 8e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| |||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 79 gtaaatcta 87
| ||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 125 atatgagcaatgctagaaagtcttgtattatgaaacggagggagtata 172
|||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77 atataagcaatgctagaaagtcttacattatgaaacggagggagtata 124
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 101 ctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaac 160
||||||| ||||||| ||||| ||| || |||||||||||||||||| || ||||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15
Query: 161 ggagggagtatat 173
||||| |||||||
Sbjct: 14 ggaggaagtatat 2
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||||||||||||||| ||| | ||| |||| ||| |||| ||| |||||||||||||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 76 tta 78
|||
Sbjct: 62 tta 64
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 117 atatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||| ||| || |||||||||||||||||| || | ||||| ||||| ||||
Sbjct: 81 atatatgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| ||||| ||| || ||||||||||||||||| |||||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatga 119
Query: 158 aacggagggagta 170
||| |||||||||
Sbjct: 120 aacagagggagta 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
||||||||||| ||| |||||| ||| |||| ||| |||||||| ||||||||||||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| |||| |||| |||||| ||| |||| ||| |||||||| ||||||||||||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 79 gtaaatcta 87
| ||||||
Sbjct: 72 atgaatcta 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagtat 171
||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 43 caatgctagaaagtcttacattatgaaaaggaggaagtat 4
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||||||||| ||| || ||||||||||||||||| || |||||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 158 aacggagggagta 170
||| |||| ||||
Sbjct: 123 aacagaggaagta 135
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 112 aacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||| ||| || | |||||||||||||||| || || |||||||||| ||||
Sbjct: 63 aacatatatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| |||||||||| |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 79 gtaaatctataca 91
||||| ||||||
Sbjct: 65 ataaatttataca 77
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
|||||||||||| ||||||| ||||| ||| || ||||||||||||||||| |||||
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 156 gaaacggaggga 167
||||||||||||
Sbjct: 94 gaaacggaggga 105
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 24 cctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
||||||||| |||||| ||| |||| ||| |||||||| ||||||||||||||||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 49
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
|||||||||||| ||||||| ||||| |||||| |||||||||||||||| |||||
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 156 gaaacggaggga 167
||||||||||||
Sbjct: 19 gaaacggaggga 8
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 24 cctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
||||||||| |||||| ||| |||| ||| ||| ||||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgtta 64
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 124 aatatgagcaatgctagaaagtcttgtattatgaaacggagggagtat 171
||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 51 aatatgagcaatgctagaaagtcttatattataaaacggaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 116 tatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||| |||||| ||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 51 tatatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatata 71
|||||||||||| | ||||| ||| |||| ||| ||||||||||||||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcatata 53
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
||||| |||||| |||||||| ||||| ||| || |||||||||||||||||| || |||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 117
Query: 156 gaaacggagggagta 170
||||| |||| ||||
Sbjct: 118 gaaactgaggaagta 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||||||| || ||||||||||||||||||
Sbjct: 44 gcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
||||||||||||||||||| ||||| ||| || ||||||||||| ||| |||||||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatga 124
Query: 158 aacggagggagtata 172
|||||||||||||||
Sbjct: 125 aacggagggagtata 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 17 tatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||| ||||||||| |||||| |||| || ||| |||||||| ||||||||||||||
Sbjct: 139 tatactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgt 80
Query: 77 tagtaaatcta 87
|| ||||||||
Sbjct: 79 taataaatcta 69
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| |||||| |||| ||| ||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 79 gtaaatctatacaaa--tatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| | | | | |||||||| |||||||| ||||| ||||| | || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| || |||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | | || ||| |||||| |||| ||| ||||| ||| || ||||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||| || | ||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 96 tgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattat 155
||||| |||||| |||||||| ||||| ||| || |||||||||||||||||| || |||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 117
Query: 156 gaaacggagggagta 170
||||| |||| ||||
Sbjct: 118 gaaactgaggaagta 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||||||| || ||||||||||||||||||
Sbjct: 44 gcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||| |||| ||| ||||||||||| |||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| ||| | | | |||||||||| ||||||| || || ||| || | ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||| ||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| ||||| ||||| ||||||||||||||||| ||| |||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 162 gagggagta 170
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 79 gtaaatctatac--aaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||||||| | |||| | |||||||| |||||||| |||| ||| || | ||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 79 gtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaatg 136
| |||||| | |||||| | || |||||| |||||||| |||| |||||| ||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
|||||||||||||||| | |||| ||||| || ||| ||| || | |||||||| ||||
Sbjct: 2 atatacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatg 61
Query: 76 ttagtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaat 135
||| | ||| || ||| |||| |||||||||| |||||||| |||| ||| || | |||
Sbjct: 62 ttaatgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaat 121
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
||||||| | ||| ||| || |||||||||||||
Sbjct: 122 gctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 112 aacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||| ||||| ||||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
|||| ||||||||||| |||| ||| |||| ||| |||| ||||||||||||||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatgtt 50
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 132 caatgctagaaagtcttgtattatgaaacggagg 165
|||||||||||||| || |||||||||||||||
Sbjct: 43 caatgctagaaagttttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| ||||| ||| || |||||||||||| | ||| ||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacat 114
Query: 153 tatgaaacggagggagtatatg 174
||||||| ||||| ||||||||
Sbjct: 115 tatgaaatggaggaagtatatg 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 113 acatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtata 172
|||||||||| ||||| | |||||||||| | ||| ||||||||||||||||||||||
Sbjct: 62 acatatatatgaatataggtaatgctagaatgacttacattatgaaacggagggagtata 3
Query: 173 tg 174
||
Sbjct: 2 tg 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 15 catatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagat 74
|||||||||||||| ||| |||||| ||||| || ||| |||| || ||||||||||||
Sbjct: 136 catatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagat 77
Query: 75 gttagtaaatctatacaaatat 96
|||| | |||||| ||| ||||
Sbjct: 76 gttaatgaatctagacatatat 55
Score = 44.1 bits (22), Expect = 7e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 15 catatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagat 74
|||||||| ||||||||| |||||| ||||| || ||| ||| | ||||||||||| ||
Sbjct: 1 catatactccctccgtttcataatgtaagtcattctagcattacctatattcatatatat 60
Query: 75 gt 76
||
Sbjct: 61 gt 62
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 124/153 (81%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || ||| ||| | ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 79 gtaaatc--tatacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
|| |||| |||| | |||| |||||||||| | |||| | |||| ||| || | ||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagt 169
|||||| | ||| |||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 119/149 (79%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 24 cctccgttttataatgcaagtctttttagtattgtccatattcatatagatgttagtaaa 83
||||||||| |||||| ||||| || ||| ||| ||| |||||||| || |||||| ||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 84 tctatacaaatatgtgtcta--gatttattaacatatatataaatatgagcaatgctaga 141
|||| ||| |||| | | || |||| | |||| | ||||| ||||| | |||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 142 aagtcttgtattatgaaacggagggagta 170
| | ||| ||||||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| | |||||| ||||| |||||||| |||||||||| | ||| |||||||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 162 gagggagtat 171
||||||||||
Sbjct: 13 gagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| |||||| ||||| || ||| ||| |||||| |||||||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 78 agtaaatcta 87
||| ||||||
Sbjct: 64 agtgaatcta 73
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 124/153 (81%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| | |||| ||| |||| ||| ||| ||| |||||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 78 agtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgc 137
| | |||||| ||| ||||| | |||||| |||||||| | ||| || || | | |||
Sbjct: 64 aatgaatctagaca--tatgtatttagattcattaacatctttatgtatgtgggtagtgc 121
Query: 138 tagaaagtcttgtattatgaaacggagggagta 170
|| |||||||| |||| ||||||||||||||||
Sbjct: 122 taaaaagtcttatattgtgaaacggagggagta 154
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| || || ||| || |||| |||| |||||||| ||| |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtga 18
Query: 158 aacggagggagtat 171
|||||||| |||||
Sbjct: 17 aacggaggaagtat 4
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 101 ctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaac 160
|||||||||||||||| |||||||| |||| |||||||||| | ||| ||||||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 161 ggagg 165
|||||
Sbjct: 14 ggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 99 gtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaa 158
||||||||| |||||||| |||| |||||| |||||||||| | ||| ||| ||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 159 acggagggagta 170
||||||||||||
Sbjct: 134 acggagggagta 145
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
||||||||||||||| || || ||| || ||||| ||||||||||| |||| |||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 162 gagggagta 170
|||||||||
Sbjct: 116 gagggagta 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagat 74
|||||| |||||||||||||| ||| |||||||| |||| ||| |||||| |||||
Sbjct: 5 tacttcatccgttttataatgtaagactttttagcattgcccacattcatttagat 60
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| ||||| || || | |||||||||||||||| |||| |||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 162 gagggagta 170
|||||||||
Sbjct: 128 gagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| ||||| || || | |||||||||||||||| |||| |||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 162 gagggagta 170
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 118 tatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||| ||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||||||| || ||||||||||||| ||||
Sbjct: 65 gcaatgctagaaagtcttataatatgaaacggaggaagta 104
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | ||| ||||| || ||| ||| ||| |||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | |||| |||||||||| |||| ||| |||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtata 172
|||||| | ||| |||| ||||||||||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagtata 160
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| ||||||||| |||| ||| || | ||||||| || | ||| |||| |||||
Sbjct: 75 tctagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaa 16
Query: 160 cggagggagta 170
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 118 tatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtatat 173
|||||||||||| | |||||| |||||||| |||||||||||||||||||||||
Sbjct: 57 tatataaatatggacgatgctaaaaagtcttacattatgaaacggagggagtatat 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatag 72
||||||||||||| ||||| ||| ||||||||||| ||||||||| ||||||
Sbjct: 113 tacttcctccgttccataatataagactttttagtatcgtccatatttatatag 60
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 118 tatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtatat 173
|||||||||||| | |||||| |||||||| |||| |||||||||||||||||||
Sbjct: 57 tatataaatatggacgatgctaaaaagtcttatattgtgaaacggagggagtatat 2
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatag 72
|||||||||||||| |||||| ||| ||||||| || ||| ||||| ||||||
Sbjct: 113 tacttcctccgtttcataatgtaagattttttagcatcgtctatatttatatag 60
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| |||||| ||||| || ||||||| || |||||||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 78 agtaaatctatacaaatatg 97
| | |||||| |||||||||
Sbjct: 64 aatgaatctagacaaatatg 83
Score = 54.0 bits (27), Expect = 7e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| |||| ||| |||| ||| |||||| | ||| ||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 153 tatgaaacggagggagtat 171
||||||||||||| |||||
Sbjct: 22 tatgaaacggaggaagtat 4
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| ||| || || || ||||||||||||| |||| ||| |||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 162 gagggagtata 172
|||||||||||
Sbjct: 13 gagggagtata 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 128 tgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||| |||||||||||||||| |||| || |||||||| ||||
Sbjct: 96 tgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 118 tatataaatatgagcaatgctagaaagtcttgtattatgaaacggag 164
||||| |||||| |||||||||||||||||| ||||||||||||||
Sbjct: 57 tatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||| |||||||| |||||| ||| |||| ||| |||| |||||||||||||||||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcattgcccatattcatatagatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 135 tgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||| ||| ||||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggagta 98
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 124 aatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||| |||||||||||||||||| || ||||||||||||| ||||
Sbjct: 68 aatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagta 170
|||| |||||||||||| || ||||||||||||||||||
Sbjct: 43 caatactagaaagtcttatagtatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| | ||| || ||| |||||||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 79 gtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || |||| | ||||||||| |||||||| |||| ||| || ||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 101/126 (80%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 79 gtaaatctatac--aaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | |||| || ||||||| |||| ||| ||||| ||| || |||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 137 ctagaa 142
||||||
Sbjct: 38 ctagaa 33
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 128 tgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 41 tgagcaatgctagaaagacttacattatgaaacggagggagta 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtcttt 48
||||||||||||||||| |||||| ||||||||
Sbjct: 2 atatacttcctccgtttcataatgtaagtcttt 34
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 136 gctagaaagtcttgtattatgaaacggagggagtatat 173
||||||||| ||| ||||||||||||||| |||||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagtatat 2
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 61.9 bits (31), Expect = 3e-09
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 72 gatgttagtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgag 131
||||||| | |||||| | | |||| |||||||||| |||||||| |||| |||||| |
Sbjct: 51 gatgttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatggg 110
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagta 170
||||||| || | ||| |||| ||||||||||||||||
Sbjct: 111 aaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | ||| ||||| |||||| ||| |||||||||||| |||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacat 116
| |||||| ||| |||| | |||||||| ||||||||
Sbjct: 89 atgaatctagacatatatctatctagattcattaacat 52
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 127/158 (80%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| |||| || ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| ||| | |||| |||||||||| ||||||| |||| ||| || | |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagtatatg 174
|||||| | ||| ||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtatatg 162
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| ||| |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 79 gtaaatctat 88
| |||||||
Sbjct: 65 atgaatctat 74
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 125 atatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 50 atatgagcaatgctataaagtattacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 94 tatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtatt 153
||||||| || ||| |||||||| ||||| ||||||||||||||| || ||||| |||
Sbjct: 61 tatgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt 120
Query: 154 atgaaacggagggagta 170
||||||||||| ||||
Sbjct: 121 gtgaaacggaggaagta 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| | |||||| |||| ||||| |||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/97 (83%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 54 attgtccatattcatatagatgttagtaaatctatacaaatatgtgt--ctagatttatt 111
|||| ||| ||||||||||||| | | |||||| ||| |||||||| ||||||| |||
Sbjct: 102 attgcccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcatt 43
Query: 112 aacatatatataaatatgagcaatgctagaaagtctt 148
| |||| |||| ||| || ||||||||||||||||||
Sbjct: 42 agcatagatatgaatgtgggcaatgctagaaagtctt 6
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| ||| |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 79 gtaaatctat 88
| |||||||
Sbjct: 65 atgaatctat 74
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 109 attaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggag 168
|||| ||| ||||| |||||| | |||||||||||||||| || ||||||||||||| ||
Sbjct: 53 attatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggaggaag 112
Query: 169 ta 170
||
Sbjct: 113 ta 114
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagtat 171
|||||| ||||||||||| || |||||||||||||||||||
Sbjct: 44 gcaatgttagaaagtcttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 125 atatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 92 atatgagcaatgctataaagtattacattatgaaacggagggagta 137
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 94 tatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtatt 153
||||||| || ||| |||||||| ||||| ||||||||||||||| || ||||| |||
Sbjct: 81 tatgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt 22
Query: 154 atgaaacggagggagta 170
||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||| | |||||| |||| ||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| |||||| ||||| || ||| ||| |||||||||||| ||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 78 agtaaatcta 87
| | ||||||
Sbjct: 81 aatgaatcta 72
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| |||||| | |||||||||| | ||| |||||||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 160 cggagggagtat 171
|||||| |||||
Sbjct: 130 cggaggaagtat 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| |||||| | |||||||||| | ||| ||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 5e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| |||| |||||| | |||||||||| | ||| ||| |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 158 aacggagggagta 170
|||||||||||||
Sbjct: 127 aacggagggagta 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcat 68
||||||||||||||| |||||| ||||| || ||| ||| ||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
Score = 44.1 bits (22), Expect = 7e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| |||||||||||| |||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 79 gtaaatctatacaa 92
| |||||| ||||
Sbjct: 79 atgaatctagacaa 66
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 58.0 bits (29), Expect = 5e-08
Identities = 123/153 (80%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 79 gtaaatcta-tacaaatatgtgtctagatttattaacatatatataaatatgagcaatgc 137
| |||||| ||| | || ||| |||||| |||||||| |||| ||| || | |||||
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 138 tagaaagtcttgtattatgaaacggagggagta 170
||||| | ||| ||| ||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 122/153 (79%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 79 gtaaatctatacaaatatgtgt-ctagatttattaacatatatataaatatgagcaatgc 137
| |||||| ||| || | ||| ||||||| |||||||| |||| ||| || | |||||
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 138 tagaaagtcttgtattatgaaacggagggagta 170
||||| | ||| ||| ||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
|||| ||||||||| |||||| ||||| |||||||||| | ||||||||||| ||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||||||||||||||| | |||| ||||| || || ||| ||||||||||||| ||||
Sbjct: 2 atatacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatg 61
Query: 76 tta 78
|||
Sbjct: 62 tta 64
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| ||||| || |||| |||||||| |||||||||| | ||| |||||||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 162 gagggagta 170
|||||||||
Sbjct: 118 gagggagta 126
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 58.0 bits (29), Expect = 5e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| || || ||| || |||||||||||||||| ||
Sbjct: 82 atatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacat 23
Query: 153 tatgaaacggagggagtatat 173
| ||||||||||| |||||||
Sbjct: 22 tgtgaaacggaggaagtatat 2
Score = 58.0 bits (29), Expect = 5e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||||||||||||||| | |||| ||| |||| ||| ||| |||| |||||| ||||||
Sbjct: 2 atatacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatg 61
Query: 76 ttagtaaatctatacaaatat 96
||| | |||||| ||| ||||
Sbjct: 62 ttaatgaatctagacatatat 82
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 5e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||||||| |||| |||||| | |||||||||| | ||| ||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 158 aacggagggagta 170
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcat 68
||||||||||||||| |||||| ||||| || ||| ||| ||||||||||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
Score = 44.1 bits (22), Expect = 7e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 79 gtaaatctatacaa 92
| |||||| ||||
Sbjct: 65 atgaatctagacaa 78
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 58.0 bits (29), Expect = 5e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| |||||||| || | |||||||||| | ||| ||
Sbjct: 82 atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacat 23
Query: 153 tatgaaacggagggagtatat 173
| ||||||||||| |||||||
Sbjct: 22 tgtgaaacggaggaagtatat 2
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | ||| ||||| |||||||||| |||| |||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 79 gtaaatcta 87
| ||||||
Sbjct: 70 atgaatcta 62
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 58.0 bits (29), Expect = 5e-08
Identities = 74/88 (84%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 63 attcatatagatgttagtaaatctatacaaatat--gtgtctagatttattaacatatat 120
|||||||||||||| | | |||||| ||| |||| ||||||||||| |||||||| |||
Sbjct: 90 attcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctat 31
Query: 121 ataaatatgagcaatgctagaaagtctt 148
|| ||| || | |||||||||||||||
Sbjct: 30 atgaatgtgggtgatgctagaaagtctt 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 73/88 (82%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 63 attcatatagatgttagtaaatctatacaaatatgt--gtctagatttattaacatatat 120
|||||||||||||||| | |||||| ||| |||| | ||||||||| ||| |||| |||
Sbjct: 25 attcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctat 84
Query: 121 ataaatatgagcaatgctagaaagtctt 148
|| ||| || | |||||||||||||||
Sbjct: 85 atgaatgtgtgtgatgctagaaagtctt 112
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| |||||| | | |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 110 ttaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagt 169
||||||| ||||||||||||| ||||||| || | ||| |||| ||||||||||| |||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 170 atat 173
||||
Sbjct: 122 atat 125
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 110 ttaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagt 169
||||||| ||||||||||||| ||||||| || | ||| ||| |||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 170 a 170
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 94/114 (82%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 59 ccatattcatatagatgttagtaaatctatac--aaatatgtgtctagatttattaacat 116
|||||||||||| ||||||| | |||||| || | |||| | | |||||||||||||||
Sbjct: 45 ccatattcatattgatgttaatgaatctagacatatatatctatatagatttattaacat 104
Query: 117 atatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||| ||| |||||||||| | ||| ||| ||||||||||||||||
Sbjct: 105 caatataaatgtga--aatgctagaatgacttacattgtgaaacggagggagta 156
Score = 54.0 bits (27), Expect = 7e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 67 atatagatgttagtaaatctatacaaatatgt--gtctagatttattaacatatatataa 124
|||| ||||||| |||||||||| | |||| | ||||||||| |||||||| |||| |
Sbjct: 110 atattgatgttaataaatctatatagatatatatgtctagattcattaacatcaatatga 51
Query: 125 atatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||| | |||||| ||| | ||| ||| ||||||||||||||||
Sbjct: 50 atatgggaaatgcttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagtatatg 174
|||||||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 100 gcaatgctagaaagtcttacattgtgaaacggaggaagtatatg 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 catatacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagat 74
|||||||||||||||||| | |||| ||| |||| ||| |||| ||| |||||| |||||
Sbjct: 143 catatacttcctccgtttcacaatgtaagactttctagcattg-ccacattcatttagat 85
Query: 75 gttagtaaatcta 87
|||| | ||||||
Sbjct: 84 gttattgaatcta 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagtatatg 174
||||||||||||| ||| ||| ||||||||||| ||||||||
Sbjct: 43 caatgctagaaaggcttagattgtgaaacggaggaagtatatg 1
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 124/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| | |||| ||||| || ||| ||| |||| |||| ||| ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 78 agtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaat 135
| | | |||| || | |||| |||||||||| |||| ||| |||| ||||| |||
Sbjct: 64 aatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaat 123
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
||||||| | ||| |||| ||||||||||||||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 124/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| | |||| ||||| || ||| ||| |||| |||||||| || ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 78 agtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaat 135
| ||||| || || | |||| |||||||||| |||||||| |||| ||| || | |||
Sbjct: 64 aataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaat 123
Query: 136 gctagaaagtcttgtattatgaaacggagggagta 170
||||||| | ||| ||| ||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 25 ctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||||| |||||| ||||| || ||| ||| ||||||||||||| |||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 54 attgtccatattcatatagatgttagtaaatctatacaaatatgtgtctagatttattaa 113
|||| ||| ||||||||| |||||| | |||||| ||| |||| | ||||||| |||||
Sbjct: 6 attgcccacattcatatatatgttaatgaatctagacatatatat--ctagattcattaa 63
Query: 114 catatatataaatatgagcaatgctag 140
||||||||| ||| || ||||||||||
Sbjct: 64 catatatatgaatgtgggcaatgctag 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatg 136
|||| |||||||||| |||||||||||||| ||| || ||||||
Sbjct: 48 atatatgtctagattcattaacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagat 74
|||||||||||||| |||||| ||||| || ||| |||||| | ||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagat 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 99 gtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaa 158
||||||||| ||||| || ||||| ||||| ||||| ||||| | ||| ||||||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 159 acggagggagta 170
||||||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||||||| || ||||||||||||| ||||
Sbjct: 48 gcaatgctagaaagtcttataatatgaaacggaggaagta 87
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 94/114 (82%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 59 ccatattcatatagatgttagtaaatctatacaaatatgtgtcta--gatttattaacat 116
|||||||||||| ||||||| | |||||| ||| |||| | | || |||||||||||||
Sbjct: 116 ccatattcatattgatgttaatgaatctagacatatatatctatatagatttattaacat 57
Query: 117 atatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||| ||| |||||||||| | ||| ||| ||||||||||||||||
Sbjct: 56 caatataaatgtga--aatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 67 atatagatgttagtaaatctatacaaatatgt--gtctagatttattaacatatatataa 124
|||| ||||||| |||||||||| | |||| | ||||||||| |||||||| |||| |
Sbjct: 51 atattgatgttaataaatctatatagatatatatgtctagattcattaacatcaatatga 110
Query: 125 atatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||| | |||||| ||| | ||| ||| ||||||||||||||||
Sbjct: 111 atatgggaaatgcttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagtat 171
|||||||||| | ||| ||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| ||||||||||| | |||| ||||| | ||| ||| |||||
Sbjct: 87 tctagattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaa 146
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 147 cggagggagta 157
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||| ||| ||||||||||||| ||| |||||| | ||| |||| |||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 160 cggagggagta 170
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
|||||||||||||| | |||| ||||| || ||| ||| ||||||||||||| ||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || || |||| ||| |||||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 79 gtaaatctatac--aaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||| || || | |||| | |||||||| |||||||| |||| ||| || | ||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | ||| ||||| |||||| ||| ||| |||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | |||| |||||||||| |||||||| |||| ||| || | ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||| || | ||| ||| ||||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 79 gtaaatctatacaaatatgtgt--ctagatttattaacatatatataaatatgagcaatg 136
| |||||| ||| |||| | | ||||||| |||||||| |||| ||| || | ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||| || | ||| |||| ||||||||||| ||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| |||||| ||| ||| |||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| ||| | |||| |||||||||| |||||||| |||| ||| || ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| ||| |||| |||||||||| | ||| |||| |||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 160 cggagggagta 170
|||||| ||||
Sbjct: 117 cggaggaagta 127
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| ||| ||||| |||| ||| |||| |||||||||| | ||| ||| |||
Sbjct: 66 tgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtga 125
Query: 158 aacggaggga 167
||||||||||
Sbjct: 126 aacggaggga 135
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||| ||| ||||||||||||| ||||||| || | ||| ||| |||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtga 18
Query: 158 aacggagggagtat 171
|||||||| |||||
Sbjct: 17 aacggaggaagtat 4
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||||||||||| | |||| ||||| || ||| ||| ||||||||||||| |||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 121 ataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
|||||| ||| ||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 54 ataaatgtgaacaatgctagaaagtcttacattatgaaatggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagtatat 173
|||||||||||||||||| ||| ||||||||| | |||||||
Sbjct: 87 gcaatgctagaaagtcttacattgtgaaacggatgaagtatat 129
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| ||||||| |||||||| || | |||||||||| | ||| ||
Sbjct: 82 atatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacat 23
Query: 153 tatgaaacggagggagta 170
| ||||||||||||||||
Sbjct: 22 tgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || || |||||| || || ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | |||| |||||||||| ||| ||| |||| ||| || ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtatat 173
|||||| | ||| |||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtatat 2
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||| ||||||||| || ||||||||||||||||||
Sbjct: 93 aatgcttgaaagtcttatagtatgaaacggagggagta 130
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||| ||| |||||||||||| ||| |||||| | ||| ||| |||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 160 cggagggagtatat 173
||||||||||||||
Sbjct: 15 cggagggagtatat 2
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| |||||| ||||| || ||||||| | || || ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 79 gtaaatctatacaaatatgt--gtctagatttattaacatatatataaatatgagcaatg 136
| |||||| | |||||| | ||||||||| ||| ||| |||| ||| || ||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtatat 173
|||||| | ||| |||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtatat 2
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
||||||| |||||||| || ||||||||||||||||||
Sbjct: 42 aatgctataaagtcttataatatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||||||||| || ||||||||||||| ||||
Sbjct: 77 aatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 116 tatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtatat 173
||||||||||| || | |||||||||| | ||| ||| |||||||||||||||||||
Sbjct: 59 tatatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | || | ||||| |||||| ||| ||| ||| |||| |||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 79 gtaaatct--atacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| ||||| ||| |||||| |||||||||| || ||||| |||||||| || | ||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagtatat 173
| | || | ||| || |||||||||||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagtatat 2
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 atatacttcctccgttttataatgcaagtctttttagtatt 56
||||||||||||||||| | |||||||||| || |||||||
Sbjct: 111 atatacttcctccgtttcacaatgcaagtcattctagtatt 71
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 124/156 (79%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||| ||||||||| | |||| ||||| || || ||| || ||||||||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 78 agtaaatctata--caaatatgtgtctagatttattaacatatatataaatatgagcaat 135
| | |||||||| || |||| ||| || ||| |||| ||| ||||| ||| || |||
Sbjct: 64 aatgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaat 123
Query: 136 gctagaaagtcttgtattatgaaacggagggagtat 171
||||||| | ||| ||| |||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtat 159
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
||||| ||||||||| | |||| ||||| || ||| ||| |||| |||||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatg 102
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 106/132 (80%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 41 aagtctttttagtattgtccatattcatatagatgttagtaaatcta--tacaaatatgt 98
||||| || ||||||| ||||||||||||| |||| || | ||| || || | |||| |
Sbjct: 27 aagtcattctagtattttccatattcatattgatgctaatgaatttagatagatatatat 86
Query: 99 gtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaa 158
|| |||||| |||| ||| |||| |||||||| |||| ||||| | ||| |||| || |
Sbjct: 87 gtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtgga 146
Query: 159 acggagggagta 170
||||||||||||
Sbjct: 147 acggagggagta 158
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatg 75
|||| ||||||||| |||||| ||||| || ||||||| |||||||||||| ||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatg 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 99 gtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaa 158
||||||||| |||| ||| |||| |||||| | ||| |||||| | ||| ||||||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 159 acggagggagta 170
||||||||||||
Sbjct: 125 acggagggagta 136
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| ||||| ||| || | |||||||||| | ||| ||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 162 gagggagta 170
|||||||||
Sbjct: 13 gagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 79 gtaaatctata 89
| ||||||||
Sbjct: 65 atgaatctata 75
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 99 gtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaa 158
||||||||| |||||||| ||||| || || |||||||||||| | || ||||||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 159 acggagggagtat 171
|| ||||||||||
Sbjct: 121 acagagggagtat 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatataga 73
|||||||||||||| |||||| ||||| || ||| ||| |||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatataga 59
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 118 tatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagta 170
||||| ||| || ||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 68 tatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 121/153 (79%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| | | || |||| ||||| |||||||| ||||||| || | ||||||
Sbjct: 65 atgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgct 124
Query: 139 agaaagtcttgtattatgaaacggagggagtat 171
|||| | ||| |||| ||||||||||| |||||
Sbjct: 125 agaatgacttatattgtgaaacggaggaagtat 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| ||| || | |||||||||| | ||| ||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| ||| |||| |||| ||| || | |||||||||| | ||| |||||||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatga 139
Query: 158 aacggagggagta 170
|||||||||||||
Sbjct: 140 aacggagggagta 152
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| ||| || | |||| ||||| | ||| |||| |||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 160 cggagggagtata 172
|||||||||||||
Sbjct: 125 cggagggagtata 137
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 119 atataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtat 171
||||||||||| |||||||||| | ||| |||||||||| |||||||||||
Sbjct: 88 atataaatatggaaaatgctagaatgacttatattatgaaatggagggagtat 140
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| |||||||| |||| ||| || | |||||||||| | ||| |||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 162 gagggagta 170
|||||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagtatat 173
|||||||||| | ||| |||| |||||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagtatat 173
|||||||||| | ||| |||| |||||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| |||||||||||||||| ||||| || || ||| |||| |||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 79 gtaaatcta 87
|| ||||||
Sbjct: 78 gtgaatcta 70
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| ||||||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 79 gtaaatcta 87
| ||||||
Sbjct: 74 atgaatcta 66
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtc 146
||||||||||||| |||||||| |||| ||| || |||||| |||||||||
Sbjct: 61 atgtgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtc 146
|||||||| |||||||| |||| ||| || ||||||||||||||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| |||||| ||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Score = 44.1 bits (22), Expect = 7e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| ||||||||| |||||||| |||| ||| || | |||||||||| | ||| ||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 153 tatgaaacggagggagta 170
||||||||||||| ||||
Sbjct: 112 tatgaaacggaggaagta 129
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa
Indica Group
Length = 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
||||||||||||||||||||| ||| |||| || | | |||| |||||| |||||||||
Sbjct: 5 tacttcctccgttttataatgtaagactttctaacactttccacattcatctagatgtta 64
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 102 tagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacg 161
|||||| ||||| || ||||||||||| |||||||||| | ||| ||| |||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 162 gagggagtatat 173
||||||||||||
Sbjct: 138 gagggagtatat 149
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||| |||||| ||| |||| |||||||||| | ||| ||| |||||
Sbjct: 88 tctagattcattaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaa 147
Query: 160 cggagggagtat 171
|||||| |||||
Sbjct: 148 cggaggaagtat 159
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 115 atatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtatatg 174
|||||||| |||||||| ||||||| | | ||| ||| ||||||||||||||||||||
Sbjct: 60 atatatatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagtatatg 1
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcata 69
||||||||||||||| | |||| ||||| || ||||||| |||| |||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatat 70
|||||||||||||| | |||| ||||| |||||||||| ||| ||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatat 58
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| ||| |||||||| ||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 79 gtaaatctatacaaat 94
|||||||| ||||||
Sbjct: 84 ataaatctagacaaat 69
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 90/111 (81%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 63 attcatatagatgttagtaaatctatacaa--atatgtgtctagatttattaacatatat 120
|||||||||||||||| | |||||| ||| |||| | | |||||| || ||||| |||
Sbjct: 49 attcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatctat 108
Query: 121 ataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtat 171
|| ||| || | |||||||||| | ||| ||| |||||||||||||||||
Sbjct: 109 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| |||||| ||| ||| |||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||||||||| || ||| ||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| ||||| ||| |||| ||| || | |||||||||| | ||| ||
Sbjct: 58 atatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacat 117
Query: 153 tatgaaacggagggagtata 172
| ||||||||||| ||||||
Sbjct: 118 tgtgaaacggaggaagtata 137
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| ||||| || |||| ||| || | |||||||||| | ||| |||| |||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 147
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| ||| | | |||||||||| | ||| |||||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 113 cggagggagta 123
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| ||||| || |||| ||| || | ||| |||||| ||||| ||
Sbjct: 81 atatatgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacat 140
Query: 153 tatgaaacggagggagtat 171
| |||||||||||||||||
Sbjct: 141 tgtgaaacggagggagtat 159
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||| ||| |||| ||| || | |||||||||| | ||| |||| |||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 122 cggagggagta 132
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 43 caatgctagaaagccttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 24 cctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
||||||||| | |||| ||| |||| |||||||||||| ||| || |||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgtta 59
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| ||| |||| |||| ||| |||| |||||||||| | ||| ||
Sbjct: 81 atatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacat 140
Query: 153 tatgaaacggaggga 167
| |||||||||||||
Sbjct: 141 tgtgaaacggaggga 155
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||||||| |||| ||| || | |||||||||| | ||| ||| |||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 138
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 139 cggagggagta 149
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || ||||||| | || |||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | |||| |||||||||| ||||| || |||| ||| || | ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
||||| | ||| ||| ||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| |||| ||| |||| ||| || | |||||||||| | ||| |||| |||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||| ||||||||| || |||||||| || | |||||||||| | ||| ||| |||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 132 caatgctagaaagtcttgtattatgaaacggagggagta 170
||||||||||||||||| ||| |||||||||| |||||
Sbjct: 56 caatgctagaaagtcttacattgtgaaacggagagagta 94
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 120/152 (78%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||||||||||||| | |||| ||||| || ||| ||| ||| |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 79 gtaaatctatacaaatatgtgtctagatttattaacatatatataaatatgagcaatgct 138
| |||||| | ||| |||||||||| |||| ||| |||| ||| | | ||||||
Sbjct: 65 atgaatctaga----tatatgtctagattcattagcatcaatatgaatgtaggaaatgct 120
Query: 139 agaaagtcttgtattatgaaacggagggagta 170
|||| | ||| |||| ||||||||||||||||
Sbjct: 121 agaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 125 atatgagcaatgctagaaagtcttgtattatgaaacggaggga 167
||||||| |||||||||| | ||| |||| |||||||||||||
Sbjct: 50 atatgagaaatgctagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtta 78
|||| ||||||||| | |||| ||||| || || ||| |||| |||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 79 gtaaatcta--tacaaatatgtgtctagatttattaacatatatataaatatgagcaatg 136
| |||||| || | |||| |||||||||| |||||||| ||| ||| || | ||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 137 ctagaaagtcttgtattatgaaacggagggagta 170
|||||| | ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| ||||| || |||| ||| |||| |||||||||| | ||| ||| |||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 160 cggagggagta 170
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
||||||||||||||| | |||| ||||| || ||| ||| |||||||||||| |||||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 85
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| |||| ||||||||||||||||
Sbjct: 103 aatgctagaatgacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | |||| ||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagtatatg 174
|||||||||| | ||| ||||||||||| |||| ||||||||
Sbjct: 42 aatgctagaatgacttatattatgaaacagaggaagtatatg 1
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 91 aatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 98 aatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 101 aatgctagaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagtatatg 174
|||||||||| | ||| ||| ||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagtatatg 1
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 44.1 bits (22), Expect = 7e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| |||| ||| || | |||||||||| | ||| ||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 153 tatgaaacggagggagta 170
| ||||||||||| ||||
Sbjct: 22 tgtgaaacggaggtagta 5
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| |||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 19 tacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgt 76
|||||||||||||| | |||| ||||| || ||| ||| |||| |||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 7e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatatagatgtt 77
||||||||||||||| |||||| ||||| || ||| ||| ||| |||||||| ||| ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 78 agtaaatcta 87
| | ||||||
Sbjct: 56 aatgaatcta 47
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 18 atacttcctccgttttataatgcaagtctttttagtattgtccatattcatata 71
||||| ||||||||| | |||| ||||| || ||| ||| ||||||||||||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattttccatattcatata 78
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 tcttgtattatgaaacggagggagta 170
|||| |||||||||||||||||||||
Sbjct: 112 tcttatattatgaaacggagggagta 137
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 44.1 bits (22), Expect = 7e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||| |||||||||| |||||||| ||| ||| || | |||||||||| | ||| ||
Sbjct: 85 atatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacat 144
Query: 153 tatgaaacggagggagta 170
| ||||||||||||||||
Sbjct: 145 tgtgaaacggagggagta 162
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 120 tataaatatgagcaatgctagaaagtcttgtattatgaaacggagggagtatat 173
||||||| || | |||||||||| | ||| ||| |||||||||||||||||||
Sbjct: 71 tataaatgtgggaaatgctagaatgacttagattgtgaaacggagggagtatat 124
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 109 attaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaacggagggag 168
|||||||| |||||||| |||| |||||||||| | ||| ||| ||||||||||| ||
Sbjct: 66 attaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 169 ta 170
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 7e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 98 tgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||| |||| ||| ||||||||||| | ||||||| || | ||| ||| ||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtgg 18
Query: 158 aacggagggagtat 171
||||||||||||||
Sbjct: 17 aacggagggagtat 4
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 133 aatgctagaaagtcttgtattatgaaacggagggagta 170
|||||||||| | ||| |||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattgtgaaacggagggagta 5
