miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;ABRL01001255.1/9350-9110 65489:Oryza barthii
Length = 241
Score = 355 bits (179), Expect = 2e-97
Identities = 218/233 (93%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 6 ccctccgtattttaatgtatgacgccattgactttttaacaaatgtttgacctttcgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 66 tattaaaaaaattatgtaattatcatttattttattgtgacttgatttatcatcaaatgt 125
Query: 124 tct-ttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||| ||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 126 tctattaagcatgacataagtatttttgcatttgcataaaaaaattgaataagacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||| | |||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 69 aataagacgaaaggtcaaacatttgttaaaaagtcaatggcgtcatacattaaaatacgg 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 236 ccctccgtattttaatgtatgacgccgttgactttttaaccaacgtttg 188
>RF01058;MIR806;AB426870.1/1028-787 39946:Oryza sativa Indica Group
Length = 242
Score = 283 bits (143), Expect = 5e-76
Identities = 211/235 (89%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||
Sbjct: 6 ccctccgtattttaatgtatgacgacattgactttttaacaaacgtttgactttttgtct 65
Query: 64 tatt---aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaa 120
|||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 66 tatttaaaaaaaaattatgtaattatcatttattttattgtgacttgatttatcatcaaa 125
Query: 121 tgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaa 180
|||||||||||||||||||||||| ||||| |||||||| |||||||| | ||
Sbjct: 126 tgttctttaagcatgacataagta-ttttgtatttgcataaaaaatttgaataaaacaaa 184
Query: 181 tgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 185 tggtcaaatgttggttaaaaagtcaacggcgtcatacattaaaatatggagggag 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| ||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 55 tcaaacgtttgttaaaaagtcaatgtcgtcatacattaaaatacggagggag 4
Score = 67.9 bits (34), Expect = 6e-11
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||||||||||||| ||||||||||||| | | |||| || ||||| |
Sbjct: 237 ccctccatattttaatgtatgacgccgttgactttttaaccaacatttgaccatttgttt 178
Query: 64 tatt 67
||||
Sbjct: 177 tatt 174
>RF01058;MIR806;AACV01014960.1/1082-1322 39947:Oryza sativa Japonica
Group
Length = 241
Score = 268 bits (135), Expect = 3e-71
Identities = 207/233 (88%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||| || | |||||||||||| |||||| ||||| ||||
Sbjct: 6 ccctccgtattttaatgtatgaatccgtatactttttaacaaacgtttgacctttcgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 66 tattaaaaaaaatatataattatcatttattttattgtgacttgatttatcatcaaatat 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcat-nnnnnnnttgaataagatgaatg 182
|||||||||||||||||||||||||| |||||||| |||||||||| |||||
Sbjct: 126 tctttaagcatgacataagtatttttatatttgcataaaaaaatttgaataagacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 186 gtcaaacgttggttaaaaagtcaacggcgtcatatattaaaatacggagggag 238
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||| ||||||||| ||||||||||||| | |||||| || || ||||
Sbjct: 236 ccctccgtattttaatatatgacgccgttgactttttaaccaacgtttgaccattcgtct 177
Query: 64 tatt 67
||||
Sbjct: 176 tatt 173
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||| | ||||||||| |||||||||| |||| ||||||||||||||||||
Sbjct: 69 aataagacgaaaggtcaaacgtttgttaaaaagtatacggattcatacattaaaatacgg 10
Query: 230 aggga 234
|||||
Sbjct: 9 aggga 5
>RF01058;MIR806;AAAA02027128.1/9964-10206 39946:Oryza sativa Indica
Group
Length = 243
Score = 260 bits (131), Expect = 8e-69
Identities = 197/221 (89%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 16 taatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaaca-aaa 74
|||||||||||||| |||||||||| |||| | |||| ||||| |||| ||| | | |||
Sbjct: 20 taatgtatgacgccgttgactttttgacaaacatttgacctttcgtctaattcaaagaaa 79
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 80 ttatgtaattatcatttattttattgtgacttgatttatcatcaaatattctttaagcat 139
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|||||||||||||||| |||||||| |||||||||| ||||| | ||||||||
Sbjct: 140 gacataagtatttttgtatttgcataaaaaatttgaataagacgaatggttaaacgttga 199
Query: 195 ttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttaaaaagtcaacggcgtcatacattaaaatacggagggag 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 238 ccctccgtattttaatgtatgacgccgttgactttttaa 200
Score = 54.0 bits (27), Expect = 9e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacatta 221
|||||| ||| ||| | ||||| ||| || |||||||||||||||||||||||||
Sbjct: 74 ttgaattagacgaaaggtcaaatgtttgtcaaaaagtcaacggcgtcatacatta 20
>RF01058;MIR806;AAAA02037128.1/6053-6294 39946:Oryza sativa Indica
Group
Length = 242
Score = 258 bits (130), Expect = 3e-68
Identities = 193/216 (89%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 10 gtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaa 69
|||||||||||||||||||| |||||||||||| || |||| ||||| |||||||| |
Sbjct: 14 gtattttaatgtatgacgccgttgactttttaataaatatttgacctttcgtcttattta 73
Query: 70 caaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttt 128
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 74 aaaaatttatgtaattatcatttattttattgtgacttgatttatcatcaaatgttcttt 133
Query: 129 aagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaa 188
|| ||||||||||||||||||| |||||||| |||||||||| ||||| |||||
Sbjct: 134 aaacatgacataagtatttttgtatttgcataaaaaatttgaataagacgaatggtcaaa 193
Query: 189 cgttggttaaaaagtcaacggcgtcatacattaaaa 224
|||||||||||||||||||| |||||||||||||||
Sbjct: 194 cgttggttaaaaagtcaacgacgtcatacattaaaa 229
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 195 ttaaaaagtcaacggcgtcatacattaaaatac 227
|||||||||||||||||||||||||||||||||
Sbjct: 46 ttaaaaagtcaacggcgtcatacattaaaatac 14
Score = 58.0 bits (29), Expect = 6e-08
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 13 ttttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt 67
||||||||||||||| | ||||||||||||| | |||||| || || ||||||||
Sbjct: 229 ttttaatgtatgacgtcgttgactttttaaccaacgtttgaccattcgtcttatt 175
>RF01058;MIR806;AP008209.1/28671176-28671416 39947:Oryza sativa
Japonica Group
Length = 241
Score = 254 bits (128), Expect = 5e-67
Identities = 200/226 (88%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 7 tccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttat 66
||||||||||||||||| ||||| || || ||||||||| ||||| ||||| || ||||
Sbjct: 9 tccgtattttaatgtataacgccgtttaccttttaacaaacgttttacctttcgttttat 68
Query: 67 taacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
| | |||||| ||||||||||| ||||||||| ||| |||||||||||||| |||| |||
Sbjct: 69 tcaaaaaatttatgtaattatcctttattttactgtgacttgatttatcattaaatattc 128
Query: 126 tttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatc 185
||||||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 129 tttaagcatgacataagtatttttgtatttgcataaaaaatttgaataagacgaatgatc 188
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 234
Score = 71.9 bits (36), Expect = 4e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 234 ctccgtattttaatgtatgacgccgttgactttttaaccaacgtttg 188
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
||||||| ||||||| || |||||||| |||||||||||||||||
Sbjct: 53 aaacgtttgttaaaaggtaaacggcgttatacattaaaatacgga 9
>RF01058;MIR806;AC120983.6/37375-37615 39947:Oryza sativa Japonica
Group
Length = 241
Score = 254 bits (128), Expect = 5e-67
Identities = 185/206 (89%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 31 ttgactttttaacaancgtttgnccttttgtcttatt-aacaaaattatgtaattatcat 89
|||||||||||| || |||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 33 ttgactttttaataaacgtttgaccttttgtcttattcaataaaattatgtaattatcat 92
Query: 90 ttattttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 93 ttattttattgtgacttaatttataatcaaatgttctttaagcatgacataagtattttt 152
Query: 150 gcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtcaacgg 209
| |||| ||| |||||||||| ||||| | ||||||||||||||||||||||||
Sbjct: 153 gtatttacataaaaaatttgaataagacgaatggttaaacgttggttaaaaagtcaacgg 212
Query: 210 cgtcatacattaaaatacggagggag 235
|||||||||||||||||||||||||
Sbjct: 213 tgtcatacattaaaatacggagggag 238
Score = 67.9 bits (34), Expect = 6e-11
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||||| || ||||||||||||| | ||||| || || ||||
Sbjct: 236 ccctccgtattttaatgtatgacaccgttgactttttaaccaacgtttaaccattcgtct 177
Query: 64 tatt 67
||||
Sbjct: 176 tatt 173
>RF01058;MIR806;AACV01008167.1/7413-7657 39947:Oryza sativa Japonica
Group
Length = 245
Score = 242 bits (122), Expect = 2e-63
Identities = 207/237 (87%), Gaps = 5/237 (2%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||
Sbjct: 6 ccctccgtattttaatgtatgacgccgttgactttttaacaaacgtttaacctttcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 66 tatttaaaaaatttatgtaattatcatttattttattgtgacttgatttatcatcaaatg 125
Query: 123 ttctttaa----gcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatg 178
|||||||| |||||||||||||||||| |||||||| |||||||||| |
Sbjct: 126 ttctttaagcatgcatgacataagtattttcatatttgcataaaaaatttgaataagacg 185
Query: 179 aatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||| |||||||||||||||||||| |||||| | |||||||||||||||||||||
Sbjct: 186 aattgtcaaacgttggttaaaaagtaaacggcaccctacattaaaatacggagggag 242
Score = 91.7 bits (46), Expect = 4e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aaacgtttgttaaaaagtcaacggcgtcatacattaaaatacggagggag 4
Score = 44.1 bits (22), Expect = 9e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||| | ||| || |||||||||| | ||||||
Sbjct: 240 ccctccgtattttaatgtagggtgccgtttactttttaaccaacgtttg 192
>RF01058;MIR806;AAAA02030603.1/128190-128430 39946:Oryza sativa
Indica Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 203/233 (87%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||| |||||||| |||| ||||| | || |||||| | ||| ||||
Sbjct: 6 ccctccgtattttaatggatgacgccgttgattttttgataaacgtttgacatttcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | || ||| ||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 66 tattcaaaatatttatgtaattatcatttattttattgtggcttcatttatcatcaaata 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||| |||||||||||||||||| |||||||| ||||||||||| |||
Sbjct: 126 ttctttaaacatgacataagtatttttatatttgcataaaaaaattgaataagataaata 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gtcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 238
Score = 75.8 bits (38), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 236 ccctccgtattttaatgtatgacgccgttgactttttaaccaacgtttg 188
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| ||||||||| | ||||| ||||||||||||| ||||||||||
Sbjct: 72 ttgaataagacgaaatgtcaaacgtttatcaaaaaatcaacggcgtcatccattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
>RF01058;MIR806;AP008215.1/4511892-4511652 39947:Oryza sativa
Japonica Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 203/233 (87%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||||||||||||| |||||||||| |||| |||||| ||||| ||||
Sbjct: 6 ccctccatattttaatgtatgacgccgttgactttttgacaaacgtttgacctttcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| |||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 66 tattcaaaaaatttatgtaattataatttattttattgtgacttgatttatcatcaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||| |||||||| |||||||||||| ||||| | |||||||||| || ||
Sbjct: 126 ttcttcaagcatgaaataagtatttttatatttgtacaaaaattttgaataagacgagtg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||| ||| ||||||| |||||||||||||||||||||||||
Sbjct: 186 gtcaaacgttggttataaaatcaacggtgtcatacattaaaatacggagggag 238
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| | ||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaaaggtcaaacgtttgtcaaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggagggag 235
||||||||
Sbjct: 12 tggagggag 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||||||| || |||| ||| |||| | ||||||
Sbjct: 236 ccctccgtattttaatgtatgacaccgttgattttataaccaacgtttg 188
>RF01058;MIR806;AACV01015483.1/3474-3710 39947:Oryza sativa Japonica
Group
Length = 237
Score = 232 bits (117), Expect = 2e-60
Identities = 189/215 (87%), Gaps = 1/215 (0%)
Strand = Plus / Plus
Query: 14 tttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaacaaa 73
|||||| ||||||||| |||| ||||||| || |||||| ||||| |||||||| | |||
Sbjct: 12 tttaatatatgacgccgttgattttttaataaacgtttgacctttcgtcttattcaaaaa 71
Query: 74 att-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagc 132
||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||| |||
Sbjct: 72 atttatgtaattatcatttattttactgtgacttgatttatcatctaatgttctttgagc 131
Query: 133 atgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgtt 192
|||| ||||||||||||| |||||||| |||||||||| ||||| |||||||||
Sbjct: 132 atgatataagtatttttgtatttgcataaaaaatttgaataagacgaatggtcaaacgtt 191
Query: 193 ggttaaaaagtcaacggcgtcatacattaaaatac 227
||||||||||||||||||||||||||||||||||
Sbjct: 192 agttaaaaagtcaacggcgtcatacattaaaatac 226
Score = 71.9 bits (36), Expect = 4e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 10 gtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt 67
|||||||||||||||||||| ||||||||||||| | |||||| || || ||||||||
Sbjct: 226 gtattttaatgtatgacgccgttgactttttaactaacgtttgaccattcgtcttatt 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaa 223
|||||||||| ||| | ||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 68 ttgaataagacgaaaggtcaaacgtttattaaaaaatcaacggcgtcatatattaaa 12
>RF01058;MIR806;AAAA02034880.1/6219-6459 39946:Oryza sativa Indica
Group
Length = 241
Score = 228 bits (115), Expect = 3e-59
Identities = 202/233 (86%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||| |||||||| |||||||||| |||| |||||| ||||| | |
Sbjct: 6 ccctccgtattttaatatatgacgcagttgactttttgacaaacgtttgacctttcatat 65
Query: 64 tatt-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| || |||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 66 tattcaaaaaaattatataattatcatttattttattgtgacttgatttatcatcaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||| ||| |||||||||||||| |||||||| ||||||||| |||||
Sbjct: 126 ttctttaaacataacataagtatttttatatttgcataaaaaatttgaataaggcgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 186 gtcaaacgttggttaaaatgttaaatgcgtcatacattaaaatacggagggag 238
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| ||||| | ||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 72 ttgaataatatgaaaggtcaaacgtttgtcaaaaagtcaactgcgtcatatattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||||||||| || || ||||||| | ||||||
Sbjct: 236 ccctccgtattttaatgtatgacgcatttaacattttaaccaacgtttg 188
>RF01058;MIR806;AACV01018413.1/13715-13474 39947:Oryza sativa
Japonica Group
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 203/233 (87%), Gaps = 6/233 (2%)
Strand = Plus / Plus
Query: 7 tccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttat 66
||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||
Sbjct: 9 tccgtattttaatgtatgacgccattgactttttaacaaacgtttgacctttcgtcttat 68
Query: 67 taacaaaa--ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgtt 124
| | |||| ||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 69 tcaaaaaaatttatgtaattatcatttattttattgtgatttaatttatcatcaaatgtt 128
Query: 125 ctttaagcatgacataagtatttttgcatttgcat--nnnnnnnttgaataagatgaatg 182
||||||||||||| ||| ||||||| |||| ||| |||||||||| |||||
Sbjct: 129 ctttaagcatgac--aagcatttttgtatttacataaaaaaaaattgaataagacgaatg 186
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| ||||||||||||||||| |||||||| |||||||||| |||||||
Sbjct: 187 gtcaaacattggttaaaaagtcaacagcgtcatatattaaaatacagagggag 239
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 72 ttgaataagacgaaaggtcaaacgtttgttaaaaagtcaatggcgtcatacattaaaata 13
Query: 227 cggagggag 235
|||| ||||
Sbjct: 12 cggatggag 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||| |||||||||| |||||||| ||||||||||||| | ||||| || || ||||
Sbjct: 237 ccctctgtattttaatatatgacgctgttgactttttaaccaatgtttgaccattcgtct 178
Query: 64 tatt 67
||||
Sbjct: 177 tatt 174
>RF01058;MIR806;AAAA02041175.1/180-424 39946:Oryza sativa Indica
Group
Length = 245
Score = 222 bits (112), Expect = 2e-57
Identities = 197/226 (87%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| |||||||||| | || |||||| ||||| |||||||| |
Sbjct: 16 tattttaatgtatgacgccgttgacttttttataaacgtttgacctttcgtcttattcaa 75
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| ||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 76 aaaatttatgcaattatcatttgttttattgtgacttaatttatcatcaaatgttcttta 135
Query: 130 agcatgacataagtatttttgcatttgcat-nnnnnnnttgaataagatgaatgatcaaa 188
|||||| |||||||||||| | ||| |||| |||||||||| ||||| |||||
Sbjct: 136 agcatggcataagtattttggtattcgcataaaaaaatttgaataagacgaatggtcaaa 195
Query: 189 cgttggttaaaaagtcaacggcgtcatacattaaaatacggaggga 234
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tgttgattaaaaagtcaacggcgtcatacattaaaatacggaggga 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| | ||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 75 ttgaataagacgaaaggtcaaacgtttataaaaaagtcaacggcgtcatacattaaaata 16
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 ccctccgtattttaatgtatgacgccgttgactttttaa 202
>RF01058;MIR806;AP006186.3/91205-91448 39947:Oryza sativa Japonica
Group
Length = 244
Score = 222 bits (112), Expect = 2e-57
Identities = 200/229 (87%), Gaps = 4/229 (1%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| ||||||||||||||| |||||| | |||||| ||||| |
Sbjct: 13 tattttaatgtatgacgccgttgactttttaacaaacgtttgactttttgttttatttaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttc-ttt 128
|||||| || |||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 73 aaaatttatataattatcatttattttattgtgacttgatttatcatcaaatgttctttt 132
Query: 129 aagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaa 188
||||||||||||| |||||||| |||||||| |||||||| || || | |||||
Sbjct: 133 aagcatgacataaatatttttgtatttgcataaaaaatttgaataaaatcaaaggtcaaa 192
Query: 189 cgttggttaaaaagtcaacggcgtcatac--attaaaatacggagggag 235
| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 193 cattggttaaaaagtcaacggcgtcgtacgtatttaaatacggagggag 241
Score = 77.8 bits (39), Expect = 6e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 55 tcaaacgtttgttaaaaagtcaacggcgtcatacattaaaata 13
>RF01058;MIR806;AP008216.1/20665850-20665611 39947:Oryza sativa
Japonica Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 193/223 (86%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 14 tttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaacaaa 73
|||||||||||||||| ||||||||||| | | |||||| || ||||||||||| | |||
Sbjct: 15 tttaatgtatgacgccgttgactttttatccaacgtttgaccatttgtcttatttaaaaa 74
Query: 74 att-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagc 132
||| ||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||
Sbjct: 75 atttatgtaattatcatttatttcattgtgacttaattcatcatcaaatgttctttaagc 134
Query: 133 atgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgtt 192
||||||||| |||||| ||||||| |||||||| | ||||| |||||||||
Sbjct: 135 atgacataaatattttcatatttgcacaaaaaaattgaataaaacgaatggtcaaacgtt 194
Query: 193 ggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 195 ggtaaaaaagtcaacggcgacatacattaaaatacggagggag 237
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaa 223
||||||| |||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 68 aataagacaaatggtcaaacgttggataaaaagtcaacggcgtcatacattaaa 15
Score = 60.0 bits (30), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||||| |||| |||||||||| || | ||||||
Sbjct: 235 ccctccgtattttaatgtatgtcgccgttgacttttttaccaacgtttg 187
>RF01058;MIR806;AC078891.2/107901-108140 39947:Oryza sativa Japonica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 198/231 (85%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||| ||| ||||||||||| | | ||||| | || || ||
Sbjct: 7 cctccatattttaatgtatgaagccgttgactttttatccaacgtttaactattcgtttt 66
Query: 65 attaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgtt 124
||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct: 67 attaaaaaaattatgtaattattatttattttattgtgacttgattcatcatcaaatgtt 126
Query: 125 ctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgat 184
||||||||||||||||| |||||| ||||||| |||||||| | |||||||
Sbjct: 127 ctttaagcatgacataaatattttcatatttgcacaaaatttttgaataaaacgaatgat 186
Query: 185 caaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||| || |||||||||||||||||||||||||||||| ||||||||
Sbjct: 187 caaacgttagtcaaaaagtcaacggcgtcatacattaaaatatggagggag 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct: 53 aaacgttggataaaaagtcaacggcttcatacattaaaatatggagg 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||| ||||||||||||||||||| |||||||||| || | ||||||
Sbjct: 235 ccctccatattttaatgtatgacgccgttgactttttgactaacgtttg 187
>RF01058;MIR806;AAAA02005296.1/10586-10340 39946:Oryza sativa Indica
Group
Length = 247
Score = 214 bits (108), Expect = 4e-55
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||| ||||||||||||||||| ||||||||||||| | |||||| || || ||||
Sbjct: 6 ccctctgtattttaatgtatgacaccattgactttttgatcgacgtttgaccattcgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||| |
Sbjct: 66 tattaaaaaaattatgtcattatcatttattttattatgacttgatttatcatcaaatat 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||||||||| ||||||| ||||||| |||||||| | ||||
Sbjct: 126 tctttaagcatgacataaatatttttatatttgcacaaaaattttgaataaaacgaatag 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaat 225
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 186 tcaaacgttggttaaaaagtcgacggcgtcatacattaaaat 227
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||||| | | |||||||||| || ||||||||||||||||| |
Sbjct: 69 aataagacgaatggtcaaacgtcgatcaaaaagtcaatggtgtcatacattaaaatacag 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 12 attttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||| | ||||||||||| | ||||||
Sbjct: 227 attttaatgtatgacgccgtcgactttttaaccaacgtttg 187
>RF01058;MIR806;AACV01000135.1/781-539 39947:Oryza sativa Japonica
Group
Length = 243
Score = 214 bits (108), Expect = 4e-55
Identities = 203/237 (85%), Gaps = 2/237 (0%)
Strand = Plus / Plus
Query: 1 ctcccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttg 60
||||| ||||||||| ||||||||| ||| |||||||||||| | ||||| || || |
Sbjct: 4 ctcccttccgtatttaaatgtatgatgccgttgactttttaatcaatgtttgaccattcg 63
Query: 61 tcttatt--aacaaaattatgtaattatcatttattttattgtnacttgatttatcatca 118
||||||| || |||||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 64 tcttattcaaaaaaaattatgtaattataatttattttattatgacttgatttatcatca 123
Query: 119 aatgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatg 178
|||||| |||||||||||||||||||||||| |||||||| ||||| |||| |
Sbjct: 124 aatgttttttaagcatgacataagtatttttatatttgcataaaatttttgaaaaagacg 183
Query: 179 aatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 184 agtagtcaaacgttggttaaaaagtcaacgacgtcatacattaaaatatggagggag 240
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| |||||| ||| |||||||||||||||| ||||||||| |||||
Sbjct: 73 ttgaataagacgaatggtcaaacattgattaaaaagtcaacggcatcatacatttaaata 14
Query: 227 cgga 230
||||
Sbjct: 13 cgga 10
Score = 60.0 bits (30), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||| ||||||||||||||||| | ||||||||||||| | ||||||
Sbjct: 238 ccctccatattttaatgtatgacgtcgttgactttttaaccaacgtttg 190
>RF01058;MIR806;AP005531.3/80746-80987 39947:Oryza sativa Japonica
Group
Length = 242
Score = 214 bits (108), Expect = 4e-55
Identities = 202/234 (86%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||| |||||||| || |||||||| ||| |||||| ||||| ||||
Sbjct: 6 ccctccgtattttaatgcatgacgccgttaactttttatcaaacgtttgacctttcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
||| | |||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 66 tatacaaaaaatttatctaattatcatttattttattgtgacttgatttatcatcaaata 125
Query: 123 ttctttaagcatgacataagta-tttttgcatttgcatnnnnnnnttgaataagatgaat 181
|||||||||||| ||||||||| ||||| ||||| || || ||||||| ||||
Sbjct: 126 ttctttaagcataacataagtattttttatatttgtataaaaaatttaaataagacgaat 185
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 186 ggtcaaacgttgattaaaaagttaacggcgtcatacattaaaatacgaagggag 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 171 ataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
|||||| ||| | ||||||||| | |||||||| ||||||||||| ||||||||||||||
Sbjct: 68 ataagacgaaaggtcaaacgtttgataaaaagttaacggcgtcatgcattaaaatacgga 9
Query: 231 gggag 235
|||||
Sbjct: 8 gggag 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||| ||||||||||||||||||||| || ||||||||| | |||||| || || ||||
Sbjct: 237 cccttcgtattttaatgtatgacgccgttaactttttaatcaacgtttgaccattcgtct 178
Query: 64 tatt 67
||||
Sbjct: 177 tatt 174
>RF01058;MIR806;AP008211.1/27834081-27834321 39947:Oryza sativa
Japonica Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 200/233 (85%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||||| || ||||||||||||| | ||||| || ||||| |
Sbjct: 6 ccctccgtattttaatgtatgactccgttgactttttaaccaatgtttgaccatttgttt 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| |||| |||||||||||||||| ||| |||||||| |||||||||||
Sbjct: 66 tatttaaaaaatttatgttattatcatttattttactgtgacttgattaatcatcaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||||||||| |||| ||||||| |||| || |||||||||| |||||
Sbjct: 126 ttctttaagcatgatataaatatttttatatttacacaaaaaatttgaataagacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 186 gtcaaacgttgattaaaaagtcaacgacatcatacattaaaatacggagggag 238
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 179 aatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 60 aatggtcaaacattggttaaaaagtcaacggagtcatacattaaaatacggagggag 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||| | | |||||||||||| | |||||| || || ||||
Sbjct: 236 ccctccgtattttaatgtatgatgtcgttgactttttaatcaacgtttgaccattcgtct 177
Query: 64 tatt 67
||||
Sbjct: 176 tatt 173
>RF01058;MIR806;AACV01007789.1/15836-16076 39947:Oryza sativa
Japonica Group
Length = 241
Score = 208 bits (105), Expect = 3e-53
Identities = 192/223 (86%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt-aa 69
||||||||||||||| || |||||||||| |||| |||||| ||| | |||| ||| ||
Sbjct: 13 tattttaatgtatgatgctgttgactttttgacaaacgtttgacctatcgtctaattcaa 72
Query: 70 caaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 73 aaaaaatatgtaattatcatttattttattgtgacttgatttattatcaaatgttcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||||||| |||| ||||||| ||| | || ||||||||| ||||||||||||
Sbjct: 133 agcatgatataaatatttttatattcgtataaaaattttgaataaggcgaatgatcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 193 gttggttaaaaagttaacggcgtcatacattaaaatatggagg 235
Score = 58.0 bits (29), Expect = 6e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||| ||||||||||||||||||| || |||||||||| | ||||||
Sbjct: 235 cctccatattttaatgtatgacgccgttaactttttaaccaacgtttg 188
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| || ||||||||||| || ||||||||||||||| | ||||||
Sbjct: 55 tcaaacgtttgtcaaaaagtcaacagcatcatacattaaaataagaagggag 4
>RF01058;MIR806;AC136228.2/107628-107389 39947:Oryza sativa Japonica
Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 199/231 (86%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| ||||||||| ||||||||| || |||||||||||| ||||| | ||| ||||||
Sbjct: 8 ctccatattttaatatatgacgccgttaactttttaacaaatgtttgacatttcgtctta 67
Query: 66 tt-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgtt 124
| || |||||||| | ||||| |||| ||||||||| ||||||||||||| ||||||||
Sbjct: 68 ctcaaaaaaattatatgattataattt-ttttattgtgacttgatttatcagcaaatgtt 126
Query: 125 ctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgat 184
||||||||||||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 127 ctttaagcatgacataagtatttttatatttgcataaaaattttgaataagacgagtgat 186
Query: 185 caaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 187 caaacgttggttaaaaaatcaacggcgtcatatattaaaatatggagggag 237
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
|||||| || |||||||||| |||||||||||| ||||||||| ||||
Sbjct: 55 tcaaacatttgttaaaaagttaacggcgtcatatattaaaatatggag 8
>RF01058;MIR806;AACV01007258.1/13217-12976 39947:Oryza sativa
Japonica Group
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 186/214 (86%), Gaps = 2/214 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||||| |||||||||| |||| |||||| |||| || |
Sbjct: 6 ccctccgtattttaatgtatgacgccgttgacttttttacaaacgtttgatctttcgtgt 65
Query: 64 tatt-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatc-aaat 121
|||| || ||| |||||||||||| |||||||||||||| ||||||||||||||| ||||
Sbjct: 66 tattcaaaaaatttatgtaattataatttattttattgtgacttgatttatcatcaaaat 125
Query: 122 gttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaat 181
||| ||||||||||| |||||||||||| |||||||| |||||||||| || |
Sbjct: 126 gttatttaagcatgatataagtatttttatatttgcataaaatttttgaataagacgagt 185
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcat 215
| ||||||||||||||||||||||| ||||||||
Sbjct: 186 ggtcaaacgttggttaaaaagtcaatggcgtcat 219
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataacacgaaagatcaaacgtttgtaaaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
Score = 48.1 bits (24), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 22 atgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||| | ||||||
Sbjct: 219 atgacgccattgactttttaaccaacgtttg 189
>RF01058;MIR806;AACV01000531.1/1711-1951 39947:Oryza sativa Japonica
Group
Length = 241
Score = 198 bits (100), Expect = 2e-50
Identities = 198/230 (86%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||| |||||||||||||||||| |||||||||| || | |||||| | ||||||||
Sbjct: 6 ccctccgcattttaatgtatgacgccgttgactttttgaccaacgtttgactttttgtct 65
Query: 64 tatt-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| || ||| |||||||||||| ||||||||||||| ||||||||||| ||||||||
Sbjct: 66 tattcaaaaaatttatgtaattataatttattttattgagacttgatttat-atcaaatg 124
Query: 123 ttctttaagca-tgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaat 181
||||||||||| |||||||||||||||| ||||| || || ||||||| || |
Sbjct: 125 ttctttaagcattgacataagtatttttatatttgtataaaatttttaaataagacgagt 184
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
| ||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 185 ggtcaaacgtttattaaaaagtcaacggtgtcatacattaaaatacggag 234
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 55 tcaaacgttggtcaaaaagtcaacggcgtcatacattaaaatgcggagggag 4
Score = 63.9 bits (32), Expect = 9e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||||| || |||||||||||| || ||||||
Sbjct: 234 ctccgtattttaatgtatgacaccgttgactttttaataaacgtttg 188
>RF01058;MIR806;AACV01017182.1/3207-2966 39947:Oryza sativa Japonica
Group
Length = 242
Score = 198 bits (100), Expect = 2e-50
Identities = 200/234 (85%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||| ||||||||| ||||||||||||||| | |||||| || || ||||
Sbjct: 6 ccctccgtatttttatgtatgacaccattgactttttaatcaacgtttgaccattcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 66 tattaagaaaatttatgtaattatcatttattttattgtgagttgatttatcatcaaata 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgca-tnnnnnnnttgaataagatgaat 181
|||||||| ||| || ||| |||||||| ||||||| |||||||| | ||||
Sbjct: 126 ttctttaaacataacgtaaatatttttgtatttgcacaaaaaattttgaataatacgaat 185
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| |||||| || || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 186 ggtcaaactttcgtaaaaaagtcaatggcgtcatacattaaaatacggagggag 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||||||| |||||||||||| || ||||||||| |||||||||
Sbjct: 69 aataagacgaatggtcaaacgttgattaaaaagtcaatggtgtcatacataaaaatacgg 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 ccctccgtattttaatgtatgacgccattgacttttt 201
>RF01058;MIR806;AAAA02003949.1/7914-8153 39946:Oryza sativa Indica
Group
Length = 240
Score = 196 bits (99), Expect = 1e-49
Identities = 196/229 (85%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||||||||||||| | ||||||||| | | |||||| || || ||||
Sbjct: 6 ccctccatattttaatgtatgacgccgtcgactttttatctaacgtttgaccattcgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||| | ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 66 tattca-aaaattatgtaattatcatttattttattgtgacttgattcatcattaaatgt 124
Query: 124 tctttaagcatgacataagtatttttgcatttgcat-nnnnnnnttgaataagatgaatg 182
||||||||||| || ||| |||||| |||||||| || ||||| |||||||
Sbjct: 125 tctttaagcataacgtaaatattttcatatttgcataaaaaaatttaaataaaatgaatg 184
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 185 gtcaaacgttagttaaaaagttaacggcgtcatacattaaaatacggag 233
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | ||||||||| |||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttagataaaaagtcgacggcgtcatacattaaaata 13
Query: 227 cggagggag 235
||||||||
Sbjct: 12 tggagggag 4
Score = 63.9 bits (32), Expect = 9e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||||| || |||||||||| | ||||||
Sbjct: 233 ctccgtattttaatgtatgacgccgttaactttttaactaacgtttg 187
>RF01058;MIR806;AAAA02022950.1/62096-62335 39946:Oryza sativa Indica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 189/220 (85%), Gaps = 2/220 (0%)
Strand = Plus / Plus
Query: 18 atgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaacaaaatt- 76
|||||||||||| ||||||||||| | |||||| | || |||||||| | ||||||
Sbjct: 18 atgtatgacgccgttgactttttattcaacgtttgactattcgtcttattcaaaaaattt 77
Query: 77 atgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatga 136
||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 78 atgtaattatcatttattttattgtgacttaattcatcatcaaatgttctttaagcatga 137
Query: 137 cataagtatttttgcatttgca-tnnnnnnnttgaataagatgaatgatcaaacgttggt 195
||||| |||||| ||||||| |||||||| | ||||| ||||||||||||
Sbjct: 138 cataaatattttcatatttgcacaaaaaatcttgaataaaacgaatggtcaaacgttggt 197
Query: 196 taaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 taaaaagtcaacggcgtcatacattaaaatacggagggag 237
Score = 75.8 bits (38), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccgttgactttttaaccaacgtttg 187
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacat 219
|||||||||| |||| |||||||||| ||||||||||||||||||||||||
Sbjct: 70 ttgaataagacgaatagtcaaacgttgaataaaaagtcaacggcgtcatacat 18
>RF01058;MIR806;AAAA02008085.1/17196-17435 39946:Oryza sativa Indica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 196/232 (84%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||| ||| || | ||||| | || |||||| |||||||||
Sbjct: 6 ccctccgtattttaatgtatgccgctgttaattttttgagaaacgtttgatcttttgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||| | |||||||| ||||||| |||||||||||| | | || ||||||||||| || |
Sbjct: 66 tattcaaaaaattatataattataatttattttattatgatttaatttatcatcacatat 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||| |||| |||||||||||| |||||||| |||||||||| || ||
Sbjct: 126 tctttaagtatgatataagtatttttatatttgcataaaaattttgaataagacgagtgg 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttaaacgttgattaaaaagtcaacggcgtcatacattaaaatacggagggag 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccgttgactttttaa 197
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| || ||||||||||| | ||||| | ||| ||| ||||||||||||||
Sbjct: 72 ttgaataagacaaaagatcaaacgtttctcaaaaaattaacagcggcatacattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
>RF01058;MIR806;AAAA02032881.1/486-247 39946:Oryza sativa Indica
Group
Length = 240
Score = 192 bits (97), Expect = 2e-48
Identities = 198/232 (85%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||||| |||||||||||||||| |||||||||| | | |||||| || || |||||
Sbjct: 7 cctccgttttttaatgtatgacgctgttgactttttgtctaacgtttgaccattcgtctt 66
Query: 65 attaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg-t 123
||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 67 attcaaaaaattatgtaattatcatttattttattgtgacttgatttgtcatcaaatgtt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
| |||||| |||| |||| ||||||| |||||||| |||||||| | |||||
Sbjct: 127 tttttaagtatgatataaatatttttatatttgcat-aaaaatttgaataaaacgaatgg 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tcaaacgttgatcgaaaagtcaacggcgtcatacattaaaatacggagggag 237
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | ||||||||||| |||||||||||||||| |
Sbjct: 72 ttgaataagacgaatggtcaaacgttagacaaaaagtcaacagcgtcatacattaaaaaa 13
Query: 227 cggagg 232
||||||
Sbjct: 12 cggagg 7
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||||||||||||| |||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccgttgactttt 200
>RF01058;MIR806;AP008215.1/3163452-3163212 39947:Oryza sativa
Japonica Group
Length = 241
Score = 192 bits (97), Expect = 2e-48
Identities = 193/227 (85%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||||||||| |||||||||||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacaccattgactttttatctaacgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttaatgtgacttgatttatcatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
| ||||||||||| |||| ||||||| ||||||| |||||||| | |||||
Sbjct: 127 tatttaagcatgatataaatatttttatatttgcacaaaaattttgaataaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
||||| ||| || |||| ||||||||||||||||||||||||||||
Sbjct: 187 tcaaatgttagtcgaaaaatcaacggcgtcatacattaaaatacgga 233
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | ||||||||||| || ||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttagataaaaagtcaatggtgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tccgtattttaatgtatgacgccattgactttt 39
||||||||||||||||||||||| |||| ||||
Sbjct: 233 tccgtattttaatgtatgacgccgttgattttt 201
>RF01058;MIR806;AAAA02006990.1/37775-38015 39946:Oryza sativa Indica
Group
Length = 241
Score = 190 bits (96), Expect = 6e-48
Identities = 192/226 (84%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt-aa 69
||||||||||||||||||| || ||||||| | | |||| || || ||||||| ||
Sbjct: 13 tattttaatgtatgacgccgttaactttttgtttaacatttgaccattcatcttattcaa 72
Query: 70 caaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 73 aaaaattatgtaattatcatttattttattgtgacttgattcattatcaaatgttcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|||||||||||| ||||||| |||||||| |||||||| |||||| |||||
Sbjct: 133 agcatgacataaatatttttatatttgcataaaaattttgaataaactgaatggtcaaag 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||| |||||| ||||| |||||||||||||||||||||||||
Sbjct: 193 gttggttgaaaagttaacggtgtcatacattaaaatacggagggag 238
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||
Sbjct: 72 ttgaataagatgaatggtcaaatgttaaacaaaaagttaacggcgtcatacattaaaata 13
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
||||||||||||||||||||||| || || ||||||
Sbjct: 236 ccctccgtattttaatgtatgacaccgttaactttt 201
>RF01058;MIR806;AACV01017103.1/1019-780 39947:Oryza sativa Japonica
Group
Length = 240
Score = 190 bits (96), Expect = 6e-48
Identities = 194/230 (84%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||||||||||| | || |||||| | | ||||| || || ||||
Sbjct: 6 ccctccatattttaatgtatgacgtcgtttgctttttgatgaatgtttggccgttcgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||| | || ||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 66 tattcaaaactttatgtaattatcatttgttttattgtgacttgatttatcatcaaatgt 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||||||||| ||| ||| |||||||| || ||||||| |||||
Sbjct: 126 tctttaagcatgacataaatatgtttatatttgcataaaaattttaaataagacgaatgg 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggaggg 233
|||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 186 tcaaacgttgattaaaaagtcaacgatgtcatacattaaaatacggaggg 235
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||||| | |||||||||||| | |||||| || || ||||
Sbjct: 235 ccctccgtattttaatgtatgacatcgttgactttttaatcaacgtttgaccattcgtct 176
Query: 64 tatt 67
||||
Sbjct: 175 tatt 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 205 aacggcgtcatacattaaaatacggagggag 235
|||| ||||||||||||||||| ||||||||
Sbjct: 34 aacgacgtcatacattaaaatatggagggag 4
>RF01058;MIR806;AP008211.1/24947572-24947332 39947:Oryza sativa
Japonica Group
Length = 241
Score = 190 bits (96), Expect = 6e-48
Identities = 192/226 (84%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||| ||||| |||||||||||| | |||||| || || |||||||| |
Sbjct: 13 tattttaatgtattacgccgttgactttttaatcaacgtttgaccattcgtcttatttaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 73 aaaatttatgtaattgtcatttattttattgtgacttgatttatcatcaaatattcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|||||| || || ||||||| ||||||| || ||||| ||||||||||||||
Sbjct: 133 agcatggcacaaatatttttatatttgcacaaaaaatttaaataaaatgaatgatcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| | |||||||||||||||||||| |||||||| ||||||||
Sbjct: 193 gttgttcgaaaagtcaacggcgtcatacgttaaaatatggagggag 238
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 69 aataagacgaatggtcaaacgttgattaaaaagtcaacggcgtaatacattaaaata 13
>RF01058;MIR806;AP008216.1/1576558-1576798 39947:Oryza sativa
Japonica Group
Length = 241
Score = 190 bits (96), Expect = 6e-48
Identities = 192/226 (84%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt-aa 69
||||||||||||||||| ||||||||| | | | |||||| || ||||||||||| ||
Sbjct: 13 tattttaatgtatgacgttgttgacttttcatccaacgtttgaccatttgtcttattcaa 72
Query: 70 caaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||| ||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||
Sbjct: 73 caaatttatgtaattatcatttattttactgtgacttgattcatcatcaaatattcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|| |||| |||| ||||||| |||| || |||||||| | ||||| ||||||
Sbjct: 133 agaatgagataaatatttttatattttcacagtaaatttgaataaaacgaatggtcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 193 gttggttaaaaagtcaacggtgtcatacattaaaatacggatggag 238
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||| ||||||||||| | |||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacaaatggtcaaacgttggatgaaaagtcaacaacgtcatacattaaaata 13
Score = 61.9 bits (31), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 7 tccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||| || ||||||||||||| | ||||||
Sbjct: 233 tccgtattttaatgtatgacaccgttgactttttaaccaacgtttg 188
>RF01058;MIR806;AP008207.1/29466463-29466702 39947:Oryza sativa
Japonica Group
Length = 240
Score = 188 bits (95), Expect = 2e-47
Identities = 193/229 (84%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||||||||||||||||||||||| ||||||||||| | ||||| || || |||||
Sbjct: 8 ctccgtattttaatgtatgacgccgttgactttttatttaatgtttgaccattcatctta 67
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
|| | ||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 68 ttcaaaaatatatataattattatttattttattgtgccttgattcatcatcaaatgttc 127
Query: 126 tttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatc 185
||||||||||| |||| ||||||| ||||||| |||||||| | ||||| ||
Sbjct: 128 tttaagcatgatataaatatttttatatttgcacaaaaattttgaataaaacgaatggtc 187
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggaggga 234
||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 188 aaacgtttgttaaaaagtcaacggcgtcatacattaaaatatggaggga 236
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||| |||||| || |||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataagatgaatggtcaaacattaaataaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggag 231
|||||
Sbjct: 12 cggag 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||| ||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 235 ccctccatattttaatgtatgacgccgttgactttttaacaaacgtttg 187
>RF01058;MIR806;AACV01010263.1/2158-2397 39947:Oryza sativa Japonica
Group
Length = 240
Score = 188 bits (95), Expect = 2e-47
Identities = 193/226 (85%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||| || || |||||||||| ||| | |||| || || |||||||| |
Sbjct: 13 tattttaatgtataacaccgttgacttttttccaa-catttgacccttcgtcttattcaa 71
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| |||||||||| |||||||||| ||| |||||||||||| ||||||||||||||
Sbjct: 72 aaaatttatgtaattattatttattttactgtaacttgatttatcgtcaaatgttcttta 131
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|||||||||||| ||||||| ||||| || |||||||| | ||||| ||||||
Sbjct: 132 agcatgacataaatatttttatatttgtataaaaaatttgaataaaacgaatggtcaaac 191
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gttggtcgaaaagtcaacggcgtcatacattaaaatacggagggag 237
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||||||||||||| |||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccgttgactttt 200
Score = 48.1 bits (24), Expect = 6e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| | ||||| ||||| ||||||||||||| || |||||||||||||
Sbjct: 71 ttgaataagacgaagggtcaaatgttgga-aaaaagtcaacggtgttatacattaaaata 13
>RF01062;MIR812;AAAA02030315.1/29651-29479 39946:Oryza sativa Indica
Group
Length = 173
Score = 186 bits (94), Expect = 9e-47
Identities = 151/172 (87%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttatt-aacaaaattatgtaattatcattt 91
||||||||||||| |||||| ||||| |||||||| || |||||||||||||||| ||||
Sbjct: 173 gactttttaacaaacgtttgacctttcgtcttattcaaaaaaattatgtaattataattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| ||||||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct: 113 attttattgtgacttgatttattatcgaatgttatttaagcatgacataagtatttttgt 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagt 203
|||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 53 atttgcataaaaaaattgaataagacgaatggtcagacgttggttaaaaagt 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||| | ||||||||| |||||||||||
Sbjct: 136 ttgaataagacgaaaggtcaaacgtttgttaaaaagtc 173
>RF01058;MIR806;ABRL01001595.1/477-713 65489:Oryza barthii
Length = 237
Score = 186 bits (94), Expect = 9e-47
Identities = 190/224 (84%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| ||||||||||| | | |||||| || || |||||||| |
Sbjct: 10 tattttaatgtatgacgccgttgactttttacccaacgtttgaccattcgtcttattcaa 69
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||||| |||||||||||||| |||||||| || ||||||| ||||||||
Sbjct: 70 aaaattatgtaattattatttattttattgtgacttgattcattatcaaatattctttaa 129
Query: 131 gcatgacataagtatttttgcatttgca-tnnnnnnnttgaataagatgaatgatcaaac 189
||||||||||| ||||||| ||||||| |||||||| | ||||| ||||||
Sbjct: 130 gcatgacataaatatttttatatttgcacaaaattttttgaataaaacgaatggtcaaac 189
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggaggg 233
|||||| ||| || ||||| |||||||||||||||||||||||
Sbjct: 190 gttggtcgaaaggttaacggtgtcatacattaaaatacggaggg 233
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 69 ttgaataagacgaatggtcaaacgttgggtaaaaagtcaacggcgtcatacattaaaata 10
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 cccctccgtattttaatgtatgac 26
||||||||||||||||||||||||
Sbjct: 234 cccctccgtattttaatgtatgac 211
>RF01058;MIR806;AL732638.6/73727-73488 4530:Oryza sativa (rice)
Length = 240
Score = 182 bits (92), Expect = 1e-45
Identities = 193/230 (83%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| ||||||||||||||||||| |||||||||| | |||||| || || |||||
Sbjct: 8 ctccatattttaatgtatgacgccgttgacttttttttcaacgtttgaccattcatctta 67
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
|||| |||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||
Sbjct: 68 ttaaaaaaattatgtaattattatttattttattgtgacttgattcatcgtcaaatgttc 127
Query: 126 tttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatc 185
||||||||| |||||| |||||| |||| || |||||||| | ||||| ||
Sbjct: 128 tttaagcataacataaatattttcatattttcacaaaaaaattgaataaaacgaatggtc 187
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 188 aaacgttggtcaaaaagtcaatagcatcatacattaaaatacggagggag 237
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 69 aataagatgaatggtcaaacgttgaaaaaaaagtcaacggcgtcatacattaaaatatgg 10
Query: 230 ag 231
||
Sbjct: 9 ag 8
Score = 60.0 bits (30), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||| || ||||||||||| || | ||||||
Sbjct: 235 ccctccgtattttaatgtatgatgctattgactttttgaccaacgtttg 187
>RF01058;MIR806;AP004812.3/107198-106958 39947:Oryza sativa Japonica
Group
Length = 241
Score = 178 bits (90), Expect = 2e-44
Identities = 195/232 (84%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||| |||||||||||||||||||||||||| ||||| | | |||||| || || | |
Sbjct: 6 cccttcgtattttaatgtatgacgccattgatttttttatcaacgtttgaccattcattt 65
Query: 64 tattaacaaaa-ttatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||| ||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 66 tattcaaaaaagttatgtaattatcatttattttattatcacttgatttatcatcaaata 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||||||| ||| ||||| ||||||| ||||||| |||||||||| |||||
Sbjct: 126 ttctttaagtatggcataaatatttttatatttgcacaaaaaatttgaataagacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggaggga 234
|||||||||| | ||| ||||||||||| |||||||||||||||||||||
Sbjct: 186 gtcaaacgttgttcgaaatgtcaacggcgttatacattaaaatacggaggga 237
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| ||||||| |||||||||| | ||||| |||| |||||||||||||||||||
Sbjct: 72 ttgaataaaatgaatggtcaaacgttgataaaaaaatcaatggcgtcatacattaaaata 13
Query: 227 cggagggag 235
|| ||||||
Sbjct: 12 cgaagggag 4
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgac 35
|||||||||||||||||||| ||||| |||||
Sbjct: 236 ccctccgtattttaatgtataacgccgttgac 205
>RF01058;MIR806;AP004880.3/148128-148367 39947:Oryza sativa Japonica
Group
Length = 240
Score = 178 bits (90), Expect = 2e-44
Identities = 196/232 (84%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||||||||||||||||||||| ||||||||||||||| | ||||| || || |||||
Sbjct: 7 cctccgtattttaatgtatgacgtcattgactttttaaccaatgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 67 atttaaaaaatttatgtaattatcatttattttattgtgacttgatttatcatcaaatat 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||| ||| || ||||||| | || || || ||||| | ||||
Sbjct: 127 tctttaagcataacacaaatatttttataatttcacaaaaattttaaataaaacaaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||| ||| |||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 187 tcaaatgtt-gttaaaaagttaacggcgtcacacattaaaatacggagggag 237
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacattggttaaaaagtcaatgacgtcatacattaaaatacgg 10
Query: 230 agg 232
|||
Sbjct: 9 agg 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaa 45
|||||||||||||||||| ||||||| || ||||||||||||
Sbjct: 235 ccctccgtattttaatgtgtgacgccgttaactttttaacaa 194
>RF01058;MIR806;AAAA02021468.1/1703-1944 39946:Oryza sativa Indica
Group
Length = 242
Score = 176 bits (89), Expect = 9e-44
Identities = 196/234 (83%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||||||| |||||||||||| | |||||| || || ||||
Sbjct: 6 ccctccgtattttaatgtatgacgctgttgactttttaatcaacgtttgaccattcgtct 65
Query: 64 tattaacaaaa--ttatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
|||||| |||| |||||| ||||||||||||||||| | | |||||||||||||||||
Sbjct: 66 tattaaaaaaaatttatgttattatcatttattttatcttgatttgatttatcatcaaat 125
Query: 122 gttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaat 181
||||||||| |||| |||| ||||||| |||| | |||||||| || |||
Sbjct: 126 gttctttaaacatgctataaatatttttatatttatacaaaaattttgaataaaataaat 185
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| ||||| |||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggtcaaatgttgattataaagtcaacggcgtcatacattaaaatacggagggag 239
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacgttgattaaaaagtcaacagcgtcatacattaaaatacgg 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttt 38
|||||||||||||||||||||||||| ||||||||
Sbjct: 237 ccctccgtattttaatgtatgacgccgttgacttt 203
>RF01062;MIR812;AACV01022508.1/1780-1951 39947:Oryza sativa Japonica
Group
Length = 172
Score = 172 bits (87), Expect = 1e-42
Identities = 151/173 (87%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttatt-aacaaaattatgtaattatcattt 91
||||||||||||| ||||| |||||| ||||||| || |||||||| | ||||||||||
Sbjct: 172 gactttttaacaaacgtttaaccttttatcttatttaaaaaaattatttgattatcattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 112 attttattgtgacttgatttatcatc-aatgttctttaagcatgaaataagtatttttgt 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtc 204
||||| || |||||||||| ||||| |||||||||||||||||||||
Sbjct: 53 atttgtataaaaaatttgaataagacgaatggtcaaacgttggttaaaaagtc 1
>RF01058;MIR806;AACV01015174.1/7144-6908 39947:Oryza sativa Japonica
Group
Length = 237
Score = 172 bits (87), Expect = 1e-42
Identities = 187/222 (84%), Gaps = 5/222 (2%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||| ||||||| |||||| ||||||||||| | | |||||| || |||||||
Sbjct: 6 ccctccgttttttaatatatgacataattgactttttgatatacgtttgaccatttgtct 65
Query: 64 tatt-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 66 tattcaaaaaaattatgtaattatcatttattttattgtgtcttgatttatcatcaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||||||||||| | ||||| ||||||| ||||||||||| ||||
Sbjct: 126 ttctttaagcatgaca----tttttttatatttgcacaaaaaaattgaataagataaatg 181
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaa 224
||||||||| ||||||||||||| ||||||||| |||||||
Sbjct: 182 gtcaaacgtttgttaaaaagtcaatggcgtcatatattaaaa 223
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 13 ttttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt 67
||||||| ||||||||||||||||||||||||| |||||| || ||| |||||||
Sbjct: 223 ttttaatatatgacgccattgactttttaacaaacgtttgaccatttatcttatt 169
>RF01058;MIR806;AL713944.3/10154-9914 4530:Oryza sativa (rice)
Length = 241
Score = 172 bits (87), Expect = 1e-42
Identities = 195/233 (83%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||||||| |||||||||| | | ||||| || || |||
Sbjct: 6 ccctccgtattttaatgtatgacgctgttgactttttgtccaatgtttgaccattcatct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| |||||||||||||||||||||| || |||||||| || |||||||
Sbjct: 66 tattcaaaaaatttatgtaattatcatttattttatcgtgacttgattcattatcaaata 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||||||||||||||||| |||||| |||||||| |||||||||| ||||
Sbjct: 126 ttctttaagcatgacataaatattttcatatttgcataaaatttttgaataagacgaata 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| || |||||||||||||||||||| |||||| ||||||||||
Sbjct: 186 gtcaaacgtttgtcgaaaagtcaacggcgtcatacgttaaaacacggagggag 238
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||| |||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 72 ttgaataagatgaatggtcaaacattggacaaaaagtcaacagcgtcatacattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
>RF01062;MIR812;AAAA02009916.1/100346-100174 39946:Oryza sativa
Indica Group
Length = 173
Score = 170 bits (86), Expect = 6e-42
Identities = 149/172 (86%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 34 actttttaacaancgtttgnccttttgtcttatt-aacaaaattatgtaattatcattta 92
|||||||||||| |||||| ||||| |||| ||| || ||||||||||||||||||||||
Sbjct: 172 actttttaacaaacgtttgacctttcgtctaattcaaaaaaattatgtaattatcattta 113
Query: 93 ttttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgca 152
||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||| |
Sbjct: 112 ttttattgtgacttgatttatcatcaaatattctttaagcctaccataagtatttttgta 53
Query: 153 tttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtc 204
||||||| |||||||||| ||||| ||||| ||| |||||||||||
Sbjct: 52 tttgcataataaatttgaataagacgaatggtcaaatgttagttaaaaagtc 1
>RF01058;MIR806;AC120527.3/102892-102654 39947:Oryza sativa Japonica
Group
Length = 239
Score = 170 bits (86), Expect = 6e-42
Identities = 194/232 (83%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||| | || ||||||| | | |||||| |||||||
Sbjct: 6 ccctccgtattttaatgtatgacgacgttaacttttttatcaacgtttgattatttgtct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||| | ||| ||| ||| |||||||| |||||||||| ||||||||||||||||||| |
Sbjct: 66 tattcaaaaagttaggta-ttatcattaattttattgtcacttgatttatcatcaaatat 124
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||| ||| ||||| |||||||| |||||||| || ||||||| |||||
Sbjct: 125 tctttaaatatggcataaatatttttgtatttgcataaaaattttaaataagacgaatgg 184
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| ||||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 185 tcaaacgttgtttaaaaagtcaacggtgtcatatattaaaatacgaagggag 236
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| ||||||||||| | ||||||| |||| |||||||||||||||||
Sbjct: 72 ttgaataagacaaataatcaaacgttgataaaaaagttaacgtcgtcatacattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||| ||||||||||| |||||| || |||||||||||| | |||||| || || ||||
Sbjct: 234 cccttcgtattttaatatatgacaccgttgactttttaaacaacgtttgaccattcgtct 175
Query: 64 tatt 67
||||
Sbjct: 174 tatt 171
>RF01058;MIR806;ABRL01002048.1/3759-3519 65489:Oryza barthii
Length = 241
Score = 170 bits (86), Expect = 6e-42
Identities = 194/232 (83%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||| |||||| | |||||||||| | | |||||| || ||||||||
Sbjct: 7 cctccatattttaatatatgacatcgttgactttttgtccaacgtttgaccgtttgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||||| || ||||| ||||||||| |
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttattgtgacgtgattcgtcatcaaatat 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 127 tctttaagcatgatataagtattttcatatttgcataaatattttgaataaaatgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||| || ||||||||| |||||| ||||||||| ||||||||
Sbjct: 187 tcaaacgttggtcgaatagtcaacggtgtcatatattaaaatatggagggag 238
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| || | ||||||||||| |||||||||||| |||||| |||||||||
Sbjct: 72 ttgaataagacaaacggtcaaacgttggacaaaaagtcaacgatgtcatatattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
>RF01058;MIR806;AP008217.1/17463708-17463468 39947:Oryza sativa
Japonica Group
Length = 241
Score = 170 bits (86), Expect = 6e-42
Identities = 194/232 (83%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||| ||||||||| ||||||||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatatatgacgccgttgactttttatctaacgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||| | |||||||| ||||||||| |
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttattatgacttgattcgtcatcaaattt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||| |||||||||| |||||| ||||||| || ||||| || ||||
Sbjct: 127 tctttaaacatgacataaatattttcatatttgcacaaaaaatttaaataaaataaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| |||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 187 tcaaacattggttgagaagtcaacagcgtcatacattaaaatacggagggag 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttagataaaaagtcaacggcgtcatatattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactt 37
||||||||||||||||||||||||| |||||||
Sbjct: 236 ccctccgtattttaatgtatgacgctgttgactt 203
>RF01058;MIR806;AAAA02011582.1/23087-22847 39946:Oryza sativa Indica
Group
Length = 241
Score = 168 bits (85), Expect = 2e-41
Identities = 190/227 (83%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||||||||||||||||||||||| |||||||||||| | | |||| | || || |
Sbjct: 8 ctccgtattttaatgtatgacgccgttgactttttaaacaacatttgatcattcgtatat 67
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
| | ||| ||||||||||||||||||||||| ||| |||||||||||| ||||||| ||
Sbjct: 68 tctaaaaatttatgtaattatcatttattttagtgtgacttgatttatcgtcaaatgatc 127
Query: 126 tttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatc 185
||| ||||||||| || ||||||| ||||||| || ||||||||||||||||
Sbjct: 128 tttcagcatgacaaaaatatttttatatttgcacaaaaaatttaaataagatgaatgatc 187
Query: 186 aaacgttggt-taaaaagtcaacggcgtcatacattaaaatacggag 231
||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 188 aaacggtggtaaaaaaagtcaacggcgtcatacattaaaatacggag 234
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 178 gaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatgatcaaatgttgtttaaaaagtcaacggcgtcatacattaaaatacggag 8
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||||||||||| ||||||||||
Sbjct: 234 ctccgtattttaatgtatgacgccgttgacttttt 200
>RF01058;MIR806;AC027659.1/31128-30895 39947:Oryza sativa Japonica
Group
Length = 234
Score = 168 bits (85), Expect = 2e-41
Identities = 193/229 (84%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||||| |||||||||||| | |||||| | ||| |||
Sbjct: 6 ccctccgtattttaatgtatgacgccgttgactttttaagatacgtttgatcatttatct 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||||| ||||| ||| ||||||||||||||||||| |||| ||||||||| |||| |
Sbjct: 66 tattaaaaaaat---gtagttatcatttattttattgtgacttaatttatcattaaatat 122
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||||||||| ||||||| |||||||| | ||||||| |||||
Sbjct: 123 tctttaagcatgacatagatatttttatatttgcataaaaaa--taaataagacgaatgg 180
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
||||||||| | |||||||||||||| |||||||||||||||| |||||
Sbjct: 181 tcaaacgtt-gataaaaagtcaacggtgtcatacattaaaatatggagg 228
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 69 aataagataaatgatcaaacgtatcttaaaaagtcaacggcgtcatacattaaaatacgg 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||||||||| || ||||||||||| ||| |||||| || || |||||
Sbjct: 228 cctccatattttaatgtatgacaccgttgactttttatcaa-cgtttgaccattcgtctt 170
Query: 65 att 67
|||
Sbjct: 169 att 167
>RF01058;MIR806;BX548156.1/22367-22608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 167 bits (84), Expect = 9e-41
Identities = 188/225 (83%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 10 gtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaa 69
||||||||||||||||||| |||| |||||| | | | |||| || |||||| |||| |
Sbjct: 12 gtattttaatgtatgacgctgttgattttttatccaacatttgaccatttgtcatattca 71
Query: 70 caaaa--ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctt 127
|||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 72 aaaaaatttatgtaattatcatttattttattgtgacttgattcatcatcaaatgttctt 131
Query: 128 taagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaa 187
||||||||| |||| |||||| |||| || || ||||| | |||| ||||
Sbjct: 132 taagcatgatataaatattttcatattttcacaaaatttttaaataaaacaaatggtcaa 191
Query: 188 acgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 192 acgttggttaaaaagtcaacggcgtcatatattaaaatatggagg 236
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||| ||||||||| ||||||||||||| | |||||| || ||||| ||
Sbjct: 236 cctccatattttaatatatgacgccgttgactttttaaccaacgtttgaccatttgtttt 177
Query: 65 att 67
|||
Sbjct: 176 att 174
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 179 aatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatac 227
|||| ||||| ||||| |||||| ||||| |||||||||||||||||||
Sbjct: 60 aatggtcaaatgttggataaaaaatcaacagcgtcatacattaaaatac 12
>RF01058;MIR806;AACV01012356.1/6922-6682 39947:Oryza sativa Japonica
Group
Length = 241
Score = 167 bits (84), Expect = 9e-41
Identities = 189/226 (83%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| ||||||||||| | ||||| || || |||||||
Sbjct: 13 tattttaatgtatgacgccgttgactttttatttaatgtttgaatgttcgttttattaaa 72
Query: 71 aaaa-ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||| || |||||||||||||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 73 aaaaattgtgtaattatcatttatttcattgtgacttgattcataatcaaatgttcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|||||||||||| ||||||| ||||| | |||||||||| ||||| | ||||
Sbjct: 133 agcatgacataaatatttttatatttgtacaaaaattttgaataagacgaatggttaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 193 attggataaaaagtcaatggcgtcatacattaaaatacggagggag 238
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttta 41
||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ccctccgtattttaatgtatgacgccattgacttttta 199
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 196 taaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||||||||||||||||||
Sbjct: 43 taaaaagtcaacggcgtcatacattaaaata 13
>RF01058;MIR806;AAAA02021936.1/16914-17155 39946:Oryza sativa Indica
Group
Length = 242
Score = 167 bits (84), Expect = 9e-41
Identities = 194/233 (83%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||| ||||||||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgttgttgactttttatccaacgtttgaccattcgtctt 66
Query: 65 att--aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
||| || |||||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 67 attcaaaaaaaattatgtaattattatttattttattgtgacttgattcgtcatcaaatg 126
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||| |||| ||||| ||||||| ||||| | |||||||| | |||||
Sbjct: 127 ttctttaaacatggcataaatatttttatatttgtacacaaaaattgaataaaacgaatg 186
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||| | ||||| || | ||||||||||||||||||||||||||
Sbjct: 187 gtcaaacgttggtcagaaagttaatgacgtcatacattaaaatacggagggag 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggataaaaagtcaacaacgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttt 38
|||||||||||||||||||||||| |||| |||||
Sbjct: 237 ccctccgtattttaatgtatgacgtcattaacttt 203
>RF01058;MIR806;AC097447.4/113483-113723 39947:Oryza sativa Japonica
Group
Length = 241
Score = 167 bits (84), Expect = 9e-41
Identities = 187/222 (84%), Gaps = 2/222 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||| ||||||||||| ||||||||||| | | |||||| || || |||||||| |
Sbjct: 14 tattttactgtatgacgccgttgactttttatccaacgtttgaccattcgtcttattcaa 73
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| ||||| |||| |||||||||||| | |||||||| |||||| |||||||||||
Sbjct: 74 aaaatttatgtagttattatttattttattctgacttgattaatcatcgaatgttcttta 133
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|| ||||||||| ||||| | |||||||| |||||||| | ||||| ||||||
Sbjct: 134 agaatgacataaatatttgcgtatttgcattaaaattttgaataaaacgaatggtcaaac 193
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 194 gtt-gataaaaagtcaacggcgtcgtacattaaaatacggag 234
Score = 87.7 bits (44), Expect = 7e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 73 ttgaataagacgaatggtcaaacgttggataaaaagtcaacggcgtcatacagtaaaata 14
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgacttttta 41
||||||||||||||||| |||||| |||||||||||
Sbjct: 234 ctccgtattttaatgtacgacgccgttgacttttta 199
>RF01058;MIR806;AAAA02015377.1/29726-29966 39946:Oryza sativa Indica
Group
Length = 241
Score = 167 bits (84), Expect = 9e-41
Identities = 192/230 (83%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||||||||||||| || |||||||| | | |||| || || ||||
Sbjct: 6 ccctccatattttaatgtatgacgccgttaactttttatccaatatttgaccattcgtct 65
Query: 64 tatt-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| || |||||||||||| | | |||||||||||||| |||||||| ||| |||||||
Sbjct: 66 tatttaaaaaaattatgtaaatgtgatttattttattgtgacttgattcatcgtcaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||||||||||||||||| |||||| ||||||| || ||||| || ||||
Sbjct: 126 ttctttaagcatgacataaatattttcatatttgcaaaaaaaaattaaataaaataaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 186 gtcaaacgttggtcaaaaagtcaacagtgtcatacattaaaatacggagg 235
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| ||||| |||| |||||||| |||||||||||||||||||||| ||
Sbjct: 69 aataagacgaatggtcaaatattggataaaaagttaacggcgtcatacattaaaatatgg 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||| | |||||||||| || | ||||||
Sbjct: 235 cctccgtattttaatgtatgacactgttgactttttgaccaacgtttg 188
>RF01062;MIR812;AP008213.1/1136426-1136255 39947:Oryza sativa
Japonica Group
Length = 172
Score = 165 bits (83), Expect = 3e-40
Identities = 150/173 (86%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| |||| |||||| ||||| |||||||| | |||||| |||||||||||||||
Sbjct: 172 gactttttgacaaacgtttgacctttcgtcttattcaaaaaatttatgtaattatcattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 112 attttattgtgacttgatttatcatcaaatgtt-tttaagcatgatataagtatttttat 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtc 204
||| |||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 53 attcgcataaaaagtttgaataagacgaatagtcaaacgttggttaaaaagtc 1
>RF01058;MIR806;AAAA02006356.1/20268-20506 39946:Oryza sativa Indica
Group
Length = 239
Score = 165 bits (83), Expect = 3e-40
Identities = 123/136 (90%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||| ||||||||||||||||||||| |||||||||| || | |||||| || |||||||
Sbjct: 6 cccttcgtattttaatgtatgacgccgttgactttttgactaacgtttgaccatttgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||||| |||| | ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 66 tattaaaaaaaatcatgtaattatcatttattttattttgacttgatttatcatcaaata 125
Query: 123 ttctttaagcatgaca 138
||||||||||||||||
Sbjct: 126 ttctttaagcatgaca 141
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 69 aataagacaaatggtcaaacgttagtcaaaaagtcaacggcgtcatacattaaaatacga 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
>RF01058;MIR806;AAAA02032426.1/24628-24869 39946:Oryza sativa Indica
Group
Length = 242
Score = 165 bits (83), Expect = 3e-40
Identities = 190/228 (83%), Gaps = 2/228 (0%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| ||||||||||||||| ||| |||||||||| | || || || |||| || |||
Sbjct: 8 ctccatattttaatgtatgatgccgttgactttttgataaacgcttaatctttcgtttta 67
Query: 66 ttaacaaaa--ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||| |||| ||||||||| || |||||||||||||| |||| |||||||||||||| |
Sbjct: 68 ttaaaaaaaatttatgtaataataatttattttattgtgacttaatttatcatcaaatat 127
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||||||| ||||||||| |||||||| || |||||| || ||
Sbjct: 128 tctttaagcatgacatcagtatttttatatttgcataaaatttttaaataagtcgagtgg 187
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 188 ctaaacgttggttaaaaagtcaacggcgtcatacattaaaatatggag 235
Score = 61.9 bits (31), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgttt 51
|||| ||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 235 ctccatattttaatgtatgacgccgttgactttttaaccaacgttt 190
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 197 aaaaagtcaacggcgtcatacattaaaatacggag 231
|||||||||||||| ||||||||||||||| ||||
Sbjct: 42 aaaaagtcaacggcatcatacattaaaatatggag 8
>RF01058;MIR806;AP008207.1/6232049-6231810 39947:Oryza sativa
Japonica Group
Length = 240
Score = 165 bits (83), Expect = 3e-40
Identities = 195/233 (83%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||||| || ||||||| || | | |||| || | ||||
Sbjct: 6 ccctccgtattttaatgtatgacgccgttaactttttgaccaacatttgaccactcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | ||| || ||||||||||||||||||||||| | ||||||||||||||| ||||
Sbjct: 66 tattcaaaaagtttatgtaattatcatttattttattttgacttgatttatcatcgaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||||| || |||||||| ||||||| |||| || |||||||||| |||
Sbjct: 126 ttctttaggcctgacataaatatttttatatttacacaaaaattttgaataagacgaaca 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| | |||||||||||| |||||||||||||||||||||||||||
Sbjct: 186 gtcaaacgtt-gataaaaagtcaacagcgtcatacattaaaatacggagggag 237
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| || || ||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct: 72 ttgaataagacgagtggtcaaatgttggtcaaaaagttaacggcgtcatacattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttta 41
||||||||||||||||||||||||| |||||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgctgttgacttttta 198
>RF01058;MIR806;AAAA02027114.1/16107-15869 39946:Oryza sativa Indica
Group
Length = 239
Score = 165 bits (83), Expect = 3e-40
Identities = 194/232 (83%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||||||||||||||| | | | |||| || || ||||
Sbjct: 7 cctccatattttaatgtatgacgccattgactttttatctaacatttgaccattcatctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| |||| ||||||||||||||| |||| |||||||| ||||| ||||||
Sbjct: 67 attcaaaaaatttatgttattatcatttattttgttgtgacttgattcatcattaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||| ||||| |||||| |||||||| |||||||| | |||||
Sbjct: 127 tctttaagcatgtcataaatattttcatatttgcataaaatttttgaataaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| |||||||||| ||||| ||| ||||||||| ||||||||||||||||||
Sbjct: 187 ttaaacgttggtaaaaaa--caatggcgtcatatattaaaatacggagggag 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||| ||||| ||| | ||||||||||| |||||||||||||||||||
Sbjct: 72 ttgaataagatgaatggtcaaatgttagataaaaagtcaatggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattg 33
|||||||||||||||| |||||||||||||
Sbjct: 234 ccctccgtattttaatatatgacgccattg 205
>RF01062;MIR812;AACV01017318.1/2172-2001 39947:Oryza sativa Japonica
Group
Length = 172
Score = 163 bits (82), Expect = 1e-39
Identities = 117/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 129 ttatgtaattatcatttattttattgtgacttgatttatcatcaaatattctttaagcat 70
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|||||| |||||||| |||||||| |||||||||||||||| |||||||||||
Sbjct: 69 gacataggtatttttt-atttgcataaaagatttgaataagatgaatggtcaaacgttgg 11
Query: 195 ttaaaaagtc 204
||||||||||
Sbjct: 10 ttaaaaagtc 1
>RF01058;MIR806;AAAA02020557.1/13702-13942 39946:Oryza sativa Indica
Group
Length = 241
Score = 163 bits (82), Expect = 1e-39
Identities = 193/232 (83%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||| ||| ||||| |||||||||| | | ||||| || ||||||||
Sbjct: 7 cctccatattttaatctataacgccgttgactttttgtccaatgtttgaccatttgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 67 atttaaaaaatttatgtaattatcatttattttattgtgacttgatttgtcatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||| |||||||||| |||||| ||| |||| || ||||| | |||||
Sbjct: 127 tctttaaacatgacataaatattttcatattcgcataaaaattttaaataaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| || | ||||||||||||||||| |||||| ||||||||||||||
Sbjct: 187 tcaaacattaatcaaaaagtcaacggcgtcttacattgaaatacggagggag 238
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| |||| |||||| |||| |||||||||||||||| ||| ||||||||| ||
Sbjct: 69 aataagacaaatggtcaaacattggacaaaaagtcaacggcgttatagattaaaatatgg 10
Query: 230 agg 232
|||
Sbjct: 9 agg 7
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||| |||||| |||||| ||||||||||
Sbjct: 236 ccctccgtatttcaatgtaagacgccgttgacttttt 200
>RF01058;MIR806;AAAA02021140.1/4393-4634 39946:Oryza sativa Indica
Group
Length = 242
Score = 163 bits (82), Expect = 1e-39
Identities = 187/224 (83%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 13 ttttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaacaa 72
||||||||||||||||| ||||||||||| | | |||||| || || | ||||| | ||
Sbjct: 16 ttttaatgtatgacgccgttgactttttatctagcgtttgaccattcattttattcaaaa 75
Query: 73 aatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaag 131
|||| || || ||||||||||||||||| | |||| ||| ||||||||||||| ||||||
Sbjct: 76 aatttatatagttatcatttattttattttgacttaattcatcatcaaatgttttttaag 135
Query: 132 catgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgt 191
|||||||||| |||||| ||||||| |||||||| | ||||| ||||||||
Sbjct: 136 catgacataaatattttcatatttgcacaagagatttgaataaaacgaatggtcaaacgt 195
Query: 192 tggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 196 taattaaaaagtcaacggtgtcatacattaaaatacggagggag 239
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaa 224
|||||||| ||||||| ||||||| | | |||||||||||||||||||||||||||||
Sbjct: 73 ttgaataaaatgaatggtcaaacgctagataaaaagtcaacggcgtcatacattaaaa 16
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
||||||||||||||||||||||| || ||||||||||||
Sbjct: 237 ccctccgtattttaatgtatgacaccgttgactttttaa 199
>RF01058;MIR806;AAAA02023810.1/14826-14586 39946:Oryza sativa Indica
Group
Length = 241
Score = 163 bits (82), Expect = 1e-39
Identities = 190/227 (83%), Gaps = 3/227 (1%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttatt--a 68
|||||||||||||||||| |||| ||||| | | |||| || || |||||||| |
Sbjct: 13 tattttaatgtatgacgctgttgattttttgtttaacatttgaccattcgtcttattcaa 72
Query: 69 acaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttt 128
| |||| |||||||||||||||||||| ||| | |||| ||| |||||||||||||||||
Sbjct: 73 aaaaaaatatgtaattatcatttattt-attatgacttcattcatcatcaaatgttcttt 131
Query: 129 aagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaa 188
||||||||||||| ||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 132 aagcatgacataaatatttttatatttgcacaaaaaatttgaataaaatgaatggtcaaa 191
Query: 189 cgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 192 cgttggtcgacaagtcaacggcgtcatacattaaaatacggagggag 238
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactt 37
|||||||||||||||||||||||||| |||||||
Sbjct: 236 ccctccgtattttaatgtatgacgccgttgactt 203
Score = 48.1 bits (24), Expect = 6e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaatgttaaacaaaaaatcaacagcgtcatacattaaaata 13
>RF01058;MIR806;AAAA02040735.1/4088-4328 39946:Oryza sativa Indica
Group
Length = 241
Score = 161 bits (81), Expect = 5e-39
Identities = 195/234 (83%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||| ||| ||||| ||||||||||| | | |||||| || || ||||
Sbjct: 6 ccctccatattttaatatatcacgccgttgactttttatccaacgtttgaccattcgtct 65
Query: 64 tattaacaaaa--ttatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
|||| | |||| ||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct: 66 tattcagaaaaaattatgtaattatcatttattttattatgacttgattcatcatcaaat 125
Query: 122 gttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaat 181
|||||||||||||||||||| |||||| ||||||| || ||||| | ||||
Sbjct: 126 gttctttaagcatgacataaatattttcatatttgca-aaaaaaattaaataaaacgaat 184
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||| |||| ||||||| ||||| ||||||||||||| ||||
Sbjct: 185 gatcaaacgttggtcgaaaaatcaacggtatcatatattaaaatacggaaggag 238
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 168 tgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatac 227
||||||||| ||||| ||||||||||| ||||||||||||||||| ||| |||||||||
Sbjct: 71 tgaataagacgaatggtcaaacgttggataaaaagtcaacggcgtgatatattaaaatat 12
Query: 228 ggagggag 235
||||||||
Sbjct: 11 ggagggag 4
>RF01058;MIR806;AP008209.1/33184887-33184654 39947:Oryza sativa
Japonica Group
Length = 234
Score = 161 bits (81), Expect = 5e-39
Identities = 194/233 (83%), Gaps = 8/233 (3%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||||||||||| |||||||||||| | |||||| || || ||||
Sbjct: 6 ccctccgtattttaatgtatgacgctgttgactttttaattaacgtttgaccattcgtct 65
Query: 64 tattaacaaaatta-tgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| | |||||||||||||||||||||| |||| |||||||||| ||
Sbjct: 66 tattcaaaaaatttctataattatcatttattttattgtgacttaatttatcatcgaaaa 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||||||||||||| |||||| ||||||| || |||| |||||
Sbjct: 126 atctttaagcatgacataaatattttcatatttgcacaaa-------aaaaagacgaatg 178
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 179 gtcaaatgttggttaaaaagtcaatggcgtcatacattaaaatacggagggag 231
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttaattaaaaagtcaacagcgtcatacattaaaata 13
Query: 227 cggagggag 235
|||||||||
Sbjct: 12 cggagggag 4
Score = 79.8 bits (40), Expect = 2e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaac 43
||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ccctccgtattttaatgtatgacgccattgactttttaac 190
>RF01058;MIR806;AAAA02019803.1/32031-31790 39946:Oryza sativa Indica
Group
Length = 242
Score = 161 bits (81), Expect = 5e-39
Identities = 199/237 (83%), Gaps = 8/237 (3%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt----aacaancgtttgncctttt 59
||||||||||||||||||||| |||| | |||||||| | ||| |||||| || ||
Sbjct: 6 ccctccgtattttaatgtatggcgccgtcgactttttttttatcaa-cgtttgaccattc 64
Query: 60 gtcttattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatca 118
|||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 65 gtcttattcaaaaaatttatgtaattatcatttattttattgtgacttgatttatcatca 124
Query: 119 aatgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatg 178
||| ||||||||||||||||||| ||||||| | ||||| |||||||||| |
Sbjct: 125 aatattctttaagcatgacataaatatttttataattgca--caaaatttgaataagacg 182
Query: 179 aatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||| |||||||||| | |||||||||||| |||||| ||||||||| ||||||||
Sbjct: 183 aatagtcaaacgttgttagaaaagtcaacggtgtcatatattaaaatatggagggag 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaa---gtcaacggcgtcatacattaaa 223
|||||||||| ||||| |||||||||| | ||||| ||| |||||| |||||||||||
Sbjct: 75 ttgaataagacgaatggtcaaacgttgataaaaaaaaagtcgacggcgccatacattaaa 16
Query: 224 atacggagggag 235
||||||||||||
Sbjct: 15 atacggagggag 4
>RF01058;MIR806;AP008207.1/10224303-10224063 39947:Oryza sativa
Japonica Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 188/226 (83%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| |||| |||||| | |||||| | || ||||||| |
Sbjct: 13 tattttaatgtatgacgccgttgattttttattcaacgtttgactattcgtcttatccaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
||| || ||||||||||||||||||||||||| |||||||| |||||||||| |||||||
Sbjct: 73 aaagtttatgtaattatcatttattttattgttacttgattcatcatcaaatattcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||||||| |||| |||||| ||||||| || ||||| ||||||| ||||||
Sbjct: 133 agcatgatataaatattttcatatttgcaaaaaaagtttaaataaaatgaatggtcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||||||||| || |||| |||||||||||| ||||
Sbjct: 193 gttggttaaaaagtcaacggtgttatacgttaaaatacggatggag 238
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 171 ataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||| |||| |||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 68 ataagacgaatagtcaaacgttgaataaaaaatcaacggcgtcatacattaaaata 13
Score = 46.1 bits (23), Expect = 2e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 7 tccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||| |||| || || ||||||||||||| | ||||||
Sbjct: 233 tccgtattttaacgtataacaccgttgactttttaaccaacgtttg 188
>RF01058;MIR806;AACV01014792.1/12864-12624 39947:Oryza sativa
Japonica Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 191/230 (83%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||| |||||| ||| |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgattttttatcaaacgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| || ||||||||||||||||||| | ||| |||| ||||||||||||
Sbjct: 67 attcaaaaaatttatacaattatcatttattttattttgactcgattcatcatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||| |||| |||| || ||| ||||||| |||||||| | |||||
Sbjct: 127 tctttaagtatgatataaatactttcatatttgcacggaaattttgaataaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggaggg 233
|||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 187 tcaaacgttggtcgaaaagtcaacaacgtcatacattaaaatacggaggg 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgtttgataaaaaatcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 cccctccgtattttaatgtatgacg 27
|||||||||||||||||||||||||
Sbjct: 237 cccctccgtattttaatgtatgacg 213
>RF01058;MIR806;AC145127.1/472162-471927 39947:Oryza sativa Japonica
Group
Length = 236
Score = 159 bits (80), Expect = 2e-38
Identities = 191/230 (83%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||| |||||||| |||||||||| | ||||| || || |||||
Sbjct: 7 cctccatattttaatctatgacgctgttgactttttgttcaatgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttattataacttgattcgtcatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||| |||||| |||||| |||||||| |||||||| | ||||
Sbjct: 127 tctttaagcataacataaatattttcatatttgcataaaaattttgaataaaacaaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggaggg 233
|||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 187 tcaaacgttggtcgaatagtcaacggcgtcatacattaaaatacggaggg 236
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| |||||| ||| ||||||||||| |||||||| |||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacattgaacaaaaagtcaacagcgtcatagattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||||||||||||||||||||||| |||||| || || | |||||| || ||||| |
Sbjct: 236 ccctccgtattttaatgtatgacgccgttgactattcgaccaacgtttgaccatttgttt 177
Query: 64 tatt 67
||||
Sbjct: 176 tatt 173
>RF01058;MIR806;AP008216.1/17619587-17619826 39947:Oryza sativa
Japonica Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 195/233 (83%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||| ||||| | | |||||| | ||||||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgattttttgtccaacgtttgactgtttgtctt 66
Query: 65 att--aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 67 attcaaaaaaaattatgtaattatcatttattttattgtgacttgattcatcatcaaatg 126
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
| |||||||||||||||| ||||| |||| || || ||||| | |||||
Sbjct: 127 ctatttaagcatgacataaacattttcatattttca-caaaaaattaaataaaacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gtcaaacatt-gctaaaaagtcaacggcgtcatacattaaaatacggagggag 237
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttta 41
|||||||||||||||||||||||||| |||||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccgttgacttttta 198
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
||||||||||| ||||| |||||||||||||||||||||||| |||||
Sbjct: 55 tcaaacgttggacaaaaaatcaacggcgtcatacattaaaatatggagg 7
>RF01058;MIR806;AAAA02011654.1/10391-10151 39946:Oryza sativa Indica
Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 188/226 (83%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||| ||||||||||| |||| ||||| | | |||||| || ||||||||||| |
Sbjct: 13 tattttactgtatgacgccgttgatttttttatcaacgtttgaccatttgtcttatttaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
||| || ||||||||||||||||||||||| | ||||||||||||||||||| | ||||
Sbjct: 73 aaactttatgtaattatcatttattttattatggcttgatttatcatcaaatgatattta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|||||||||||| |||||||| ||||||| || ||||| | || || | ||||
Sbjct: 133 agcatgacataaatatttttgtatttgcacaaaaattttaaataaaacgattggttaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| ||||||||||| | ||||||||||||||||| |||||||
Sbjct: 193 gttggtcaaaaagtcaacagtgtcatacattaaaatacagagggag 238
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| |||| |||||||||| | ||||| |||||||||||||||| ||||||| |
Sbjct: 69 aataagacaaatggtcaaacgttgataaaaaaatcaacggcgtcatacagtaaaatatga 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
>RF01058;MIR806;AACV01011144.1/52651-52410 39947:Oryza sativa
Japonica Group
Length = 242
Score = 159 bits (80), Expect = 2e-38
Identities = 164/194 (84%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 43 caancgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgt 101
||| |||||| || || |||||||| | |||||| ||||||||| |||||||||||||||
Sbjct: 46 caaacgtttgacccttcgtcttattcaaaaaatttatgtaattaacatttattttattgt 105
Query: 102 nacttgatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnn 161
|||||||| |||||||||| ||||||||||||||||||| |||||| |||||||
Sbjct: 106 gacttgattcatcatcaaatattctttaagcatgacataaatattttcatatttgcacaa 165
Query: 162 nnnnnttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacatta 221
|||||||| ||||||| |||||||||| | ||||||||| ||||||||| ||||
Sbjct: 166 aaattttgaataaaatgaatggtcaaacgttgatcgaaaagtcaaaggcgtcataaatta 225
Query: 222 aaatacggagggag 235
||||||||||||||
Sbjct: 226 aaatacggagggag 239
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||| ||||||||| |||||||||
Sbjct: 237 ccctccgtattttaatttatgacgcctttgactttt 202
>RF01058;MIR806;AC210492.2/18659-18900 4538:Oryza glaberrima
(African rice)
Length = 242
Score = 157 bits (79), Expect = 8e-38
Identities = 191/228 (83%), Gaps = 4/228 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaa-caancgtttgnccttttgtct 63
||||| ||||||||||||||||||| || ||||||| | | | |||||| || || ||||
Sbjct: 9 cctccatattttaatgtatgacgccgttaacttttttatctaacgtttgaccattcgtct 68
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | ||| || |||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct: 69 tattcaaaaagtttatgtaactatcatttattttattgtaacttgattcatcatcaaatg 128
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
| |||||| |||||||| |||||| ||||||| |||||||||| |||||
Sbjct: 129 t--tttaaggatgacatagatattttcatatttgcacaaaaattttgaataagacgaatg 186
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 187 gtcaaacgttggtcgaaaagtcaacggcgtcatacattaaaatacgga 234
Score = 69.9 bits (35), Expect = 2e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaa-gtcaacggcgtcatacattaaaat 225
|||||||||| ||||| ||||||||| | |||||| || |||||||||||||||||||||
Sbjct: 75 ttgaataagacgaatggtcaaacgttagataaaaaagttaacggcgtcatacattaaaat 16
Query: 226 acggagg 232
| |||||
Sbjct: 15 atggagg 9
Score = 61.9 bits (31), Expect = 4e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 7 tccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttat 66
||||||||||||||||||||||| ||||||||| || | |||||| || || |||||||
Sbjct: 234 tccgtattttaatgtatgacgccgttgacttttcgaccaacgtttgaccattcgtcttat 175
Query: 67 t 67
|
Sbjct: 174 t 174
>RF01058;MIR806;AL606601.3/29448-29687 39947:Oryza sativa Japonica
Group
Length = 240
Score = 157 bits (79), Expect = 8e-38
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
|||||||||| | |||||| |||||||||| | | |||||| || || |||||||||
Sbjct: 13 tattttaatgcacgacgccgttgactttttgtccaacgtttgaccattcatcttattaaa 72
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||| ||||||| ||||| ||||||| | || |||||||| ||||| ||||||||||||
Sbjct: 73 aaaaatatgtaactatcaattattttgtggtgacttgattcgtcatcgaatgttctttaa 132
Query: 131 gcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacg 190
||||||||||| |||||| ||||||| |||||||| | ||||| |||||||
Sbjct: 133 gcatgacataaatattttgatatttgcagaaaaattttgaataaaacgaatggtcaaacg 192
Query: 191 ttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 193 ttggtcgaaaagtcaacggcgtcatacattaaaatatggagggag 237
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||| |
Sbjct: 69 aataagatgaatggtcaaacgttggacaaaaagtcaacggcgtcgtgcattaaaatatag 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||| ||||||||||||||||||| |||||||||
Sbjct: 235 ccctccatattttaatgtatgacgccgttgactttt 200
>RF01058;MIR806;AACV01025382.1/7665-7425 39947:Oryza sativa Japonica
Group
Length = 241
Score = 157 bits (79), Expect = 8e-38
Identities = 193/233 (82%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||| |||||||| || ||||||||| | |||||| || || ||||
Sbjct: 6 ccctccatattttaatatatgacgcagttaactttttaatcaacgtttgaccattcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 66 tattcaaaaaatttatgtaattatcatttattttattgtggcttgatttattatcaaata 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||||||| || |||||| ||||||| |||| | |||||||||| |||||
Sbjct: 126 ttctttaagtataacataaatatttttatatttaaacaaaaaatttgaataagacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| | || ||||||||| |||||||||||||||||||||||||
Sbjct: 186 gtcaaacgttgttcgaagagtcaacggtgtcatacattaaaatacggagggag 238
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgact 36
||||||||||||||||||||||| || ||||||
Sbjct: 236 ccctccgtattttaatgtatgacaccgttgact 204
>RF01062;MIR812;AAAA02032459.1/15536-15706 39946:Oryza sativa Indica
Group
Length = 171
Score = 155 bits (78), Expect = 3e-37
Identities = 136/157 (86%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 49 tttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnacttg 107
|||| ||||| |||||||| | |||||| |||||||||| |||||||||||||| |||||
Sbjct: 157 tttgacctttcgtcttattcaaaaaatttatgtaattataatttattttattgtgacttg 98
Query: 108 atttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnt 167
|||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 97 atttatcatcaaatgttctttaagcatgacataagtatttttatatttgcataaaatttt 38
Query: 168 tgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||| | || || |||||||||||||||||||||
Sbjct: 37 tgaatataacgagtggtcaaacgttggttaaaaagtc 1
>RF01062;MIR812;AAAA02027573.1/25196-25026 39946:Oryza sativa Indica
Group
Length = 171
Score = 155 bits (78), Expect = 3e-37
Identities = 141/164 (85%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 35 ctttttaacaancgtttgnccttttgtcttattaacaaaat-tatgtaattatcatttat 93
|||||||| || |||||| ||||| |||||||||| ||||| ||||||||||| ||||||
Sbjct: 171 ctttttaataaacgtttgacctttcgtcttattaaaaaaatatatgtaattataatttat 112
Query: 94 tttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgcat 153
|||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||
Sbjct: 111 tttattgtgacttgatttatcattaaatgttctttaagcatgacataaatatttttatat 52
Query: 154 ttgcatnnnnnnnttgaataagatgaatgatcaaacgttggtta 197
|| ||| || ||||||| ||||| ||||||||||||||
Sbjct: 51 ttacataaaaattttaaataagacgaatggtcaaacgttggtta 8
>RF01058;MIR806;CR855028.1/1572-1812 4530:Oryza sativa (rice)
Length = 241
Score = 155 bits (78), Expect = 3e-37
Identities = 192/232 (82%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||||||||| | ||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgactttttgtccgatgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | ||| || ||||||||||||||||||||||| | ||||||||| ||||||||| |
Sbjct: 67 atttaaaaagtttatgtaattatcatttattttattataacttgatttgtcatcaaatat 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
| ||||| |||||||||| ||||||| |||||||| |||||||| || ||||
Sbjct: 127 tttttaaacatgacataaatatttttatatttgcataaatattttgaataaaataaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| | ||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 187 tcaaacgttgatcgaaaagtcaacgacgtcatatattaaaatacggaaggag 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||| | || |||||||||||||||||||||||||||||| ||
Sbjct: 69 aataagacgaatggtcaaacatcggacaaaaagtcaacggcgtcatacattaaaatatgg 10
Query: 230 agg 232
|||
Sbjct: 9 agg 7
>RF01058;MIR806;AAAA02003280.1/16515-16755 39946:Oryza sativa Indica
Group
Length = 241
Score = 155 bits (78), Expect = 3e-37
Identities = 192/232 (82%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||| | ||||||||| | | |||||| || || || ||
Sbjct: 7 cctccatattttaatgtatgacgtcgttgacttttagtccaacgtttgaccattcgtttt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| |||||||||||||||||||||||| |||||||| ||||| |||| |
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttattgggacttgattcatcattaaatat 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||||| |||| ||||||| |||| ||| |||||||| | |||||
Sbjct: 127 tctttaagcatgatataaatatttttatattttcataaaaattttgaataaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| |||||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 187 tcaaacattggttaaaaagtcaatagcatcatacattaaaatatggagggag 238
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 72 ttgaataaaacgaatggtcaaacgttggactaaaagtcaacgacgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaac 43
|||||| ||||||||||||||| || ||||||||||||||
Sbjct: 236 ccctccatattttaatgtatgatgctattgactttttaac 197
>RF01058;MIR806;AAAA02004771.1/10700-10939 39946:Oryza sativa Indica
Group
Length = 240
Score = 155 bits (78), Expect = 3e-37
Identities = 193/232 (83%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| ||||||||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgactttttatccaacgtttgaccattcgtctt 66
Query: 65 attaacaaaat-tatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | ||| | ||||||||| || ||| ||||||||| ||| |||| ||||||||||||
Sbjct: 67 attcaaaaagtgtatgtaattgtctttt-ttttattgtgactagattcatcatcaaatgt 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||||| || | ||||||| ||||||| |||||||| | |||
Sbjct: 126 tctttaagcatgatattaatatttttatatttgcacaaaatttttgaataaaacaaatag 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tcaaacgttgatcgaaaagtcaacggcgtcatacattaaaatacggagggag 237
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggataaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||||||||||||| |||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccgttgactttt 200
>RF01058;MIR806;AACV01022624.1/5519-5760 39947:Oryza sativa Japonica
Group
Length = 242
Score = 153 bits (77), Expect = 1e-36
Identities = 141/165 (85%)
Strand = Plus / Plus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||
Sbjct: 75 aaaattatgtaattgtcatttattttattgtgacttgattcatcatcaaatattctttat 134
Query: 131 gcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacg 190
|||||||||| |||||| |||||||| || |||||| ||||| |||||||
Sbjct: 135 acatgacataaaaatttttatatttgcataaaaattttaaataaggcgaatggtcaaacg 194
Query: 191 ttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 195 ttagtcaaaaagtcaacggcatcatacattaaaatacggagggag 239
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||| ||||| || | ||||||||||||| |||||||| |||||||
Sbjct: 72 ttgaataagatgaatggtcaaatgtcgaagaaaaagtcaacggtgtcatacaataaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||||||||| ||| |||||||||| || | ||||||
Sbjct: 237 ccctccgtattttaatgtatgatgccgttgactttttgactaacgtttg 189
>RF01058;MIR806;AACV01010810.1/28360-28121 39947:Oryza sativa
Japonica Group
Length = 240
Score = 153 bits (77), Expect = 1e-36
Identities = 190/231 (82%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||| | ||||||||||| | | | ||| | || |||||
Sbjct: 7 cctccatattttaatgtatgacgtcgttgactttttatctaacatttaactattcgtctt 66
Query: 65 attaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgtt 124
||||| |||||||| |||||||| ||||||||| || |||||||| |||||||||||||
Sbjct: 67 attaaaaaaattatataattatcgtttattttaccgtgacttgattcatcatcaaatgtt 126
Query: 125 ctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgat 184
||||||||| | |||| |||||| |||| || || ||||| | ||||| |
Sbjct: 127 ctttaagcacaatataaatattttcatatttacacaaaaaatttaaataaaacgaatggt 186
Query: 185 caaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 187 caaacgttgattaaaaagtcaatggcgtcatacattaaaatacggagggag 237
Score = 77.8 bits (39), Expect = 6e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
|||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccattgactttttaa 197
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 196 taaaaagtcaacggcgtcatacattaaaatacggagg 232
||||||||||||| ||||||||||||||||| |||||
Sbjct: 43 taaaaagtcaacgacgtcatacattaaaatatggagg 7
>RF01058;MIR806;AL732379.5/11764-11525 4530:Oryza sativa (rice)
Length = 240
Score = 151 bits (76), Expect = 5e-36
Identities = 188/226 (83%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| |||||||||| || | |||||| || || || ||||| |
Sbjct: 13 tattttaatgtatgacgccgttgactttttgactaacgtttgaccattcgttttattcaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|| ||| |||||||||| ||| |||||||||| |||||||||||||||||||||| | ||
Sbjct: 73 aagatttatgtaattattatt-attttattgtgacttgatttatcatcaaatgttttata 131
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|| ||||||||| | ||||| ||||||| |||||||||| ||||||| ||||
Sbjct: 132 agtatgacataattttttttatatttgcacaaaagaattgaataagacgaatgattaaac 191
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 192 gttggtcaaaaagtcaacggcatcgtatcttaaaatacggtgggag 237
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||||| ||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataaaacgaatggtcaaacgttagtcaaaaagtcaacggcgtcatacattaaaata 13
>RF01058;MIR806;AP008214.1/9553050-9553290 39947:Oryza sativa
Japonica Group
Length = 241
Score = 151 bits (76), Expect = 5e-36
Identities = 187/226 (82%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
|||||||||||||||| || |||||||||| | | ||||| | || |||||||| |
Sbjct: 13 tattttaatgtatgacaccgttgactttttgtccaatgtttgactattcgtcttatttaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
||| || |||||||||||||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 73 aaagtttatgtaattatcatttattctattgtgacttgattaatcatcaaatgttcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||| |||||||| |||||| |||| ||| || ||||| | ||||| ||||||
Sbjct: 133 agcttgacataaatattttcatattttcataaaaattttaaataaaacgaatggtcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| | |||||||||||||||||||||||||||||| |||||||
Sbjct: 193 gttgttcaaaaagtcaacggcgtcatacattaaaatatagagggag 238
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
||||||| |||| |||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 69 aataagacgaatagtcaaacattggacaaaaagtcaacggtgtcatacattaaaata 13
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 11 tattttaatgtatgacgccattgacttttt 40
||||||||||||||||||| ||||||||||
Sbjct: 229 tattttaatgtatgacgccgttgacttttt 200
>RF01062;MIR812;AAAA02037866.1/4033-4206 39946:Oryza sativa Indica
Group
Length = 174
Score = 147 bits (74), Expect = 8e-35
Identities = 105/115 (91%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 36 tttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttatt 94
||||| |||| |||||| ||||| |||||||| | |||||| |||||||||| |||||||
Sbjct: 171 ttttttacaaacgtttgacctttcgtcttatttaaaaaatttatgtaattataatttatt 112
Query: 95 ttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 111 ttattgtaacttgatttatcatcaaatgttctttaagcatgacataaatattttt 57
>RF01062;MIR812;AAAA02028395.1/919-747 39946:Oryza sativa Indica
Group
Length = 173
Score = 147 bits (74), Expect = 8e-35
Identities = 111/126 (88%)
Strand = Plus / Minus
Query: 76 tatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatg 135
||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 129 tatgtaattataatttattttattgtgacttgatttatcattaaatgttctttaagcatg 70
Query: 136 acataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttggt 195
|||||||||||||| ||||| || ||||||||||||| || ||||||||||||
Sbjct: 69 acataagtatttttatatttgtataaaaattttgaataagatgagtggtcaaacgttggt 10
Query: 196 taaaaa 201
||||||
Sbjct: 9 taaaaa 4
>RF01062;MIR812;AAAA02041948.1/2219-2054 39946:Oryza sativa Indica
Group
Length = 166
Score = 147 bits (74), Expect = 8e-35
Identities = 108/119 (90%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 42 acaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattg 100
|||| |||||| | ||| |||||||| | |||||| |||||||||| |||||||||||||
Sbjct: 162 acaaacgtttgacttttcgtcttattcaaaaaatttatgtaattataatttattttattg 103
Query: 101 tnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcat 159
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 102 tgacttgatttatcatcaaatgttctttaagcatgacataagtatttttatatttgcat 44
>RF01058;MIR806;AP005840.4/43971-44215 39947:Oryza sativa Japonica
Group
Length = 245
Score = 147 bits (74), Expect = 8e-35
Identities = 182/220 (82%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||| | |||||||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgtcgttgactttttgtctaacgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| |||||||| |||||||||||||||| |||||||| || |||||||||
Sbjct: 67 attcaaaaaatttatgtaattgtcatttattttattgtgacttgattcattatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||||||||| ||||||| ||||| | |||||| | | |||||
Sbjct: 127 tctttaagcatgacataaatatttttatatttgtacaaaatttttgaatgaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaa 223
| ||| |||||| |||||||||||| ||| ||||||||||
Sbjct: 187 ttaaatgttggtcaaaaagtcaacgacgttatacattaaa 226
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttagacaaaaagtcaacgacgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
>RF01058;MIR806;AP006451.3/6041-6280 39947:Oryza sativa Japonica
Group
Length = 240
Score = 147 bits (74), Expect = 8e-35
Identities = 192/232 (82%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||||||||| | | | || | | || |||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgactttttgtctaacattagactattcgtctt 66
Query: 65 attaacaa-aattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| || ||||||||||||||||||||||||||||| |||||||| |||| ||||| |
Sbjct: 67 attcgaaacaattatgtaattatcatttattttattgtgacttgattcatcaccaaatat 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||| ||||| || |||| ||||| || |||||||| | ||||
Sbjct: 127 tctttaagcatggcataaata-ttttatatttggataaaaattttgaataaaacgaatag 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||| |||| |||| ||||||||||||||||||||||||||||
Sbjct: 186 tcaaacgttggttgaaaaatcaatggcgtcatacattaaaatacggagggag 237
Score = 67.9 bits (34), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||||||||||||||| |||| ||| | ||||||
Sbjct: 235 ccctccgtattttaatgtatgacgccattgatttttcaaccaacgtttg 187
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 197 aaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||||||||||||||||||||||||||| |||||
Sbjct: 42 aaaaagtcaacggcgtcatacattaaaatatggagg 7
>RF01062;MIR812;AP004342.5/89061-89234 39947:Oryza sativa Japonica
Group
Length = 174
Score = 145 bits (73), Expect = 3e-34
Identities = 145/170 (85%), Gaps = 3/170 (1%)
Strand = Plus / Minus
Query: 37 ttttaacaancgtttgnccttttgtcttattaacaaaa--ttatgtaattatcatttatt 94
||||||||| |||||| ||||| || ||||||| |||| |||||||||||| |||||||
Sbjct: 169 ttttaacaaacgtttgacctttcgttttattaaaaaaaaattatgtaattat-atttatt 111
Query: 95 ttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgcatt 154
||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||
Sbjct: 110 ttattgtgacttgatttatcatgaaatgttctttacgcatgacataagtatttttatatt 51
Query: 155 tgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtc 204
| || |||||||||| || || |||||||||||||||||||||
Sbjct: 50 tatataaaatttttgaataagacgagtggtcaaacgttggttaaaaagtc 1
>RF01062;MIR812;AP005869.3/131391-131213 39947:Oryza sativa Japonica
Group
Length = 179
Score = 145 bits (73), Expect = 3e-34
Identities = 107/118 (90%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| |||| |||||| ||||| |||||||| | |||||| || ||||||| ||||
Sbjct: 179 gactttttgacaaacgtttgacctttcgtcttatttaaaaaatttatataattataattt 120
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 119 attttattgtgacttgatttattatcaaatgttctttaagcatgacataagtattttt 62
>RF01058;MIR806;AAAA02035058.1/11624-11864 39946:Oryza sativa Indica
Group
Length = 241
Score = 145 bits (73), Expect = 3e-34
Identities = 128/146 (87%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||||||||||||||||||||||| |||| |||||| | | |||||| | || |||||
Sbjct: 7 cctccgtattttaatgtatgacgccgttgattttttatccaacgtttgatcattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||| | | |||||| |||||||||||
Sbjct: 67 atttaaaaaatttatgtaattatcatttattttattatgagttgattcgtcatcaaatgt 126
Query: 124 tctttaagcatgacataagtattttt 149
|||||||||||||||||| |||||||
Sbjct: 127 tctttaagcatgacataactattttt 152
Score = 101 bits (51), Expect = 4e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 aataagacgaatgatcaaacgttggataaaaaatcaacggcgtcatacattaaaatacgg 10
Query: 230 agg 232
|||
Sbjct: 9 agg 7
>RF01058;MIR806;AL713901.3/92479-92719 4530:Oryza sativa (rice)
Length = 241
Score = 145 bits (73), Expect = 3e-34
Identities = 184/223 (82%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta-ttaa 69
|||||||||| |||||||| ||||||||||| | |||||| | || |||||| ||||
Sbjct: 13 tattttaatggatgacgccgttgactttttattcaacgtttgactattcgtcttatttaa 72
Query: 70 caaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||
Sbjct: 73 aaagtttatgtaattatcatttattttattgtgacttgattcgttatcaaatgttcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|||||||||| | ||||| |||||| | |||||||| | ||||| ||||||
Sbjct: 133 agcatgacattaatatttccatatttgcgtaaaaattttgaataaaacgaatggtcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 193 gttggtcgaaaagtcaatggcatcatacattaaaatacggagg 235
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 69 aataagacgaatagtcaaacgttgaataaaaagtcaacggcgtcatccattaaaata 13
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgactttt 39
||||||||||||||||||||| |||||||||||||
Sbjct: 235 cctccgtattttaatgtatgatgccattgactttt 201
>RF01058;MIR806;AP008214.1/20176915-20176675 39947:Oryza sativa
Japonica Group
Length = 241
Score = 145 bits (73), Expect = 3e-34
Identities = 189/227 (83%), Gaps = 3/227 (1%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||||| |||||||| | | | |||||| || || ||||||||||
Sbjct: 13 tattttaatgtatgacgccgttgactttgtgtccaacgtttgaccattcgtcttattaaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| |||||||| ||||||||||||||| |||||||| || |||||||||| ||||
Sbjct: 73 aaaatttatgtaattgccatttattttattgtgacttgattcattatcaaatgtttttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||||| ||||| ||||| | ||||||| || ||||| | ||||| ||||||
Sbjct: 133 agcataacatatatatttctatatttgca-aaataatttaaataaaacgaatggtcaaac 191
Query: 190 gttggt-taaaaagtcaacggcgtcatacattaaaatacggagggag 235
||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gttagtaaaaaaagtcaacggcgtcatacattaaaatacggagggag 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacgttggacacaaagtcaacggcgtcatacattaaaata 13
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||||||||||||| ||||||||||
Sbjct: 236 ccctccgtattttaatgtatgacgccgttgacttttt 200
>RF01058;MIR806;AAAA02030270.1/77362-77596 39946:Oryza sativa Indica
Group
Length = 235
Score = 145 bits (73), Expect = 3e-34
Identities = 188/229 (82%), Gaps = 9/229 (3%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||||||||| |||||||| |||||||||| ||| || || || |
Sbjct: 6 ccctccgtattttaatgcatgacgccgttgactttttc--------ttgaccattcgttt 57
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||||| |||||| ||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 58 tattaaaaaaatttatgtaattatcatttattttattgtgacttaatttaccatcaaatg 117
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||| |||||||||| |||||| |||| || |||||||| | ||||
Sbjct: 118 ttctttaaacatgacataaatattttcatatttacacaaaaaatttgaataaaacgaata 177
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
| |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 178 gttaaacgttggttaaaaagtcaacggcgtcatacgttgaaatacggag 226
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 197 aaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||||||||||| |||||||||||||||||||
Sbjct: 42 aaaaagtcaacggcgtcatgcattaaaatacggagggag 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgttt 51
|||||||||| || |||||||||| ||||||||||||| | |||||
Sbjct: 226 ctccgtatttcaacgtatgacgccgttgactttttaaccaacgttt 181
>RF01062;MIR812;AAAA02033797.1/37042-37214 39946:Oryza sativa Indica
Group
Length = 173
Score = 143 bits (72), Expect = 1e-33
Identities = 136/159 (85%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| ||||| || ||||| | |||||| || ||||||| |||||||||||| | |||
Sbjct: 159 cgtttgacctttcgttttatttaaaaaatttatataattataatttattttattatgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnnn 165
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 99 tgatttatcatcaaatgttctttaagtatgacataagtatttttatatttgcataaaaat 40
Query: 166 nttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||| |||||||||||||| ||||||
Sbjct: 39 tttgaataagacgaatggtcaaacgttggttataaagtc 1
>RF01062;MIR812;AP008215.1/12412383-12412555 39947:Oryza sativa
Japonica Group
Length = 173
Score = 143 bits (72), Expect = 1e-33
Identities = 138/162 (85%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| | || |||||| | ||| |||||||| | |||||| |||||||||| ||||
Sbjct: 173 gactttttgataaacgtttgacatttcgtcttattcaaaaaatttatgtaattattattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 113 attttattgtgacttgatttatcatcaaatgttctttaagtatgacataagtatttttat 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttg 193
||||| || |||||||||| ||||| ||||||||||
Sbjct: 53 atttgtataaaaaatttgaataagacgaatggtcaaacgttg 12
>RF01062;MIR812;AC145367.2/72736-72907 39947:Oryza sativa Japonica
Group
Length = 172
Score = 143 bits (72), Expect = 1e-33
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaattatgtaattatcatttattttattgtnactt 106
|||||| || || |||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 158 cgtttgaccattcgtcttattaaaaaaattatgtaattatcatttattttattgtgactt 99
Query: 107 gatttatcatcaaatgttctttaagcatgacataagtatttt 148
||||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 98 gatttatcatcaaatgttctttaagaatgtcataaatatttt 57
>RF01062;MIR812;AACV01023720.1/2532-2702 39947:Oryza sativa Japonica
Group
Length = 171
Score = 143 bits (72), Expect = 1e-33
Identities = 117/134 (87%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 131 aaaattatgtaattataatttattttattgtgacttgatttatcatcaaatgttctttaa 72
Query: 131 gcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacg 190
|||||||||| |||||| |||||||| |||||||||| || || |||||||
Sbjct: 71 gcatgacata---atttttatatttgcataaatattttgaataagacgagtggtcaaacg 15
Query: 191 ttggttaaaaagtc 204
||||||||||||||
Sbjct: 14 ttggttaaaaagtc 1
>RF01062;MIR812;AAAA02002748.1/3908-4080 39946:Oryza sativa Indica
Group
Length = 173
Score = 143 bits (72), Expect = 1e-33
Identities = 131/152 (86%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 54 ccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnacttgattta 112
|||||| ||||||| | |||||| |||||| |||||||||||||||||| ||||||||||
Sbjct: 152 ccttttatcttattcaaaaaatttatgtaaatatcatttattttattgtgacttgattta 93
Query: 113 tcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaat 172
|||| |||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 92 tcattaaatgttctttaagcatgtcataagtatttttatatttgcataaaaaatttgaat 33
Query: 173 aagatgaatgatcaaacgttggttaaaaagtc 204
|| | ||||| ||||| |||||||||||||||
Sbjct: 32 aaaacgaatggtcaaatgttggttaaaaagtc 1
>RF01058;MIR806;AAAA02005666.1/25598-25367 39946:Oryza sativa Indica
Group
Length = 232
Score = 143 bits (72), Expect = 1e-33
Identities = 186/230 (80%), Gaps = 18/230 (7%)
Strand = Plus / Plus
Query: 7 tccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttat 66
||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||
Sbjct: 17 tccgtattttaatgtatgacgccgttgactttttaacaaacgtttgatctttcgtcttat 76
Query: 67 t-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
| || ||| |||| ||||||| |||||||||||||| |||| |||||| |||||||||||
Sbjct: 77 tcaaaaaatttatataattataatttattttattgtgacttaatttattatcaaatgttc 136
Query: 126 tttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatc 185
||||||| |||||||| |||||||||| || || ||
Sbjct: 137 -----------------tatttttatatttgcataaaaattttgaataagacgagtggtc 179
Query: 186 aaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 180 aaacgttgattaaaaagtcaacggtgtcatacattaaaatacggagggag 229
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 80 ttgaataagacgaaagatcaaacgtttgttaaaaagtcaacggcgtcatacattaaaata 21
Query: 227 cgga 230
||||
Sbjct: 20 cgga 17
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
||||||||||||||||||||||| || ||||||||||||
Sbjct: 227 ccctccgtattttaatgtatgacaccgttgactttttaa 189
>RF01058;MIR806;AC103551.7/8791-8550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 143 bits (72), Expect = 1e-33
Identities = 127/145 (87%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||| ||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgattttttgtccaacgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||| ||| |||||||| ||| ||||||||
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttactgtgacttgattcatcgtcaaatgt 126
Query: 124 tctttaagcatgacataagtatttt 148
|||||||||||||||||| ||||||
Sbjct: 127 tctttaagcatgacataaatatttt 151
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggacaaaaaatcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 tattttaatgtatgacgccattgacttttt 40
|||||||||||||||| || ||||||||||
Sbjct: 230 tattttaatgtatgacaccgttgacttttt 201
>RF01058;MIR806;AP004191.3/96014-96255 39947:Oryza sativa Japonica
Group
Length = 242
Score = 143 bits (72), Expect = 1e-33
Identities = 187/226 (82%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 12 attttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaaca 71
|||||||||||||||||||||||||||||| | | |||||| || || |||||||||| |
Sbjct: 14 attttaatgtatgacgccattgactttttatccaacgtttgaccattcgtcttattaaaa 73
Query: 72 aaa-ttatgtaattatcatttattttattgtnacttgatttatcatcaaatg-ttcttta 129
||| |||| ||||||||||||||||||||| ||| |||| ||||||||||| || ||||
Sbjct: 74 aaatttatacaattatcatttattttattgtaactcgattcatcatcaaatgttttttta 133
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||||||| |||| || ||| ||||| | |||||||| | |||| ||||||
Sbjct: 134 agcatgatataaatactttcatatttgtacgaaaattttgaataaaacgaatagtcaaac 193
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||| || ||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 194 gttagtcaaaaagtcaacggtgtcatacattagaatacagagggag 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 69 aataagacgaatggtcaaacgttggataaaaagtcaatggcgtcatacattaaaatgtgg 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 44.1 bits (22), Expect = 9e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||| ||||| ||||||||||| || |||||||||| || | ||||||
Sbjct: 237 ccctctgtattctaatgtatgacaccgttgactttttgactaacgtttg 189
>RF01058;MIR806;AP001552.1/4848-4606 39947:Oryza sativa Japonica
Group
Length = 243
Score = 143 bits (72), Expect = 1e-33
Identities = 187/228 (82%), Gaps = 3/228 (1%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||| ||||||||||| | | |||||| || || |||||||| |
Sbjct: 13 tattttaatgtatgacgttgttgactttttatctaacgtttgaccattcgtcttattcaa 72
Query: 71 aaaa---ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctt 127
|||| |||||||||||||||||| |||||| | | || ||| |||||||||||||||
Sbjct: 73 aaaaaatttatgtaattatcatttactttattataagtttattcgtcatcaaatgttctt 132
Query: 128 taagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaa 187
|||||||||||||| ||||||| ||||||| |||||||| | ||||| ||||
Sbjct: 133 taagcatgacataaatatttttatatttgcacagaaattttgaataaaacgaatggtcaa 192
Query: 188 acgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||| || || |||||||||||| |||||||||||||||| | ||||||
Sbjct: 193 acggtgattgaaaagtcaacggtgtcatacattaaaatatgaagggag 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttagataaaaagtcaacaacgtcatacattaaaata 13
>RF01062;MIR812;AACV01025605.1/1442-1257 39947:Oryza sativa Japonica
Group
Length = 186
Score = 141 bits (71), Expect = 5e-33
Identities = 111/127 (87%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattgtgatttgatttatcatgaaatgttctttaagcat 71
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|||||||| ||||||| |||||||| || ||||||| |||| |||||||||||
Sbjct: 70 gacataagcatttttgtatttgcataaaaattttaaataagacaaatggtcaaacgttgg 11
Query: 195 ttaaaaa 201
|||||||
Sbjct: 10 ttaaaaa 4
>RF01062;MIR812;AC139174.3/51963-52134 39947:Oryza sativa Japonica
Group
Length = 172
Score = 141 bits (71), Expect = 5e-33
Identities = 143/169 (84%), Gaps = 1/169 (0%)
Strand = Plus / Minus
Query: 36 tttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttatt 94
|||||||||| |||||| || || ||||||| | |||||| |||||||||| |||||||
Sbjct: 169 tttttaacaaacgtttgaccattcatcttattcaaaaaatttatgtaattataatttatt 110
Query: 95 ttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgcatt 154
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 109 ttattgtgacttgatttctcatcaaatgttctttaagcatgacataagtatttttatatt 50
Query: 155 tgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagt 203
| ||| |||||||||| | || |||||||||| |||||||||
Sbjct: 49 tacataaaaattttgaataagacaagtggtcaaacgttgattaaaaagt 1
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaa 201
|||||||||||||||| ||||||||| ||||||||
Sbjct: 135 ttgaataagatgaatggtcaaacgtttgttaaaaa 169
>RF01062;MIR812;AP005156.4/10500-10672 39947:Oryza sativa Japonica
Group
Length = 173
Score = 141 bits (71), Expect = 5e-33
Identities = 146/173 (84%), Gaps = 1/173 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| |||| ||||| ||||| |||||||| | ||| || || ||||||| ||||
Sbjct: 173 gactttttgacaaacgtttaacctttcgtcttattcaaaaactttatataattataattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 113 attttattgtgacttgatttatcatcaaatgttctttaagcatgatataagtatttttat 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||| || ||||||| || | |||||||||||||||||||||
Sbjct: 53 atttgcataaaatttttaaataagacgagttgtcaaacgttggttaaaaagtc 1
>RF01058;MIR806;AAAA02033022.1/35037-35277 39946:Oryza sativa Indica
Group
Length = 241
Score = 141 bits (71), Expect = 5e-33
Identities = 186/225 (82%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| ||||||||||||||||||| |||| ||||| | | |||||| || || ||||||
Sbjct: 8 ctccatattttaatgtatgacgccgttgaaattttatccaacgtttgaccattcgtctta 67
Query: 66 ttaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgtt 124
|| | |||||| ||||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 68 ttcaaaaaatttatgtaattatcatttattttattatgacttgattcgtcatcaaatgtt 127
Query: 125 ctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgat 184
||||||||||| |||| |||||| ||||| || |||||||| | ||||| |
Sbjct: 128 ttttaagcatgatataaatattttcatatttgtataaaatttttgaataaaacgaatggt 187
Query: 185 caaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
| |||||| ||| ||||||||||||||||| |||||| |||||||
Sbjct: 188 c-aacgttagttgaaaagtcaacggcgtcaaacattagaatacgg 231
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggataaaatttcaacggcgtcatacattaaaata 13
Query: 227 cggag 231
||||
Sbjct: 12 tggag 8
>RF01058;MIR806;AAAA02034678.1/25108-25338 39946:Oryza sativa Indica
Group
Length = 231
Score = 141 bits (71), Expect = 5e-33
Identities = 188/229 (82%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||||||||||||||||||||| | || ||||||| | | |||||| || ||||
Sbjct: 2 cctccgtattttaatgtatgacgtcgttaactttttgtccaacgtttgattattcatctt 61
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| |||||||| |||||||||||| || ||||| || | ||||||| |
Sbjct: 62 attcaaaaaatttatgtaattgtcatttattttaccgtgacttgtttcgttatcaaatat 121
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||||||||| |||||| |||| ||| |||||||| | ||||||
Sbjct: 122 tctttaagcatgacataaatattttcatatttacataaaaaaattgaataaaacgaatga 181
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 182 tcaaacgttggtcaaaaggtcaacggcgtcatacattaaaatacggagg 230
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||
Sbjct: 67 ttgaataagatgaataatcaaacgttggacaaaaagttaacgacgtcatacattaaaata 8
Query: 227 cggagg 232
||||||
Sbjct: 7 cggagg 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||||||||||||||||| ||||| |||| || | ||||||
Sbjct: 230 cctccgtattttaatgtatgacgccgttgaccttttgaccaacgtttg 183
>RF01062;MIR812;AP004462.3/14288-14459 39947:Oryza sativa Japonica
Group
Length = 172
Score = 139 bits (70), Expect = 2e-32
Identities = 113/130 (86%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130 ttatgtaattatcatttgttttattgtgacttgatttatcatcaaatgttctttaagcat 71
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
||||||| ||| ||| |||||||| || ||||||| ||||| ||||||||||
Sbjct: 70 gacataaatatgtttatatttgcataaaaattttaaataagacgaatggtcaaacgttga 11
Query: 195 ttaaaaagtc 204
||||||||||
Sbjct: 10 ttaaaaagtc 1
>RF01062;MIR812;AACV01015082.1/860-1031 39947:Oryza sativa Japonica
Group
Length = 172
Score = 139 bits (70), Expect = 2e-32
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 49 tttgnccttttgtcttattaacaaaattatgtaattatcatttattttattgtnacttga 108
|||| || ||||||||||| | ||| |||||||||||| |||||||||||||| ||||||
Sbjct: 156 tttgaccatttgtcttattcaaaaatttatgtaattattatttattttattgtgacttga 97
Query: 109 tttatcatcaaatgttctttaagcatgacataagtatttt 148
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96 tttatcatcaaatgttctttaagcatgacataaatatttt 57
>RF01058;MIR806;AP008213.1/9527220-9527460 39947:Oryza sativa
Japonica Group
Length = 241
Score = 139 bits (70), Expect = 2e-32
Identities = 190/232 (81%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||| |||||| ||||||||||||||||| | |||||| || || |||||
Sbjct: 7 cctccatatttaaatgtacgacgccattgactttttgttcaacgtttgaccattcgtctt 66
Query: 65 att-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| || |||| ||||||||||| |||||||||||||| || ||| ||||||||| |
Sbjct: 67 atttaaaaaaaatatgtaattattatttattttattgtagtttaattcgtcatcaaatat 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|||||||||||||||||| |||||| ||||||| || ||||| | |||||
Sbjct: 127 tctttaagcatgacataaatattttgatatttgcacaaaaattttaaataaaacgaatgg 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||| ||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 187 tcaaacattggtcgaaaagtcaacggcgtcatatattaaaatacggagggag 238
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||| ||||||||| |||||||||
Sbjct: 236 ccctccgtattttaatatatgacgccgttgactttt 201
>RF01062;MIR812;AACV01018413.1/13508-13681 39947:Oryza sativa
Japonica Group
Length = 174
Score = 137 bits (69), Expect = 8e-32
Identities = 149/176 (84%), Gaps = 6/176 (3%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaa--ttatgtaattatcatt 90
||||||||||||| |||||| ||||| |||||||| | |||| ||||||||||||||||
Sbjct: 174 gactttttaacaaacgtttgacctttcgtcttattcaaaaaaatttatgtaattatcatt 115
Query: 91 tattttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttg 150
||||||||||| | || |||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 114 tattttattgtgatttaatttatcatcaaatgttctttaagcatgac--aagcatttttg 57
Query: 151 catttgcat--nnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||| ||| |||||||||| ||||| |||||| ||||||||||||||
Sbjct: 56 tatttacataaaaaaaaattgaataagacgaatggtcaaacattggttaaaaagtc 1
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||| | ||||||||| |||||||||||
Sbjct: 137 ttgaataagacgaaaggtcaaacgtttgttaaaaagtc 174
>RF01062;MIR812;AAAA02015358.1/14907-14735 39946:Oryza sativa Indica
Group
Length = 173
Score = 137 bits (69), Expect = 8e-32
Identities = 106/118 (89%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttatt-aacaaaattatgtaattatcattt 91
|||||||| |||| |||||| ||| | |||||||| || |||||||||||||||||||||
Sbjct: 173 gactttttgacaaacgtttgacctatcgtcttattcaaaaaaattatgtaattatcattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||| | |||||||||| ||||||||||||||||||||||| |||| |||||||
Sbjct: 113 attttattataacttgatttaacatcaaatgttctttaagcatgatataattattttt 56
>RF01062;MIR812;AP008217.1/26672428-26672257 39947:Oryza sativa
Japonica Group
Length = 172
Score = 137 bits (69), Expect = 8e-32
Identities = 145/171 (84%), Gaps = 2/171 (1%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||| | | |||||| || || |||||||| | |||||| |||||||||||||||
Sbjct: 172 gactttttatccaacgtttgaccattcgtcttattcaaaaaatttatgtaattatcattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| | |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 112 attttattgtgatttgattcatcatcaaatgttctttaagcatgacataaatattttcat 53
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaag 202
|||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 52 gtttgca-aaaaaaattgaataaaatgaatgatcaaacgttggttaaaaag 3
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||| ||||||||||| |||||||||
Sbjct: 135 ttgaataagacgaatggtcaaacgttggataaaaagtc 172
>RF01058;MIR806;AAAA02026678.1/17171-16930 39946:Oryza sativa Indica
Group
Length = 242
Score = 137 bits (69), Expect = 8e-32
Identities = 193/234 (82%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| ||||||||||| |||||| || || ||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgactttttataccacgtttgaccattcatctt 66
Query: 65 attaacaaaa--ttatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
||| | |||| ||||||| ||||||||||||||||| | |||||| || |||| |||||
Sbjct: 67 attcaaaaaaatttatgta-ttatcatttattttattatgacttgacttgtcataaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttg-aataagatgaat 181
||||||||||| ||||||| |||||| |||| || || ||||| | ||||
Sbjct: 126 ttctttaagcacgacataaatattttcatatttacacaaaaagagtggaataaaacgaat 185
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 186 ggtcaaacgttggttaaaaagtcaacggcgtcatacattagaatacggagggag 239
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataagatgaatggtcaaacgtggtataaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 67.9 bits (34), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
||||||||||| |||||||||||||| ||||||||||||| | ||||||
Sbjct: 237 ccctccgtattctaatgtatgacgccgttgactttttaaccaacgtttg 189
>RF01058;MIR806;AAAA02023396.1/274-514 39946:Oryza sativa Indica
Group
Length = 241
Score = 137 bits (69), Expect = 8e-32
Identities = 191/228 (83%), Gaps = 5/228 (2%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| ||||||||||||||||||| |||||||||| |||| |||||| || || ||||||
Sbjct: 8 ctccatattttaatgtatgacgccgttgacttttttacaa-cgtttgaccattcgtctta 66
Query: 66 ttaacaaaa-ttatgtaattatca-tttattttattgtnacttgatttatcatcaaatgt 123
|||| |||| ||||| |||||||| ||||||||||||| |||||||| || |||||||||
Sbjct: 67 ttaaaaaaaattatgcaattatcactttattttattgtgacttgattcattatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttg-aataagatgaatg 182
| ||||| |||||||||| |||||| |||| | ||| ||||| | |||||
Sbjct: 127 tttttaaacatgacataaatattttcatattt-tacaaaaattttgcaataaaacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
|||||||||| | ||||||||||| ||||||||||||||||||||||
Sbjct: 186 gtcaaacgttgatcaaaaagtcaacagcgtcatacattaaaatacgga 233
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||||||| | |||||||||||||||||||||||||||||| ||
Sbjct: 68 aataagacgaatggtcaaacgttg-taaaaaagtcaacggcgtcatacattaaaatatgg 10
Query: 230 ag 231
||
Sbjct: 9 ag 8
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 7 tccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||||||||| ||||||||||
Sbjct: 233 tccgtattttaatgtatgacgctgttgacttttt 200
>RF01058;MIR806;AAAA02022417.1/32486-32727 39946:Oryza sativa Indica
Group
Length = 242
Score = 137 bits (69), Expect = 8e-32
Identities = 187/226 (82%), Gaps = 4/226 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||| |||||||| |||||||||| | | |||||| || || |||||
Sbjct: 7 cctccatattttaatgcatgacgccgttgactttttgtccaacgtttgaccattcgtctt 66
Query: 65 att--aacaaaat-tatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
||| || ||||| |||||||||||||||||||||||||| |||||||| | |||||||
Sbjct: 67 attcaaaaaaaatatatgtaattatcatttattttattgtgacttgattcgttatcaaat 126
Query: 122 gttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaat 181
||||||||||||||||||| |||||| |||||| | |||||||| | |||
Sbjct: 127 attctttaagcatgacataaatattttcacatttgta-aaaaaaattgaataaaacaaat 185
Query: 182 gatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatac 227
| |||||||||||| |||||||||||| |||||| ||||||||||
Sbjct: 186 ggtcaaacgttggtcgaaaagtcaacggtgtcatatattaaaatac 231
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggacaaaaagtcaacggcgtcatgcattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
>RF01058;MIR806;AAAA02004860.1/16027-16266 39946:Oryza sativa Indica
Group
Length = 240
Score = 137 bits (69), Expect = 8e-32
Identities = 188/228 (82%), Gaps = 2/228 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||||||||| ||| |||||| | || |||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgactttttttcaa-cgtttgatcattcgtctt 65
Query: 65 att-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| || || |||| ||||||| |||||||||||| | ||||||||||||||||||| |
Sbjct: 66 attcaaaaagtttatataattataatttattttattatgacttgatttatcatcaaatat 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
| |||||||||||||||| ||| || |||| || |||||||| | ||||
Sbjct: 126 tttttaagcatgacataaatatgttcatatttacacaaaaaatttgaataaaacgaatag 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggag 231
|||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 186 tcaaacgttggtcgaaaagtcaatggcgtcatacattaaaatacggag 233
Score = 83.8 bits (42), Expect = 1e-15
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 71 ttgaataagacgaatgatcaaacgttgaa-aaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 6 ctccgtattttaatgtatgacgccattgactttt 39
||||||||||||||||||||||||||||||||||
Sbjct: 233 ctccgtattttaatgtatgacgccattgactttt 200
>RF01058;MIR806;AC090683.7/82383-82144 39947:Oryza sativa Japonica
Group
Length = 240
Score = 137 bits (69), Expect = 8e-32
Identities = 191/232 (82%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| ||||||| || ||| |||||| || || ||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgacttcttttcaa-cgtttgaccattcatctt 65
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||||| | ||||||||| ||||||||| |
Sbjct: 66 atttaaaaaatttatgtaattatcatttattttattatgacttgatttgtcatcaaatat 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||| |||||||||| |||||| ||||||| || ||||| | |||||
Sbjct: 126 tctttaaacatgacataaatattttcatatttgcacaaaaattttaaataaaacgaatgc 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||| |||| ||||||| || || ||||||||||||||||||
Sbjct: 186 tcaaacgttggtcgaaaaatcaacggtgttgtatattaaaatacggagggag 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||
Sbjct: 68 aataagatgaatggtcaaacgttgaa-aagaagtcaacggcgtcatacattaaaatatgg 10
Query: 230 agg 232
|||
Sbjct: 9 agg 7
>RF01062;MIR812;AAAA02021096.1/2615-2783 39946:Oryza sativa Indica
Group
Length = 169
Score = 135 bits (68), Expect = 3e-31
Identities = 88/94 (93%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttatt-aacaaaattatgtaattatcatttattttattgtnact 105
|||||| || ||||||||||| || ||||||||||||||||||||||||||||||| ||
Sbjct: 155 cgtttgaccatttgtcttattcaaaaaaattatgtaattatcatttattttattgtgtct 96
Query: 106 tgatttatcatcaaatgttctttaagcatgacat 139
||||||||||||||||||||||||||||||||||
Sbjct: 95 tgatttatcatcaaatgttctttaagcatgacat 62
>RF01062;MIR812;AACV01011125.1/8105-8277 39947:Oryza sativa Japonica
Group
Length = 173
Score = 135 bits (68), Expect = 3e-31
Identities = 143/170 (84%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||||| | | |||| | || |||||||| | |||||| |||||| ||| ||||
Sbjct: 173 gactttttaacgaacatttgatcattcgtcttattcaaaaaatttatgtaactataattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 113 attttattgtgacttgatttatcatcaaatgttctttaagcacgccataagtatttttat 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaa 201
|||||||| |||||||||| || || ||||||||||||||||||
Sbjct: 53 atttgcataaaaattttgaataagacgattggtcaaacgttggttaaaaa 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||||||||| ||| |||||||||||
Sbjct: 136 ttgaataagacgaatgatcaaatgttcgttaaaaagtc 173
>RF01062;MIR812;AP008208.1/8048676-8048848 39947:Oryza sativa
Japonica Group
Length = 173
Score = 135 bits (68), Expect = 3e-31
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 34 actttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattta 92
||||||| | || |||||| | ||| |||||||| | |||||| ||||||||||||||||
Sbjct: 172 actttttgataaacgtttgacatttcgtcttatttaaaaaatttatgtaattatcattta 113
Query: 93 ttttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 112 ttttattgtgacttgatttatcatcaaatgttctttaagcataacataaatattttt 56
>RF01058;MIR806;AC079022.2/151275-151505 4530:Oryza sativa (rice)
Length = 231
Score = 135 bits (68), Expect = 3e-31
Identities = 126/145 (86%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| ||||||||||| | | ||||| || || || ||
Sbjct: 7 cctccatattttaatgtatgacgccgttgactttttatccaatgtttgaccattcgtttt 66
Query: 65 attaacaaaat-tatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | ||||| |||| ||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 67 attcaaaaaatctatgcaattatcatttattttattgtgacttgatttatcatcaaatat 126
Query: 124 tctttaagcatgacataagtatttt 148
|||||||||||||||| ||||||
Sbjct: 127 cttttaagcatgacataaatatttt 151
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||||| |||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataaaacgaatggtcaaacattggataaaaagtcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
>RF01058;MIR806;AK103228.1/2607-2849 39947:Oryza sativa Japonica
Group
Length = 243
Score = 133 bits (67), Expect = 1e-30
Identities = 187/228 (82%), Gaps = 3/228 (1%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||| | |||| ||||| | | |||||| || || |||||||| |
Sbjct: 13 tattttaatgtatgacgtcgttgattttttgtccaacgtttgaccattcgtcttattcaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| || ||||||| |||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 73 aaaatttatataattattatttattttattgtgacttgattcatcatcaaatgttcttta 132
Query: 130 agcatgacataagtatttt--tgcatttgcatnnnnnnnttgaataagatgaatgatcaa 187
|||||||||||| |||||| | ||||||| || ||||| | ||||| ||||
Sbjct: 133 agcatgacataaatattttcatatatttgcacaaaatttttaaataatacgaatggtcaa 192
Query: 188 acgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||| ||| || ||| ||||||||||||||||||||| ||||
Sbjct: 193 acgttggtcgaaaggttaacaacgtcatacattaaaatacggacggag 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggacaaaaaatcaacgacgtcatacattaaaata 13
>RF01062;MIR812;AAAA02019803.1/31824-31994 39946:Oryza sativa Indica
Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| ||||||||||||||||||||||||| |||
Sbjct: 157 cgtttgaccattcgtcttattcaaaaaatttatgtaattatcatttattttattgtgact 98
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 97 tgatttatcatcaaatattctttaagcatgacataaatattttt 54
>RF01062;MIR812;AP004869.3/127111-127283 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaa-ttatgtaattatcatttattttattgtnact 105
|||||| || || |||||||||| |||| ||||||||||||||||||||||| ||| |||
Sbjct: 159 cgtttgaccattcgtcttattaaaaaaaattatgtaattatcatttattttaatgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtattttt 149
||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 99 tgattcatcatcaaatattctttaagcatgacataagtattttt 56
>RF01062;MIR812;AL731887.5/125451-125266 4530:Oryza sativa (rice)
Length = 186
Score = 131 bits (66), Expect = 5e-30
Identities = 112/130 (86%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 130 ttatgtaattataatttattttattgtgatttgatttatcatcaaattttctttaagcat 71
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|||||| |||||||| |||||||| |||||||||| || || ||||||||| |
Sbjct: 70 gacataggtatttttacatttgcacaaaaattttgaataagacgagtggtcaaacgttag 11
Query: 195 ttaaaaagtc 204
||||||||||
Sbjct: 10 ttaaaaagtc 1
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgtt 192
|||||||||||||||| |||||||||
Sbjct: 149 ttgaataagatgaatggtcaaacgtt 174
>RF01062;MIR812;AP008212.1/20816861-20816691 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| ||||||||||||||||||||||||| |||
Sbjct: 158 cgtttgaccattcgtcttattcaaaaaatttatgtaattatcatttattttattgtgact 99
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 98 tgatttatcatcaaatattctttaagcatgacataaatattttt 55
>RF01062;MIR812;AC137588.2/109118-108950 39947:Oryza sativa Japonica
Group
Length = 169
Score = 131 bits (66), Expect = 5e-30
Identities = 87/93 (93%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 58 ttgtcttattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcat 116
|||||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 145 ttgtcttattcaaaaaatttatgtaattatcatttattttattgtgacttgatttatcat 86
Query: 117 caaatgttctttaagcatgacataagtattttt 149
|||||||| |||||||||||||||| |||||||
Sbjct: 85 caaatgttttttaagcatgacataaatattttt 53
>RF01062;MIR812;AP005008.3/43480-43652 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 89/96 (92%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttatt-aacaaaattatgtaattatcatttattttattgtnact 105
|||||| || || |||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct: 159 cgtttgaccattcgtcttatttaaaaaaattatgtaattatcatttattttattgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataa 141
||||| ||||||||||||||||||||||||||||||
Sbjct: 99 tgattcatcatcaaatgttctttaagcatgacataa 64
>RF01058;MIR806;AAAA02027673.1/19170-18939 39946:Oryza sativa Indica
Group
Length = 232
Score = 131 bits (66), Expect = 5e-30
Identities = 188/232 (81%), Gaps = 10/232 (4%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||| | |||||||||| | | |||||| | ||||||||
Sbjct: 7 cctccatattttaatgtatgacgtcgttgactttttgtctaacgtttgatcatttgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | |||||| ||||||||||||||||||||| ||| ||||| || ||||||||||||
Sbjct: 67 attcaaaaaatttatgtaattatcatttattttaatgtgacttgtttcatcatcaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||||||||| |||| ||||||| |||||||| | |||||
Sbjct: 127 tctttaagcatga---------ttttatatttgcacaaaaattttgaataaaacgaatgg 177
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| | ||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 178 tcaatctttggtcgaaaagtcaacggtgtcatacattaaaatacggagggag 229
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacaaatgatcaaacgttagacaaaaagtcaacgacgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
||||||||||||||||||||||| || |||||||||
Sbjct: 227 ccctccgtattttaatgtatgacaccgttgactttt 192
>RF01058;MIR806;AACV01003791.1/2790-3030 39947:Oryza sativa Japonica
Group
Length = 241
Score = 131 bits (66), Expect = 5e-30
Identities = 192/233 (82%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||||||||| || |||| ||||| ||| | |||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacaccgttgattttttttcaa-catttgaccattcgtctt 65
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg- 122
||| | |||||| |||| |||||||||||||||| ||| ||||||| |||||||||||
Sbjct: 66 attcaaaaaatttatgtgattatcatttattttaatgtggcttgattcatcatcaaatgt 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|| |||||||||||||||| |||||| |||| || |||||||| | |||||
Sbjct: 126 ttttttaagcatgacataaatattttcatatttacacaaaaattttgaataaaacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| || |||||||||| |||||||||||||||||||||||||||
Sbjct: 186 gtcaaacgttagtcgaaaagtcaacagcgtcatacattaaaatacggagggag 238
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
||||||||||||||||||||||||| |||||||||
Sbjct: 236 ccctccgtattttaatgtatgacgctgttgactttt 201
Score = 52.0 bits (26), Expect = 4e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||| |||| ||||| ||||||| ||||||||||||||||
Sbjct: 71 ttgaataagacgaatggtcaaatgttgaaaaaaaa-tcaacggtgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
>RF01062;MIR812;AP008217.1/19787492-19787662 39947:Oryza sativa
Japonica Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 114/133 (85%)
Strand = Plus / Minus
Query: 61 tcttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaa 120
||||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 143 tcttattaaaaaaattatgtaattatcatttattttattatgatttgatttatcatcaaa 84
Query: 121 tgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaa 180
||||||||||| |||| |||| ||||||| |||||||| |||||||||| |||
Sbjct: 83 tgttctttaagtatgatataaatatttttatatttgcatcaaaattttgaataagacgaa 24
Query: 181 tgatcaaacgttg 193
|| ||||| ||||
Sbjct: 23 tggtcaaaagttg 11
>RF01062;MIR812;AP003567.4/61466-61290 39947:Oryza sativa Japonica
Group
Length = 177
Score = 129 bits (65), Expect = 2e-29
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattatgacttgatttatcatcaaatgttctttaagcat 71
Query: 135 gacataagtatttttgcatttgca 158
||||||| ||||||| |||||||
Sbjct: 70 gacataaatatttttatatttgca 47
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 170 aataagatgaatgatcaaacgttggttaaaaa 201
||||||||||||| |||||||||||| |||||
Sbjct: 143 aataagatgaatggtcaaacgttggtaaaaaa 174
>RF01058;MIR806;AAAA02035822.1/1524-1768 39946:Oryza sativa Indica
Group
Length = 245
Score = 129 bits (65), Expect = 2e-29
Identities = 196/239 (82%), Gaps = 9/239 (3%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt--aacaancgtttgnccttttgt 61
|||||||||||||||||||| ||||| |||||||||| | ||| |||||| | || ||
Sbjct: 6 ccctccgtattttaatgtataacgccgttgactttttttatcaa-cgtttgactattcgt 64
Query: 62 cttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
|||||||| || ||| ||||||||||||||||||||| ||||| ||||| ||| |||
Sbjct: 65 cttattaaaaagtttacataattatcatttattttattgccacttgttttattatcgaat 124
Query: 122 gttctttaagcatgacataagtatt-----tttgcatttgcatnnnnnnnttgaataaga 176
||||||||| ||||||||| |||| |||| ||||||| || |||||||
Sbjct: 125 attctttaagtatgacataaatattttttatttggttttgcataaaatttttaaataaga 184
Query: 177 tgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 185 cgaatggtcaaacgtt-gttaaaaagtcaacgacgtcatacattacaatacggagggag 242
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 197 aaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 42 aaaaagtcaacggcgttatacattaaaatacggagggag 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
||||||||||| |||||||||||| | ||||||||||||||| |||||| || || ||||
Sbjct: 240 ccctccgtattgtaatgtatgacgtcgttgactttttaacaa-cgtttgaccattcgtct 182
Query: 64 tatt 67
||||
Sbjct: 181 tatt 178
>RF01058;MIR806;AP008212.1/19495150-19495391 39947:Oryza sativa
Japonica Group
Length = 242
Score = 129 bits (65), Expect = 2e-29
Identities = 132/157 (84%)
Strand = Plus / Plus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||
Sbjct: 79 ttatgtaattatcatttattttaatgtgatttgattcatcatcaaatgttctttaagcat 138
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
||||||| ||||||| |||| || || ||||| | |||| ||||||||||
Sbjct: 139 gacataaatatttttatatttacacaattttttttaataaaacgaatagtcaaacgttgt 198
Query: 195 ttaaaaagtcaacggcgtcatacattaaaatacggag 231
| |||||||||||||| |||||||||| |||||||||
Sbjct: 199 tcaaaaagtcaacggcatcatacattataatacggag 235
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 197 aaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||||||||||||||| ||||||||||| |||||
Sbjct: 42 aaaaagtcaacggcgtcacacattaaaatatggagg 7
>RF01058;MIR806;AP008214.1/3089188-3089426 39947:Oryza sativa
Japonica Group
Length = 239
Score = 129 bits (65), Expect = 2e-29
Identities = 136/161 (84%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||||||| |||||||||| ||| |||||||| |||||||||| ||||||||||||
Sbjct: 77 ttatgtaattattatttattttaatgtgacttgattcatcatcaaatattctttaagcat 136
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
||||||||||||||| |||| | |||||||| | ||||| |||||||| ||
Sbjct: 137 gacataagtatttttatatttactaaaaaaaattgaataaaacgaatggtcaaacgtagg 196
Query: 195 ttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
| ||||||||| |||||||||||||||||||||||||||
Sbjct: 197 -tcgaaagtcaacagcgtcatacattaaaatacggagggag 236
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||||||||||||||||| |||||||||||| | || ||||||||||||
Sbjct: 71 ttgaataaaacgaatgatcaaacgttgga-aaaaagtcaacgacttcgtacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttt 38
||||||||||||||||||||||||| ||||||||
Sbjct: 234 ccctccgtattttaatgtatgacgctgttgacttt 200
>RF01062;MIR812;AAAA02018205.1/9075-8896 39946:Oryza sativa Indica
Group
Length = 180
Score = 127 bits (64), Expect = 8e-29
Identities = 81/87 (93%)
Strand = Plus / Minus
Query: 62 cttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
|||||||| ||| ||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 151 cttattaaaaaatttatgtaattatcatttattttattgtgatttggtttatcatcaaat 92
Query: 122 gttctttaagcatgacataagtatttt 148
|||||||||||||||||||| ||||||
Sbjct: 91 gttctttaagcatgacataaatatttt 65
>RF01062;MIR812;AC079128.2/95337-95165 39947:Oryza sativa Japonica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 134/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttatt-aacaaaattatgtaattatcatttattttattgtnact 105
|||||| || ||||||||||| |||||| ||||||||||||||||||||||| ||| |||
Sbjct: 159 cgtttgaccatttgtcttattcaacaaatttatgtaattatcatttattttactgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnnn 165
||||| |||||||||| ||||||||| |||| |||| ||||||| |||| ||
Sbjct: 99 tgattcatcatcaaatattctttaagaatgagataaatatttttatattttcacagtaaa 40
Query: 166 nttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||| | ||||| |||||||||||||||||||||
Sbjct: 39 tttgaataaaacgaatggtcaaacgttggttaaaaagtc 1
>RF01062;MIR812;AAAA02025538.1/19542-19370 39946:Oryza sativa Indica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 134 aaaattatgtaattataatttattttattgtgacttgatttatcatcaaatattctttaa 75
Query: 131 gcatgacataagtattttt 149
||||||| |||||||||||
Sbjct: 74 gcatgacctaagtattttt 56
>RF01062;MIR812;AAAA02041175.1/390-217 39946:Oryza sativa Indica
Group
Length = 174
Score = 127 bits (64), Expect = 8e-29
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| | || |||||| ||||| |||||||| | |||||| ||| |||||||||||
Sbjct: 174 gacttttttataaacgtttgacctttcgtcttattcaaaaaatttatgcaattatcattt 115
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 114 gttttattgtgacttaatttatcatcaaatgttctttaagcatggcataagtatttt 58
>RF01062;MIR812;AAAA02016075.1/19486-19314 39946:Oryza sativa Indica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 134/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaa-ttatgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||| |||||||||||| |||||||||||||| |||
Sbjct: 159 cgtttgaccattcgtcttattcaaaaaagttatgtaattattatttattttattgtcact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnnn 165
| |||||||||||||| ||||||||| ||| ||||| |||||||| ||||| ||
Sbjct: 99 taatttatcatcaaatattctttaagtatggcataaatatttttgtatttgtataaaatt 40
Query: 166 nttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||| |||||||||| ||||||||||
Sbjct: 39 tttgaataagacgaatggtcaaacgttgtttaaaaagtc 1
>RF01062;MIR812;AACV01009073.1/2803-2972 39947:Oryza sativa Japonica
Group
Length = 170
Score = 127 bits (64), Expect = 8e-29
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 133 aaaattatgtaattatcatttattttattgtgatttgatttatcatcaaatgttctttaa 74
Query: 131 gcatgacataa 141
|||||||||||
Sbjct: 73 gcatgacataa 63
>RF01058;MIR806;AP008218.1/4158170-4158410 39947:Oryza sativa
Japonica Group
Length = 241
Score = 127 bits (64), Expect = 8e-29
Identities = 184/226 (81%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||| ||||||||||| | | |||||| || || |||||||| |
Sbjct: 13 tattttaatgtatgacgttattgactttttgtccaacgtttgaccattcgtcttattcaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|||||| |||||||||| |||||||||||||| |||||||| |||||||||| ||||| |
Sbjct: 73 aaaatttatgtaattattatttattttattgtgacttgattcatcatcaaatattcttca 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||||||| |||| ||||| |||| | | ||||| | ||||| ||||||
Sbjct: 133 agcatgatataaatatttccatatttacgcaaaattttgaaataaaacgaatgttcaaac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| | |||| |||||||||||||||||||||||||||||||||
Sbjct: 193 gttgatcgaaaaatcaacggcgtcatacattaaaatacggagggag 238
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttggacaaaaagtcaataacgtcatacattaaaata 13
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||||||||||||| |||| ||||
Sbjct: 236 ccctccgtattttaatgtatgacgccgttgattttt 201
>RF01062;MIR812;AACV01020560.1/19848-19677 39947:Oryza sativa
Japonica Group
Length = 172
Score = 125 bits (63), Expect = 3e-28
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaattatgtaattatcattta 92
||||||||||| | | |||| || ||||||||||| | |||||||| |||||||||||||
Sbjct: 172 gactttttaaccaacatttgaccatttgtcttattcaaaaaattatataattatcattta 113
Query: 93 ttttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgca 152
||||||| | ||||||| ||||||||||| ||||||||||||| || || ||||||| |
Sbjct: 112 ttttattatgacttgatctatcatcaaatattctttaagcatggcacaaatatttttata 53
Query: 153 tttgcatnnnnnnnttgaataagatgaatgatcaaacgttg 193
||||||| || ||||| ||||||| ||||||||||
Sbjct: 52 tttgcataaaatttttaaataaaatgaatggtcaaacgttg 12
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| |||| ||||| |||||||||||||||
Sbjct: 135 ttgaataagacaaatggtcaaatgttggttaaaaagtc 172
>RF01062;MIR812;AP008214.1/20460465-20460299 39947:Oryza sativa
Japonica Group
Length = 167
Score = 125 bits (63), Expect = 3e-28
Identities = 113/131 (86%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||
Sbjct: 131 aaaattatgtaattatcatttagtttattgtgacttgatttatcatcaaatattttttaa 72
Query: 131 gcatgacataagtattttt-gcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
||||||||||| ||||||| |||||||| |||||||||| |||||||||||
Sbjct: 71 gcatgacataaatatttttaatatttgcataaaaattttgaataagacaaatgatcaaac 12
Query: 190 gttggttaaaa 200
|||||| ||||
Sbjct: 11 gttggtcaaaa 1
>RF01058;MIR806;AP008207.1/12143471-12143712 39947:Oryza sativa
Japonica Group
Length = 242
Score = 125 bits (63), Expect = 3e-28
Identities = 187/229 (81%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||||||||| || |||| |||||| | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacaccgttgattttttattcaacgtttgaccattcgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | || ||| ||||||||||||||||||||||| | | |||||| ||| | ||||||
Sbjct: 67 atttaaaagatttatgtaattatcatttattttattatgatttgattcatcgttaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||| |||||||||| ||||||| ||||| | || ||||| | ||||||
Sbjct: 127 tctttaaacatgacataaatatttttatatttgtacaaaatttttaaataaaacgaatga 186
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcataca-ttaaaatacggag 231
| ||| |||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 187 ttaaatgttggtcaaaaagtcaacggtgtcatacatttaaaatacggag 235
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| ||||| |||||||||| |||||| ||||||| |||||||||||||||| ||
Sbjct: 69 aataagacgaatggtcaaacgttgaataaaaaatcaacggtgtcatacattaaaatatgg 10
Query: 230 agg 232
|||
Sbjct: 9 agg 7
>RF01062;MIR812;AAAA02005925.1/6557-6385 39946:Oryza sativa Indica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 88/96 (91%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| ||||||||||||||||||||||||| |||
Sbjct: 160 cgtttgaccgttcgtcttattcaaaaaatttatgtaattatcatttattttattgtgact 101
Query: 106 tgatttatcatcaaatgttctttaagcatgacataa 141
||||| ||||||||||||||||||||||||||||||
Sbjct: 100 tgattcatcatcaaatgttctttaagcatgacataa 65
>RF01062;MIR812;AAAA02004232.1/14157-13985 39946:Oryza sativa Indica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 143/172 (83%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||||| | |||||| || ||| ||||||| | |||||| |||||||||||||||
Sbjct: 173 gactttttaaataacgtttgaccatttatcttattcaaaaaatttatgtaattatcattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||| | ||||||||||||||||| ||||||||||| || |||||| |||||||
Sbjct: 113 attttattttgacttgatttatcatcaagtgttctttaagtataacataaatatttttat 54
Query: 152 atttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaagt 203
||||| | |||||||| | |||||| |||||||||||||||||||
Sbjct: 53 atttgtacaaaaattttgaataacacgaatgaccaaacgttggttaaaaagt 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
||||||||||| |||| ||||||||| ||||||||||
Sbjct: 136 ttgaataagataaatggtcaaacgttatttaaaaagtc 173
>RF01062;MIR812;AP003020.2/89411-89583 39947:Oryza sativa Japonica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 111/130 (85%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattgttacttgattcatcatcaaatattctttaagcat 71
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|| |||| |||||| ||||||| || ||||| ||||||| |||||||||||
Sbjct: 70 gatataaatattttcatatttgcaaaaaaagtttaaataaaatgaatggtcaaacgttgg 11
Query: 195 ttaaaaagtc 204
||||||||||
Sbjct: 10 ttaaaaagtc 1
>RF01062;MIR812;AAAA02006356.1/20472-20302 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 96/107 (89%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| || | |||||| || ||||||||||||| |||| | |||||||||||||||
Sbjct: 171 gactttttgactaacgtttgaccatttgtcttattaaaaaaaatcatgtaattatcattt 112
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgaca 138
|||||||| | ||||||||||||||||||| ||||||||||||||||
Sbjct: 111 attttattttgacttgatttatcatcaaatattctttaagcatgaca 65
>RF01062;MIR812;AAAA02001579.1/587-415 39946:Oryza sativa Indica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 111/130 (85%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattatgacttgattcatcatcaaatattctttaagcat 71
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|| |||||||||||| ||||||| |||||||| | ||||| |||||| ||||
Sbjct: 70 gaaataagtatttttatatttgcacaaaaaatttgaataaaacgaatggtcaaactttgg 11
Query: 195 ttaaaaagtc 204
||||||||||
Sbjct: 10 ttaaaaagtc 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaag 202
|||||| ||||||||||||||| ||||| |||||||
Sbjct: 136 ttgaatcagatgaatgatcaaatgttggataaaaag 171
>RF01062;MIR812;AAAA02027242.1/2990-3161 39946:Oryza sativa Indica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 100/112 (89%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 48 gtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnactt 106
||||| || || |||||||| | |||||| ||||||||||| ||||||||||||| ||||
Sbjct: 157 gtttgaccattcgtcttattcaaaaaatttatgtaattatcttttattttattgtgactt 98
Query: 107 gatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgca 158
|||||||||||||||||||||||||||||| |||| ||||||| |||||||
Sbjct: 97 gatttatcatcaaatgttctttaagcatgatataaatatttttatatttgca 46
>RF01062;MIR812;AP003886.3/23695-23868 39947:Oryza sativa Japonica
Group
Length = 174
Score = 123 bits (62), Expect = 1e-27
Identities = 111/127 (87%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||||| | |||||| || || |||||||||| |||||| |||||||||||||||
Sbjct: 174 gactttttaatcaacgtttgaccattcgtcttattaagaaaatttatgtaattatcattt 115
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| | ||||||||||||||||| |||||||| ||| || ||| ||||||||
Sbjct: 114 attttattgtgagttgatttatcatcaaatattctttaaacataacgtaaatatttttgt 55
Query: 152 atttgca 158
|||||||
Sbjct: 54 atttgca 48
>RF01062;MIR812;AAAA02029423.1/75522-75694 39946:Oryza sativa Indica
Group
Length = 173
Score = 121 bits (61), Expect = 5e-27
Identities = 133/156 (85%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaa-ttatgtaattatcatttattttattgtnact 105
|||||| || || |||||||||| |||| ||||||||| ||||||||||||||||| |||
Sbjct: 159 cgtttgaccattcgtcttattaaaaaaaattatgtaat-atcatttattttattgtaact 101
Query: 106 tgattt-atcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnn 164
|||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 100 tgattttatcatcaaatgttctttaaacatgacataaatatttttatatttgcataaaaa 41
Query: 165 nnttgaataagatgaatgatcaaacgttggttaaaa 200
|||||||||| ||||| ||||||| |||| ||||
Sbjct: 40 atttgaataagacgaatggtcaaacgatggtaaaaa 5
>RF01062;MIR812;AP008213.1/19334628-19334457 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattgtgacttgatttatcatcaaattttctttaagcat 71
Query: 135 gacataagtatttttg 150
||||||| || |||||
Sbjct: 70 gacataaatacttttg 55
>RF01062;MIR812;AP008216.1/1101644-1101815 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 104/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaa-ttatgtaattatcattt 91
|||||||| | || |||||| ||||| |||||||| | |||| |||| ||||||| ||||
Sbjct: 172 gactttttgataaacgtttgacctttcgtcttattcaaaaaacttatataattattattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||||| |||| |||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 112 attttattgtaacttcatttatcatcaaatattctttaagtatgacataagtattttt 55
>RF01062;MIR812;AACV01023606.1/15263-15434 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 129 ttatgtaattatcatttattttattgtgatttgatttattatcaaatgttctttaagcat 70
Query: 135 gacataagtatttttgcatttgca 158
||||||| ||||||| |||||||
Sbjct: 69 gacataaatatttttatatttgca 46
>RF01058;MIR806;AAAA02005296.1/2462-2244 39946:Oryza sativa Indica
Group
Length = 219
Score = 121 bits (61), Expect = 5e-27
Identities = 116/134 (86%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||| |||||| || ||||||||| || | |||||| | || ||||
Sbjct: 6 ccctccatattttaatatatgacaccgttgacttttcgaccaacgtttgatcattcgtct 65
Query: 64 tat-taacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
||| ||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 66 tatgtaaacaatttatgtaattatcatttattttaatgtgacttgatttatcatcaaatg 125
Query: 123 ttctttaagcatga 136
||||||||||||||
Sbjct: 126 ttctttaagcatga 139
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 171 ataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
|||||| |||||||||||||||||| |||||||||||| |||||| ||||||||| |||
Sbjct: 68 ataagacgaatgatcaaacgttggtcgaaaagtcaacggtgtcatatattaaaatatgga 9
Query: 231 gggag 235
|||||
Sbjct: 8 gggag 4
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||||| |||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 148 ttgaataaaacgaatggtcaaacgttggtcgaaaagtcaacgacgttctacattaaaata 207
Query: 227 cggagggag 235
|||||||||
Sbjct: 208 cggagggag 216
>RF01058;MIR806;AP008209.1/1121018-1120771 39947:Oryza sativa
Japonica Group
Length = 248
Score = 121 bits (61), Expect = 5e-27
Identities = 119/138 (86%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 13 ttttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaacaa 72
||||||| ||||||| | |||||||||| | | |||||| | || |||||||| | ||
Sbjct: 16 ttttaatatatgacgtcgttgactttttgagatacgtttgatcattcgtcttattcaaaa 75
Query: 73 aatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaag 131
| || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 76 actttatgtaattattatttattttattgtgacttgatttatcatcaaatgttctttaag 135
Query: 132 catgacataagtattttt 149
||| |||||| |||||||
Sbjct: 136 cataacataaatattttt 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaa 224
|||||||||| |||||||||||||| | |||||||||||| ||||||| |||||||
Sbjct: 73 ttgaataagacgaatgatcaaacgtatctcaaaaagtcaacgacgtcatatattaaaa 16
>RF01058;MIR806;AACV01013161.1/7320-7560 39947:Oryza sativa Japonica
Group
Length = 241
Score = 121 bits (61), Expect = 5e-27
Identities = 187/231 (80%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| |||||||||||||||| || |||||||||| | | |||||| || ||||||
Sbjct: 8 ctccatattttaatgtatgacaccgttgactttttgtccaacgtttgattattcgtctta 67
Query: 66 ttaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgtt 124
|| | |||||| |||||||||| |||||||||||| | |||||||| ||||||||||||
Sbjct: 68 ttcaaaaaatttatgtaattattatttattttattatgacttgattcgtcatcaaatgtt 127
Query: 125 ctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgat 184
|||| |||||||||||| ||||||| ||||| | || ||| | | |||| |
Sbjct: 128 ctttgagcatgacataaatatttttatatttgtacaaaaattttaaatgaaacgaatagt 187
Query: 185 caaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||||| |||||||||||| ||||||||||||||| ||||||||
Sbjct: 188 caaacgttggtcgaaaagtcaacggtatcatacattaaaatatggagggag 238
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 72 ttgaataagacgaataatcaaacgttggacaaaaagtcaacggtgtcatacattaaaata 13
Query: 227 cggag 231
||||
Sbjct: 12 tggag 8
>RF01062;MIR812;AAAA02033144.1/1007-836 39946:Oryza sativa Indica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 129 ttatgtaattatcatttattttattgtgacttgatttatcatcaaatgttctttaagaat 70
Query: 135 gacataa 141
|||||||
Sbjct: 69 gacataa 63
>RF01062;MIR812;AP008208.1/22528889-22528718 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 34 actttttaacaancgtttgnccttttgtcttattaacaaaattatgtaattatcatttat 93
|||||||| | | |||||| || || |||||||||| |||||||||||| ||||||||||
Sbjct: 171 actttttatccaacgtttgaccattcgtcttattaaaaaaattatgtaagtatcatttat 112
Query: 94 tttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatt 146
|||||| | |||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 111 tttattatgacttgattcgtcatccaatgttctttaagcatgatataagtatt 59
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagt 203
||||||| ||||| ||||||||||| ||||||||
Sbjct: 138 aataagacgaatggtcaaacgttggataaaaagt 171
>RF01062;MIR812;AP008213.1/19344538-19344367 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130 ttatgtaactatcatttattttattgtgacttgatttatcatcaaatgttctttaagcat 71
Query: 135 gacataa 141
|||||||
Sbjct: 70 gacataa 64
>RF01062;MIR812;AAAA02017891.1/58604-58777 39946:Oryza sativa Indica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattgtgatttgattcatcatcaaatgttctttaagcat 71
Query: 135 gacataagtattttt 149
||||||| |||||||
Sbjct: 70 gacataaatattttt 56
>RF01062;MIR812;AACV01023224.1/19789-19959 39947:Oryza sativa
Japonica Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 48 gtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnactt 106
||||| || ||||||||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 157 gtttgaccatttgtcttattcaaaaaatttatgtaattatcatttattttattgcgactt 98
Query: 107 gatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 97 gattcgtcatcaaatgttctttaagcatgacataaatatttt 56
>RF01062;MIR812;AAAA02021751.1/23191-23020 39946:Oryza sativa Indica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 103/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||| | | |||| | || ||||||||||| | |||||| |||||||||||||||
Sbjct: 172 gactttttatctaacgttagaccatttgtcttatttaaaaaatttatgtaattatcattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||||||||| |||||| | ||||||||||||||||||||||||| |||| ||||||
Sbjct: 112 attttattgtgacttgaatcatcatcaaatgttctttaagcatgatataaatatttt 56
>RF01062;MIR812;AP004785.2/95396-95567 39947:Oryza sativa Japonica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 62 cttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
|||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 143 cttattaaaaaaattatgtaattatcatttattttattgtgacttgattcatcattaaat 84
Query: 122 gttctttaagcatgacataagtatttt 148
|||||||||||| |||||| ||||||
Sbjct: 83 attctttaagcataacataaatatttt 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 178 gaatgatcaaacgttggttaaaaagtc 204
||||||||||||||||| |||||||||
Sbjct: 146 gaatgatcaaacgttggataaaaagtc 172
>RF01062;MIR812;AACV01008600.1/14273-14441 39947:Oryza sativa
Japonica Group
Length = 169
Score = 119 bits (60), Expect = 2e-26
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 48 gtttgnccttttgtcttattaacaaaatta-tgtaattatcatttattttattgtnactt 106
||||| || || |||||||| | ||||||| | |||||||||||||||||||||| ||||
Sbjct: 156 gtttgaccattcgtcttattcaaaaaattaatataattatcatttattttattgtgactt 97
Query: 107 gatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 96 gattcatcatcaaatgttctttaagcatgacataaatatttt 55
>RF01062;MIR812;AP004885.3/81364-81536 39947:Oryza sativa Japonica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 133/159 (83%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || ||||||||||| | ||| || ||||||||||||||||||||||||| |||
Sbjct: 159 cgtttgaccatttgtcttattcaaaaattttatgtaattatcatttattttattgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttttgcatttgcatnnnnnn 165
||||| |||||||||||| |||||| ||||||||| ||||||| ||||||||
Sbjct: 99 tgattcgtcatcaaatgttttttaagtatgacataaatatttttatatttgcataaaatt 40
Query: 166 nttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||| | ||||| |||||||||| || |||||||
Sbjct: 39 tttgaataaaacgaatggtcaaacgttgattgaaaagtc 1
>RF01062;MIR812;AP008208.1/20187439-20187612 39947:Oryza sativa
Japonica Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 103/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttatt-aacaaaattatgtaattatcattt 91
||||||||| | | |||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 174 gactttttatccaacgtttgaccattcgtcttattcaaaaaaattatgtaattatcattt 115
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||||||| | |||||||| |||| |||||||||||||||||||||||| ||||||
Sbjct: 114 attttattatgacttgattcttcattaaatgttctttaagcatgacataaatatttt 58
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||| ||||||||||| |||||||||
Sbjct: 137 ttgaataagacgaatggtcaaacgttggataaaaagtc 174
>RF01058;MIR806;AP003504.1/120118-120357 39947:Oryza sativa Japonica
Group
Length = 240
Score = 119 bits (60), Expect = 2e-26
Identities = 190/233 (81%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||| ||||||||| || ||||||| | | ||||| || || || ||
Sbjct: 7 cctccatattttaatatatgacgccgttaactttttgtccaatgtttgaccattcgtttt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaat-g 122
||| | |||||| || ||||||| |||||||||||| | ||||||| | |||||| |
Sbjct: 67 attcaaaaaatttatataattattatttattttattatgacttgatga--cgtcaaattg 124
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
||||||||||||||||||| |||||| |||| || |||||||| | |||||
Sbjct: 125 ttctttaagcatgacataaatattttcatatttacaccaaaaatttgaataaaacgaatg 184
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 185 atcaaacgttggttgaaaagtcaacggcgtcatatattaaaatacggagggag 237
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||| | ||||| |||||| |||| ||||||| |||||||||||| |||||||||
Sbjct: 72 ttgaataaaacgaatggtcaaacattggacaaaaagttaacggcgtcatatattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttg 52
|||||||||||||||| ||||||||| ||||||||| ||| | ||||||
Sbjct: 235 ccctccgtattttaatatatgacgccgttgacttttcaaccaacgtttg 187
>RF01058;MIR806;AAAA02018512.1/11882-11641 39946:Oryza sativa Indica
Group
Length = 242
Score = 119 bits (60), Expect = 2e-26
Identities = 191/235 (81%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||||||||| || |||||||||| | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacaccgttgactttttgttcaacgtttgaccgttcgtctt 66
Query: 65 attaacaaaa---ttatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
||| ||||| |||| |||||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 67 att--caaaagttttatataattatcatttatttcattgtgacttgattcatcatcaaat 124
Query: 122 gttcttt-aagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaa 180
||| ||| |||||| |||||| ||||| |||| || |||||||| | ||
Sbjct: 125 gtttttttaagcataacataaacattttcatattttcaaaaaaaaattgaataaaacaaa 184
Query: 181 tgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|| |||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tggtcaaacattgctcaaaaagtcaacggcgtcatacattaaaatacggagggag 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 72 ttgaataagacgaacggtcaaacgttgaacaaaaagtcaacggtgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||||||||||||| ||||||||||
Sbjct: 237 ccctccgtattttaatgtatgacgccgttgacttttt 201
>RF01058;MIR806;AP008216.1/19831620-19831380 39947:Oryza sativa
Japonica Group
Length = 241
Score = 119 bits (60), Expect = 2e-26
Identities = 180/222 (81%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||||||||||||| ||||||||| || || |||||| | | |||| || ||||||
Sbjct: 8 ctccgtattttaatatatgacgccgttaacattttaatcaacatttgattattcgtctta 67
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
|| | ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 68 ttcaaaaatgtatgtaattatcatttattttattgttacttgatttatcatcaaatattg 127
Query: 126 tttaagcatgacataagtatttttgcatttgca-tnnnnnnnttgaataagatgaatgat 184
||||||| ||| | || ||||||| |||| | || ||||||| ||||| |
Sbjct: 128 tttaagcttgatacaaatatttttatatttaaacaaaaaaatttaaataagacgaatggt 187
Query: 185 caaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 188 caaacgttggttgaaaagtcaacggcgtcatatattaaaata 229
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||| |||||| |||| |||||| || |||||||||||| |||||||||
Sbjct: 72 ttgaataagacgaataatcaaatgttgattaaaatgttaacggcgtcatatattaaaata 13
Query: 227 cggag 231
|||||
Sbjct: 12 cggag 8
>RF01062;MIR812;AC093088.4/60130-60294 39947:Oryza sativa Japonica
Group
Length = 165
Score = 117 bits (59), Expect = 7e-26
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaattatgtaattatcattta 92
||||||||| | | |||||| || || || ||||||| || ||||||||||||||||||
Sbjct: 165 gactttttatccaacgtttgaccattcgttttattaaaaactttatgtaattatcattta 106
Query: 93 ttttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
||||||||| |||||||| |||||||||||||||||||| |||| |||| ||||||
Sbjct: 105 ttttattgtgacttgattaatcatcaaatgttctttaagtatgatataaatatttt 50
>RF01058;MIR806;AP008208.1/2259935-2260177 39947:Oryza sativa
Japonica Group
Length = 243
Score = 117 bits (59), Expect = 7e-26
Identities = 190/233 (81%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 6 ctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctta 65
|||| ||||||||||||||| | ||||||||||| | | |||||| | || ||||||
Sbjct: 8 ctccatattttaatgtatgatactgttgactttttatccaacgtttgactattcgtctta 67
Query: 66 ttaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaa-tgt 123
|| | |||||| ||||||||||||||||||||||||| |||||||||||||| ||| |
Sbjct: 68 ttcaaaaaatttatgtaattatcatttattttattgtaacttgatttatcattaaacatt 127
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
| |||||||||||||||| |||||| ||||||| |||||||| | ||||
Sbjct: 128 tttttaagcatgacataaatattttcatatttgcacaaaatttttgaataaaacgaatag 187
Query: 184 tcaaacgttggt-taaaaagtcaacggcgtcatacattaaaatacggagggag 235
||||||||| || |||||||||| ||||||||||||||||||||||||||
Sbjct: 188 tcaaacgttcgtcaaaaaagtcaataacgtcatacattaaaatacggagggag 240
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||| ||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 72 ttgaataagacgaatagtcaaacgttggataaaaagtcaacagtatcatacattaaaata 13
Query: 227 cggag 231
||||
Sbjct: 12 tggag 8
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||||||||||| |||||||||||
Sbjct: 238 ccctccgtattttaatgtatgacgttattgacttttt 202
>RF01058;MIR806;AACV01027070.1/3914-3673 39947:Oryza sativa Japonica
Group
Length = 242
Score = 117 bits (59), Expect = 7e-26
Identities = 189/233 (81%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| |||| ||||| | | |||||| || ||||||||
Sbjct: 7 cctccatattttaatgtatgacgccgttgattttttgtccaacgtttgaccatttgtctt 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg- 122
||| | |||||| |||||||||| |||||||||||| | |||||||| ||||||||||
Sbjct: 67 attcaaaaaatttatgtaattattatttattttattatgacttgattcgtcatcaaatgt 126
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|| ||| |||||||||| |||||| |||| || |||||| | | | ||
Sbjct: 127 ttttttgagcatgacatttatattttcatatttacacaaaaattttgaatgaaacaattg 186
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 187 gtcaaacgttggtgcaaaagtcaacggcgtcatacattaaaatatggagggag 239
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 72 ttgaataagacaaatggtcaaacgttggacaaaaaatcaacggcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||| ||||||||||||||||||| |||||||||
Sbjct: 237 ccctccatattttaatgtatgacgccgttgactttt 202
>RF01058;MIR806;AAAA02011703.1/7958-8197 39946:Oryza sativa Indica
Group
Length = 240
Score = 117 bits (59), Expect = 7e-26
Identities = 186/229 (81%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| |||||||||||||||||| ||||||||||| | | ||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgcagttgactttttatccaatgtttgaccattcgtctt 66
Query: 65 att-aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| || ||| ||||||| |||| |||||||||||||| |||||||| ||||| ||||||
Sbjct: 67 attcaagaaatttatgtagttattatttattttattgtgacttgattcatcattaaatgt 126
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
| |||||| |||| |||| |||||| |||| || |||||||| | |||||
Sbjct: 127 tatttaag-atgatataaatattttcatatttacacaaaaaatttgaataaaacgaatgg 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
|||||| ||| | |||||||||| | | |||||||||||||||||||||
Sbjct: 186 tcaaacattgttcaaaaagtcaatgacatcatacattaaaatacggagg 234
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| |||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacattggataaaaagtcaactgcgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 5 cctccgtattttaatgtatgacgccattgacttttt 40
||||||||||||||||||||| | ||||||||||||
Sbjct: 234 cctccgtattttaatgtatgatgtcattgacttttt 199
>RF01062;MIR812;AAAA02036001.1/6521-6349 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 81/89 (91%)
Strand = Plus / Minus
Query: 60 gtcttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaa 119
|||||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 146 gtcttactaaaaaaattatgaaattatcatttattttattgtgacttgattcatcatcaa 87
Query: 120 atgttctttaagcatgacataagtatttt 148
|||||||||||| || |||||| ||||||
Sbjct: 86 atgttctttaagaataacataaatatttt 58
>RF01062;MIR812;AAAA02006291.1/2721-2549 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatta-tgtaattatcatttattttattgtnact 105
|||||| || |||||||| |||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 159 cgtttgaccatttgtcttgttaaaaaaattaatgtaattatcatttattttattgtaact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataa 141
||||| ||||| ||||||||||||||||||| ||||
Sbjct: 99 tgattcatcattaaatgttctttaagcatgatataa 64
>RF01062;MIR812;AP008207.1/37348287-37348454 39947:Oryza sativa
Japonica Group
Length = 168
Score = 115 bits (58), Expect = 3e-25
Identities = 110/127 (86%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| |||| |||||| ||||| |||||||| | |||||| |||||||||| ||||
Sbjct: 168 gactttttgacaaacgtttgacctttcgtcttattcaaaaaatttatgtaattataattt 109
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttttgc 151
|||||||||| | |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 108 attttattgtgatttgatttatcatcaaatgttct-----catgacataagtatttttat 54
Query: 152 atttgca 158
|||||||
Sbjct: 53 atttgca 47
>RF01062;MIR812;AAAA02022700.1/25423-25593 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 101/115 (87%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||| | | |||||| || || |||||||| | |||||| |||||| ||||||||
Sbjct: 171 gactttttatctaacgtttgaccattcgtcttattcaaaaaatttatgtaactatcattt 112
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatt 146
|||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct: 111 attttattgtgacttgattcatcatcaaatattctttaagcatgacataaatatt 57
>RF01062;MIR812;AACV01019811.1/23825-23653 39947:Oryza sativa
Japonica Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 81 aattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatgacata 140
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 124 aattatcatttattttattgtgacttgatttatcatcaaatgttctttaagaatgacata 65
Query: 141 agtattttt 149
| |||||||
Sbjct: 64 aatattttt 56
>RF01062;MIR812;AACV01024929.1/4415-4244 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| |||| ||||||||||||||||| || |||
Sbjct: 158 cgtttgaccattcgtcttattcaaaaaatttatgttattatcatttattttatcgtgact 99
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtattttt 149
||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 98 tgatttatcatcaaatgttctttaagcatgatataaatattttt 55
>RF01062;MIR812;AL928755.5/60832-60660 4530:Oryza sativa (rice)
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
|||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 139 ttaaaaaatttatgtaattatcatttattttattgtgacttgatttaccatcaaatgttc 80
Query: 126 tttaagcatgaca 138
|||||||||||||
Sbjct: 79 tttaagcatgaca 67
>RF01062;MIR812;AP005803.3/122885-122730 39947:Oryza sativa Japonica
Group
Length = 156
Score = 115 bits (58), Expect = 3e-25
Identities = 86/95 (90%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||||||| |||||| |||||||||||||| | |||||| |||||| ||| ||||
Sbjct: 156 gactttttaacaaacgtttgaccttttgtcttattcaaaaaatttatgtaaatataattt 97
Query: 92 attttattgtnacttgatttatcatcaaatgttct 126
|||||||||| |||| |||||||||||||||||||
Sbjct: 96 attttattgtgacttaatttatcatcaaatgttct 62
>RF01062;MIR812;AP005185.4/33562-33390 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 110/130 (84%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 130 ttatgtaattataatttattttattgtgacttgatttatcatcaaatgttgtttaagcat 71
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
||||||| || ||| ||||||| |||||||||||||||| |||||||||
Sbjct: 70 gacataaatacgtttatatttgcacaaaaaatttgaataagatgaatggctaaacgttgg 11
Query: 195 ttaaaaagtc 204
| ||||||||
Sbjct: 10 tcaaaaagtc 1
>RF01062;MIR812;AACV01000531.1/1917-1745 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 106/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||| || | |||||| | |||||||||||| | |||||| |||||||||| ||||
Sbjct: 173 gactttttgaccaacgtttgactttttgtcttattcaaaaaatttatgtaattataattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagca-tgacataagtattttt 149
||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 113 attttattgagacttgatttat-atcaaatgttctttaagcattgacataagtattttt 56
>RF01058;MIR806;AAAA02035379.1/707-468 39946:Oryza sativa Indica
Group
Length = 240
Score = 115 bits (58), Expect = 3e-25
Identities = 186/232 (80%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||||| ||||||||| ||||| || |||| ||||| | | | |||| || || || |
Sbjct: 6 ccctccatattttaatatatgatgctgttgattttttttccaacatttgaccattcgttt 65
Query: 64 tattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
|||||| ||| ||||||||||||||||||||||||| | |||||||| |||||||| |
Sbjct: 66 tattaaaaaatttatgtaattatcatttattttattatgacttgattcgccatcaaatat 125
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
|| ||||||||||||||| |||||| |||| || || ||||| | |||||
Sbjct: 126 tcgttaagcatgacataaatattttcatatttacacaaaaattttaaataaaacgaatgg 185
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| | ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 186 tcaagcattggtcgaaaagtcaacggcgtcatacattaaaatatggagggag 237
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttt 39
|||||| ||||||||||||||||||| |||||||||
Sbjct: 235 ccctccatattttaatgtatgacgccgttgactttt 200
>RF01062;MIR812;AC103551.7/8586-8757 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| ||||||||||||||||||||| ||| |||
Sbjct: 158 cgtttgaccattcgtcttattcaaaaaatttatgtaattatcatttattttactgtgact 99
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttt 148
||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 98 tgattcatcgtcaaatgttctttaagcatgacataaatatttt 56
>RF01062;MIR812;AC128706.4/134768-134940 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| || ||||||| |||||||||||||| |||
Sbjct: 159 cgtttgaccattcgtcttattcaaaaaatttatataattattatttattttattgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttt 148
||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 99 tgattcatcatcaaatgttctttaagcatgacataaatatttt 57
>RF01062;MIR812;AP003233.3/14005-14192 39947:Oryza sativa Japonica
Group
Length = 188
Score = 113 bits (57), Expect = 1e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 78 tgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatgac 137
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 141 tgtaattatcatttatttttttgtgacttgatttatcatcaaatgttctttaagcatgac 82
Query: 138 ataa 141
||||
Sbjct: 81 ataa 78
>RF01062;MIR812;AC136491.4/110879-110708 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 60 gtcttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaa 119
|||||||| | ||| |||||||||||| ||| |||||||| | |||||||| ||||| ||
Sbjct: 145 gtcttatttaaaaatttatgtaattattattaattttattatgacttgattcatcattaa 86
Query: 120 atgttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatga 179
|||||||||||||||||||||| |||||| |||||||| |||||||| ||||
Sbjct: 85 atgttctttaagcatgacataaatattttcatatttgcataaaatttttgaataaaatga 26
Query: 180 atgatcaaacgttggttaaaaagtc 204
||| ||||| |||| ||||||||||
Sbjct: 25 atggtcaaatgttgattaaaaagtc 1
>RF01062;MIR812;AACV01012100.1/3149-2978 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 133 aaaattatgtaactattatttattttattgtgacttgatttatcattaaatgttctttaa 74
Query: 131 gcatgacataagtattttt 149
||||||| ||| |||||||
Sbjct: 73 gcatgacttaaatattttt 55
>RF01062;MIR812;AAAA02037227.1/8276-8104 39946:Oryza sativa Indica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
|||| ||| |||||||||||||||||||||||| || ||||||||||||||||||| |||
Sbjct: 139 ttaaaaaatttatgtaattatcatttattttatcgtgacttgatttatcatcaaatattc 80
Query: 126 tttaagcatgacataagtatttt 148
|||| ||||||||||| ||||||
Sbjct: 79 tttatgcatgacataaatatttt 57
>RF01062;MIR812;AAAA02032881.1/281-452 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 100/114 (87%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaattatgtaattatcatttattttattgtnactt 106
|||||| || || |||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct: 158 cgtttgaccattcgtcttattcaaaaaattatgtaattatcatttattttattgtgactt 99
Query: 107 gatttatcatcaaatg-ttctttaagcatgacataagtatttttgcatttgcat 159
||||| |||||||||| || |||||| |||| |||| ||||||| ||||||||
Sbjct: 98 gatttgtcatcaaatgtttttttaagtatgatataaatatttttatatttgcat 45
>RF01062;MIR812;AACV01014217.1/2784-2957 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 5e-24
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||
Sbjct: 130 ttatgtaattatcatttattttaatgtgatttgattcatcatcaaatgttctttaagcat 71
Query: 135 gacataagtattttt 149
||||||| |||||||
Sbjct: 70 gacataaatattttt 56
>RF01062;MIR812;AAAA02002562.1/9807-9636 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 111/131 (84%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 132 aaaattatgtaattattatttattttattgtgacttgatttattat--aatgttctttaa 75
Query: 131 gcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacg 190
|||| |||||| ||||||| ||||||| |||||||||| |||||||||||||
Sbjct: 74 gcataacataaatatttttaaatttgcacaaaatatttgaataagacgaatgatcaaacg 15
Query: 191 ttggttaaaaa 201
|| || |||||
Sbjct: 14 ttagtaaaaaa 4
>RF01062;MIR812;AAAA02032484.1/30760-30586 39946:Oryza sativa Indica
Group
Length = 175
Score = 111 bits (56), Expect = 5e-24
Identities = 103/117 (88%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 35 ctttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttat 93
|||||| |||| |||||| | ||| |||||||| | |||||| |||||||||| ||||||
Sbjct: 173 cttttttacaaacgtttgacttttcgtcttattcaaaaaatttatgtaattataatttat 114
Query: 94 tttattgtnacttgatttatcatcaaatgttc-tttaagcatgacataagtattttt 149
||| |||| ||||||||||||||||||||||| |||||| ||||||||| |||||||
Sbjct: 113 tttcttgtgacttgatttatcatcaaatgttcttttaagtatgacataaatattttt 57
>RF01062;MIR812;AACV01017284.1/4164-3992 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||||||| |||||||||| ||| |||||||| |||||||||| ||||||||||||
Sbjct: 130 ttatgtaattattatttattttaatgtgacttgattcatcatcaaatattctttaagcat 71
Query: 135 gacataagtattttt 149
|||||||||||||||
Sbjct: 70 gacataagtattttt 56
>RF01062;MIR812;AP008209.1/25457682-25457510 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||| | | |||||| || ||||||||||| | |||||| ||||||| || ||||
Sbjct: 173 gactttttatccaacgtttgaccatttgtcttatttaaaaaatttatgtaatcattattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 113 attttattgttaattgattcgtcatcaaatgttctttaagcatgacataaatatttt 57
>RF01062;MIR812;AAAA02030270.1/30556-30384 39946:Oryza sativa Indica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 34 actttttaacaancgtttgnccttttgtcttattaacaa-aattatgtaattatcattta 92
||||||| || | |||||| || || || ||||||| || |||||||||||||| |||||
Sbjct: 172 actttttgaccaacgtttgaccattcgtattattaaaaataattatgtaattattattta 113
Query: 93 ttttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|| |||||| | ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 112 ttgtattgtgatttgatttatcatcaaatgttctttaagcatgacatcaatattttt 56
>RF01062;MIR812;AAAA02041955.1/612-783 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 62 cttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
|||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||
Sbjct: 143 cttattaaaaaaattatgtaattatcatttattttattatgacttgattcgtcatcaaat 84
Query: 122 gttctttaagcatgacataagtatttt 148
| ||||| |||||||||||| ||||||
Sbjct: 83 gctctttgagcatgacataaatatttt 57
>RF01062;MIR812;AACV01030556.1/490-318 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 66 ttaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc 125
|||| ||| |||| ||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 139 ttaaaaaatttatataattattatttattttattgtgacttgatttatcatcaaatgttc 80
Query: 126 tttaagcatgacataagtatttt 148
||||||||||| |||| ||||||
Sbjct: 79 tttaagcatgatataaatatttt 57
>RF01062;MIR812;AP004254.3/49893-50064 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||||| | |||||| || || |||||||| | |||||| ||||||| |||||||
Sbjct: 172 gactttttaaccaacgtttgaccattcgtcttattcaaaaaatttatgtaatcatcattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||||| ||| |||||||||||||||| || ||||||||||||||| ||| ||||||
Sbjct: 112 attttactgtgacttgatttatcatcacatattctttaagcatgacctaaatatttt 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||| |||||||||||||||||||||
Sbjct: 135 ttgaataagacgaatggtcaaacgttggttaaaaagtc 172
>RF01062;MIR812;AAAA02006482.1/6730-6901 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 81 aattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatgacata 140
||||||||||||||||| ||| |||||||| | ||||||| ||||||||||||||||||
Sbjct: 124 aattatcatttattttactgtgacttgattcgttatcaaatattctttaagcatgacata 65
Query: 141 agtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaa 200
| ||||||| |||||||| |||||||| | |||||||||||||||||| ||||
Sbjct: 64 aatatttttatatttgcataaaaaatttgaataaaacgaatgatcaaacgttggtcaaaa 5
Query: 201 agtc 204
||||
Sbjct: 4 agtc 1
>RF01058;MIR806;AAAA02005201.1/5404-5641 39946:Oryza sativa Indica
Group
Length = 238
Score = 111 bits (56), Expect = 5e-24
Identities = 187/232 (80%), Gaps = 4/232 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||||| || |||||| | | |||||| || || || |
Sbjct: 7 cctccatattttaatgtatgacgccgttaacttttcgtccaacgtttgaccattcgttta 66
Query: 65 attaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgt 123
||| | ||| || ||||||||||||||||||||||||| || ||| ||||| |||| |
Sbjct: 67 attcaaaaattttatgtaattatcatttattttattgtgac---attcatcattaaatat 123
Query: 124 tctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatga 183
||||||| |||||||||| |||||| |||| || || ||||| | ||||
Sbjct: 124 tctttaaacatgacataaatattttcatattttcacaaaatatttaaataaaacgaatcg 183
Query: 184 tcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 184 tcaaacgttgtttaaaaagtcaacggcgtaatacattaaaatacggagggag 235
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 178 gaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagg 232
||||| ||||||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 61 gaatggtcaaacgttggacgaaaagttaacggcgtcatacattaaaatatggagg 7
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
|||||||||||||||||||| ||||| ||||||||||||
Sbjct: 233 ccctccgtattttaatgtattacgccgttgactttttaa 195
>RF01058;MIR806;AACV01022518.1/19044-18804 39947:Oryza sativa
Japonica Group
Length = 241
Score = 111 bits (56), Expect = 5e-24
Identities = 182/226 (80%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 11 tattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaac 70
||||||||||||||||| | ||||||||| | | |||||| | || |||||||| |
Sbjct: 13 tattttaatgtatgacgtcgttgacttttcgtccaacgtttgactattcgtcttatttaa 72
Query: 71 aaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatgttcttta 129
|| ||| ||| |||||| |||||||||||||| || ||||| |||||||||| |||||||
Sbjct: 73 aatatttatgaaattattatttattttattgtgacctgattcatcatcaaatattcttta 132
Query: 130 agcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaac 189
|| ||||||||| || ||| |||| || |||||||| | | ||| ||| ||
Sbjct: 133 agaatgacataaataatttcatatttctataaaatttttgaataaaacggatggtcatac 192
Query: 190 gttggttaaaaagtcaacggcgtcatacattaaaatacggagggag 235
|||| | |||||||||||||||||||| ||||||||||||||||||
Sbjct: 193 gttgatgaaaaagtcaacggcgtcatatattaaaatacggagggag 238
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgg 229
||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 69 aataagacgaatagtcaaacgttggacgaaaagtcaacgacgtcatacattaaaatatga 10
Query: 230 agggag 235
||||||
Sbjct: 9 agggag 4
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgacttttt 40
|||||||||||||||| ||||||||| ||||||||||
Sbjct: 236 ccctccgtattttaatatatgacgccgttgacttttt 200
>RF01062;MIR812;AAAA02011011.1/6798-6968 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 101/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 35 ctttttaacaancgtttgnccttttgtcttattaacaaaat-tatgtaattatcatttat 93
||||||| | | |||||| || || |||||||| | ||||| ||||| ||||||||||||
Sbjct: 169 ctttttatccaacgtttgaccattcgtcttatttaaaaaatgtatgtcattatcatttat 110
Query: 94 tttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||| |||||||| ||||||||||||| ||||| |||||||||| |||||||
Sbjct: 109 tttattgtgacttgattcatcatcaaatgttatttaaacatgacataaatattttt 54
>RF01062;MIR812;AAAA02003171.1/14645-14472 39946:Oryza sativa Indica
Group
Length = 174
Score = 109 bits (55), Expect = 2e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 133 aaaattatataattatcatttattttattgtgacttgattcatcatcaaatattctttaa 74
Query: 131 gcatgacataagtatttt 148
| |||| |||||||||||
Sbjct: 73 gtatgatataagtatttt 56
>RF01062;MIR812;AAAA02029036.1/5658-5486 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 134 aaaattatgtaattatcatttattttattatgacttgatttatcatcaaatgttcattaa 75
Query: 131 gcatgacataagtatttt 148
|||| || ||| ||||||
Sbjct: 74 gcataacgtaaatatttt 57
>RF01062;MIR812;AP004867.2/3436-3609 39947:Oryza sativa Japonica
Group
Length = 174
Score = 109 bits (55), Expect = 2e-23
Identities = 92/104 (88%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaa--ttatgtaattatcatttattttattgtnac 104
|||||| || || |||||||||| |||| |||||||||| |||||||||||||||| ||
Sbjct: 160 cgtttgaccattcgtcttattaaaaaaaggttatgtaattgtcatttattttattgtgac 101
Query: 105 ttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
|| ||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 100 ttaattcatcatcaaatgttctttaagcatgacatgaatatttt 57
>RF01058;MIR806;ABRL01000026.1/41343-41095 65489:Oryza barthii
Length = 249
Score = 109 bits (55), Expect = 2e-23
Identities = 184/228 (80%), Gaps = 3/228 (1%)
Strand = Plus / Plus
Query: 5 cctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtctt 64
||||| ||||||||||||||||| | |||||||||| | |||||| || || |||||
Sbjct: 7 cctccatattttaatgtatgacgtcgttgactttttgttcaacgtttgaccattcgtctt 66
Query: 65 att--aacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
||| || |||||||||||| ||||| |||||| || | |||||||| ||||||||||
Sbjct: 67 attcaaaaaaaattatgtaactatca-ttatttcgttatgacttgattcgtcatcaaatg 125
Query: 123 ttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatg 182
|||||||||| |||||| |||||| |||| ||| || ||||| | |||||
Sbjct: 126 ttctttaagctgaacataaatattttcatatttacataaaattttttaataaaacgaatg 185
Query: 183 atcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacgga 230
|||||||||| || |||||||||||||||| ||||||||||||||||
Sbjct: 186 gtcaaacgttgattgaaaagtcaacggcgtcgtacattaaaatacgga 233
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacgttgaacaaaaagtcaacgacgtcatacattaaaata 13
Query: 227 cggagg 232
|||||
Sbjct: 12 tggagg 7
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tccgtattttaatgtatgacgccattgactttt 39
|||||||||||||||| |||||| |||||||||
Sbjct: 233 tccgtattttaatgtacgacgccgttgactttt 201
>RF01062;MIR812;AAAA02001591.1/31970-31799 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 133 aaaattatgtaattgtcatttattttattgtgacttgattcatcatcaaatgttctttaa 74
Query: 131 gcatgacataagtatttttgcatttgcat 159
|| ||| |||| || |||| ||||||||
Sbjct: 73 gcgtgatataaataattttatatttgcat 45
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 170 aataagatgaatgatcaaacgttggttaaaaa 201
||||| ||||||||||||||||||| ||||||
Sbjct: 138 aataaaatgaatgatcaaacgttggataaaaa 169
>RF01062;MIR812;AAAA02020284.1/2746-2575 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 60 gtcttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaa 119
|||||||||| |||| ||||||||||| |||||||||| ||| |||||||| ||||| ||
Sbjct: 145 gtcttattaaaaaaaatatgtaattattatttattttactgtgacttgattcatcattaa 86
Query: 120 atgttctttaagcatgacataagtatttt 148
|||||||||||| ||||||||| ||||||
Sbjct: 85 atgttctttaagtatgacataaatatttt 57
>RF01062;MIR812;AACV01008452.1/4768-4939 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 80 taattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatgacat 139
||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 125 taattattatttattttattgtgacttgattcatcatcaaatgttctttaagcatgacat 66
Query: 140 aagtatttt 148
|| ||||||
Sbjct: 65 aaatatttt 57
>RF01062;MIR812;ABRL01001991.1/1312-1138 65489:Oryza barthii
Length = 175
Score = 107 bits (54), Expect = 7e-23
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttc-tttaagca 133
||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||
Sbjct: 131 ttatgtaattatcatttattttattgtgacttaattcttcatcaaatgttcttttaagca 72
Query: 134 tgacataagtatttttgcatttgca 158
|||||||||||||||| |||||||
Sbjct: 71 tgacataagtatttttatatttgca 47
>RF01062;MIR812;AAAA02004941.1/51700-51872 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 121/145 (83%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 61 tcttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaaa 120
||||||| | ||| |||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 145 tcttatttaaaaatttatataattatcatttattttattgtgacttgattcatcatcaaa 86
Query: 121 t-gttctttaagcatgacataagtatttttgcatttgcatnnnnnnnttgaataagatga 179
| || |||||||||||||||| |||||| |||||||| |||||| ||| ||
Sbjct: 85 tatttttttaagcatgacataaatattttcatatttgcataaaaattttgaatcagacga 26
Query: 180 atgatcaaacgttggttaaaaagtc 204
||| ||||||||||| |||||||||
Sbjct: 25 atggtcaaacgttggataaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtc 204
||||||||||||||||||||||||| |||||||||
Sbjct: 139 aataagatgaatgatcaaacgttggataaaaagtc 173
>RF01062;MIR812;AAAA02032164.1/21937-21766 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| || |
Sbjct: 129 ttatgtaattatcatttattttatttttacttgatttatcatccaatgttctttaggcct 70
Query: 135 gacataagtatttttgcatttgca 158
||||||| ||||||| |||||||
Sbjct: 69 gacataaatatttttatatttgca 46
>RF01062;MIR812;AAAA02023149.1/17590-17762 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||||| |||||| ||||| |||| |||||||||||||| |||
Sbjct: 159 cgtttgaccattcgtcttattaaaaaaatttatgtatttattatttattttattgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttt 148
| ||| ||||||||||||||||||||||| |||||| ||||||
Sbjct: 99 taattcatcatcaaatgttctttaagcataacataaatatttt 57
>RF01062;MIR812;AAAA02022393.1/97543-97713 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaattatgtaattatcatttattttattgtnactt 106
|||||| || ||| ||||||||| ||||| || |||||||||||||||||||| | ||||
Sbjct: 157 cgtttgaccgtttatcttattaaaaaaat-atataattatcatttattttattatgactt 99
Query: 107 gatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||| |||||||||| | ||||||||||||||||| |||||||
Sbjct: 98 gattcatcatcaaatatcctttaagcatgacataaatattttt 56
>RF01062;MIR812;AAAA02030073.1/8952-8781 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||| ||||||||| | | |||| |||||||||||||||||||||||
Sbjct: 130 ttatgtaattatcatttgttttattgtgattggattcatcatcaaatgttctttaagcat 71
Query: 135 gacataagtatttttgcatttgca 158
||||||| ||||||| |||||||
Sbjct: 70 gacataaatatttttatatttgca 47
>RF01062;MIR812;AAAA02019079.1/7494-7665 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 102/118 (86%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
||||||||||| | ||| || || || |||||| | | |||||| ||||| | |||||||
Sbjct: 172 gactttttaaccaacgtatgaccattcgtcttaatcaaaaaatttatgtagtaatcattt 113
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
|||||||||| |||||||||||||||||||||| ||||||||| |||||| |||||||
Sbjct: 112 attttattgtgacttgatttatcatcaaatgttttttaagcattacataaatattttt 55
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||| ||||| ||||| ||| |||||||||||||||||
Sbjct: 135 ttgattaagacgaatggtcatacgttggttaaaaagtc 172
>RF01062;MIR812;AC108498.2/26528-26356 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || || |||||||| | |||||| | ||||||||||||||||||||||| |||
Sbjct: 159 cgtttgaccattcgtcttattcaaaaaatttaagtaattatcatttattttattgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttt 148
||||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 99 tgattcgtcatcaaatgttctttaaacatgacataaatatttt 57
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtc 204
|||||||||| ||||| ||||||||||| ||||||||
Sbjct: 136 ttgaataagacgaatggtcaaacgttggacaaaaagtc 173
>RF01062;MIR812;AP005824.4/105396-105568 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 102/118 (86%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaatt-atgtaattatcattt 91
|||||||||| | |||||| || ||||||||||| | |||||| |||| ||||||||||
Sbjct: 173 gactttttaatcaacgtttgaccatttgtcttattcaaaaaatttatgttattatcattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtattttt 149
||||||| | |||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct: 113 attttatcttgacttgatttatcatcaaatgttctttaaacatgctataaatattttt 56
>RF01062;MIR812;AP008210.1/15543536-15543708 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaatt-atgtaattatcatttattttattgtnact 105
|||||| || ||||||||||| | ||| || | |||||||||||||||||||| || |||
Sbjct: 159 cgtttgaccatttgtcttattcaaaaagtttacgtaattatcatttattttatcgtgact 100
Query: 106 tgatttatcatcaaatgttctttaagcatgacataagtatttt 148
| ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 99 ttattcatcatcaaatgttctttaagcatgacataaatatttt 57
>RF01062;MIR812;AP005309.5/152341-152170 39947:Oryza sativa Japonica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 73 aattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagc 132
||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||
Sbjct: 131 aattatgtaattatcatttattttattgtgacttgattcatcaccaaatattctttaagc 72
Query: 133 atgacataagtatttt 148
||| ||||| ||||||
Sbjct: 71 atggcataaatatttt 56
>RF01062;MIR812;AAAA02000518.1/1078-1249 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 87/99 (87%)
Strand = Plus / Minus
Query: 60 gtcttattaacaaaattatgtaattatcatttattttattgtnacttgatttatcatcaa 119
|||||||| | ||| |||||||||||| |||||||||||| | |||||||| | |||||
Sbjct: 145 gtcttatttaaaaagttatgtaattattatttattttattatgacttgattcgttatcaa 86
Query: 120 atgttctttaagcatgacataagtatttttgcatttgca 158
|||||||||||||||||||||| ||||||| |||||||
Sbjct: 85 atgttctttaagcatgacataaatatttttatatttgca 47
>RF01062;MIR812;AP008207.1/38705048-38704875 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 43 caancgtttgnccttttgtcttattaacaaaa--ttatgtaattatcatttattttattg 100
||| |||||| || || |||||||| | |||| |||||||||||||||||||||||||
Sbjct: 163 caaacgtttgaccattcgtcttatttaaaaaaatttatgtaattatcatttattttatta 104
Query: 101 tnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
| ||||||||| | ||||||| ||||||||||||||||||| ||||||
Sbjct: 103 tgacttgatttgttatcaaatattctttaagcatgacataaatatttt 56
>RF01062;MIR812;AP004000.3/7786-7960 39947:Oryza sativa Japonica
Group
Length = 175
Score = 103 bits (52), Expect = 1e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 134 aaaaatatgtaattattatttattttaatgtgacttgatttatcatcaaatgttctttaa 75
Query: 131 gcatgacataagtattttt 149
|||||| ||| |||||||
Sbjct: 74 gcatgatttaaatattttt 56
>RF01062;MIR812;AL732647.4/43375-43205 4530:Oryza sativa (rice)
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 47 cgtttgnccttttgtcttattaacaaaattatgtaattatcatttattttattgtnactt 106
|||||| || ||||||||||||| |||||||||||||||| |||||||||||| | ||||
Sbjct: 157 cgtttgaccatttgtcttattaaaaaaattatgtaattattatttattttattatgactt 98
Query: 107 gatttatcatcaaatgtt 124
|||||||||| |||||||
Sbjct: 97 gatttatcattaaatgtt 80
>RF01062;MIR812;AAAA02020697.1/24929-24757 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 101/117 (86%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 33 gactttttaacaancgtttgnccttttgtcttattaacaaaa-ttatgtaattatcattt 91
||||||||| | | |||||| || || |||||||||| |||| ||||||| || |||||
Sbjct: 173 gactttttatccaacgtttgaccattcgtcttattaaaaaaaattatgtagctaccattt 114
Query: 92 attttattgtnacttgatttatcatcaaatgttctttaagcatgacataagtatttt 148
|||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 113 atttcattgtgacttgattcgtcatcaaatgttctttaagcatgacataattatttt 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 170 aataagatgaatgatcaaacgttggttaaaaagtc 204
||||||| ||||| ||||||||||| |||||||||
Sbjct: 139 aataagacgaatggtcaaacgttggataaaaagtc 173
>RF01062;MIR812;AC137586.3/138691-138863 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||
Sbjct: 130 ttatgtaattatcatttatttcattatgacttgatttatcatcaaatattctttaagcat 71
Query: 135 gacataagtattttt 149
| ||||| |||||||
Sbjct: 70 ggcataaatattttt 56
>RF01062;MIR812;AAAA02014525.1/18598-18770 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||||
Sbjct: 130 ttatgtaattatcatttattttactgtaacttgatttatcgtcaaatgttttttaagcat 71
Query: 135 gacataagtattttt 149
|| |||| |||||||
Sbjct: 70 gatataaatattttt 56
>RF01062;MIR812;AP008214.1/21949687-21949860 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||||| || ||||||||| | |||| ||||||||||||
Sbjct: 130 ttatgtaattatcatttattttattgtgacctgatttatccttaaattttctttaagcat 71
Query: 135 gacataagtattttt 149
||||||| |||||||
Sbjct: 70 gacataaatattttt 56
>RF01062;MIR812;AAAA02000756.1/2459-2630 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||| ||||||||||||||||| || ||||||||||||||||||| ||||||||||||
Sbjct: 129 ttatgttattatcatttattttatcgtgacttgatttatcatcaaatattctttaagcat 70
Query: 135 gacataagtattttt 149
|| |||| |||||||
Sbjct: 69 gatataaatattttt 55
>RF01062;MIR812;AP008207.1/5500684-5500511 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 76 tatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatg 135
|||||||||||||||||||||| ||| |||||||| || ||||||||| |||||||||||
Sbjct: 129 tatgtaattatcatttattttaatgtgacttgattcattatcaaatgtcctttaagcatg 70
Query: 136 acataagtatttttgcatttgca 158
|||||| ||||||| |||||||
Sbjct: 69 acataaatatttttatatttgca 47
>RF01062;MIR812;AC232165.1/73778-73613 63629:Oryza minuta
Length = 166
Score = 103 bits (52), Expect = 1e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 71 aaaattatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaa 130
|||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 131 aaaaatatataattattatttattttattgtgacttgatttatcatcaaatgttctttaa 72
Query: 131 gcatgac 137
|||||||
Sbjct: 71 gcatgac 65
>RF01062;MIR812;AACV01003412.1/9433-9261 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||| ||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 131 ttatataattattatttattttattgtaacttaattcatcatcaaatgttctttaagcat 72
Query: 135 gacataagtattttt 149
||||||| |||||||
Sbjct: 71 gacataaatattttt 57
>RF01058;MIR806;AACV01010753.1/1240-1000 39947:Oryza sativa Japonica
Group
Length = 241
Score = 103 bits (52), Expect = 1e-21
Identities = 128/156 (82%)
Strand = Plus / Plus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||| |||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 78 ttatgtaactatcatttattttattgtgacttgattcgtcatcaaatgttctttaagttg 137
Query: 135 gacataagtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttgg 194
|||||| ||||||| ||||||| ||||||| | ||||| ||||||||||
Sbjct: 138 aacataaatatttttatatttgcacaaaatttctgaataaaacgaatggtcaaacgttga 197
Query: 195 ttaaaaagtcaacggcgtcatacattaaaatacgga 230
| |||||| |||||| |||||||||||||||||||
Sbjct: 198 tcgaaaagttaacggcatcatacattaaaatacgga 233
>RF01058;MIR806;AACV01023860.1/22450-22690 39947:Oryza sativa
Japonica Group
Length = 241
Score = 103 bits (52), Expect = 1e-21
Identities = 122/145 (84%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaacaancgtttgnccttttgtct 63
|||| ||||||||||||||||| ||| | |||||||||| | ||| || || || ||||
Sbjct: 6 cccttcgtattttaatgtatgatgccgtagactttttaatcaacgtgtgaccattcgtct 65
Query: 64 tattaacaaaatt-atgtaattatcatttattttattgtnacttgatttatcatcaaatg 122
|||| | |||||| |||| |||||||| |||||||| || ||| ||| ||||||||||||
Sbjct: 66 tattcaaaaaatttatgttattatcatatattttatcgtgactagatatatcatcaaatg 125
Query: 123 ttctttaagcatgacataagtattt 147
|||||||| ||||| |||| |||||
Sbjct: 126 ttctttaaacatgatataaatattt 150
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
|||||||||| ||||| ||| |||||| |||||||||| ||||| |||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcacacgttgattaaaaagtctacggcatcatacattaaaata 13
Query: 227 cggagggag 235
|| ||||||
Sbjct: 12 cgaagggag 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 4 ccctccgtattttaatgtatgacgccattgactttttaa 42
|||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 236 ccctccatattttaatatatgacgccgttgactttttaa 198
>RF01062;MIR812;AAAA02004838.1/24428-24253 39946:Oryza sativa Indica
Group
Length = 176
Score = 101 bits (51), Expect = 4e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||
Sbjct: 130 ttatgtaattattatttattttattgtgatttgattcgtcatcaaatgttctttaagcat 71
Query: 135 gacataagtatttt 148
||||||| ||||||
Sbjct: 70 gacataaatatttt 57
>RF01062;MIR812;AAAA02022123.1/4614-4786 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 4e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 130 ttatataattatcctttattttattgtgacttgatttgttatcaaatgttctttaagcat 71
Query: 135 gacataagtatttt 148
||||||| ||||||
Sbjct: 70 gacataaatatttt 57
>RF01062;MIR812;AP008212.1/1706903-1706731 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 4e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||
Sbjct: 129 ttatgtaattatcatttattttattatgacttgattcgtcattaaatgttctttaagcat 70
Query: 135 gacataagtatttt 148
||||||| ||||||
Sbjct: 69 gacataaatatttt 56
>RF01062;MIR812;AACV01002982.1/10683-10855 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 4e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttattgtnacttgatttatcatcaaatgttctttaagcat 134
|||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||
Sbjct: 130 ttatgtaattatcatttaatttattgtgccttgattcatcatcaaatgttctttaagcat 71
Query: 135 gacataagtatttt 148
|| |||| ||||||
Sbjct: 70 gatataaatatttt 57
>RF01062;MIR812;AAAA02022094.1/9064-9251 39946:Oryza sativa Indica
Group
Length = 188
Score = 101 bits (51), Expect = 4e-21
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 82 attatcatttattttattgtnacttgatttatcatcaaatgttctttaagcatgacataa 141
|||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct: 123 attatcatttattttattatgacttgattcgtcatcaaatgttctttaagcatgacataa 64
Query: 142 gtatttttgcatttgcatnnnnnnnttgaataagatgaatgatcaaacgttggttaaaaa 201
||||||| ||||||| |||||||||| ||||| |||| ||||||| ||||
Sbjct: 63 atatttttatatttgcacaaaaattttgaataagacgaatggtcaagcgttggtcgaaaa 4
Query: 202 gtc 204
|||
Sbjct: 3 gtc 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 75 ttatgtaattatcatttattttatt 99
|||||||||||||||||||||||||
Sbjct: 145 ttatgtaattatcatttattttatt 121
