miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00239;mir-124;AAWT01073305.1/601-525 79327:Schmidtea
mediterranea
Length = 77
Score = 153 bits (77), Expect = 5e-37
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 8 aattattctactgccattctcagttggagtcttgatatgatctattaaggcacgctgtga 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattattctactgccattctcagttggagtcttgatatgatctattaaggcacgctgtga 60
Query: 68 atgccaaggaattttat 84
|||||||||||||||||
Sbjct: 61 atgccaaggaattttat 77
>RF00239;mir-124;AAGJ02120869.1/14315-14397
7668:Strongylocentrotus purpuratus
Length = 83
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaagg 76
|||||||||||| |||||||||||||
Sbjct: 49 attaaggcacgcggtgaatgccaagg 74
>RF00239;mir-124;AABS01000310.1/18932-18854 7719:Ciona
intestinalis
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 taaggcacgctgtgaatgccaaggaatttt 82
|||||||||| ||||||||||| |||||||
Sbjct: 48 taaggcacgcggtgaatgccaacgaatttt 77
