miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 220 bits (111), Expect = 7e-57
Identities = 201/233 (86%), Gaps = 2/233 (0%)
Strand = Plus / Minus
Query: 11 tactacctccgttctattataagtgcagc-atgtttttccgcgttcaactttgaccatcc 69
|||| ||||||| |||||||||||||||| || |||||||||| ||||||| ||| |||
Sbjct: 239 tactgcctccgtcctattataagtgcagccatagttttccgcgtccaactttaaccgtcc 180
Query: 70 gtcttatttaagannnnnnngaaaaaatttaaaaacataagtcacgagtaaagtactatt 129
||||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 179 gtcttatttaaaaattttttgaaaaaatttaaaaatataagtcacgagtaaagtactatt 120
Query: 130 tatgttttatcatctcataacaacaaaaatactaattatnnnnnnnttttaaataagacg 189
|||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 119 catgttttatcatctcataacaataaaaatactaattataaaaaaa-tttaaataagacg 61
Query: 190 aacggtcaaaattgggcgcggatacttatggttgtacttataatgggacggag 242
|||| | ||||||||||||||| ||||||||||| |||| |||||||||||||
Sbjct: 60 aacgattaaaattgggcgcggaaacttatggttgcacttgtaatgggacggag 8
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcggatacttatggttgtacttataatgg 235
|||||||||||||| ||||| ||| |||| |||||| | ||||| || ||||||||| |
Sbjct: 167 ttttaaataagacggacggttaaagttggacgcggaaaactatggctgcacttataatag 226
Query: 236 gacggag 242
|||||||
Sbjct: 227 gacggag 233
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 192 bits (97), Expect = 2e-48
Identities = 141/158 (89%)
Strand = Plus / Minus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 100
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|||||||||||||||||| ||| |||||||||| ||| ||||||||||| |||
Sbjct: 99 aacaaaaatactaattataaaaaaatttcaaataagacggacgatcaaaattgggtacgg 40
Query: 211 atacttatggttgtacttataatgggacggagagagta 248
| ||||||||||| | ||| |||||||||||| |||||
Sbjct: 39 aaacttatggttgcatttaaaatgggacggagggagta 2
>RF01062;MIR812;AACV01025132.1/10868-10698 39947:Oryza sativa
Japonica Group
Length = 171
Score = 163 bits (82), Expect = 2e-39
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattggg 205
|||||||||||||||||| ||| |||||||||| ||| |||||||||||
Sbjct: 108 aacaaaaatactaattataaaaaaatttcaaataagacggacgatcaaaattggg 162
>RF01062;MIR812;AAAA02013232.1/6308-6477 39946:Oryza sativa Indica
Group
Length = 170
Score = 161 bits (81), Expect = 6e-39
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 46 gaaaaaatttaaaaacataagtcacgagtaaaatactatttatgttttatcatctcataa 105
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
||||||||||||||||||| |||||||||||||| ||| |||||||| ||| ||
Sbjct: 106 caacaaaaatactaattattattattttttaaataagacggacgatcaaaattaggcacg 165
Query: 210 ga 211
||
Sbjct: 166 ga 167
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 133/153 (86%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 160 gaaaaaatttaaaaacataagtcacgagtaaaatactattcatgttttatcatctcataa 101
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
||||||||||||||||||| ||| |||||||||| ||| |||||||||| | ||
Sbjct: 100 caacaaaaatactaattataaaaagttttcaaataagacggacgatcaaaattggacacg 41
Query: 210 gatacttatggttgtacttataatgggacggag 242
|| ||| | |||| ||||| ||||||||||||
Sbjct: 40 gaaactcacagttgcacttaaaatgggacggag 8
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 157 bits (79), Expect = 9e-38
Identities = 192/233 (82%), Gaps = 1/233 (0%)
Strand = Plus / Minus
Query: 11 tactacctccgttctattataagtgcagc-atgtttttccgcgttcaactttgaccatcc 69
|||| ||||||| ||||| |||||||||| ||| ||||||||| ||||||||| | |||
Sbjct: 240 tactccctccgtcctattttaagtgcagccatggttttccgcgcccaactttgatcgtcc 181
Query: 70 gtcttatttaagannnnnnngaaaaaatttaaaaacataagtcacgagtaaagtactatt 129
|||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atcttatttgaaaaaagttaaaaaaaatttaaaaacataagtcacgagtaaagtactatt 121
Query: 130 tatgttttatcatctcataacaacaaaaatactaattatnnnnnnnttttaaataagacg 189
|||||||||||||||||||||| ||||||||||||||| || ||||||||||
Sbjct: 120 catgttttatcatctcataacaaaaaaaatactaattataaaaaaaattcaaataagacg 61
Query: 190 aacggtcaaaattgggcgcggatacttatggttgtacttataatgggacggag 242
||| ||||| |||| |||||| ||| ||||| ||||| ||||||||||||
Sbjct: 60 gacgatcaaagttggacgcggaaactcgtggttacacttaaaatgggacggag 8
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 45 tttccgcgttcaactttgaccatccgtcttattt 78
||||||||| ||||||||| | ||||||||||||
Sbjct: 37 tttccgcgtccaactttgatcgtccgtcttattt 70
>RF01062;MIR812;AAAA02017459.1/30794-30625 39946:Oryza sativa Indica
Group
Length = 170
Score = 151 bits (76), Expect = 6e-36
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgaataaaatactatttatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcg 207
|||||||||||||||||| |||||||||||||||||| ||||| |||||||
Sbjct: 107 aacaaaaatactaattataaaaaaattttaaataagacgaacgatcaaatttgggcg 163
>RF01062;MIR812;AAAA02027930.1/20244-20415 39946:Oryza sativa Indica
Group
Length = 172
Score = 151 bits (76), Expect = 6e-36
Identities = 102/113 (90%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattg 203
|||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 109 aacaaaaatactaattataaaaaatttttaaataagacggacgatcaaaattg 161
>RF01062;MIR812;AAAA02018686.1/12077-11907 39946:Oryza sativa Indica
Group
Length = 171
Score = 147 bits (74), Expect = 9e-35
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
||||||||| ||||||||||| |||||||||||||| | |||||||||||||
Sbjct: 1 ttttccgcgcccaactttgaccgtccgtcttatttaaaaaattttaaaaaaaatttaaaa 60
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||
Sbjct: 61 acataagtcacgagtaaagtactatttatattttatcatctcataacaataaaaatatta 120
Query: 164 attatnnnnnnnttttaaataagacgaacggtcaaa 199
||||| ||| |||||||||||||| |||||
Sbjct: 121 attataaaaaactttcaaataagacgaacgatcaaa 156
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||| ||||||||| |||||||||||
Sbjct: 39 ttttaaataagacggacggtcaaagttgggcgcgga 4
>RF01062;MIR812;AAAA02018660.1/8972-9143 39946:Oryza sativa Indica
Group
Length = 172
Score = 147 bits (74), Expect = 9e-35
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 aaaaaattttaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
>RF01062;MIR812;AACV01020594.1/1986-2157 39947:Oryza sativa Japonica
Group
Length = 172
Score = 147 bits (74), Expect = 9e-35
Identities = 109/123 (88%)
Strand = Plus / Plus
Query: 46 ttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaac 105
|||| ||||||||||||||| | |||||||||||| | ||||||| ||||||||
Sbjct: 3 ttcctcgttcaactttgaccgttcgtcttatttaaaaattttttgaaaaaaattaaaaac 62
Query: 106 ataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 63 ataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatgctaat 122
Query: 166 tat 168
|||
Sbjct: 123 tat 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaa 199
||||||||||||||||||||||||
Sbjct: 39 ttttaaataagacgaacggtcaaa 16
>RF01062;MIR812;AAAA02004388.1/22484-22653 39946:Oryza sativa Indica
Group
Length = 170
Score = 145 bits (73), Expect = 4e-34
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 46 gaaaaaatttaaaaacataagtcacaagtaaagtactattcatgttttatcatctcataa 105
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||| |||||||| ||| |||||||||| ||| ||||||||| |||||
Sbjct: 106 caacaaaaatgctaattataaaaaaatttcaaataagacggacgatcaaaattgagcgcg 165
Query: 210 ga 211
||
Sbjct: 166 ga 167
>RF01062;MIR812;AAAA02014084.1/6055-5884 39946:Oryza sativa Indica
Group
Length = 172
Score = 143 bits (72), Expect = 1e-33
Identities = 107/121 (88%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttattatctcataac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|||||||||| ||||||| |||||||||||||||||| ||||| | ||||||||
Sbjct: 109 aacaaaaatattaattatacaaaatttttaaataagacgaacgatcaaagtggggcgcgg 168
Query: 211 a 211
|
Sbjct: 169 a 169
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 143 bits (72), Expect = 1e-33
Identities = 107/121 (88%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacataagttacgagtaaagtactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| | ||||||||||||| |||||||||||||||||| ||||| || |||||||
Sbjct: 109 aatataaatactaattataaaaaaattttaaataagacgaacgatcaaagttaggcgcgg 168
Query: 211 a 211
|
Sbjct: 169 a 169
>RF01062;MIR812;AC119073.1/10812-10640 39947:Oryza sativa Japonica
Group
Length = 173
Score = 141 bits (71), Expect = 6e-33
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 48 gaaaaaatttaaaaacataagtcatgagtaaagtactatttatattttatcatctcataa 107
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 108 caacaaaaatactaattat 126
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 141 bits (71), Expect = 6e-33
Identities = 97/108 (89%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 40 aaaaatttaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataaca 99
Query: 152 acaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
| ||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 100 ataaaaatactaattataaaaaaattttaaataagacggacgatcaaa 147
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 141 bits (71), Expect = 6e-33
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 42 gaaaaaatttaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataa 101
Query: 150 caacaaaaatactaattat 168
||| |||||||||||||||
Sbjct: 102 caataaaaatactaattat 120
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 141 bits (71), Expect = 6e-33
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aaaaaaattaaaaacagaagtcacgagtaaagtactatttatgttttatcatctcataac 100
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| |||||| |||||||| ||| |||||||||| ||| |||||||||||||| |
Sbjct: 99 aataaaaatgctaattataaaaaaatttcaaataagacggacgatcaaaattgggcgcag 40
Query: 211 atacttatggttgtacttataatgggacggag 242
| ||| |||| || ||||| ||||||||||
Sbjct: 39 aaactcatggctgcgcttattttgggacggag 8
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 180 aaataagacgaacggtcaaaattgggcgc 208
|||||||||||||||||||| ||||||||
Sbjct: 172 aaataagacgaacggtcaaagttgggcgc 200
>RF01062;MIR812;AP008217.1/4350763-4350922 39947:Oryza sativa
Japonica Group
Length = 160
Score = 139 bits (70), Expect = 2e-32
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 37 aaaaaatttaaaaacataagtcacgagtaaagtaccattcatgttttatcatctcataac 96
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 97 aacaaaaatactaattat 114
>RF01062;MIR812;AJ245900.1/3175-3343 4530:Oryza sativa (rice)
Length = 169
Score = 139 bits (70), Expect = 2e-32
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgagcaaagtactatttatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AP008208.1/25944725-25944560 39947:Oryza sativa
Japonica Group
Length = 166
Score = 137 bits (69), Expect = 9e-32
Identities = 104/118 (88%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacagaagtcacgagtaaagtactatttatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgc 208
|| |||||| |||||||| ||| |||||||||| ||| ||||||||||||||
Sbjct: 107 aataaaaatgctaattataaaaaaatttcaaataagacggacgatcaaaattgggcgc 164
>RF01062;MIR812;AP003808.3/36375-36546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 137 bits (69), Expect = 9e-32
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 55 caactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaacataagtcac 114
|||||||||| ||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 13 caactttgactatccgtcttatttaaattttttctgaaaaaaattaaaaacataagtcac 72
Query: 115 gagtaaagtactatttatgttttatcatctcataacaacaaaaatactaattatnnnnnn 174
|| |||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 73 gaataaaatactatttatattttatcatctcataacaacaaaaatactaattataaattt 132
Query: 175 nttttaaataagacgaacggtcaaaattgggcgcg 209
||| ||||| |||| ||| |||||||||||||||
Sbjct: 133 ttttcaaatatgacggacgatcaaaattgggcgcg 167
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 137 bits (69), Expect = 9e-32
Identities = 167/203 (82%), Gaps = 1/203 (0%)
Strand = Plus / Minus
Query: 10 gtactacctccgttctattataagtgcagc-atgtttttccgcgttcaactttgaccatc 68
||||| ||||||| ||| ||||||||||| || |||||||||| ||||||| ||||||
Sbjct: 241 gtactccctccgtcctaaaataagtgcagccatatttttccgcgcccaactttaaccatc 182
Query: 69 cgtcttatttaagannnnnnngaaaaaatttaaaaacataagtcacgagtaaagtactat 128
|||||||||| | | |||||| ||||||||||||||||| |||||||||||||
Sbjct: 181 cgtcttatttgaaaaaatttttaaaaaaattaaaaacataagtcacaagtaaagtactat 122
Query: 129 ttatgttttatcatctcataacaacaaaaatactaattatnnnnnnnttttaaataagac 188
| |||||||||||||||||| |||||||||| |||||||| |||||||||| ||
Sbjct: 121 tcatgttttatcatctcatagcaacaaaaatgctaattataaaaaaattttaaataaaac 62
Query: 189 gaacggtcaaaattgggcgcgga 211
| || |||||| |||| ||||||
Sbjct: 61 ggacagtcaaagttggacgcgga 39
Score = 54.0 bits (27), Expect = 1e-06
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 11 tactacctccgttctattataagtgcag-catgtttttccgcgttcaactttgaccatcc 69
|||||||||||| || |||||||||| |||| |||||||||| |||||||||| |||
Sbjct: 2 tactacctccgtcttaaaataagtgcagccatggttttccgcgtccaactttgactgtcc 61
Query: 70 gtcttatttaa 80
|| ||||||||
Sbjct: 62 gttttatttaa 72
>RF01062;MIR812;AY946442.1/200-29 4530:Oryza sativa (rice)
Length = 172
Score = 135 bits (68), Expect = 3e-31
Identities = 106/121 (87%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
||||||||| ||||||| |||||||||||||| ||| || || ||||||||||
Sbjct: 109 aacaaaaatgttaattataaattttttttaaataagacggacgatcgaagttgggcgcgg 168
Query: 211 a 211
|
Sbjct: 169 a 169
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcg 207
|||||||||||||||||||| |||||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcg 9
>RF01062;MIR812;AP008215.1/2023967-2023806 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 3e-31
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 aaaaaaattaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataat 97
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
|| ||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 98 aataaaaatactaattataaaaaaatttcaaataagacgaacgatcaaa 146
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||||||||| ||| |||| ||||||
Sbjct: 40 ttttaaataagacgaacggttaaagttggacgcgga 5
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 135 bits (68), Expect = 3e-31
Identities = 124/145 (85%)
Strand = Plus / Minus
Query: 98 ttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaa 157
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 152 ttaaaaacataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaa 93
Query: 158 atactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcggatactta 217
|| |||||||| ||| |||||||||| ||| ||||| || ||||||| |||||
Sbjct: 92 atgctaattataaaaaaatttcaaataagacggacgatcaaagttaagcgcggaaactta 33
Query: 218 tggttgtacttataatgggacggag 242
||| || |||||| ||||||||||
Sbjct: 32 tggctgcacttattttgggacggag 8
>RF01062;MIR812;AAAA02015545.1/24306-24475 39946:Oryza sativa Indica
Group
Length = 170
Score = 133 bits (67), Expect = 1e-30
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 47 gaaaaaatttaaaaacataagtcacgagtaaagtaatactcatgttttatcatctcataa 106
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 107 caacaaaaatactaattat 125
>RF01062;MIR812;AP003922.2/73692-73522 39947:Oryza sativa Japonica
Group
Length = 171
Score = 133 bits (67), Expect = 1e-30
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 47 gaaaaaatttaaaaacataagtcacaagtaaagtactattcatgttttatcatctcataa 106
Query: 150 caacaaaaatactaattat 168
|||||||||| ||||||||
Sbjct: 107 caacaaaaatgctaattat 125
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcgga 211
|||| ||||||||||||||||||| |||||||||||
Sbjct: 40 tttttaataagacgaacggtcaaagttgggcgcgga 5
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 131 bits (66), Expect = 5e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 44 taaaaacataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaa 103
Query: 159 tactaattat 168
||||||||||
Sbjct: 104 tactaattat 113
>RF01062;MIR812;AACV01007418.1/3561-3398 39947:Oryza sativa Japonica
Group
Length = 164
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 42 aaaaaatttaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataac 101
Query: 151 aacaaaaatactaattat 168
|| ||||||| |||||||
Sbjct: 102 aataaaaatattaattat 119
>RF01062;MIR812;AP008213.1/23885583-23885754 39947:Oryza sativa
Japonica Group
Length = 172
Score = 131 bits (66), Expect = 5e-30
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacataagttacgagtaaagtactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacg 193
|| |||||||| |||||| ||||||||||||||||||
Sbjct: 109 aataaaaatacaaattataaaaaatttttaaataagacgaacg 151
>RF01062;MIR812;AACV01014495.1/46718-46548 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 48 aaaaaaattaaaaacataagtcacgagtaaagtactatttatgttttatcatctcatagc 107
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 108 aacaaaaatattaattat 125
>RF01062;MIR812;CR855125.1/94683-94855 4530:Oryza sativa (rice)
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 48 gaaaaaatttaaaaacataagtcacgagtaaagtactattcatgttttatcatttcataa 107
Query: 150 caacaaaaatactaatta 167
|||||||||||| |||||
Sbjct: 108 caacaaaaataccaatta 125
>RF01062;MIR812;AP008214.1/8842812-8842970 39947:Oryza sativa
Japonica Group
Length = 159
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 36 aaaaaaattaaaaacataagtcacgaataaagtactatttatgttttattatctcataac 95
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 96 aacaaaaatactaattat 113
>RF01062;MIR812;AP008211.1/3019166-3019336 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgagtaaagtattattcatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AP005158.3/28303-28131 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatcttataac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AP008216.1/19916558-19916730 39947:Oryza sativa
Japonica Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 50 aaaaaatttaaaaacataagtcacgagtaaaatactatttatattttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 110 aataaaaatactaattat 127
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagcactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||||||||| |||| ||||||
Sbjct: 35 aaataagacgaacggtcaaagttggacgcgga 4
>RF01062;MIR812;AACV01023121.1/33022-33182 39947:Oryza sativa
Japonica Group
Length = 161
Score = 131 bits (66), Expect = 5e-30
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||| |||||| ||||||||||||| | ||||
Sbjct: 38 aaaaaaattaaaaacataagtcacgagtaaagcactattcatgttttatcatcacgtaac 97
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||||||||||| ||| |||||||||| ||| |||||||||||||||
Sbjct: 98 aacaaaaatactaattataaaaaattttcaaataagacggacgatcaaaattgggcgcg 156
>RF01062;MIR812;AP008211.1/24592306-24592476 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 51 cgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaacataag 110
||||||||||||||| | |||||||||||| | ||||||||||||||||||||
Sbjct: 8 cgttcaactttgaccgttcgtcttatttaaaaattttttaaaaaaatttaaaaacataag 67
Query: 111 tcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaattatnn 170
||||||||||| || |||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 68 tcacgagtaaattattattcatgttttatcatctcataacaataaaaatactaattataa 127
Query: 171 nnnnnttttaaataagacgaacggtcaaaattgggc 206
|||||||||||| |||| ||||| ||||||
Sbjct: 128 aaaaattttaaataagaaaaacgatcaaagttgggc 163
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaa 199
||||||||||||||||||||||||
Sbjct: 39 ttttaaataagacgaacggtcaaa 16
>RF01062;MIR812;AAAA02022985.1/2863-2691 39946:Oryza sativa Indica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacataagtgacgagtaaagtactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 109 aacaaaaataataattat 126
>RF01062;MIR812;AP008208.1/15408252-15408424 39947:Oryza sativa
Japonica Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 50 aaaaaacttaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
|||| |||||||||||||
Sbjct: 110 aacacaaatactaattat 127
>RF01062;MIR812;AP008209.1/27052678-27052511 39947:Oryza sativa
Japonica Group
Length = 168
Score = 131 bits (66), Expect = 5e-30
Identities = 111/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 43 tttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaa 102
||||||||||| ||||||| |||||||||||||||||| | ||||||| |||
Sbjct: 1 tttttccgcgt-caactttaaccatccgtcttatttaaaaaaaaattaaaaaaat--aaa 57
Query: 103 aacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatact 162
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 58 aacataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaataat 117
Query: 163 aattat 168
||||||
Sbjct: 118 aattat 123
>RF01062;MIR812;AAAA02022381.1/2540-2699 39946:Oryza sativa Indica
Group
Length = 160
Score = 129 bits (65), Expect = 2e-29
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 36 gaaaaaaattaaaaatataagtcacgagtaaagtactattcatgttttatcatctcataa 95
Query: 150 caacaaaaatactaatt 166
|||||||||||||||||
Sbjct: 96 caacaaaaatactaatt 112
>RF01062;MIR812;AACV01022357.1/25126-24956 39947:Oryza sativa
Japonica Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 48 gaaaaaaattaaaaacataagtcacgagtaaagtagtattcatgttttatcatctcataa 107
Query: 150 caacaaaaatactaatt 166
|||||||||||||||||
Sbjct: 108 caacaaaaatactaatt 124
>RF01062;MIR812;AAAA02011051.1/19891-19721 39946:Oryza sativa Indica
Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 49 aaaaaattaaaaacataagtcacgagtaaagtattatttatgtcttatcatctcataaca 108
Query: 152 acaaaaatactaattat 168
|||||||||||||||||
Sbjct: 109 acaaaaatactaattat 125
>RF01062;MIR812;AAAA02007013.1/4435-4263 39946:Oryza sativa Indica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aaaaaattaaaaacagaagtcacgagtaaagtactatttatgttttatcatctcataaca 109
Query: 152 acaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgc 208
| |||||| |||||||| ||| |||||||||| | | ||||||||||||||
Sbjct: 110 ataaaaatgctaattataaaaaaatttcaaataagacggatgatcaaaattgggcgc 166
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgc 208
|||||||||||||||||||| ||||||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcgc 8
>RF01062;MIR812;AAAA02007290.1/11578-11749 39946:Oryza sativa Indica
Group
Length = 172
Score = 127 bits (64), Expect = 8e-29
Identities = 93/105 (88%)
Strand = Plus / Plus
Query: 98 ttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaa 157
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 56 ttaaaaacataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaa 115
Query: 158 atactaattatnnnnnnnttttaaataagacgaacggtcaaaatt 202
||||||||||| ||| |||||||||| ||| ||||||||
Sbjct: 116 atactaattataaaaaaatttcaaataagacggacgatcaaaatt 160
>RF01062;MIR812;AY946463.1/200-28 4530:Oryza sativa (rice)
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 108/125 (86%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
|||||||||| |||||||||||| |||||||||| | | ||||||| ||||||
Sbjct: 2 ttttccgcgtcaaactttgaccattcgtcttatttgaaaattttttgaaaaaaattaaaa 61
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||
Sbjct: 62 gcataagtcacgagtaaagtactattcatgttttatcatcttataacaataaaaatacta 121
Query: 164 attat 168
|||||
Sbjct: 122 attat 126
>RF01062;MIR812;AP008210.1/22033800-22033629 39947:Oryza sativa
Japonica Group
Length = 172
Score = 127 bits (64), Expect = 8e-29
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacataagtcatgcataaagtaccattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
|||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 109 aacaaaaatactaattataacaaatttttaaataagacgaacgatcaaa 157
>RF01062;MIR812;AACV01002500.1/8556-8389 39947:Oryza sativa Japonica
Group
Length = 168
Score = 127 bits (64), Expect = 8e-29
Identities = 109/125 (87%), Gaps = 4/125 (3%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
|||||||||||||||||| ||| | |||||||||||| | |||||| ||||||
Sbjct: 1 ttttccgcgttcaactttaaccgttcgtcttatttaaaaaaat----aaaaaaattaaaa 56
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 57 atataagtcacgagtaaagtattatttatgttttatcatctcataacaacaaaaatatta 116
Query: 164 attat 168
|||||
Sbjct: 117 attat 121
>RF01062;MIR812;AAHK01024291.1/515-686 5693:Trypanosoma cruzi
Length = 172
Score = 127 bits (64), Expect = 8e-29
Identities = 105/121 (86%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 48 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttattatcttataac 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
||||||||| |||||||| |||||||||||||| ||| ||||| ||| ||||||
Sbjct: 108 aacaaaaatgctaattataaaataattttaaataagacggacgatcaaagttgagcgcgg 167
Query: 211 a 211
|
Sbjct: 168 a 168
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||| ||||||||||||| |||||||||||
Sbjct: 36 aaataatacgaacggtcaaagttgggcgcgga 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 45 tttccgcgttcaactttgaccatccgtcttatttaa 80
|||||||| |||||||||| | ||||||||||||||
Sbjct: 170 tttccgcgctcaactttgatcgtccgtcttatttaa 135
>RF01058;MIR806;AACV01005957.1/12052-12292 39947:Oryza sativa
Japonica Group
Length = 241
Score = 127 bits (64), Expect = 8e-29
Identities = 129/153 (84%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 160 gaaaaaaaataaaaacataagtcacgagtaaagtattattcatgttttatcatcttataa 101
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||| |||||||| ||| |||||| ||||||| ||||| |||| ||||
Sbjct: 100 caacaaaaatgctaattataaaaaaatttcaaataaaacgaacgatcaaagttggacgcg 41
Query: 210 gatacttatggttgtacttataatgggacggag 242
|| ||| | || ||||||||| ||||||||||
Sbjct: 40 gaaactcacggctgtacttattttgggacggag 8
>RF01062;MIR812;AACV01024312.1/7356-7525 39947:Oryza sativa Japonica
Group
Length = 170
Score = 125 bits (63), Expect = 3e-28
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 47 gaaaaaaattaaaaacgtaagtcacgtgtaaagtactatttatgttttgtcatctcataa 106
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 107 caacaaaaatactaattat 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 44 ttttccgcgttcaactttgaccatccgtcttattt 78
||||||||| |||||||||| | ||||||||||||
Sbjct: 170 ttttccgcgctcaactttgatcgtccgtcttattt 136
>RF01062;MIR812;AAAA02035447.1/2861-2704 39946:Oryza sativa Indica
Group
Length = 158
Score = 125 bits (63), Expect = 3e-28
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 36 gaaaaaaattaaaaacaaaagtcacgagtaaattactattcatgttttatcatctcataa 95
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 96 caacaaaaatactaattat 114
>RF01062;MIR812;AACV01023092.1/7591-7760 39947:Oryza sativa Japonica
Group
Length = 170
Score = 125 bits (63), Expect = 3e-28
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||
Sbjct: 46 gaaaaaatttaaaaacataagtcacaagtaaagtattattcatgctttatcatctcataa 105
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacg 193
||||||||||| ||||||| ||||||||||||||||||
Sbjct: 106 caacaaaaatattaattataaattttttttaaataagacgaacg 149
>RF01062;MIR812;AAAA02007969.1/1558-1388 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 48 gaaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatcttataa 107
Query: 150 caacaaaaatactaatta 167
|||||||||| |||||||
Sbjct: 108 caacaaaaatgctaatta 125
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 40 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatcttataac 99
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 100 aataaaaatactaattat 117
>RF01062;MIR812;AAAA02017731.1/13732-13902 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtaccattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 109 aacaaaaatgctaattat 126
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattggg 205
|||||||||||||||||||| ||| |||||
Sbjct: 39 ttttaaataagacgaacggttaaagttggg 10
>RF01062;MIR812;AAAA02033303.1/7977-8146 39946:Oryza sativa Indica
Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 48 aaaaaatttaaaaacataagtcacaaataaaatactatttatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||||||| ||||
Sbjct: 108 aacaaaaatactatttat 125
>RF01062;MIR812;AP008211.1/21911813-21911642 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| | |||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 49 aaaaaaataaaaaacataagtcacgagtaaaatattatttatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
>RF01062;MIR812;AAAA02043709.1/2181-2021 39946:Oryza sativa Indica
Group
Length = 161
Score = 123 bits (62), Expect = 1e-27
Identities = 104/119 (87%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||
Sbjct: 37 aaaaaaattaaaaacataagtcacgagtaaagcactattcatgttttatcatcacataac 96
Query: 151 aac-aaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgc 208
||| ||||||||||||||| ||| |||||||||| ||| ||||||||||||||
Sbjct: 97 aacaaaaaatactaattataaaaaaatttcaaataagacggacgatcaaaattgggcgc 155
>RF01062;MIR812;AAAA02025306.1/1196-1026 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
Sbjct: 48 aaaaaatttaaaaacataagtcactagtgaagtactatttatgttttatcatctcatacc 107
Query: 151 aacaaaaatactaattat 168
||||||||||||| ||||
Sbjct: 108 aacaaaaatactatttat 125
>RF01062;MIR812;AP008218.1/20042680-20042512 39947:Oryza sativa
Japonica Group
Length = 169
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgagtaaagtactatttatattttatcatttcataac 106
Query: 151 aacaaaaatactaattat 168
|||||| |||||||||||
Sbjct: 107 aacaaatatactaattat 124
>RF01062;MIR812;AP002541.2/74846-75005 39947:Oryza sativa Japonica
Group
Length = 160
Score = 123 bits (62), Expect = 1e-27
Identities = 103/119 (86%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||| |||||| ||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 37 aaaaaatttaaagacataaatcacgagtaaagtgctattcatattttatcctctcataat 96
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||||||||||| |||||||||||||||||| |||||||||| ||||
Sbjct: 97 aacaaaaatactaattataaaaaacttttaaataagacgaacgatcaaaattggacgcg 155
>RF01062;MIR812;AP005284.3/81040-80870 39947:Oryza sativa Japonica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||
Sbjct: 48 aaaaaaattaaaaacataagtcacgagtaaattactgttcatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 108 aacaaaaatactaattat 125
>RF01062;MIR812;AACV01007528.1/40580-40750 39947:Oryza sativa
Japonica Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 138/168 (82%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
||||||||| ||||||| |||||||||||||||| | | |||||| ||||||
Sbjct: 1 ttttccgcgcccaactttaaccatccgtcttatttgaaaaaatttttaaaaaaattaaaa 60
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||
Sbjct: 61 acataagtcacaagtaaagtactattcatgttttatcatctcatagcaacaaaaatgcta 120
Query: 164 attatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgga 211
||||| |||||||||| ||| || |||||| |||| ||||||
Sbjct: 121 attataaaaaaattttaaataaaacggacagtcaaagttggacgcgga 168
>RF01062;MIR812;AAAA02004709.1/10898-10729 39946:Oryza sativa Indica
Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||
Sbjct: 48 aaaaaatttataaacataagtcgcgagtaaagtattattcatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 108 aacaaaaatactaattat 125
>RF01062;MIR812;AC174464.1/41456-41632 39947:Oryza sativa Japonica
Group
Length = 177
Score = 123 bits (62), Expect = 1e-27
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
||||||||| ||||||||||| |||||||||||| | | ||||||||||||||
Sbjct: 3 ttttccgcgcccaactttgaccgtccgtcttatttgaaaaatttttgaaaaaatttaaaa 62
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||||||||||||||| |||||||||| ||||||||||||||||||| |||||
Sbjct: 63 acataagtcacgagtaaaatactatttatattttatcatctcataacaataaaaa 117
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||||||| ||||||||| |||||||||||
Sbjct: 37 aaataagacggacggtcaaagttgggcgcgga 6
>RF01062;MIR812;AACV01017339.1/8113-8283 39947:Oryza sativa Japonica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 48 aaaaaagttaaaaacataagtcacgagtaaagtactattcatgctttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 108 aacaaaaatgctaattat 125
>RF01062;MIR812;AC133339.3/154381-154211 39947:Oryza sativa Japonica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaa-cataagtcacgagtaaagtactattcatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||| ||||||||||
Sbjct: 108 aacaaaagtactaattat 125
>RF01062;MIR812;AAAA02013629.1/5990-6158 39946:Oryza sativa Indica
Group
Length = 169
Score = 123 bits (62), Expect = 1e-27
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 48 aaaaaatttaaaaaca-aagtcacgagtaaagtattattcatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AC134230.2/135969-136140 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactatttatattttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|| |||||| ||||||||
Sbjct: 109 aataaaaatgctaattat 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaatt 202
|||||||||||||||| ||||||||||
Sbjct: 40 ttttaaataagacgaaaggtcaaaatt 14
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 50 aaaaaatttaaaaacataagtcacgcataaaatactattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AP008215.1/16622921-16622752 39947:Oryza sativa
Japonica Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| |
Sbjct: 47 aaaaaaattaaaaacataagtcacgagtaaagtattattcatgttttatcatctcatagc 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AP006528.2/106927-106756 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacataagtcacaagtaaagtattattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 109 aacaaaaatattaattat 126
>RF01062;MIR812;AP003871.3/137479-137311 39947:Oryza sativa Japonica
Group
Length = 169
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 46 aaaaaatttaaaaacataagtcatgagtaaagtactattcatgttttatgatctcataac 105
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 106 aacaaaaatattaattat 123
>RF01062;MIR812;AAAA02007218.1/82249-82418 39946:Oryza sativa Indica
Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 48 aaaaaatttaaaaacataagtcacgaataaagtattattcatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 108 aacaaaaatattaattat 125
>RF01062;MIR812;AC073392.3/147171-147000 4530:Oryza sativa (rice)
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 48 gaaaaaaattaaaaacataagtcacgaggaaagtactatttatgttttatcatcttgtaa 107
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||| |||||||| ||| |||||| ||||||| | ||| |||||||||
Sbjct: 108 caacaaaaatgctaattataaaaaaatttcaaataaaacgaacgattaaagttgggcgcg 167
Query: 210 ga 211
||
Sbjct: 168 ga 169
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 121 bits (61), Expect = 5e-27
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 41 aaaaaatttaaaaacataagtcacgaataaagtactattcatgttttatcatctcataac 100
Query: 151 aacaaaaatactaatta 167
|| ||||||| ||||||
Sbjct: 101 aataaaaatattaatta 117
>RF01062;MIR812;AAAA02003808.1/33045-32875 39946:Oryza sativa Indica
Group
Length = 171
Score = 121 bits (61), Expect = 5e-27
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 48 gaaaaaaattaaaaacataagtcacgagtaaagtactattcatatttcatcatctcataa 107
Query: 150 caacaaaaatactaatt 166
|||||||||||||||||
Sbjct: 108 caacaaaaatactaatt 124
>RF01062;MIR812;AP008212.1/5981335-5981494 39947:Oryza sativa
Japonica Group
Length = 160
Score = 121 bits (61), Expect = 5e-27
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||| |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 38 aaaagatttaaaagcataagtcacgagtaaagtactattcatgttttatcatcttataac 97
Query: 151 aacaaaaatactaatta 167
|||||||||||||||||
Sbjct: 98 aacaaaaatactaatta 114
>RF01062;MIR812;AACV01012761.1/14916-15085 39947:Oryza sativa
Japonica Group
Length = 170
Score = 121 bits (61), Expect = 5e-27
Identities = 99/114 (86%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaagcataagtcacgagtaaagtagtattcatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
||| |||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 107 aacgaaaatactaattataaaaaaatttcaaataagacgaacgatcaaagttgg 160
>RF01062;MIR812;AACV01005899.1/988-1157 39947:Oryza sativa Japonica
Group
Length = 170
Score = 121 bits (61), Expect = 5e-27
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 46 gaaaaaaattaaaaatataagtcacaagtaaagtattatttatgttttatcatctcatag 105
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
||| ||||||||||||||| |||||||||||||| ||| | |||||| ||||||
Sbjct: 106 caataaaaatactaattataaacaaattttaaataagacggacgattaaaattaggcgcg 165
Query: 210 ga 211
||
Sbjct: 166 ga 167
>RF01062;MIR812;AACV01008873.1/15378-15551 39947:Oryza sativa
Japonica Group
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||| |||| || ||||||||||| |||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgagtaaagtagtattcatattttatcatcttataac 109
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgc 208
||||||| |||||||||| |||||||||||||| ||| ||||| ||||||||
Sbjct: 110 aacaaaattactaattataaaaaaattttaaataagacggacgatcaaagttgggcgc 167
>RF01062;MIR812;AY946429.1/28-188 4530:Oryza sativa (rice)
Length = 161
Score = 121 bits (61), Expect = 5e-27
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 46 taaaaacataagtcacgagtaaagtactatttatgttttatcatcttataacaacaaaat 105
Query: 159 tactaattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
| |||||||| |||||||||||||||| ||||||||||
Sbjct: 106 tgctaattataaaaaaaaattaaataagacgaacgatcaaaattgg 151
>RF01062;MIR812;AY946444.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 121 bits (61), Expect = 5e-27
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 47 gaaaaaaattaaaaacataagtcacgagtaaagtactattcatattttatcatcttataa 106
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
||||||||| |||||||| ||| |||||||||||||| ||||| |||| ||||
Sbjct: 107 taacaaaaatgctaattataaaaaaatttcaaataagacgaacgatcaaagttggacgcg 166
Query: 210 ga 211
||
Sbjct: 167 ga 168
>RF01062;MIR812;ABRL01000278.1/1338-1168 65489:Oryza barthii
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct: 48 aaaaaatttaaaaatataagtcacaagtaaagtattatttatgttttatcatctcatagc 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| ||||||||||||||| |||||||||||| | ||| | |||||| |||||||
Sbjct: 108 aataaaaatactaattataaaaaaattttaaataagatggacgattaaaattaggcgcgg 167
Query: 211 a 211
|
Sbjct: 168 a 168
>RF01062;MIR812;ABRL01002014.1/3171-3001 65489:Oryza barthii
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 101 aaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaata 160
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aaaaaataagtcccgagtaaagtactatttatgttttatcatctcataacaacaaaaata 116
Query: 161 ctaattat 168
||||||||
Sbjct: 117 ctaattat 124
>RF01062;MIR812;AP008208.1/22478382-22478209 39947:Oryza sativa
Japonica Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||
Sbjct: 51 aaaaaaattaaaaacataagtcacgagtaaaatactatttatattttattatctcataac 110
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
||||||||| |||||||| |||||||||||||| ||| |||||
Sbjct: 111 aacaaaaatgctaattataaaaaaattttaaataagacggacgatcaaa 159
>RF01062;MIR812;AC118347.2/114612-114782 39947:Oryza sativa Japonica
Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 56 aactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaacataagtcacg 115
|||||||||| |||||||||||| | | |||| || ||||||||||||||||||
Sbjct: 13 aactttgaccgtccgtcttatttgaaatttttttgaaagaaattaaaaacataagtcacg 72
Query: 116 agtaaagtactatttatgttttatcatctcataacaacaaaaatactaattat 168
||||||||| |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 73 agtaaagtattattaatgttttatcatctcataacaaccaaaatactaattat 125
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 51 aaaaaaatcaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataac 110
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
|| |||||| |||||||| ||| |||||||||||||| |||||
Sbjct: 111 aataaaaatgctaattataaaaaaatttcaaataagacgaacgatcaaa 159
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 49 aaaaaaattaaaaacataagtcacgtataaagtactattcatgttttatcatctcatgac 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| ||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 109 aataaaaatactaattataaaacaattttaaataagacggacgatcaaaattagacgcgg 168
Query: 211 a 211
|
Sbjct: 169 a 169
>RF01062;MIR812;CR855047.1/68417-68246 4530:Oryza sativa (rice)
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 56 aactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaacataagtcacg 115
|||||||||||| |||||||||| | | ||||||||||||||||||||||||||
Sbjct: 14 aactttgaccattcgtcttattttaaaattttttgaaaaaatttaaaaacataagtcacg 73
Query: 116 agtaaagtactatttatgttttatcatctcataacaacaaaaatactaattat 168
||||||||| |||| |||||||||||||| |||| ||||||||| ||||||||
Sbjct: 74 agtaaagtattattcatgttttatcatcttataataacaaaaatgctaattat 126
>RF01062;MIR812;AACV01010650.1/39037-39206 39947:Oryza sativa
Japonica Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 107/125 (85%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
||||||| || ||||||| ||||| ||| |||||||| | ||||||| ||||||
Sbjct: 1 ttttccgtgtccaactttaaccattcgttttatttaaaattcttttgaaaaaaattaaaa 60
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 61 aaataagtcatgagtaaagtactattcatattttatcatctcataacaacaaaaatacta 120
Query: 164 attat 168
|||||
Sbjct: 121 attat 125
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaa 80
||||||||| |||||||||| | ||||||||||||||
Sbjct: 170 ttttccgcgctcaactttgatcgtccgtcttatttaa 134
>RF01062;MIR812;AP005739.3/54194-54021 39947:Oryza sativa Japonica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 48 gaaaaaatttaaaaacataagtcacgagtaaagtaatatttatgttttattatctcataa 107
Query: 150 caa-caaaaatactaattat 168
||| |||||||||||||||
Sbjct: 108 caataaaaaatactaattat 127
>RF01062;MIR812;AAAA02011153.1/42310-42482 39946:Oryza sativa Indica
Group
Length = 173
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 48 gaaaaaattttaaaacataagtcacgagtaaaatactattcatgttttatcatctcgtaa 107
Query: 150 caacaaaaatactaattat 168
||| |||||||||||||||
Sbjct: 108 caagaaaaatactaattat 126
>RF01062;MIR812;AACV01017406.1/31277-31108 39947:Oryza sativa
Japonica Group
Length = 170
Score = 117 bits (59), Expect = 8e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 94 aaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaac 153
||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 51 aaatttaaaaacataagtcacttgtaaagtactattcatgttttatcatctcataacaac 110
Query: 154 aaaaatactaattat 168
||||||| |||||||
Sbjct: 111 aaaaatattaattat 125
>RF01062;MIR812;AP008207.1/14327956-14328125 39947:Oryza sativa
Japonica Group
Length = 170
Score = 117 bits (59), Expect = 8e-26
Identities = 101/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
|||||||| ||||||||||||| | |||||||||| | | ||||||||| ||||
Sbjct: 1 ttttccgcattcaactttgaccgttcgtcttatttgaaaactttttgaaaaaatt-aaaa 59
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaat 159
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 60 atataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaat 115
>RF01062;MIR812;AACV01018952.1/4339-4509 39947:Oryza sativa Japonica
Group
Length = 171
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||
Sbjct: 47 gaaaaaatttaaaaacataagtcacgggtaaagtactattcatattttatcatttcataa 106
Query: 150 caacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aaacaaaaatactaattat 125
>RF01062;MIR812;AP008209.1/5420310-5420125 39947:Oryza sativa
Japonica Group
Length = 186
Score = 117 bits (59), Expect = 8e-26
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 106 ataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 77 ataagtcacgagtaaagtactatttatgttttatcatctcataacaataaaaatactaat 136
Query: 166 tat 168
|||
Sbjct: 137 tat 139
>RF01062;MIR812;AACV01014495.1/45963-46136 39947:Oryza sativa
Japonica Group
Length = 174
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 48 gaaaaaaattaaaaacataagtcacgagtaaagtactattcatgctttatcatctcatag 107
Query: 150 caacaaaaatactaattat 168
|||||||||| ||||||||
Sbjct: 108 caacaaaaatgctaattat 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||||| ||||||||||| |||||||||||
Sbjct: 36 aaataagatgaacggtcaaagttgggcgcgga 5
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 159 gaaaaaaatttaaaacataagtcacgcgtaaagtactattcatgttttatcatctcataa 100
Query: 150 caacaaaaatactaattat 168
||| |||||||||||||||
Sbjct: 99 caataaaaatactaattat 81
>RF01062;MIR812;ABRL01002073.1/6466-6304 65489:Oryza barthii
Length = 163
Score = 115 bits (58), Expect = 3e-25
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 40 aaaaaatttaaaaacgtaagtcacgagtaaagtactattcatattttatcatcttataac 99
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacg 193
|| ||||||| ||||||| ||||||||||||||||||
Sbjct: 100 aataaaaatattaattataaaataattttaaataagacgaacg 142
>RF01062;MIR812;AAAA02030087.1/8995-9151 39946:Oryza sativa Indica
Group
Length = 157
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 36 aaaaaattttaaaacataagtcacgcataaagtattattcatgttttatcatctcataac 95
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 96 aacaaaaatactaattat 113
>RF01062;MIR812;AAAA02014490.1/13888-14054 39946:Oryza sativa Indica
Group
Length = 167
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgaacaaagtactatttatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
|| ||||||| |||||||
Sbjct: 107 aataaaaatattaattat 124
>RF01062;MIR812;AP008218.1/3278516-3278347 39947:Oryza sativa
Japonica Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 48 aaaaaatttcaaaccataagtcacgagaaaagtactatttatg-tttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AP003314.3/74968-74797 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgagtaaagtaatattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
|| ||||||| |||||||
Sbjct: 110 aataaaaatattaattat 127
>RF01062;MIR812;AAAA02033258.1/7726-7553 39946:Oryza sativa Indica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaaaaaattaaaaacagaagttgcgagtaaagtactatttatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 108 aacaaaaatgctaattat 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggc 206
||||||||| |||||||||||||||||
Sbjct: 35 aaataagacaaacggtcaaaattgggc 9
>RF01062;MIR812;AP008207.1/21491769-21491941 39947:Oryza sativa
Japonica Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 50 aaaaaatttaaaaacataagtcacacataaagtgctattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AP008207.1/26364722-26364890 39947:Oryza sativa
Japonica Group
Length = 169
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 46 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatcttataac 105
Query: 151 aacaaaaatactaattat 168
|| ||||||| |||||||
Sbjct: 106 aataaaaatattaattat 123
>RF01062;MIR812;AACV01023650.1/6583-6755 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacataagtcacaagtaaagtattattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||| ||||||||||||||
Sbjct: 109 aac-aaaatactaattat 125
>RF01062;MIR812;AY946410.1/199-31 4530:Oryza sativa (rice)
Length = 169
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 46 aaaaaaattaaaaacataagtcacgagcaaagtactattcacgttttatcatctcataac 105
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 106 aataaaaatactaattat 123
>RF01062;MIR812;AP003203.3/101179-101008 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||| ||||||||||||||||||||||||| | || ||||||||||||||||||||
Sbjct: 49 aaaaaattgaaaaacataagtcacgagtaaagtattgttcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 109 aacaaaaataataattat 126
>RF01062;MIR812;AACV01013049.1/7941-7785 39947:Oryza sativa Japonica
Group
Length = 157
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 36 aaaaaatttaaaatcataagtcacgagtaaagtactattcatgttttatcatctcataat 95
Query: 151 aacaaaaatactaattat 168
|| ||||||| |||||||
Sbjct: 96 aataaaaatattaattat 113
>RF01062;MIR812;AL928751.2/51474-51645 4530:Oryza sativa (rice)
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaaacatgagtcacgaataaagtaatattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 109 aacaaaaatgctaattat 126
>RF01062;MIR812;AL845342.2/104516-104684 4530:Oryza sativa (rice)
Length = 169
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacataagacacacataaagtactatttatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AAAA02011089.1/84707-84876 39946:Oryza sativa Indica
Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct: 47 aaaaaaattaaaaacataagtcacgagtaaaatactattcatgttttatcatctcatagc 106
Query: 151 aacaaaaatactaattat 168
||||||||||| ||||||
Sbjct: 107 aacaaaaatacaaattat 124
>RF01062;MIR812;AC132483.2/71128-71287 39947:Oryza sativa Japonica
Group
Length = 160
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 45 taaaaacataagtcatgagtaaaatactattcatgttttatcatctcataacaacaaaaa 104
Query: 159 tactaattat 168
||||||||||
Sbjct: 105 tactaattat 114
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 56 taaaaacataagtcacaagtaaagtactattcatattttatcatctcataacaacaaaaa 115
Query: 159 tactaattat 168
||||||||||
Sbjct: 116 tactaattat 125
>RF01062;MIR812;AC135792.3/134516-134682 39947:Oryza sativa Japonica
Group
Length = 167
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 taaaaacataagttaagagtaaagtactatttatgttttatcatctcataacaacaaaaa 113
Query: 159 tactaattat 168
|| |||||||
Sbjct: 114 tagtaattat 123
>RF01062;MIR812;AP008208.1/7741344-7741185 39947:Oryza sativa
Japonica Group
Length = 160
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||| || ||||||| |||| || |||||||||||||||||
Sbjct: 37 aaaaaatttaaaaacataagtcatgaataaagtattattcatattttatcatctcataac 96
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 97 aacaaaaatactaattat 114
>RF01062;MIR812;AP008208.1/2764819-2764990 39947:Oryza sativa
Japonica Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactatccatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|| ||||||| |||||||
Sbjct: 109 aataaaaatattaattat 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcg 207
|||||||||| |||||||||||||||||
Sbjct: 35 aaataagacggacggtcaaaattgggcg 8
>RF01062;MIR812;AP004161.3/106159-105991 39947:Oryza sativa Japonica
Group
Length = 169
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgagtaaagtattattcatattttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
|||||| |||||||||||
Sbjct: 107 aacaaatatactaattat 124
>RF01062;MIR812;AL606626.3/62894-63049 39947:Oryza sativa Japonica
Group
Length = 156
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||| || |||||||||||| || |||||||||||||||||
Sbjct: 33 aaaaaatttaaaaacataagtcgcgcataaagtactattcatattttatcatctcataac 92
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 93 aacaaaaatactaattat 110
>RF01062;MIR812;AAAA02011645.1/12642-12812 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 56 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcatagcaataaaaa 115
Query: 159 tactaattat 168
| ||||||||
Sbjct: 116 tgctaattat 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||||||||| || ||||||||
Sbjct: 36 aaataagacgaacggtcaaagttcggcgcgga 5
>RF01062;MIR812;AP008210.1/28196407-28196576 39947:Oryza sativa
Japonica Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 46 aaaaaaattcaaaacataagtcacgattaaagtactattcatgttttatcatctcataac 105
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 106 aacaaaaatgctaattat 123
>RF01062;MIR812;AAAA02004773.1/6937-7109 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||| || || ||||||||||||| ||||||||||||||||||||
Sbjct: 50 aaaaaatttaaaaacataaatctcgggtaaagtactattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 110 aacaaaaatattaattat 127
>RF01062;MIR812;AP008212.1/10980126-10979955 39947:Oryza sativa
Japonica Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtgctattcatgttttataatctcataac 108
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 109 aacaaaaatagtaattat 126
>RF01062;MIR812;AACV01006395.1/789-618 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
||||| |||||||||||| ||||| |||| |||||||||||||||||||||||||||||
Sbjct: 49 aaaaaattaaaaacataaaacacgaataaaatactatttatgttttatcatctcataaca 108
Query: 152 acaaaaatactaattat 168
|||||||||||||||||
Sbjct: 109 acaaaaatactaattat 125
>RF01062;MIR812;AACV01010271.1/7593-7765 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||
Sbjct: 50 aaaaaatttaaaaacataagtcacaagtaaagtcttattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
|| |||||| |||||||| |||||||||||||| ||| ||||| ||||
Sbjct: 110 aataaaaatgctaattataaaaaaattttaaataagacggacgatcaaatttgg 163
>RF01062;MIR812;AP003374.3/116876-116710 39947:Oryza sativa Japonica
Group
Length = 167
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 100 aaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaat 159
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 53 aaaaacataagtcaagagtaaagtactattcatgttttatcatctcataacaacaaaaat 112
Query: 160 actaattat 168
||||||||
Sbjct: 113 gctaattat 121
>RF01062;MIR812;AAAA02019804.1/47754-47923 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 137/167 (82%), Gaps = 1/167 (0%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
|||||||||| ||||||| ||| |||||||||||||| | |||||||| |||
Sbjct: 1 ttttccgcgtccaactttaaccgtccgtcttatttaaaaattttttataaaaattttaaa 60
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
| |||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 61 a-ataagtcacgagtaaaatactattcatattttatcatctcataacaacaaaaatacta 119
Query: 164 attatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
||||| ||| |||||||||| ||| | ||| ||||||||||
Sbjct: 120 attataaaaaaatttaaaataagacggacgattaaagttgggcgcgg 166
>RF01062;MIR812;AP006186.3/94692-94521 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 55 caactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaacataagtcac 114
||||||||||| |||| ||||||||| | |||| ||||||||||||||||||||
Sbjct: 13 caactttgaccgtccggcttatttaaaaattttctgaaagaatttaaaaacataagtcac 72
Query: 115 gagtaaagtactatttatgttttatcatctcataacaacaaaaatactaattat 168
| |||||||||||| || ||||||||||||||||||| |||||||||||||||
Sbjct: 73 gtataaagtactattcatattttatcatctcataacaataaaaatactaattat 126
>RF01062;MIR812;AP004764.2/33491-33662 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
||||| ||||||||||||| || || |||||||||||| |||||||||||||||||||||
Sbjct: 49 aaaaaattaaaaacataagccatgaataaagtactattcatgttttatcatctcataaca 108
Query: 152 acaaaaatactaattat 168
|||||||||||||||||
Sbjct: 109 acaaaaatactaattat 125
>RF01062;MIR812;AAAA02032579.1/242-413 39946:Oryza sativa Indica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 59 tttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaaacataagtcacgagt 118
||||||| |||||||||||||| | ||||||| |||||||||||||| | ||||
Sbjct: 16 tttgaccttccgtcttatttaaaaattttttgaaaaaagttaaaaacataagttatgagt 75
Query: 119 aaagtactatttatgttttatcatctcataacaacaaaaatactaattat 168
||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 76 aaagtactattcatattttatcatcttataacaacaaaaatactaattat 125
>RF01062;MIR812;AACV01002621.1/2200-2365 39947:Oryza sativa Japonica
Group
Length = 166
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 46 aaaaaatttaaaaacataagtcacgtataaagtactattcatgttttatcatctcataat 105
Query: 151 aacaaaaatactaatta 167
|||||||||| ||||||
Sbjct: 106 aacaaaaatattaatta 122
>RF01062;MIR812;AAAA02017193.1/13592-13421 39946:Oryza sativa Indica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 104/122 (85%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||| || |||||||||||||||| | || |||||||||||||| ||||
Sbjct: 48 gaaaaaaattaaaaaaattagtcacgagtaaagtaattttcatgttttatcatcttataa 107
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
||||||||||||||||||| ||| |||||||||| ||| ||||| |||||||||
Sbjct: 108 caacaaaaatactaattataaaaaaatttcaaataagacggacgatcaaagttgggcgcg 167
Query: 210 ga 211
||
Sbjct: 168 ga 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcg 209
|||||||||||| | |||||||||||||||
Sbjct: 36 aaataagacgaatgatcaaaattgggcgcg 7
>RF01062;MIR812;AP008218.1/26666947-26666770 39947:Oryza sativa
Japonica Group
Length = 178
Score = 111 bits (56), Expect = 5e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 aaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaata 160
|||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 65 aaaacataagtcacaagtaaagtactatttatattttatcatctcataacaataaaaata 124
Query: 161 ctaattat 168
||||||||
Sbjct: 125 ctaattat 132
>RF01062;MIR812;AP008207.1/38281433-38281603 39947:Oryza sativa
Japonica Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 103/121 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||| | ||||||||||||||||||| |||||||| |||||||
Sbjct: 48 aaaaaaattaaaaacataagttaggagtaaagtactatttatgctttatcatttcataac 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| ||||||||||||||| ||| ||||||| |||| | | ||||||||||||||
Sbjct: 108 aataaaaatactaattataaaaaaatttcaaataagtcgaatgattaaaattgggcgcgg 167
Query: 211 a 211
|
Sbjct: 168 a 168
>RF01062;MIR812;AAAA02020785.1/3441-3270 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttattt-aagannnnnnngaaaaaatttaaa 102
|||||||||||||||||||||| |||||||||||| || ||||||| |||||
Sbjct: 1 ttttccgcgttcaactttgaccgtccgtcttatttgaatttttttttgaaaaaaattaaa 60
Query: 103 aacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatact 162
||||||||| ||||||||| || |||| |||||||||||||| |||| ||||||||||||
Sbjct: 61 aacataagttacgagtaaaatattattcatgttttatcatcttataataacaaaaatact 120
Query: 163 aatta 167
|||||
Sbjct: 121 aatta 125
>RF01062;MIR812;AP008217.1/3552412-3552244 39947:Oryza sativa
Japonica Group
Length = 169
Score = 111 bits (56), Expect = 5e-24
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||| ||| ||||||||| || ||||||| |||||||||||||||||
Sbjct: 46 aaaaaatttaaaaacatgagttacgagtaaattattatttatattttatcatctcataac 105
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattg 203
|| ||||||||||||||| ||| |||||||||| ||||| |||||||
Sbjct: 106 aaaaaaaatactaattataaaaaaatttcaaataagacggacggtaaaaattg 158
>RF01062;MIR812;AP008208.1/18863983-18864152 39947:Oryza sativa
Japonica Group
Length = 170
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
|||||||||| ||||||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 1 ttttccgcgtccaactttgaccgtccgttttatttaaaaattttttaaaaaaatt-aaaa 59
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 60 tcataaatcacgagtaatgtactattcatgttttatcatctcataacaataaaaatacta 119
Query: 164 attat 168
|||||
Sbjct: 120 attat 124
>RF01062;MIR812;AP003835.4/38107-38280 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 5e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 aaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaata 160
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 60 aaaacataagtcacgagtagagtactattcatgttttatcatctcataacaacaaaaata 119
Query: 161 ctaattat 168
|||||||
Sbjct: 120 ttaattat 127
>RF01062;MIR812;AP005685.3/37016-36858 39947:Oryza sativa Japonica
Group
Length = 159
Score = 111 bits (56), Expect = 5e-24
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaa-aacataagtcacgagtaaagtactatttatgttttatcatctcata 148
||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 36 gaaaaaattaaaagaacataagtcatgagtaaagtactattcatgttttatcatctcata 95
Query: 149 acaacaaaaatactaa 164
||||||||||||||||
Sbjct: 96 acaacaaaaatactaa 111
>RF01062;MIR812;AACV01002667.1/14693-14523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaaatttaaaa-cataagttatgagtaaagtactattcatgttttatcatctcataac 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
||| |||||||||||||| |||||||||||| | ||| ||||| |||||| |||
Sbjct: 108 aacgaaaatactaattataaaaaaattttaaataagatggacgatcaaagttgggcacgg 167
Query: 211 a 211
|
Sbjct: 168 a 168
>RF01062;MIR812;AP003813.4/82612-82446 39947:Oryza sativa Japonica
Group
Length = 167
Score = 111 bits (56), Expect = 5e-24
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 95 aatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaac- 153
||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||
Sbjct: 47 aatttaaaaacataagtcacgggtaaagtactattcatattttatcatctcataacaaca 106
Query: 154 aaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaatt 202
||||||||||||||| ||| |||||||||| ||||| ||||||
Sbjct: 107 aaaaatactaattataaaaaattttcaaataagacggacggttaaaatt 155
>RF01062;MIR812;AC068950.11/124784-124613 39947:Oryza sativa
Japonica Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||||||||||||| |||||| ||||||| |||||||||||||| ||| || ||||||
Sbjct: 57 taaaaacataagtcataagtaaaatactattcatgttttatcatcttatatcagcaaaaa 116
Query: 159 tactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||||| |||||||||||||||||||||||| |||| ||||||
Sbjct: 117 tactaattataaaaaaattttaaataagacgaacggtcaaagttggacgcgga 169
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 45 tttccgcgttcaactttgaccatccgtcttatttaa 80
||||||||| ||||||||||| | ||||||||||||
Sbjct: 171 tttccgcgtccaactttgaccgttcgtcttatttaa 136
>RF01062;MIR812;AL442103.2/69331-69155 4530:Oryza sativa (rice)
Length = 177
Score = 111 bits (56), Expect = 5e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgagtaaagtactattcatattttatcatctcataac 109
Query: 151 aacaaaaa 158
||||||||
Sbjct: 110 aacaaaaa 117
>RF01062;MIR812;AAAA02007970.1/6373-6202 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 103/121 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactatttatgttttatcatctaatatt 108
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| |||||| |||||||| |||| ||||||||||| | ||||| |||| |||||
Sbjct: 109 aataaaaatgctaattataaaaaatttttgaataagacgaatgatcaaagttggacgcgg 168
Query: 211 a 211
|
Sbjct: 169 a 169
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 111 bits (56), Expect = 5e-24
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
|||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 158 aaaaatttaaaagcataagttacgcataaagtactattcatgttttatcatctcataaca 99
Query: 152 acaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgga 211
| ||||||||||||||| || |||||||||| | | ||||| |||||| || |
Sbjct: 98 agaaaaatactaattataaaaaaagttcaaataagacggatgatcaaagttgggcacgaa 39
Query: 212 tacttatggttgtacttataatgggacggagagagta 248
|||||| |||| ||||| ||||||| |||| |||||
Sbjct: 38 aacttatagttgcacttaaaatgggatggagggagta 2
>RF01062;MIR812;AC129226.2/34668-34840 39947:Oryza sativa Japonica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||| ||||||||||||||||||||| ||||||| || |||||| ||||| |||
Sbjct: 47 gaaaaaattttaaaacataagtcacgagtaaaatactattcatattttattatctcgtaa 106
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 107 caacaaaaatactaattat 125
>RF01062;MIR812;AACV01025420.1/209-362 39947:Oryza sativa Japonica
Group
Length = 154
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||
Sbjct: 30 gaaaaaattttaaaacataagtcacgagtaaaaaactgttcatgttttatcatctcataa 89
Query: 150 caacaaaaatactaattat 168
||| |||||||||||||||
Sbjct: 90 caataaaaatactaattat 108
>RF01062;MIR812;AAAA02004415.1/5069-4899 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||| | |||||||||||||||||| |||||||| ||||||
Sbjct: 46 gaaaaaaattaaaaacataagttaggagtaaagtactatttatactttatcatttcataa 105
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 106 caacaaaaatactaattat 124
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||| ||| ||||| |||||||||||||
Sbjct: 39 ttttaaataaaacggacggttaaaattgggcgcg 6
>RF01062;MIR812;AP008216.1/11453914-11453749 39947:Oryza sativa
Japonica Group
Length = 166
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| | ||||| |||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 47 gaaaaaaatgaaaaatataagtcacgagtaaaatacgatttatgttttattatctcataa 106
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 107 caacaaaaatactaattat 125
>RF01062;MIR812;AAAA02020504.1/6865-7035 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||| |||| |||||||||| |||||| || |||| |||||||||||||||||||
Sbjct: 47 gaaaaaattaaaaaccataagtcacaagtaaaatattattcatgttttatcatctcataa 106
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 107 caacaaaaatactaattat 125
>RF01062;MIR812;AACV01001141.1/8371-8200 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||| ||||||||||||| ||||||||||||||| || ||||||||| ||||||
Sbjct: 48 gaaaaaattttaaaacataagtcatgagtaaagtactattcatattttatcatttcataa 107
Query: 150 caacaaaaatactaattat 168
|||||||||| ||||||||
Sbjct: 108 caacaaaaatgctaattat 126
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||||| ||||||| ||| |||||||||
Sbjct: 40 ttttaaataagatgaacggttaaagttgggcgcg 7
>RF01062;MIR812;AP008211.1/18288618-18288777 39947:Oryza sativa
Japonica Group
Length = 160
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||||||||||||| ||||||| || |||||||||||||||||||||
Sbjct: 36 gaaaaaaaataaaaacataagtcacgcataaagtaatacttatgttttatcatctcataa 95
Query: 150 caacaaaaatactaattat 168
|||||||||||||||||||
Sbjct: 96 caacaaaaatactaattat 114
>RF01062;MIR812;AAAA02014312.1/14008-14177 39946:Oryza sativa Indica
Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||| ||||
Sbjct: 47 gaaaaaaattaaaaacataagtcacgcgtaaagtacgattcatgttttatcatcttataa 106
Query: 150 caacaaaaatactaattat 168
||| |||||||||||||||
Sbjct: 107 caataaaaatactaattat 125
>RF01062;MIR812;AY946491.1/27-199 4530:Oryza sativa (rice)
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||| |||||
Sbjct: 49 gaaaaaaattaaaaacataagtcacgagtagagtactattcatgttttattatcccataa 108
Query: 150 caacaaaaatactaattat 168
|||||||||| ||||||||
Sbjct: 109 caacaaaaatgctaattat 127
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgc 208
|||||||||||||||||||| ||||||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcgc 8
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||| ||||||||||||| ||||||||||||||| || ||||||||| ||||||
Sbjct: 159 gaaaaaattttaaaacataagtcatgagtaaagtactattcatattttatcatttcataa 100
Query: 150 caacaaaaatactaattat 168
|||||||||| ||||||||
Sbjct: 99 caacaaaaatgctaattat 81
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 109 bits (55), Expect = 2e-23
Identities = 126/152 (82%)
Strand = Plus / Minus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||| ||||||||||||| | | ||||||||||||||||||
Sbjct: 159 aaaaaacttaaaaacataagtcaggagtaaagtactactcacgttttatcatctcataac 100
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
||||||||| |||||||| || |||||||||||| | ||||| ||| || |||
Sbjct: 99 aacaaaaatgctaattataaaaaaaattaaaataagacgaatgatcaaagttgagcacgg 40
Query: 211 atacttatggttgtacttataatgggacggag 242
| ||| |||| || |||||| ||||||||||
Sbjct: 39 aaactcatggctgcacttattttgggacggag 8
>RF01062;MIR812;AP002908.2/109269-109442 39947:Oryza sativa Japonica
Group
Length = 174
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||| ||||||||||||||| |||||||||||||| | |||
Sbjct: 51 aaaaaagttaaaaacataagtcaagagtaaagtactattcatgttttatcatctgacaac 110
Query: 151 aacaaaaatactaattat 168
|||||| |||||||||||
Sbjct: 111 aacaaagatactaattat 128
>RF01062;MIR812;AC105743.8/84786-84958 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgtttt-atcatctcataac 150
||||||||||||||||||||||| ||||||||| | || ||||||| |||||||||||||
Sbjct: 49 aaaaatttaaaaacataagtcacaagtaaagtattgttcatgtttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||| ||| |||||||||||| ||||
Sbjct: 40 ttttaaataagacggacgatcaaaattgggcccgga 5
>RF01062;MIR812;ABRL01001087.1/1141-968 65489:Oryza barthii
Length = 174
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||| |||| ||||| |||| ||||||||||||||||||||||||||||
Sbjct: 51 aaaaaaattaaaaatataaaacacgaataaaatactatttatgttttatcatctcataac 110
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 111 aacaaaaatactaattat 128
>RF01062;MIR812;AAAA02008720.1/621-453 39946:Oryza sativa Indica
Group
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||| |||| |||||| |||||||||||| |||| |||||||||||||||||| |
Sbjct: 47 aaaaaatttgaaaatataagttacgagtaaagtattattcatgttttatcatctcatagc 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AP008209.1/13645053-13644882 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaaattttaaaaacataaatcacaagtaaagtactatacatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 109 aataaaaatactaattat 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggc 206
|||||||||||||| ||| ||||||||||||
Sbjct: 39 ttttaaataagacggacgatcaaaattgggc 9
>RF01062;MIR812;AL731585.5/116334-116173 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 95 aatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaaca 154
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 43 aatttaaaaacataagtcacgagtaaagtactattcatattttatcatctcataacaatc 102
Query: 155 aaaatactaattat 168
|||||| |||||||
Sbjct: 103 aaaatattaattat 116
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 57 taaaaacataagtcacgagtaaagtactattcatgttttatcatctcataacaataaaaa 116
Query: 159 ta 160
||
Sbjct: 117 ta 118
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 45 tttccgcgttcaactttgaccatccgtcttatttaa 80
||||||| ||||||||||| | ||||||||||||||
Sbjct: 170 tttccgcattcaactttgatcgtccgtcttatttaa 135
>RF01062;MIR812;AACV01011713.1/13667-13835 39947:Oryza sativa
Japonica Group
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||| |||||||||| |||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 54 taaaagcataagtcactagtaaattactatttatgttttatcatcttataacaacaaaaa 113
Query: 159 tactaattat 168
||||||||||
Sbjct: 114 tactaattat 123
>RF01062;MIR812;AP004689.3/27890-27719 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgcataaagtactattcatgttttatcatctcataat 109
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 110 aataaaaatactaattat 127
>RF01062;MIR812;AACV01008221.1/3287-3126 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||| |||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 39 aaaaaaattaaaaatataagtcacgagtaaagtactattcatattttatcatcttataat 98
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 99 aacaaaaatactaattat 116
>RF01062;MIR812;AAAA02011639.1/2411-2241 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||| ||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 50 aaaaagttttaaaacataagtcacgagtaaattac-attcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
>RF01062;MIR812;AAAA02009487.1/5039-4872 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||| |||||||||||| |||| |||||||||||| | |||||
Sbjct: 47 aaaaaaattaaaaacataagttacgagtaaagtattattcatgttttatcattttataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AAAA02008855.1/40375-40547 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||
Sbjct: 50 aaaaattttaaaaacataaatcacgaataaagtactatacatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 110 aataaaaatactaattat 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggc 206
|||||||||||||| ||| ||||||||||||
Sbjct: 40 ttttaaataagacggacgatcaaaattgggc 10
>RF01062;MIR812;AP008218.1/23450915-23451074 39947:Oryza sativa
Japonica Group
Length = 160
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||| |||||||||||||||||| || ||||||||||||||||||| |||||
Sbjct: 39 aaaaaatttaagtacataagtcacgagtaaaatattatttatgttttatcatcttataac 98
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 99 aataaaaatactaattat 116
>RF01062;MIR812;AAAA02001058.1/3820-3989 39946:Oryza sativa Indica
Group
Length = 170
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||| |||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 49 aaaaaaattaaaaacattagtcacgagtaagatactattcatgttttatcatcttataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
>RF01062;MIR812;AP008211.1/22838411-22838250 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||| || ||||||||||||||||||||||||||| |||| |||||
Sbjct: 38 aaaaaaattaaaaacatatgttacgagtaaagtactatttatgttttattatcttataac 97
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 98 aacaaaaatgctaattat 115
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||||||||||||| || ||||||||
Sbjct: 40 ttttaaataagacgaacggtcaaagttaggcgcgga 5
>RF01062;MIR812;AC133008.3/46362-46533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |
Sbjct: 50 aaaaaatttaaaaacataagtcacatataaagtactattcatgttttatcatctcatagc 109
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 110 aataaaaatactaattat 127
>RF01062;MIR812;AL606691.4/106941-106782 39947:Oryza sativa Japonica
Group
Length = 160
Score = 107 bits (54), Expect = 8e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||
Sbjct: 40 aaaaaatttaaaa-cataaatcacgagtaaaatactatttatattttatcatctcataat 98
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 99 aacaaaaatactaattat 116
>RF01062;MIR812;AP001366.1/19470-19642 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||
Sbjct: 50 aaaaaatttaaaaacataagtcacgcataaagtactactcatgttttatcatctcataat 109
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 110 aacaaaaatattaattat 127
>RF01062;MIR812;AP006525.2/46687-46848 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||
Sbjct: 47 aaaaaataaaaaaacataagtcacgcataaagtaatatttatgttttatcatcttataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AP004692.2/81818-81656 39947:Oryza sativa Japonica
Group
Length = 163
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||| || |||||||||| ||| ||||||||||||||||||||
Sbjct: 50 aaaaaacttaaaaacataagccatgagtaaagtatgattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AP008216.1/16946403-16946231 39947:Oryza sativa
Japonica Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||| |||||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 49 aaaaaaattaaaaacacaagtcacgagtaaaatactattaatgttttatcatcttataac 108
Query: 151 aacaaaaatactaattat 168
|||||| |||||||||||
Sbjct: 109 aacaaatatactaattat 126
>RF01062;MIR812;AP008208.1/31187520-31187351 39947:Oryza sativa
Japonica Group
Length = 170
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaaacactattcgtgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 109 aacaaaaatattaattat 126
>RF01062;MIR812;AP008209.1/26520610-26520441 39947:Oryza sativa
Japonica Group
Length = 170
Score = 107 bits (54), Expect = 8e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||| |||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 49 aaaaaaattaaaaatataagtcacgagtaaattactattcatgttt-atcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 108 aacaaaaatactaattat 125
>RF01062;MIR812;AP008213.1/4933213-4933383 39947:Oryza sativa
Japonica Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 48 aaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttattatcttataac 107
Query: 151 aacaaaaatactaattat 168
||||||| | ||||||||
Sbjct: 108 aacaaaattgctaattat 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 49 cgcgttcaactttgaccatccgtcttatttaa 80
|||| |||||||||| ||||||||||||||||
Sbjct: 166 cgcgctcaactttgatcatccgtcttatttaa 135
>RF01062;MIR812;AY946455.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||| ||||||||||||| | | ||||||||||||||||||
Sbjct: 48 aaaaaacttaaaaacataagtcaggagtaaagtactactcacgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 108 aacaaaaatgctaattat 125
>RF01062;MIR812;AP003735.4/57277-57448 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||||| ||||||||||| | |||||| || |||| ||||||||||||||||||||
Sbjct: 50 aaaaaatttataaacataagtcgcaagtaaaatattattcatgttttatcatctcataac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AAAA02005193.1/10952-10781 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| |
Sbjct: 49 aaaaaaattaaaaacataagtcacgagcaaagtactattcatgttttatcatctcatagc 108
Query: 151 aacaaaaatactaattat 168
|| |||||| ||||||||
Sbjct: 109 aataaaaatgctaattat 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||| |||||||||| ||||||
Sbjct: 35 aaataagacgaacgatcaaaattggacgcgga 4
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 45 tttccgcgttcaactttgaccatccgtcttatttaa 80
||||||| |||||||||| ||||||||||||||||
Sbjct: 171 tttccgctctcaactttgatcatccgtcttatttaa 136
>RF01062;MIR812;AP005175.4/49171-49011 39947:Oryza sativa Japonica
Group
Length = 161
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| || |||| |||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 37 gaaaaaaattgaaaatataagtcacgagtaaagtactattcatgttttatcatatcataa 96
Query: 150 caacaaaaatactaatt 166
||| |||||||||||||
Sbjct: 97 caataaaaatactaatt 113
>RF01062;MIR812;AAAA02020217.1/41805-41972 39946:Oryza sativa Indica
Group
Length = 168
Score = 105 bits (53), Expect = 3e-22
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 45 aaaaaaattaaaaacataagtcacacacaaagttatatttatgttttatcatctcataac 104
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
|| ||||||||||||||| |||||||||||||||||| ||||| ||||
Sbjct: 105 aataaaaatactaattataaaaagattttaaataagacgaacgttcaaagttgg 158
>RF01062;MIR812;AAAA02027909.1/43879-44038 39946:Oryza sativa Indica
Group
Length = 160
Score = 105 bits (53), Expect = 3e-22
Identities = 98/114 (85%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 38 aaaaaaattaaaaacacaagtcacgaataaagtacgattcgtgttttatcatctcataac 97
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
|| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 98 aataaaaatactaattataaaaaga-tttaaataagacgaacgatcaaaattgg 150
>RF01062;MIR812;AAAA02006966.1/65891-66058 39946:Oryza sativa Indica
Group
Length = 168
Score = 105 bits (53), Expect = 3e-22
Identities = 95/110 (86%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 100 aaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaat 159
|||||| ||||||||| |||||||| |||| |||||||||||||||||||||| ||||||
Sbjct: 57 aaaaacttaagtcacgtgtaaagtaatattcatgttttatcatctcataacaataaaaat 116
Query: 160 actaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 117 actaatta---attttttttaaataagacggacgatcaaaattgggcgcg 163
>RF01062;MIR812;AC025907.2/43108-42938 4530:Oryza sativa (rice)
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 98/114 (85%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||| |||||
Sbjct: 49 aaaaaatttaaaa-cataagtcccgaataaagtactatttatattttatcatcttataac 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
||||||||| |||||||| ||| |||||||||||| | ||||||||||
Sbjct: 108 aacaaaaatgctaattataaagaaatttcaaataagacgaaagatcaaaattgg 161
>RF01062;MIR812;AACV01008267.1/8880-8706 39947:Oryza sativa Japonica
Group
Length = 175
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 49 aaaaaatttaaaaacataagtcacgcataaagtactatttatattttattatctcataac 108
Query: 151 aacaaaaatacta 163
|| ||||||||||
Sbjct: 109 aataaaaatacta 121
>RF01062;MIR812;AACV01002640.1/21786-21619 39947:Oryza sativa
Japonica Group
Length = 168
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 49 aaaaaattaaaaatataagtcacgagaaaagtactatttatgttttatcatctcataata 108
Query: 152 acaaaaatactaattat 168
| ||||||| |||||||
Sbjct: 109 ataaaaatattaattat 125
>RF01062;MIR812;AAAA02034956.1/21004-21174 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 48 aaaaaatttaaaaacataagtcacgcataaagtactactaatgttttgtcatctcataaa 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaac 192
|| ||||||||||||||| |||||||||||||||||
Sbjct: 108 aataaaaatactaattataaaaattttttaaataagacgaac 149
>RF01062;MIR812;AACV01003457.1/7358-7188 39947:Oryza sativa Japonica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
|||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 49 aaaaatttaaaagcataagttacgcataaagtactattcatgttttatcatctcataaca 108
Query: 152 acaaaaatactaattat 168
| |||||||||||||||
Sbjct: 109 agaaaaatactaattat 125
>RF01062;MIR812;AAAA02020840.1/34861-34697 39946:Oryza sativa Indica
Group
Length = 165
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 aaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaata 160
|||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||
Sbjct: 57 aaaacataagtcacgagtaaagtactatttatgttttatcatttcatagcaataaaaatg 116
Query: 161 ctaattat 168
||||||||
Sbjct: 117 ctaattat 124
>RF01062;MIR812;AP008218.1/17839972-17840145 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||
Sbjct: 48 aaaaaaattaaaaacataagtcacgagtaaaatactattcatcttttatcatctcataac 107
Query: 151 aacaaaaa 158
||||||||
Sbjct: 108 aacaaaaa 115
>RF01062;MIR812;AP008212.1/18810223-18810054 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 92 aaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataaca 151
||||| ||||||||||| |||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 49 aaaaaattaaaaacatatgtcatgagtaaagtaatattcatgttttatcatctcataaca 108
Query: 152 acaaaaatactaatta 167
||||||||| ||||||
Sbjct: 109 acaaaaatattaatta 124
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||||| ||| |||||||||||
Sbjct: 35 aaataagacgaacggttaaagttgggcgcgga 4
>RF01062;MIR812;AP008209.1/35026388-35026560 39947:Oryza sativa
Japonica Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 105/125 (84%)
Strand = Plus / Plus
Query: 44 ttttccgcgttcaactttgaccatccgtcttatttaagannnnnnngaaaaaatttaaaa 103
|||||||| |||||||||||| | |||||||||| | | ||||||| ||||||
Sbjct: 2 ttttccgcattcaactttgacaactcgtcttatttgaaaattttttgaaaaaaattaaaa 61
Query: 104 acataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatacta 163
|||||| |||||||||||||| ||||||||||||||||||| ||||| |||||| | |||
Sbjct: 62 acataattcacgagtaaagtaatatttatgttttatcatcttataactacaaaattgcta 121
Query: 164 attat 168
|||||
Sbjct: 122 attat 126
>RF01062;MIR812;AP008207.1/13799987-13800152 39947:Oryza sativa
Japonica Group
Length = 166
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 93 aaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaa 152
|||||||||||| |||||||||||||||||||||||| |||||||| |||||||||| ||
Sbjct: 46 aaaatttaaaaatataagtcacgagtaaagtactattcatgttttaccatctcataataa 105
Query: 153 caaaaata 160
||||||||
Sbjct: 106 caaaaata 113
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 178 ttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||||||||||||| |||||| ||||||||
Sbjct: 37 ttaaataagacgaacggttaaaattaggcgcgga 4
>RF01062;MIR812;AC121365.2/126856-127026 39947:Oryza sativa Japonica
Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| || |||| ||||| |||||||||||||||||| |||||||||||| ||||||
Sbjct: 47 gaaaaaactttaaaaaataagccacgagtaaagtactattcatgttttatcatatcataa 106
Query: 150 caacaaaaatactaat 165
||||||||||||||||
Sbjct: 107 caacaaaaatactaat 122
>RF01062;MIR812;AACV01012067.1/1001-829 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgagcaaaatactattcatgttttatcatctcataat 109
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
|||||||| |||||||| |||||||||||||| ||| |||||
Sbjct: 110 aacaaaaacgctaattataaaaaaattttaaataagacggacgatcaaa 158
>RF01062;MIR812;AACV01020608.1/2962-2801 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||| ||||||||||||||| ||||||| ||||||||| |||||| ||
Sbjct: 37 gaaaaaatttaaaaacttaagtcacgagtaaattactattcatgttttatgatctcacaa 96
Query: 150 caac-aaaaatactaattat 168
|||| |||||||||||||||
Sbjct: 97 caacgaaaaatactaattat 116
>RF01062;MIR812;AAAA02004773.1/10543-10373 39946:Oryza sativa Indica
Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||| |||||||||||||||||||||| | | |||||||||| |||||
Sbjct: 48 aaaaaaattaaaaacacaagtcacgagtaaagtactattaaagctttatcatcttataac 107
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgg 210
|| ||||||||||||||| ||||||||||||||||| | ||| |||| |||||
Sbjct: 108 aataaaaatactaattataaaaaaaatttaaataagacgaacgattaaagttggacgcgg 167
Query: 211 a 211
|
Sbjct: 168 a 168
>RF01062;MIR812;AP003335.4/153903-154072 39947:Oryza sativa Japonica
Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 101 aaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaata 160
||||||||||| | ||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 57 aaaacataagttatgagtaaagttctattcatgttttatcatctcataacaacgaaaata 116
Query: 161 ctaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||| ||||||||||||| ||| ||||||||| |||||
Sbjct: 117 ctaattataaaaaaattttaaataagacagacgatcaaaattgtgcgcg 165
>RF01062;MIR812;AP005768.3/139807-139636 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactattta-tgttttatcatctcata 148
||||||| |||||||||||||||||||||||||||||||| | | ||||||||| || ||
Sbjct: 47 gaaaaaaattaaaaacataagtcacgagtaaagtactattcatttttttatcatatccta 106
Query: 149 acaacaaaaatactaattat 168
||||||||||||||||||||
Sbjct: 107 acaacaaaaatactaattat 126
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 103 bits (52), Expect = 1e-21
Identities = 118/141 (83%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 29 ataagtgcag-catgtttttccgcgttcaactttgaccatccgtcttatttaagannnnn 87
|||||||||| |||| |||||||||| ||||||||| ||| |||||||||| | |
Sbjct: 222 ataagtgcagtcatgattttccgcgtccaactttgatcattcgtcttatttgaaaaattt 163
Query: 88 nngaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcat 147
||||||| ||||||||||||||||||||||||||| | || || ||||||||||| ||
Sbjct: 162 ttgaaaaaaattaaaaacataagtcacgagtaaagtattgttcatattttatcatcttat 103
Query: 148 aacaacaaaaatactaattat 168
|||||| ||||| |||||||
Sbjct: 102 aacaaccaaaatgataattat 82
>RF01062;MIR812;AAAA02004189.1/13863-13695 39946:Oryza sativa Indica
Group
Length = 169
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 106 ataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
|||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 62 ataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatgctaat 121
Query: 166 tat 168
|||
Sbjct: 122 tat 124
>RF01062;MIR812;ABRL01000082.1/33-204 65489:Oryza barthii
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||
Sbjct: 48 gaaaaaatttgaaaacataagccacgaataaagtactattcttgttttatcatctcataa 107
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
||| |||||| ||||||| ||||||||||||||||| ||||| |||| ||||
Sbjct: 108 caaaaaaaatgttaattataaaaaaaatttaaataagacgaacgatcaaagttggtcgcg 167
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 182 ataagacgaacggtcaaaattgggcgcgga 211
||||||| |||||||||| |||||||||||
Sbjct: 34 ataagacaaacggtcaaagttgggcgcgga 5
>RF01062;MIR812;AAAA02003779.1/37338-37509 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 93 aaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaa 152
|||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||
Sbjct: 51 aaaatttaaaaacataagtcacacataaagtactattcatattttatcatctcgtaacaa 110
Query: 153 caaaaatactaatta 167
|||||||||||||||
Sbjct: 111 caaaaatactaatta 125
>RF01062;MIR812;ABRL01001405.1/19095-18926 65489:Oryza barthii
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 94/109 (86%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 101 aaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaata 160
|||| |||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||
Sbjct: 58 aaaatataagttacgagtaaagtcctattaatgttttatcatctcataacaataaaaata 117
Query: 161 ctaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||| ||| |||||||||||||| ||||||||| |||||
Sbjct: 118 ctaattat-aaataatttcaaataagacgaacgatcaaaattgagcgcg 165
>RF01062;MIR812;AACV01016492.1/19876-19710 39947:Oryza sativa
Japonica Group
Length = 167
Score = 101 bits (51), Expect = 5e-21
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 100 aaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaat 159
|||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |
Sbjct: 53 aaaaacataagtcacgagtaaagtaccattcatgttttatcatcttataacaacaaaact 112
Query: 160 actaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcgga 211
|||||||| ||| |||||| ||||||| ||||| |||| ||||||
Sbjct: 113 tctaattataaaaaaatttcaaataaaacgaacgatcaaagttggacgcgga 164
>RF01062;MIR812;AP008207.1/31033212-31033381 39947:Oryza sativa
Japonica Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 46 gaaaaaaaataaaaacataagtcacgagtaaagtattatttatgttttatcatcttataa 105
Query: 150 caacaaaaatactaattat 168
||| ||||| | |||||||
Sbjct: 106 caataaaaaaattaattat 124
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 102 aaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatac 161
|||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 60 aaacataagtcacgtataaagtactattcatgttttatcatctcataacaataaaaatac 119
Query: 162 taattat 168
|||||||
Sbjct: 120 taattat 126
>RF01062;MIR812;AP008207.1/11154446-11154276 39947:Oryza sativa
Japonica Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||| |||| ||||||| || ||||||||||| ||||
Sbjct: 47 gaaaaaatttaaaaacataagtcacgtataaaatactattcatattttatcatcttataa 106
Query: 150 caacaaaaatactaattat 168
||| |||||||||||||||
Sbjct: 107 caataaaaatactaattat 125
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 177 tttaaataagacgaacggtcaaaattgggc 206
||||||||||||| ||| ||||||||||||
Sbjct: 38 tttaaataagacggacgatcaaaattgggc 9
>RF01062;MIR812;AP008207.1/36403836-36403667 39947:Oryza sativa
Japonica Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| | ||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 46 aaaaaactaaaaaaaatatgccacgagtaaagtactatttatgttttatcatctcataac 105
Query: 151 aacaaaaatactaat 165
|| ||||||||||||
Sbjct: 106 aataaaaatactaat 120
>RF01062;MIR812;AP006186.3/121305-121135 39947:Oryza sativa Japonica
Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 98 ttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaa 157
|||||||||||||||||||||||| ||||| | || |||||||||||||||| |||||||
Sbjct: 55 ttaaaaacataagtcacgagtaaaatactaatcatattttatcatctcataataacaaaa 114
Query: 158 atactaattat 168
|||||||||||
Sbjct: 115 atactaattat 125
>RF01062;MIR812;AP008215.1/22193931-22194089 39947:Oryza sativa
Japonica Group
Length = 159
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||| |||||| |||| |||||||||||| |||||||||||||||||||
Sbjct: 36 gaaaaaatttaaaaccataagacacgtataaagtactattcatgttttatcatctcataa 95
Query: 150 caacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 96 gaataaaaatactaattat 114
>RF01062;MIR812;AAAA02002407.1/1680-1849 39946:Oryza sativa Indica
Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 98 ttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaa 157
|||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 54 ttaaaaacataagtaacgagtaaagtattatttatgttttatcatcttataacaacaaaa 113
Query: 158 atactaattat 168
|| |||||||
Sbjct: 114 atgttaattat 124
>RF01062;MIR812;AAAA02020057.1/3907-4081 39946:Oryza sativa Indica
Group
Length = 175
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 51 gaaaaaaaataaaaatataagtcataagtaaagtactatttatattttatcatctcataa 110
Query: 150 caacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 111 taacaaaaatactaattat 129
>RF01062;MIR812;AACV01006911.1/363-197 39947:Oryza sativa Japonica
Group
Length = 167
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 47 gaaaaaaaataaaaacataagtcacgagtaaagtagtattcatgttttatcatcttataa 106
Query: 150 caacaaaaatactaattat 168
|||||||| | ||||||||
Sbjct: 107 caacaaaattgctaattat 125
>RF01062;MIR812;AACV01002616.1/34373-34543 39947:Oryza sativa
Japonica Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 106 ataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
|||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 64 ataagtcacgagtaaagtactattcatgttttatcatcttataacaacaaaaatgctaat 123
Query: 166 tat 168
|||
Sbjct: 124 tat 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 177 tttaaataagacgaacggtcaaaattgggcgcgga 211
||||||||| ||||| ||||||| |||||||||||
Sbjct: 39 tttaaataaaacgaatggtcaaagttgggcgcgga 5
>RF01062;MIR812;AAAA02036738.1/10015-9844 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||| ||||||||||||||||||||| | |||||| |||| |||||
Sbjct: 49 aaaaaaattaaaaacatgagtcacgagtaaagtactattcgtattttattatcttataac 108
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 109 aacaaaaatactaattat 126
>RF01062;MIR812;AACV01006765.1/6108-5948 39947:Oryza sativa Japonica
Group
Length = 161
Score = 99.6 bits (50), Expect = 2e-20
Identities = 89/103 (86%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| | ||||||||||||||||||||||| || | |||||||| |||||
Sbjct: 39 aaaaaatttaaaa-cgtaagtcacgagtaaagtactattcatatgatatcatcttataac 97
Query: 151 aacaaaaatactaattatnnnnnnnttttaaataagacgaacg 193
|||||||||||||||||| ||||||||||||||||||
Sbjct: 98 aacaaaaatactaattataaaataattttaaataagacgaacg 140
>RF01062;MIR812;AAAA02007384.1/1216-1047 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||| |||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 49 aaaaaaattaaaaatataagtcatgagtaaaacactattcatgttttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|||||||||| |||||||
Sbjct: 109 aacaaaaatattaattat 126
>RF01062;MIR812;AAAA02021742.1/8892-8725 39946:Oryza sativa Indica
Group
Length = 168
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 53 taaaaacataaatcacaagtaaagtaatatttatgttttattatctcataacaacaaaaa 112
Query: 159 tactaattat 168
| ||||||||
Sbjct: 113 tgctaattat 122
>RF01062;MIR812;AP003928.3/22059-21890 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||
Sbjct: 48 aaaaaatttaaaa-cataagtcacgtgtaaagtgctactcatgttttatcatctcataac 106
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 107 aataaaaatactaattat 124
>RF01062;MIR812;AP008218.1/23369827-23369655 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||||| ||||||||||||| |||||||||| | || |||||||||||||| |||||
Sbjct: 50 aaaaaattgaaaaacataagtcgtgagtaaagtaatgttcatgttttatcatctgataac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AP003705.3/61480-61311 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||| |||||||||| |||| |||||||||||||| ||||
Sbjct: 47 aaaaaaattaaaaacataagtcatgagtaaagtattattcatgttttatcatcttataaa 106
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 107 aacaaaaatgctaattat 124
>RF01062;MIR812;AAAA02032978.1/4853-5023 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||
Sbjct: 48 gaaaaaatttaaaaacataagtcacgcataaagtattattcatgttttatcatctcataa 107
Query: 150 caacaaaaatactaatta 167
||| |||||||||||||
Sbjct: 108 caa-taaaatactaatta 124
>RF01062;MIR812;AAAA02014866.1/8003-8166 39946:Oryza sativa Indica
Group
Length = 164
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| | ||||| |||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 40 aaaaaaataaaaaaaataagtcacgtataaagtactatttatattttatcatctcataac 99
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 100 aataaaaatactaattat 117
>RF01062;MIR812;AAAA02014561.1/49583-49410 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 74/81 (91%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| |||||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 49 gaaaaaaattaaaaacataagtaacaagtaaagtactattaatattttatcatctcataa 108
Query: 150 caac--aaaaatactaattat 168
|||| |||||||||||||||
Sbjct: 109 caacaaaaaaatactaattat 129
>RF01062;MIR812;AP008214.1/14414734-14414905 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| | |||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 50 aaaaaaataaaaaacataagtcacgtataaagtactattcatgttttatcatctcatgac 109
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 110 aataaaaatactaattat 127
>RF01062;MIR812;AP008211.1/21341827-21341997 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 49 aaaaaaattaaaaacataagtcacgagtaaagtactattcat-ttttatcatctcaaaat 107
Query: 151 aacaaaaatactaattat 168
|||||||||||| |||||
Sbjct: 108 aacaaaaatactgattat 125
>RF01062;MIR812;AACV01013486.1/303-473 39947:Oryza sativa Japonica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||| |||||| |||||||||||| || |||||||||||| ||||
Sbjct: 48 aaaaaaattaaaaacataggtcacgcataaagtactattcatattttatcatctcgtaac 107
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 108 aacaaaaatactaattat 125
>RF01062;MIR812;CR855103.1/43560-43731 4530:Oryza sativa (rice)
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||| ||||||||||| |||||||||||||||| ||||| |||||
Sbjct: 49 aaaaaaattaaaaacataaatcacgagtaaaatactatttatgttttaccatcttataac 108
Query: 151 aacaaaaatactaattat 168
||||||| | ||||||||
Sbjct: 109 aacaaaattgctaattat 126
>RF01062;MIR812;AACV01019747.1/24938-24769 39947:Oryza sativa
Japonica Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 102 aaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatac 161
|||||||||||||| |||||||||||| ||||||||| |||| ||||||| ||||||||
Sbjct: 58 aaacataagtcacgcataaagtactattcatgttttataatctaataacaataaaaatac 117
Query: 162 taattatnnnnnnnttttaaataagacgaacggtcaaaattgg 204
|||| || |||||||||||||| ||||||||||||||
Sbjct: 118 taatcataaaataattttaaataagacggacggtcaaaattgg 160
>RF01062;MIR812;AAAA02026120.1/249-420 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||| |||||||||| |||||||||||||||||||||| || |||||||||||||||||
Sbjct: 49 aaaaattttaaaaacacaagtcacgagtaaagtactattcatattttatcatctcataac 108
Query: 151 aacaaaaatactaattat 168
|| |||||| ||| ||||
Sbjct: 109 aataaaaatgctagttat 126
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaaattgggcgc 208
||||||||||||||||||||| |||||||
Sbjct: 36 aaataagacgaacggtcaaaactgggcgc 8
>RF01062;MIR812;AP003338.3/4697-4870 39947:Oryza sativa Japonica
Group
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||| ||||| |||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 58 taaaaatataagccacgagtaaagtactattcatattttatcatctcgtaacaacaaaaa 117
Query: 159 tactaattat 168
||||||||||
Sbjct: 118 tactaattat 127
>RF01062;MIR812;AACV01015595.1/7698-7548 39947:Oryza sativa Japonica
Group
Length = 151
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||| ||||||||| ||||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 29 aaaaattttaaaaacgtaagtcacgagtatagcactatttatgttttatcatcttataac 88
Query: 151 aacaaaaatactaattat 168
|||||| ||| |||||||
Sbjct: 89 aacaaagatattaattat 106
>RF01062;MIR812;AP008210.1/28165092-28164921 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||| ||||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 49 aaaaaaattaaagacataagtcacgagtaaagtaatatccatgttttatcatcttataac 108
Query: 151 aacaaaaatactaattat 168
||||||||| ||||||||
Sbjct: 109 aacaaaaatgctaattat 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 178 ttaaataagacgaacggtcaaaattgggcgc 208
|||||||||||||| ||||||||||| ||||
Sbjct: 38 ttaaataagacgaatggtcaaaattgagcgc 8
>RF01062;MIR812;AL772427.4/92117-91947 4530:Oryza sativa (rice)
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
||||||||||||||| |||| || | ||||||||||||| |||||||||||||||||||
Sbjct: 48 aaaaaatttaaaaacttaagccatgcataaagtactatttgtgttttatcatctcataac 107
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 108 aataaaaatactaattat 125
>RF01062;MIR812;AAAA02008846.1/795-964 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||| |||| ||||||| || ||||||||||| |||||
Sbjct: 47 aaaaaaattaaaaacataagtcacgtataaaatactattcatattttatcatctaataac 106
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 107 aacaaaaatactaattat 124
>RF01062;MIR812;AAAA02031787.1/687-513 39946:Oryza sativa Indica
Group
Length = 175
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||| | ||| ||||||||||| ||||||||||||||||| ||
Sbjct: 51 aaaaaaattaaaaacataagtaatgagcaaagtactattcatgttttatcatctcat-ac 109
Query: 151 aacaaaaatactaattat 168
||||||||||||||||||
Sbjct: 110 aacaaaaatactaattat 127
>RF01062;MIR812;AAAA02011210.1/47142-47314 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 50 aaaaaaattaaaaacataagtcacgagtaaagtattattcatgttttatcatcttataat 109
Query: 151 aacaaaaatactaattat 168
||||||||| ||| ||||
Sbjct: 110 aacaaaaatgctatttat 127
>RF01062;MIR812;AAAA02024783.1/5623-5452 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| | |||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 50 aaaaaaataaaaaacataagtcacgtataaagtactattcatgttttatcatctcatgac 109
Query: 151 aacaaaaatactaattat 168
|| |||||||||||||||
Sbjct: 110 aataaaaatactaattat 127
