miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01013846.1/34700-34544 39947:Oryza sativa
Japonica Group
Length = 157
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
|||||||||||||||||||||||||||||||||||| || ||| ||| ||||| || |||
Sbjct: 41 ggatgtgacactttatagtacaacgaatctggacaggaagcatgtctggattcattgtac 100
Query: 84 tatgaagtgtctcgttcggtactagattgctatattat 121
||| ||||||| | | ||||||||||||||||||||||
Sbjct: 101 tatcaagtgtcccatccggtactagattgctatattat 138
>RF00906;MIR1122;AL606635.3/21906-21750 39947:Oryza sativa Japonica
Group
Length = 157
Score = 115 bits (58), Expect = 1e-25
Identities = 103/118 (87%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
|||||| ||| ||| ||||||||| ||||||| || ||||||||||||||| ||| ||
Sbjct: 22 aatatagcaacctagaaccggatgagacacttcatggtacaacgaatctgggcaggaagt 81
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatattata 122
|| || |||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 82 atgtccggattcgttgtactatgaagtgtctcgttcggtactaggttgctatattata 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 30 gacactttatagtacaacgaatctggacagaaaacatatctagattcgttatactatgaa 89
||||||| ||||||||||||||| ||||| | | | | ||||||||| ||| |||||
Sbjct: 111 gacacttcatagtacaacgaatccggacatacttcctgcccagattcgttgtaccatgaa 52
Query: 90 gtgtctcgttcggtactagattgctatattat 121
||||||| | |||| |||| ||||||||||||
Sbjct: 51 gtgtctcatccggttctaggttgctatattat 20
>RF00906;MIR1122;AAAA02032515.1/3115-3271 39946:Oryza sativa Indica
Group
Length = 157
Score = 111 bits (56), Expect = 2e-24
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 26 atgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatacta 85
||||||||||||||| ||||| |||||||||||| || |||||| ||||||| |||||
Sbjct: 43 atgtgacactttataatacaatgaatctggacaggaagcatatccgaattcgttgtacta 102
Query: 86 tgaagtgtctcgttcggtactagattgctatattat 121
|||||| |||||| ||||||||||||||||||||||
Sbjct: 103 tgaagtatctcgtccggtactagattgctatattat 138
>RF00906;MIR1122;AAAA02014936.1/13983-13869 39946:Oryza sativa
Indica Group
Length = 115
Score = 109 bits (55), Expect = 9e-24
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
|||||| ||| ||| ||||||||| ||||||| || ||||||||||||||| ||| ||
Sbjct: 1 aatatagcaacctagaaccggatgagacacttcatggtacaacgaatctgggcaggaagt 60
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatatt 119
|| || |||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 atgtccggattcgttgtactatgaagtgtctcgttcggtactaggttgctatatt 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 30 gacactttatagtacaacgaatctggacagaaaacatatctagattcgttatactatgaa 89
||||||| ||||||||||||||| ||||| | | | | ||||||||| ||| |||||
Sbjct: 90 gacacttcatagtacaacgaatccggacatacttcctgcccagattcgttgtaccatgaa 31
Query: 90 gtgtctcgttcggtactagattgctatatt 119
||||||| | |||| |||| ||||||||||
Sbjct: 30 gtgtctcatccggttctaggttgctatatt 1
>RF00906;MIR1122;AC134256.4/172189-172345 39947:Oryza sativa
Japonica Group
Length = 157
Score = 107 bits (54), Expect = 3e-23
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgtta 80
|||||||||||||||| |||||||||||||| | ||||| || ||| || ||||||||
Sbjct: 38 accggatgtgacacttcatagtacaacgaatttagacaggaagcatgtccggattcgttg 97
Query: 81 tactatgaagtgtctcgttcggtactagattgctatattata 122
||||||||||||||| || ||||||||| |||||||||||||
Sbjct: 98 tactatgaagtgtcttgtccggtactaggttgctatattata 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 30 gacactttatagtacaacgaatctggacagaaaacatatctagattcgttatactatgaa 89
||||||| ||||||||||||||| ||||| | | |||| ||||||| |||||||||
Sbjct: 111 gacacttcatagtacaacgaatccggacatgcttcctgtctaaattcgttgtactatgaa 52
Query: 90 gtgtctcgttcggtactagattgctatattat 121
||||| | | |||| |||| ||||||||||||
Sbjct: 51 gtgtcacatccggtcctaggttgctatattat 20
>RF00906;MIR1122;AP003711.3/78857-78701 39947:Oryza sativa Japonica
Group
Length = 157
Score = 107 bits (54), Expect = 3e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
|||| |||||||||||||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 42 gatgggacactttatagtacaacgaatctggacaggaagcatattcggattcgttgtact 101
Query: 85 atgaagtgtctcgttcggtactagattgctatattata 122
||||||||| |||| |||||||| |||||||||||||
Sbjct: 102 atgaagtgtttcgtccggtactatgttgctatattata 139
>RF00906;MIR1122;EU337975.1/586-742 39946:Oryza sativa Indica Group
Length = 157
Score = 97.6 bits (49), Expect = 3e-20
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgtta 80
|||||||||||||||| |||||||||||||||||||||| || ||| | |||||||
Sbjct: 120 accggatgtgacacttcatagtacaacgaatctggacagtaagcatgttcggattcgtgg 61
Query: 81 tactatgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||||||||| ||||||||| | |||||||||
Sbjct: 60 tactatgaagtgtctcgtccggtactaggctactatattat 20
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 71 agattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
||||||||| |||||||||||||| | | |||| |||| ||||||||||||
Sbjct: 88 agattcgttgtactatgaagtgtcacatccggtcctaggttgctatattat 138
>RF00906;MIR1122;AACV01003486.1/94-250 39947:Oryza sativa Japonica
Group
Length = 157
Score = 91.7 bits (46), Expect = 2e-18
Identities = 91/106 (85%)
Strand = Plus / Minus
Query: 16 ctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaacatatctagatt 75
|||| |||||||| ||||||| || ||||||| |||||||| ||||||||| || |||||
Sbjct: 125 ctaagaccggatgggacacttcatggtacaacaaatctggatagaaaacatgtccagatt 66
Query: 76 cgttatactatgaagtgtctcgttcggtactagattgctatattat 121
| || |||||||||||||| | ||||||||||||| ||||||||
Sbjct: 65 cattgtactatgaagtgtcatatccggtactagattgttatattat 20
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| ||||||| |||||||| ||||||||| |||||||||||
Sbjct: 22 aatataacaatctagtaccggatatgacacttcatagtacaatgaatctggaca 75
>RF00906;MIR1122;AP008209.1/26976879-26977035 39947:Oryza sativa
Japonica Group
Length = 157
Score = 89.7 bits (45), Expect = 8e-18
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
|||||| ||| ||||||||||||| || |||| ||| |||||||||||||||||| || |
Sbjct: 22 aatatagcaacctaaaaccggatgggatacttcatattacaacgaatctggacaggaagc 81
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
| || || || || ||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 82 ttgtccggaatcattgtactatgaagtatctcgtccggtactagattgttatattat 138
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
|||||||||||| ||||||||| |||||| ||||| || ||| | | |||||||| ||||
Sbjct: 42 gatgtgacacttgatagtacaatgaatctagacagtaagcatgtttggattcgttgtact 101
Query: 85 atgaagtgtctcgttcggtactagattgctatattat 121
|| ||||||||||| |||||||| ||||||||||||
Sbjct: 102 ataaagtgtctcgtctggtactaggttgctatattat 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 30 gacactttatagtacaacgaatc 52
|||||||||||||||||||||||
Sbjct: 111 gacactttatagtacaacgaatc 89
>RF00906;MIR1122;AP002908.2/68380-68536 39947:Oryza sativa Japonica
Group
Length = 157
Score = 89.7 bits (45), Expect = 8e-18
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgtta 80
||||||| |||||||| |||||||||||||||||||||| | || |||||||||
Sbjct: 120 accggatatgacacttcatagtacaacgaatctggacaggcttactgtccagattcgttg 61
Query: 81 tactatgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||||||||| ||||||||| || |||||||||
Sbjct: 60 tactatgaagtgtctcgtccggtactaggttactatattat 20
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgtta 80
|||||| | ||||||| |||||||||||||||||||||| || | | || |||||||||
Sbjct: 38 accggacgagacacttcatagtacaacgaatctggacagtaagcctgtccagattcgttg 97
Query: 81 tactatgaagtgtc 94
||||||||||||||
Sbjct: 98 tactatgaagtgtc 111
>RF00906;MIR1122;AAAA02020247.1/9682-9526 39946:Oryza sativa Indica
Group
Length = 157
Score = 85.7 bits (43), Expect = 1e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 31 acactttatagtacaacgaatctggacagaaaacatatctagattcgttatactatgaag 90
|||||| |||||||||||||||||||||| || |||||| ||||||||| |||||| |||
Sbjct: 48 acacttcatagtacaacgaatctggacaggaagcatatccagattcgttgtactataaag 107
Query: 91 tgtctcgttcggtactagattgctatattat 121
|||| | | | | |||||||||||||||||
Sbjct: 108 tgtcccatctgattctagattgctatattat 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
|||||| ||||||| || | |||| ||||||||||||||||||||||||||| | |
Sbjct: 136 aatatagcaatctagaatcagatgggacactttatagtacaacgaatctggatatgcttc 77
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatattata 122
| || ||||||||| ||||||||||||| |||| |||||||| || ||||||||||
Sbjct: 76 ctgtccagattcgttgtactatgaagtgtttcgtccggtactatgttactatattata 19
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
||||||||||||||||||||||||||||||||||| || ||| || ||||| || |||
Sbjct: 117 ggatgtgacactttatagtacaacgaatctggacaagaagcatgtccggattcattgtac 58
Query: 84 tatgaagtgtctcgttcggtactagattgctatattat 121
|||||| |||||||| | ||||| ||||||||||||
Sbjct: 57 tatgaaatgtctcgtcctatactatgttgctatattat 20
>RF00906;MIR1122;AP008209.1/30325748-30325904 39947:Oryza sativa
Japonica Group
Length = 157
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 41 gtacaacgaatctggacagaaaacatatctagattcgttatactatgaagtgtctcgttc 100
|||||||||||||||| || |||||| || |||||| || |||||||||||||| | | |
Sbjct: 58 gtacaacgaatctggataggaaacatgtccagattcattgtactatgaagtgtcacatcc 117
Query: 101 ggtactagattgctatattat 121
|||||||||||| ||||||||
Sbjct: 118 ggtactagattgttatattat 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| |||||||||||||||| ||||||||| |||||||||||
Sbjct: 136 aatataacaatctagtaccggatgtgacacttcatagtacaatgaatctggaca 83
>RF00906;MIR1122;AP008207.1/915692-915536 39947:Oryza sativa
Japonica Group
Length = 157
Score = 81.8 bits (41), Expect = 2e-15
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
|||||||||||| ||||||||| |||||| |||| || || | |||| ||| ||||
Sbjct: 42 gatgtgacacttcatagtacaatgaatctaaacagtaagcaggttcggatttgttgtact 101
Query: 85 atgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||||| ||||||||||||||||||||||
Sbjct: 102 atgaagtgtctcgtccggtactagattgctatattat 138
>RF00906;MIR1122;AACV01013196.1/2181-2029 39947:Oryza sativa
Japonica Group
Length = 153
Score = 75.8 bits (38), Expect = 1e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
|||||||||||||||||||| |||||||||||||| || ||| || ||||| || |||
Sbjct: 37 ggatgtgacactttatagtataacgaatctggacaagaagcatgtccggattcattgtac 96
Query: 84 tatgaagtgtctcgttcggtactagattgctatattat 121
|||||| |||||||| | ||||| ||||||||||||
Sbjct: 97 tatgaaatgtctcgtcctatactatgttgctatattat 134
>RF00906;MIR1122;AAAA02005311.1/24621-24777 39946:Oryza sativa
Indica Group
Length = 157
Score = 73.8 bits (37), Expect = 5e-13
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgtta 80
|||||||| ||||||| || |||||| |||||||| || |||||| || |||||| ||
Sbjct: 38 accggatgggacacttcatggtacaataaatctggataggaaacatgtccagattcattg 97
Query: 81 tactatgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||||| | ||||||||||||| ||||||||
Sbjct: 98 tactatgaagtgtcatatccggtactagattgttatattat 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| ||||||| |||||||| ||||||||| |||||||||||
Sbjct: 136 aatataacaatctagtaccggatatgacacttcatagtacaatgaatctggaca 83
>RF00906;MIR1122;AP002485.2/92019-92165 39947:Oryza sativa
Japonica Group
Length = 147
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 13 aatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct: 30 aatctaaaaccggacgagacacttcatagtacaacgaatctggaca 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 71 agattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
||||||||| |||||||||||||||||| |||| |||||| |||||||||
Sbjct: 70 agattcgttgtactatgaagtgtctcgtccggttttagattactatattat 20
>RF00906;MIR1122;AP008216.1/17487566-17487411 39947:Oryza sativa
Japonica Group
Length = 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
|||||||||||| ||| || |||||||||||| || || ||| || ||||| || ||||
Sbjct: 41 gatgtgacacttcatattataacgaatctggatagtaagcatgtccggattcattgtact 100
Query: 85 atgaagtgtctcgttcggtactagattgctatattat 121
|||||||||| ||| || |||||| ||| ||||||||
Sbjct: 101 atgaagtgtcacgtccgctactaggttgttatattat 137
>RF00906;MIR1122;ABRL01001053.1/5989-5833 65489:Oryza barthii
Length = 157
Score = 65.9 bits (33), Expect = 1e-10
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
||||||||||| || || | |||| ||||||| | |||||| |||||||| || ||||
Sbjct: 22 aatataacaatttagaatcagatgggacacttcttggtacaagaaatctggatagtaaac 81
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
|| || |||||||| |||||||||||||||||| | ||||| ||||||||||||
Sbjct: 82 atgtccggattcgttgtactatgaagtgtctcgtctgaaactaggttgctatattat 138
>RF00906;MIR1122;AACV01013085.1/19238-19395 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 5e-10
Identities = 87/103 (84%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatc--tagattcgt 78
||||||| |||||||||||||||||| ||||||| |||| || ||| || | |||||
Sbjct: 121 accggatatgacactttatagtacaatgaatctgaacaggaagcatgtccgaattttcgt 62
Query: 79 tatactatgaagtgtctcgttcggtactagattgctatattat 121
| ||||||||| ||| |||| |||||| |||||||||||||||
Sbjct: 61 tgtactatgaaatgtttcgtccggtac-agattgctatattat 20
>RF00906;MIR1122;AACV01002428.1/16152-15997 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 23 cggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttata 82
|||||||||||||||| ||||||| |||||||| || |||||| |||| ||||||| |
Sbjct: 117 cggatgtgacactttacagtacaatgaatctgg-taggaaacatgtctaaattcgttgca 59
Query: 83 ctatgaagtgtctcgttcggtactagattgctatattata 122
|||| ||||||| | ||||| ||| |||||||||||||
Sbjct: 58 ctataaagtgtcatatccggtagtaggttgctatattata 19
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 accggatgtgacactttatagtacaacgaat 51
||||||| |||||||||||||| ||||||||
Sbjct: 38 accggatatgacactttatagtgcaacgaat 68
>RF00906;MIR1122;AAAA02001787.1/17032-16917 39946:Oryza sativa
Indica Group
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 68 tctagattcgttatactatgaagtgtctcgttcggtactagattgctatattata 122
|||||||||||| | ||||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 73 tctagattcgttgtcctatgaaatgtctcgttcggtcctaggttgatatattata 19
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggaca 58
||||||||||| |||||||||||||||||||||||
Sbjct: 117 ggatgtgacacattatagtacaacgaatctggaca 83
>RF00906;MIR1122;AP008209.1/2115790-2115631 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 71 agattcgttatactatgaagtgtctcgttcggtactagattgctatatta 120
|||||| ||||||||||| |||||| | |||||||||||||||||||||
Sbjct: 70 agattcattatactatgagatgtctcatccggtactagattgctatatta 21
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 100 cggtactagattgctatattat 121
||||||||||||||||||||||
Sbjct: 120 cggtactagattgctatattat 141
>RF00906;MIR1122;AAAA02008915.1/13725-13567 39946:Oryza sativa
Indica Group
Length = 159
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 72 gattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||||||||| ||| |||| | ||||| ||||||||||||||
Sbjct: 69 gattcgttatactatgaaatgtttcgtccagtacttgattgctatattat 20
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
||||||||||| || |||||||||||||||||||| ||| | | || ||||||||| |||
Sbjct: 117 ggatgtgacacattctagtacaacgaatctggacataaagcctgtccagattcgttgtac 58
Query: 84 ta 85
||
Sbjct: 57 ta 56
>RF00906;MIR1122;AP008211.1/22476267-22476112 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 7e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| ||||||||||||| || ||||||||| |||||| ||||
Sbjct: 22 aatataacaatctagtaccggatgtgacatttcatagtacaatgaatctagaca 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 68 tctagattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
||||||||| || ||||||||| |||| | | ||||||||||||| ||||||||
Sbjct: 73 tctagattcattgtactatgaaatgtcacatccggtactagattgttatattat 20
>RF00906;MIR1122;AAAA02034764.1/9751-9907 39946:Oryza sativa Indica
Group
Length = 157
Score = 58.0 bits (29), Expect = 3e-08
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
||||| |||||| ||||||||| |||||||||||| || |||||| ||||||| ||||
Sbjct: 116 gatgtaacacttcatagtacaatgaatctggacaggaagcatatccgtattcgttgtact 57
Query: 85 atgaagtgtctcgttcggtactagattgctatattat 121
|| |||| || | |||| |||||| | | ||||||||
Sbjct: 56 ataaagtatcccattcgatactaggtcgttatattat 20
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggacaga 60
||||||||||| || ||||||||||||||||||||||
Sbjct: 41 ggatgtgacacattctagtacaacgaatctggacaga 77
>RF00906;MIR1122;AP008214.1/337131-337286 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 3e-08
Identities = 81/97 (83%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
|||| |||| ||||||||||||||||||||||||| | | | ||||||| || ||||
Sbjct: 42 gatgggacattttatagtacaacgaatctggacag-gaggttgtatagattcattgtact 100
Query: 85 atgaagtgtctcgttcggtactagattgctatattat 121
||||| |||| ||| | |||||||||||||||||||
Sbjct: 101 atgaaatgtcacgtctgatactagattgctatattat 137
>RF00906;MIR1122;AACV01006359.1/1475-1631 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 3e-08
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatact 84
|||| ||||||| || |||||| ||||||| | || |||||| || |||||||| || |
Sbjct: 42 gatgggacacttcatggtacaaggaatctgaatagtaaacatgtccggattcgttgtatt 101
Query: 85 atgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||||| | ||||| ||||||||||||
Sbjct: 102 atgaagtgtctcgtctgaaactaggttgctatattat 138
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggacag 59
|||||||| |||||||||||| ||||||||||||||
Sbjct: 99 ggatgtgatactttatagtactacgaatctggacag 64
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 12 caatctaaaaccggatgtgacactttatagtacaacgaatctggacag 59
|||||||| || ||||||||||| | |||||||||||||||||||||
Sbjct: 108 caatctaatactggatgtgacacatcctagtacaacgaatctggacag 61
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 80/96 (83%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
||||| ||||| || ||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 41 ggatgggacacattctagtacaacgaatctggacag-gggtatatccagattcgttgtac 99
Query: 84 tatgaagtgtctcgttcggtactagattgctatatt 119
|| |||||||||| | | |||| || ||||||||||
Sbjct: 100 taggaagtgtctcatccagtacaaggttgctatatt 135
>RF00906;MIR1122;AAAA02017713.1/95926-95807 39946:Oryza sativa
Indica Group
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatc 52
|||||||||||||| ||| |||| |||| ||||||||||||||||||
Sbjct: 22 aatataacaatctagtaccagatgggacattttatagtacaacgaatc 69
>RF00906;MIR1122;AAAA02035091.1/6870-7011 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| |||||| |||||||||||||
Sbjct: 41 ggatgtgacactttctagtactacgaatctggaca 75
>RF00906;MIR1122;AC025905.3/47917-48072 4530:Oryza sativa (rice)
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 35 tttatagtacaacgaatctggacagaaaacatatctagattcgttatactatgaa 89
||||||| ||||||||||||||||| | |||| || ||||||||| |||||||||
Sbjct: 52 tttataggacaacgaatctggacag-atacatgtccagattcgttgtactatgaa 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggaca 58
||||||||||| | || |||||||||||||||||||||
Sbjct: 119 accggatgtgatatttcatagtacaacgaatctggaca 82
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
Indica Group
Length = 122
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggacag 59
||||||||||||| || |||||||||||||| |||||||
Sbjct: 85 accggatgtgacatttcatagtacaacgaatatggacag 47
>RF00906;MIR1122;AP006461.3/116161-116316 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 68 tctagattcgttatactatgaagtgtctcgttcggtactagattgctatattata 122
||||||||| || ||||||||| |||| | | ||||||||| |||||||||||||
Sbjct: 73 tctagattcattgtactatgaaatgtcacatccggtactaggttgctatattata 19
Score = 50.1 bits (25), Expect = 7e-06
Identities = 83/101 (82%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 21 accggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgtta 80
||||||||||||| || ||||||||| |||||| |||| | | |||| ||||||| |
Sbjct: 38 accggatgtgacatttcatagtacaatgaatctagaca-atctcctatccagattcgctc 96
Query: 81 tactatgaagtgtctcgttcggtactagattgctatattat 121
||||||||| |||| | | | ||||||||||| ||||||||
Sbjct: 97 tactatgaaatgtcccatccagtactagattgatatattat 137
>RF00906;MIR1122;AP008214.1/2934446-2934579 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 83 ctatgaagtgtctcgttcggtactagattgctatattat 121
||||||| ||||||||||||| ||| |||||||||||||
Sbjct: 77 ctatgaaatgtctcgttcggtcctatattgctatattat 115
>RF00906;MIR1122;ABRL01000725.1/6908-6752 65489:Oryza barthii
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaat 51
|||||||||| |||| ||| |||| || |||||||||||||||||||
Sbjct: 22 aatataacaacctaataccagatgggatactttatagtacaacgaat 68
>RF00906;MIR1122;AP004636.3/36389-36234 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggaca 58
|||||||||| ||| ||||||||||||||||||||
Sbjct: 41 ggatgtgacattttctagtacaacgaatctggaca 75
>RF00906;MIR1122;AL731884.4/124412-124271 4530:Oryza sativa (rice)
Length = 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| |||||| |||||||||||||
Sbjct: 102 ggatgtgacactttctagtactacgaatctggaca 68
>RF00906;MIR1122;AAAA02022617.1/34247-34092 39946:Oryza sativa
Indica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 35 tttatagtacaacgaatctggacaga 60
||||||||||||||||||||||||||
Sbjct: 105 tttatagtacaacgaatctggacaga 80
>RF00906;MIR1122;AACV01005493.1/30553-30709 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
|||||||||| || |||||||||||||||||| ||| ||| ||||||||| || |||
Sbjct: 41 ggatgtgacatttcatagtacaacgaatctgggcaggccgcatgtctagattcattgtac 100
Query: 84 tatgaa 89
||||||
Sbjct: 101 tatgaa 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 71 agattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
||||||||| ||||||||| |||| | | | |||||||||||||||||||
Sbjct: 70 agattcgttgtactatgaaatgtcacatcctatactagattgctatattat 20
>RF00906;MIR1122;AP004378.5/54695-54821 39947:Oryza sativa
Japonica Group
Length = 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 13 aatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||| || ||||| |||| ||||||||||||||||||||||||
Sbjct: 30 aatctagaatcggataagacattttatagtacaacgaatctggaca 75
>RF00906;MIR1122;AP004031.3/125858-125981 39947:Oryza sativa
Japonica Group
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||| ||| |||||| | |||| || |||||||||||||||||||||
Sbjct: 103 aatataacaacctaggaccggacgagacatttcatagtacaacgaatctggaca 50
>RF00906;MIR1122;AAAA02005541.1/45284-45440 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 7e-06
Identities = 94/117 (80%)
Strand = Plus / Minus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
|||||||||||||| |||||||| |||| || ||||| || |||||| ||||| |
Sbjct: 136 aatataacaatctataaccggataagacatttcatagtcaaatgaatctagacaggaggt 77
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
|||| ||||||||| ||||||||| ||||| | | || |||| ||||||||||||
Sbjct: 76 ctatccagattcgttgtactatgaaacgtctcatcctgttctaggttgctatattat 20
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 7e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 26 atgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatacta 85
||||||||| || ||||||||| ||| |||| | ||| |||||| | |||||||||||||
Sbjct: 43 atgtgacacattctagtacaacaaatttggatataaagcatatccaaattcgttatacta 102
Query: 86 tgaagtgtc 94
|| |||||
Sbjct: 103 ggatgtgtc 111
>RF00906;MIR1122;AAAA02007473.1/30171-30327 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 7e-06
Identities = 94/117 (80%)
Strand = Plus / Minus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacagaaaac 64
|||||||||||||| ||||||| |||| || ||||||||| |||||| |||| | |
Sbjct: 136 aatataacaatctaggaccggataagacatttcatagtacaatgaatctagacatgaggc 77
Query: 65 atatctagattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
| | ||||||||||||||||||| |||| | | |||||||||||||||||||
Sbjct: 76 ctgttcagattcgttatactatgaaatgtcacatcttatactagattgctatattat 20
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa
Japonica Group
Length = 117
Score = 50.1 bits (25), Expect = 7e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 3 aaaatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggacag 59
||||||||| || ||| |||||||| || | ||| |||||||||||||||||||||
Sbjct: 20 aaaatataagaacctaggaccggatgggatattttctagtacaacgaatctggacag 76
>RF00906;MIR1122;AP008212.1/7989879-7989724 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 12 caatctaaaaccggatgtgacactttatagtacaacgaatctggacaga 60
||||||| ||||||| |||| || |||||||||||||||||||||||
Sbjct: 128 caatctatgaccggataagacatttcatagtacaacgaatctggacaga 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| ||| ||||| || || ||||||||| |||||||||||
Sbjct: 22 aatataacaatctagaactggatgggatgtttcatagtacaatgaatctggaca 75
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggacaga 60
||||||||||| | ||||||||||||||||||||||
Sbjct: 77 ggatgtgacacatcctagtacaacgaatctggacaga 41
>RF00906;MIR1122;AACV01014976.1/8552-8680 39947:Oryza sativa
Japonica Group
Length = 129
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 25 gatgtgacactttatagtacaacgaatctgga 56
||||||||| ||| ||||||||||||||||||
Sbjct: 42 gatgtgacattttctagtacaacgaatctgga 73
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 3 aaaatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
||||||||| || ||| |||||||||| || ||| |||||| |||||||||||||
Sbjct: 20 aaaatataagaacctaggaccggatgtggcattttctagtactacgaatctggaca 75
>RF00906;MIR1122;AACV01001132.1/47322-47207 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggacaga 60
|||||||| |||| ||||||| ||||||||||| ||||||
Sbjct: 79 accggatgagacattttataggacaacgaatctagacaga 40
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 68 tctagattcgttatactatgaagtgtctcgttcggtactagattgctatattat 121
|||||||||||| | |||| || |||||| | |||| |||| ||||||||||||
Sbjct: 44 tctagattcgttgtcctataaaatgtctcatccggtcctaggttgctatattat 97
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggacag 59
||||||||||| | |||||||||||||||||||||
Sbjct: 41 ggatgtgacacatcctagtacaacgaatctggacag 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggaca 58
||||||||||| | ||||||||||||||||||||
Sbjct: 116 ggatgtgacacatcctagtacaacgaatctggaca 82
>RF00906;MIR1122;AACV01012603.1/10671-10517 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 23 cggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||| |||||||||||||||||||||
Sbjct: 41 cggatgtgacacaacatagtacaacgaatctggaca 76
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 23 cggatgtgacactttatagtacaacgaatctggaca 58
||||| ||||||| |||||||||||||||||||||
Sbjct: 118 cggatatgacactacatagtacaacgaatctggaca 83
>RF00906;MIR1122;AAAA02005503.1/88868-88764 39946:Oryza sativa
Indica Group
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 28 gtgacactttatagtacaacgaatctggacag 59
|||||||||||||| || ||||||||||||||
Sbjct: 1 gtgacactttataggactacgaatctggacag 32
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 28 gtgacactttatagtacaacgaatctggacag 59
|||||||||||||| || ||||||||||||||
Sbjct: 105 gtgacactttataggactacgaatctggacag 74
>RF00906;MIR1122;AP004667.3/103468-103313 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctgga 56
|||||| ||| ||| ||| ||||| |||| |||||| |||||||||||||||
Sbjct: 22 aatatagcaacctataactggatgggacattttatattacaacgaatctgga 73
>RF00906;MIR1122;AAAA02004945.1/9210-9077 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tttatagtacaacgaatctggaca 58
||||||||||||||||||||||||
Sbjct: 52 tttatagtacaacgaatctggaca 75
>RF00906;MIR1122;AC037426.12/45307-45458 39947:Oryza sativa
Japonica Group
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 20 aaccggatgtgacactttatagtacaacgaatctggaca 58
|||||||| |||||| || |||||| |||||||||||||
Sbjct: 37 aaccggatatgacacgttctagtactacgaatctggaca 75
>RF00906;MIR1122;AAAA02014808.1/30258-30413 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggacagaaaacatatctagattcgttatac 83
||||| |||| || |||||||||||||||| |||||| || ||||| |||||| || |||
Sbjct: 116 ggatgggacatttcatagtacaacgaatctagacagataa-atatccagattcattgtac 58
Query: 84 tat 86
|||
Sbjct: 57 tat 55
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 3 aaaatataacaatctaaaaccggatgtgacactttatagtacaacgaatct 53
||||||||| || ||| ||||||||||||| ||| |||||| ||||||||
Sbjct: 102 aaaatataagaacctaggaccggatgtgacattttctagtactacgaatct 52
>RF00906;MIR1122;AC145810.3/47756-47629 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 ttatagtacaacgaatctggaca 58
|||||||||||||||||||||||
Sbjct: 48 ttatagtacaacgaatctggaca 70
>RF00906;MIR1122;AAAA02035130.1/4826-4960 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 25 gatgtgacactttatagtacaacgaatctggacag 59
|||| ||||| || |||||||||||||||||||||
Sbjct: 94 gatgcgacacattctagtacaacgaatctggacag 60
>RF00906;MIR1122;AAAA02017424.1/35532-35675 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctg 54
|||||||||||||||||| || |||||||||
Sbjct: 104 ggatgtgacactttataggactacgaatctg 74
>RF00906;MIR1122;AP002869.1/81681-81526 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 38 atagtacaacgaatctggacaga 60
|||||||||||||||||||||||
Sbjct: 102 atagtacaacgaatctggacaga 80
>RF00906;MIR1122;AACV01005146.1/7057-7197 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 91 tgtctcgttcggtactagattgctatattat 121
|||||||| |||| |||||||||||||||||
Sbjct: 50 tgtctcgtacggtcctagattgctatattat 20
>RF00906;MIR1122;AP008217.1/24769050-24768917 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 21 accggatgtgacactttatagtacaacgaatctggacag 59
|||||||| |||| ||| || ||||||||||||||||||
Sbjct: 38 accggatgggacattttctaatacaacgaatctggacag 76
>RF00906;MIR1122;AP008208.1/29387042-29386887 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 24 ggatgtgacactttatagtacaacgaatctggaca 58
|||||||||| |||||||||||| |||||| ||||
Sbjct: 41 ggatgtgacattttatagtacaatgaatctagaca 75
>RF00906;MIR1122;AB206885.1/121-10 39947:Oryza sativa Japonica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 13 aatctaaaaccggatgtgacactttatagtacaacgaat 51
|||||||||| ||||||||||| || ||||||| |||||
Sbjct: 83 aatctaaaactggatgtgacacattctagtacagcgaat 45
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 16 ctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
|||| |||||||||||||| || |||||| | |||||||||||
Sbjct: 123 ctaataccggatgtgacacattctagtactatgaatctggaca 81
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa
Japonica Group
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctg 54
|||||||| |||||||||||| |||||||||
Sbjct: 79 ggatgtgatactttatagtactacgaatctg 49
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
Indica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 29 tgacactttatagtacaacgaatctggaca 58
|||||| || ||||||||||||||||||||
Sbjct: 47 tgacacattctagtacaacgaatctggaca 76
>RF00906;MIR1122;AACV01011889.1/2622-2752 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 atagtacaacgaatctggacag 59
||||||||||||||||||||||
Sbjct: 77 atagtacaacgaatctggacag 56
>RF00906;MIR1122;AACV01012172.1/17743-17893 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 84 tatgaagtgtctcgttcggtactagattgctatattat 121
|||||| |||| ||| ||||||||| ||||||||||||
Sbjct: 95 tatgaaatgtcacgtccggtactaggttgctatattat 132
>RF00906;MIR1122;AAAA02020328.1/21348-21502 39946:Oryza sativa
Indica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 5 aatataacaatctaaaaccggatgtgacactttatagtacaacgaatctggaca 58
||||||| |||||| ||| |||| |||| || ||||||||| |||||||||||
Sbjct: 22 aatataataatctagaactagatgagacatttcatagtacaatgaatctggaca 75
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tagtacaacgaatctggacaga 60
||||||||||||||||||||||
Sbjct: 56 tagtacaacgaatctggacaga 77
>RF00906;MIR1122;AP005826.3/13057-12891 39947:Oryza sativa Japonica
Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggaca 58
||||||| ||||| || |||||||| ||||||||||||
Sbjct: 131 accggatttgacatttcatagtacaccgaatctggaca 94
>RF00906;MIR1122;AC137623.3/3519-3674 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 100 cggtactagattgctatattat 121
||||||||||||||||||||||
Sbjct: 41 cggtactagattgctatattat 20
>RF00906;MIR1122;AACV01007135.1/5538-5693 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 35 tttatagtacaacgaatctggacaga 60
|||||||||||||||||||| |||||
Sbjct: 105 tttatagtacaacgaatctgaacaga 80
>RF00906;MIR1122;AAAA02005017.1/19879-19742 39946:Oryza sativa
Indica Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tagtacaacgaatctggacaga 60
||||||||||||||||||||||
Sbjct: 58 tagtacaacgaatctggacaga 79
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 21 accggatgtgacactttatagtacaacgaatctggaca 58
|||||||||||||| || |||||| | |||||||||||
Sbjct: 79 accggatgtgacacattttagtactatgaatctggaca 42
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 24 ggatgtgacactttatagtacaacgaatctggac 57
||||||||||| | |||||||||||||||||||
Sbjct: 91 ggatgtgacacatcctagtacaacgaatctggac 58
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 25 gatgtgacactttatagtacaacgaatctggacagaaa 62
|||||||||| | ||||||||||||| ||||||||||
Sbjct: 80 gatgtgacacatcctagtacaacgaatttggacagaaa 43
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tagtacaacgaatctggacaga 60
||||||||||||||||||||||
Sbjct: 56 tagtacaacgaatctggacaga 77
